>input_sequence_49952
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--------ATGGAGGCACCTTGCGA------CTATCAGCTGGCCGTGGCTGATTACTGGGACGGGAAGCCGGCCATGGAA
CCAACCGTCTGGGTTCCTGGCCTCTCTTTGCAGATGACAGTTGCTGCTCCGGCAAGCAACAGTGATCTCGTCGTCACCTC
CAGCGGACGGCAGCAGCTGAAGCAGGTTGATGAATACGACCA------------------CTATGCGGTTCAAGTGTTCG
AGCGAGCAGCAGAATCACTCAAGTCGAGAGTGGAGGAGATGGACACGAAGATGCACCTGTTCCCGCCAAGCATGGGAGAC
CTCGCCGACGAGTACGCCGCCCCCAAGGTGGTGTCCATCGGCCCCTACCACCACGGCCGGACCCCGGCGCTCCAGGAGAT
GGAGAGCGTCAAGCACGCGGCGGCCTGCCACTTCGTCAAGGCCACGGGCCGCCCCATCCAGGAGGTGTACTGGGCGGTCT
GCACCGTCGCAGAGGAGGCCCGCGCCCACTACGACGCCGGCAAGCTGCGGGGCCTCGGCGACGACGACTTCAAGCCGATG
ATGTTCCTCGACGGCTGCTTCCTGCTGCAGTACATGCAGTTTTGGTGCCGAGAGAGCGG------CGGC---GACGAGGA
CCCGGACA------TGG------ATCCGTCGCTTTACAACGCTTTCAGCTCCATCGACCGCCCCATCCTGAGTGACGTGG
TGCTGCTCGAGAACCAGCTGCCATGGGTGGTGATTGACGCGCTCTTGAGCTTCTTGCCCCAGCCTGGCCTGGACATGGAG
ACGCTCATCGGGCGCGTGAAGCAGACTC---TGCAGACCCGCCAG-GTTCGTTATTTCGATGCTCCCACGTTGG---A--
----CTACACACCGCCGCATCTCCTTGGCCTCCTACGCCACCACATCGTAGGAAGCAACGACACCAAGAAGT--------
-------------CCGAGC---CGG---AACTGTCTGAAAGAGCCAAGGAATTGTCCGTTTCCGTGAGCGCCATGGAGCT
TGCAGAGATCGGCATCGAGATCACAGCCACCAAAGCTACACGAGAGGGCGCAGAGCTAAGGAATATGGGCGTCCGTAGAT
CGGC---GTACCTCACCGGCGAGCTCTTCTTGGCGCCACTGTCCCTCAACGACGCGAACGCGACCTTCCTGGTCAACATG
GCGGCTCTGGAGCAATGCACGACCCCAGACTTTTTTGGGGAGGACGAGGAGAAGTCCGCCGTGTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAGGAAGACGTGCAGCAGCTTCGGAAGAAGGGCATCTTGCAGGGAGGAGCAGGGCTGA
GCAACAAGGACGCGCTCGACTTGCTTAACAAGCTCGAGAACCGGCTGCGGCCCGGAACCCACTATCTGAGCACCATGATC
CTCATCCAGAACTACAAGACTGATAGGTGGAAGCGGATCCAGTTTCACAAGTTTCATTACAACCACCGCAAAGCCATCTT
CTTGACGTTTTCCGGCATTGCTGGATTTGCCAGTTTCCTCGGGACGCTCAAGTCTCTCAATCTCAAGTAA----------
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>chr2A_1_TraesCS2A01G426400
TAGGTGCAGGCCAAGCCTTGGTCCAAGCCGCCTCAAGGCATGGACTGCCCTCTCGATAGCCGTCACATTTGTGGATGAAA
TAGGGGAGGCCAGTGCTGACATGATACTAAGGAAACCCAACGGATCAATTATTTTCTCAGCATATAGATATCTATTTGAT
TGCAAGGATGTCCTAGAAGCTGAAATAAGTACAATCTTAGAAGGACTGTCTTTGAGTTTAAAATTTTACCTTTCCGTAAA
ACAGCCAGTGCGTGTCTACATGCTTATATCTTAATTTGTGTGTTCATGCATGATTTGTTAGGCGTACTTTTTCGTAAAAA
ATATCTTTTTCGTTTCTACATGCTTATATCTTTGTGTGTGCATGC-TGATTGGTTAGGCGTACACTGTTATA----ACCA
CGTCGGCCTCCAAA-------GAGCCTATTCACGGCGGTTTGCATGTTGCTCTCGCTCTGGCCACTTTCCTATAGTATTG
TACTCCTAATACCTTAATCATCGAAAAGTTGAAAGGTTCCTCCAGTC--TGTC--GCATGTTGAAGAAGTTGAAAAGGTT
CCTCTGT----TATGCAACATGCATATATGTTAGTAATATATATTATGTTTGC---CTTGATGAGGCAAGCATGTGACGG
CAGGCTGCGTGTTTTGTCCTGATCGAACATGTGTCTAGCAATTAGCAATGGCATCCGCCGTCCGGC-GGATCGTCAATTC
TGTGTTTTTTTTTTCATT--------TATG--------------------------------------------------
---------TACGGTTGAGTTAATTTTGAACGAGAGTAGGAAATAATTAGGACAGAGAGAAAGCTACTCGAGGCCAGCAG
CTGGTCTATAAAGATAAGCGGCATATC-----------ATTGATGTAGTTTTGC--------TTATCAACTCCTTTC-TT
CTCTTTCCAGTCTCT----GCTAGCTAGGACATTTGTTTTGTGCTACATGTCTCTCAGATTCTCCCACGATACCAGTACC
AGCAGTGTACG--TAGTTTT--TGTAGTTAGCACTTAGCAGTAGCAATAGCAAGCATCCAGAT---------CTCTTAGC
TTGCTAACATGGAGGCACCTTGCGA------CTATCAGCTGGCCGTGGCTGATTACTGGGACGGGAAGCCGGCCATGGAA
CCAACCGTCTGGGTTCCTGGCCTCTCTTTGCAGATGACAGTTGCTGCTCCGGCAAGCAACAGTGATCTCGTCGTCACCTC
CAGCGGACGGCAGCAGCTGAAGCAGGTTGATGAATACGACCA------------------CTATGCGGTTCAAGTGTTCG
AGCGAGCAGCAGAATCACTCAAGTCGAGAGTGGAGGAGATGGACACGAAGATGCACCTGTTCCCGCCAAGCATGGGAGAC
CTCGCCGACGAGTACGCCGCCCCCAAGGTGGTGTCCATCGGCCCCTACCACCACGGCCGGACCCCGGCGCTCCAGGAGAT
GGAGAGCGTCAAGCACGCGGCGGCCTGCCACTTCGTCAAGGCCACGGGCCGCCCCATCCAGGAGGTGTACTGGGCGGTCT
GCACCGTCGCAGAGGAGGCCCGCGCCCACTACGACGCCGGCAAGCTGCGGGGCCTCGGCGACGACGACTTCAAGCCGATG
ATGTTCCTCGACGGCTGCTTCCTGCTGCAGTACATGCAGTTTTGGTGCCGAGAGAGCGG------CGGC---GACGAGGA
CCCGGACA------TGG------ATCCGTCGCTTTACAACGCTTTCAGCTCCATCGACCGCCCCATCCTGAGTGACGTGG
TGCTGCTCGAGAACCAGCTGCCATGGGTGGTGATTGACGCGCTCTTGAGCTTCTTGCCCCAGCCTGGCCTGGACATGGAG
ACGCTCATCGGGCGCGTGAAGCAGACTC---TGCAGACCCGCCAG-GTTCGTTATTTCGATGCTCCCACGTTGG---A--
----CTACACACCGCCGCATCTCCTTGGCCTCCTACGCCACCACATCGTAGGAAGCAACGACACCAAGAAGT--------
-------------CCGAGC---CGG---AACTGTCTGAAAGAGCCAAGGAATTGTCCGTTTCCGTGAGCGCCATGGAGCT
TGCAGAGATCGGCATCGAGATCACAGCCACCAAAGCTACACGAGAGGGCGCAGAGCTAAGGAATATGGGCGTCCGTAGAT
CGGC---GTACCTCACCGGCGAGCTCTTCTTGGCGCCACTGTCCCTCAACGACGCGAACGCGACCTTCCTGGTCAACATG
GCGGCTCTGGAGCAATGCACGACCCCAGACTTTTTTGGGGAGGACGAGGAGAAGTCCGCCGTGTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAGGAAGACGTGCAGCAGCTTCGGAAGAAGGGCATCTTGCAGGGAGGAGCAGGGCTGA
GCAACAAGGACGCGCTCGACTTGCTTAACAAGCTCGAGAACCGGCTGCGGCCCGGAACCCACTATCTGAGCACCATGATC
CTCATCCAGAACTACAAGACTGATAGGTGGAAGCGGATCCAGTTTCACAAGTTTCATTACAACCACCGCAAAGCCATCTT
CTTGACGTTTTCCGGCATTGCTGGATTTGCCAGTTTCCTCGGGACGCTCAAGTCTCTCAATCTCAAGTAATTCTTGCTCT
AGTTCCAACTGCTGAATATTTAGCTATGGTGCTAAATATTTCCTTTATGTATTTTGCGCCCATCTTGTAAACAATATTTG
TATCGGTTTTGCTAAACATGAGGTGCCTGAATTTCTTGGTGGCGCCAGTCACTTTTTGCAAAGCGCAATGTGAGGCCGGA
GATGGGGATGGCGTGAGGAGCACCTGCGACAAGCGCCGGCCATGGCGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCA
AGGCGGCGATAACCATCGGCCGCGAGGTGTGGAGTCAGGCGGTTAGGGCTGGGTAGGCCACAGGGAAGGAGGAGGAACCG
TCTTGGGGGAAGGGGGGGGGGAGATGCAGGAGAAAAAGATAAAGAGTTGGCGGCGCGCTCCTAGCCATTGGATGCTGATC
GGATGGTCCATAGAGAAAATGACTCTGCAGATGTTTTTTCGGATACATGACCTATAGATGGCCCCAATTTGTATTCGTCA
ATGCGAAGGGCTCTGATATAACTCCCTTGTGAGCCAAATTTATGGTAGTAGTTATTGCATATCGCTTGAGTAGCAAAAAA
CAACAACAACAACAAGTGTGATTGTTTCATTCATATATACGGAGGTCTCCATAATATCTAAGGGCTCGTAATGTTCCAAG
ATTGGTGGAGAGAGTTGGTAGCTCACTTCC
>chr2B_336
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---------------CTACATGCTTATATCTTTGTGTGTGCATGCATGATTGGTT---------------------ACCA
CGTCGGCCTGCAAACTCCGTTGAGGCTATTCATGCCGGTTTGCATGTCGAACTCGCTCTGGGCACTTTCCTATTAGTA--
-----CTAATACCATAATCATCAAAAAGTTGAAAGGTTCCTCCAGTCTGTGTC--GCAAGTTGAAGAAGTTGAAAAGGTT
--------------------------------------------TATCGTTAGCTGCTTGATGATGCATGCATGTGACGG
CAGGGTGCGTGTTTTGTCCTGATCGAACATGTCTCTA-CAATTAGCAATGGCATCCGCCGTCCGGCCGGATCGTCAATTC
TGT-TTTTTTTTTTCATTTATGTACTCTCTTCTCAAACTAATATAAAAGCATGTGATCTATACGCTCTTATGTTAGTTTA
TAGAGGGAGTAGGGTTGAGTTAATTTTCAACGAG--TAGGAAAAAATTAGGACAGAGAGAAAGCTACTCGAGGCCAGCAG
TTGGTCTATAATGATAAGCCGCATATC-----------ATTGATGTAGTTTTGC--------TTATCAACTCATTTC-TT
CTCTTTCCAGTCTCTGCTAGCTAGCTAGGACATTTGTTTTG---TACATGTCTCTCAGATTCTCCCACGATACCAGTACC
AGCATTGTACG--TAGTTTT--TGTAGTTAGCA-------------GTAGCAACCATCCAGAT---------CTCTTAGC
TTGCTAACATGGAGGCACCTTGCGA------CTATCAGCTAGCCGTGGCTGATTACTGGGACGGGAGGCCGGCCATGGAA
CCAACCGTCTGGGTTCCTGGCCTCCCGTTGCAGATGACAGTTGCTGCTCCT---AGCAACAGCGATCTGGTGGTCAGCTC
CAGCGGACGGCAGCAGCTGAAGCTGGTTGATGAATACGATCA------------------GTATGCGGTTCAAGTGTTCG
AGCGAGCAGCAGAATCACTCAAGGAGAGAGTGGAGGAGATGGAGACGAAGATGCACCTGTTCCCGCCAAGCATGGGAGAC
CTCGCCGACCACTACGCCGCCCCCAAGGTGGTGTCCATCGGCCCTTACCACCACGGCCGGACCACGGCGCTCCAGGAGAT
GGAGAGCGTCAAGCATGCGGCCGCCTGTCACTTCGTCAAGGCCACGGGCCGCCCCATCCAGGAGGTGTACTGGGCGGTCT
GCACAGTCGCAGAGGAGGCCCGCGCCCACTACGACGCCGGCAAGCTGCGGGGTCTCGGCGACGACGACTTCAAGCCGATG
ATGTTCCTCGACGGCTGCTTCCTGCTGCAGTACATGCAGTTTTGGTGCAGAGAAAGCGG------CGGC---GACGAGGA
CCCGGACA------TGG------ATCCGTCGCTGTACAACGCTTTCAGCTCCATCGACCGCCCCATCCTGAGTGACGTGG
TGCTGCTTGAGAACCAGCTGCCATGGGTAGTGATTGACGCGCTCTTGAGCTTCTTGCCCCCGCCTGGCCTGGACATGGAG
ACGCTCATCGGGCGCGTGAAACAGACTC---TGCAAACCCGCCAG-GTTCGTTATTTTGATGCTCCCACATTGG---A--
----CTACAAACCGCCGCATCTCCTTGGCCTCCTACGGCACCACATTGTAGGAAGCAATGACACCAAGAAGT--------
-------------CAGAGC---CGG---AGCTATCTGAAAGAGCCAAGGAATTGTCCGTTTCCGTGAGCGCCATGGAGCT
TGCAGAGATCGGCATCGAGATCACGGCCACCAAAGCTACCCGAGAGGGCGCCGAGCTAAGGAATATGGGCGTCCGGAGAT
CAGC---GTACCTCACCGGCGAGCTCTTCTTGGCGCCACTGTCGCTAAACGACGCGAACGCGACCTTCCTCGTCAACATG
GCGGCTCTGGAGCAGTGCACGACCCCAGACTTCTTTGGGGAGGACGAGGAGAAGTCTGCCGTCTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAGGAGGATGTGCAGCAGCTGCGGAAGAAGGGCATCTTGCAGGGAGGAGCAGGGCTCA
GCAACAGGGACGCGCTCGACTTGCTCAACAAGCTCGAGAACCGGCTGCGGCCCGGAACCCACTATCTGAGCACCATGATC
CTCATCCAGAACTACAAGACCGATAGGTGGAAGCGGATCCAGTTTCACAAGTTTCATTACAACCACCGCAAAGCCATCTT
CTTGACGTTCTCCGGCATTGCTGGATTTGCCAGTTTCCTCGGGACGCTCAAGTCTCTCAA------GTAATTCTTGCTCT
TGTTCCAACTGCTGAATATTTAGCTATGGTGCTAAATATTTCCTTTATGTATTTTGCGCCCATCTTGTAAACAATATTTG
TATCGGTTTTGCTGAATATGAGGTGCCTGGA-TTTTTGCTGGTGTCAGTCGCTTTTTGCAAAGTGCAACGCGAGGCCGAA
GGCGGGGATGGCACGAGGAGCGCCAACAAGAAGCGCCGGCTACGGCGAGG------------------------------
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>chr2D_373
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-----------------------------------------------------TTAGGCGTACACTGGTATATATAACCA
CGTCGGCCTCCAAA-------GAGGTTATTCACGCCGGTTTGCATGTTGCTCTCGCTGTGGCCACTTTCCTATAGTACTG
TACTGCTAATACCTTAGTCATCGAAAAGTTGAGAGGTTCCTCCAGTC--TGTC--GCATGTTGAAGAAGTTGAAAAGGTT
CCTCTGTACGTTAAGCAACATGCATATATGGTAGTA--ATATATTATGTTTAC---CTTGATGAGGCAAGCATGTGACGG
CAGGCTGCGTGTTTTGTCCTGATCGAACATGTCCCTAGCAATTAGCAATGGCATCCG---TCCGGCCGGATCATCATTTC
GTC-TTTATTTTATTCTTTTCATTTATATA--------------------------------------------------
---------TACGGTTGAGTTAATCTTGAACGAG--TAAGAAAAAATTAGGACAGAGAGAAAGCTACTC-AGGCCAGTAG
TTGGTCTATAAAGAGGAGCGGCATATC-----------ACTGATGTAGTTTTGGACTTTTGGTTACCAACTCCTCCTCT-
---TTTCTAGTCTCTGCT------CTAGGACATTTGTGCTG---TACATGTCTCTGACATTCTCCCACGATACCACTACC
AGCAGTGTACG--TAGTTTTTTTGTAGTTAGCA-------------GTAGCAACCATCCAGATCCAGTACTTCTCTTAGC
TTGCTAACATGGAGGCACCTTGCGA------CTATCAGCTGGCCGTGGCTGATTACTGGGACGGGAGGCCGGCCATGGAG
CCAACTGCATGGGTTGCTGGCCTCCCGTTGCAGATGACAGTTGCTGCTCCT---AGCAACAGCGATCTGGTGGTCAGCTC
CAGCGGACGGCAGCAGCTGAAGCAGGTTGATGAATACGACCA------------------CTATGCGGTTCAAGTGTTCG
AGCAAGCAGCAGAATCACTCAAGGAGAGAGTGGAGGAGATGGAGACAAAGATGCACCTGTTCCCGCCAAGCATGGGGGAC
CTCGCCGACGAGTACGCCGCCCCCAAGGTGGTGTCCATCGGCCCCTACCACCACGGCCGGACCCCGGCGCTCCAGGAGAT
GGAGAGCGTCAAGCACGCGGCCGCCTGCCACTTCGTCAAGGCCACGGGCCGCCCCATCCAGGAGGTGTACTGGGCGGTCT
GCACGGTCGCAGAGGAGGCCCGCGCCCACTACGACGCCGGCAGGCTGGGGGCTCTCGGCGACGACGACTTCAAGCCGATG
ATGTTCCTCGACGGCTGCTTCCTGCTGCAGTACATGCAGTTTTGGTGCAGAGAGAGCGG------CGGC---GACGAGGA
CCCGGACA------TGG------ATCCGTCGCTGTACAACGCTTTCAGCTCCATCGACCGCCCCATCTTGAGTGACGTGG
TGCTGCTTGAGAACCAGCTGCCATGGGTGGTGATTGACGCGCTCTTGAGCTTCTTGCCCCCGCCTGGCCTGGACATGGAG
ACGCTCATCGGGCGCGTGAAGCAGACTC---TTCAGACCCGCCAG-GTTCGTTATTTCGATGCTCCCAAGTTGG---A--
----CCACACACCGCCGCATCTCCTTGGCCTCCTACGACACCACATCGTAGGAAGCAATGATACCAAGAAGT--------
-------------CCGAGC---CGG---AGCTGTCTGAAAGAGCCAAGGAGTTGTCCGTTTCCGTCAGCGCCATGGAGCT
TGCAGAGATCGGCATCGAGATCACAGCCACCAAAGCTACCCGAGAGGGCGCGGAGCTAAGGAATATGGGCGTCCGTAGAT
CGGC---GTACCTGACCGGCGAGCTCTTCTTGGCGCCACTGTCCCTCAACGATGCGAACGCGACCTTCCTGGTCAACATG
GCGGCTCTGGAGCAATGCACCACCCCAGACTTTTTCGGGGAGGACGAGGAGAAGTCTGCCGTGTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAAGAGGATGTGCAGCAGCTGCGCAAGAAGGGCATCTTGCAGGGAGGAGCAGGGCTGA
GCAACAGGGACGCGCTCGACTTGCTCAACAAGCTCGAGAACCGGCTGCGGCCCGGAACCCACTATCTGAGCACCATGATC
CTCATTCAGAACTACAAGACCGATAGGTGGAAACGGATCCAGTTTCACAAGTTTCATTACAACCACCGGAAAGCCATCTT
CTTGACGTTCTCCGGTGTTGCTGGATTTGCCAGTTTCCTCGGGACGCTCAAGTCGCTCAA--------------------
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>chr2D_480
CCTTAATC------------------------------------------------------------------------
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----------------ATCATGAACAAGTTGAAAGGTTCCTCCAGGC--TGTGTTGCATGTTGAAGAAGTTGAAAAGGTT
CCTCTCT----TATGCAGGCATGCAC------------ATATATTATGGTTACCTGGTTGATGAGGCATGCATGTGAATG
CCGGCTGTGTGTTTTGTCCCGATCGAACATGTCTCTAGCAATGGT-----------G---TCTGGCCGGGCCATCATTCC
CTTCC-----TTTCCATT--------TATA--------------------------------------------------
---------TACGGTTGCGTTAATCTTGAACGAA--TAAGAAAAA--TAAAACACACAGAAAACTACGC-GTGGCTG--G
CTGGCCTATAAAGAGGAGCGACGTCTTCGGAGAGGATAACCGATGTAGCTTCGG--------TTCTCAACTCCTGTTTTT
CTCTTTTCAGTCTCTGCTATAGCCTATAAGGCA----TTTG---TACATGTTTCTATTTTGAA--------------ACC
AGCAGTGTAATTTTAGTTGTTGGCAACTTAGCA-------------ATAGCATCCATCCAG------TAGTTGTCTTGGT
TTGTTAACATGCAGGTACCTTACGACTATCAGTATCAGCTGGCCGTGGCTGACTACTGGGAGGGGAGGGCGACCATGGAA
CCAAATGTATGGGTTCCTGCGCTCCCTTTGCAGATGACAGTTGCTGCTCCTGCTAGCAACACTGATCTGGTCGTCAGCTC
CAGCGAACAGCAGGAGCTGAAGCTGGTCGAGAAGGGTACTGATTATCAGTATGAGTGCAGCAATCCTATTGAAGACTTCG
AGAAAGCAGCACGAGCATTTGAGGATAATCTTCAGCAGATGGAAACGAAGATGCACCTGTTCCCTCCAAGCATGGAAGAA
CTCTCCAAGTACTCCAAA---CCCAAGGTGGTGTCCATCGGTCCGTACCACCACGGCTCGAACGAAGCCATCCAGCAGAT
GGAGAGCACCAAGTACGCGGCCGCCTGCCACTTCATCAAGGAATCGCGGCGCCCCGTTGAGGAGGTGTATGGGGCGGTCT
TCGCGGTGGCCGTTGAAGCCCGCAGCTACTACGACGCGGACAGGCTGCGGGATCTCAGCGACAACGACTTCAAGCCTATG
ATGTTCTATGATGGCTGCTTCCTGCTGCAGTATATGCTATTTTTGTGCAGAGACAACGG------CGAC---GAAGAGAA
GCCGACAGCTGAGGTGG------ATCAGTGGCTGTACAATGCTTTCAGCTCCATCGACCGCCGCATCTTCAGTGACATTG
TGCTGCTTGAGAACCAGCTCCCCTGGGTGGTGGTTCAAAAGCTCAAGGACTTCATGCCCCGGCCTGGCCTGGACATGGAA
ACGGTCCTTGGACGCGTGAAACATTCTC---TGCAAGCGCGGCGG-CATCTTAAATTCGATGCTCCTAAATTGG---ACG
ATAGCTACGTACCGCCGCATCTCCTTGGCTACCTACGATTCTATATTGTAGGAAGCACCGACGACACTAGTAGTACTAGT
CGTACCCCAGTGCCCGAGA---TCA---CCTTATCTGAAAAGGTCAAGAAACTATCAATGTCTGTCAGCGTCATCGAGCT
TGCAGAGATGGGCATCAAGCTCAGAGCCGACGATGCTAC---------AGCAGAGCTAAAGAAGATGCGCATCACCAACG
A------GTGGTTCACCGGCAAGCTCTTCTTGCCTCCAGTGTCCCTCGACGATGCCAACGCACGGTTCCTCGTCAACATG
GCAGCTTTGGAACTGTGCATCACCCCAGATTTCCGTGTAGCTCATGATACACGGTCTACTGTCTGCTCCTACCTCAGCCT
TCTGGGGATGGTCACCGACAATGATACTGATGTGCAGGAGCTGCGAAATAAGCTTATACTGCAAGGAGGAGGAGGCCTCA
CCAACGGGGACGCACTCAAGCTGTTCACCGGGCTTGAGAAGTACCTGCGCCCCGGGAACTGCTATGACAACATCATTATA
GCGATTGAAAACTACAGGTCCCATAGGCGGTTGCGGATCAAGGTGTACAGGTTCTGTTACAGGAACCGCACGGCCATCAT
CGCCACGGTGTCCGCCATTGCTGGACTTGCAGGTTTCCTCGGGACGCTCAAGTCT-------------------------
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>chr2A_979
CCAG----------------------------------------------------------------------------
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-----------------------------------------------------------------------TCTCTTAGT
TTGTTAACATGGAGGTACCTTACGA------GTATCAGCTGGCATTGGCTGATTACTGGGAGGGGAGGCCGACCACGGAA
CCAAATGTATGGGTTCCTGGCCTCCCTTTGCAGATGACAGTTGCTGCTCCTGCTAGCAACAGTGATCTGGTGGTCAGCTC
TACTGGACAGCAGCAGCTGGTTCAGG------AGAGTACTCATCATCAGCACGCGGTTGAAGTTGAACT---AGTGTTCA
ATGAAGTAACACAGTCACTCAAGCAGACGGTGGACAATATGGCAATGAAGATGCACCTGTTCCCGCCAAACATGGAAGAT
CTGGCCTCGTACAAG---GCCCCCAAGGTGGTGTCCATCGGCCCTTATCACCACGGCGAGAGCGAAGCCCTCAAGCAGAT
GGAGAGCATCAAGCATGCGGCCGCCGTCCACTTCATCGACAACACGGGCTGCTCCATCCAGGAGGTGTATGGGGCGGTCT
GCGCGGTCGCGGAGGTGGCCCGCGGGCACTACGAGGAGGACAAGATGCGAACTGCCAGCGACGACGACTTCAAGCACATG
CTGTTCTTTGATGGCTGTTTCCTGCTGCAGTATATGTTGTTTTGGTGCAGAAGAGTAAACGAAGACGAT---GATGACGA
GACCACCGTGGATGTGG------ACCCGTCGTTGCATAGTGTTTTCAGCTCCAACGACAGCCGCATCTTCTGTGACGTCG
TGCTGCTTGAGAACCAACTCCCCTGGGTGGTGGTTGACACGCTCAAAAGGTTCATGCGCACGCC---CCCGACCATGGAG
TTGTTCGTTCGACGCGTTAAAATAGACAAAATGCATACCCGCCAA-GAGCTTGAATTTGTTCTTGCTCCACTACCTAA--
----CTACACACCGCCGCATCTCCTTGGCCTCCTACGATACCACATTGTAGGAAATACTAA-------------------
--------AGTGCCCGAGC---CCAGCCCCTTATCTGACAAGGTCAAGGAAGTATCATGGTCTGTCGGCGTCATTGAACT
TGCAGAGATTGGCATTGAGGTCACACCCAACGATATTAA---------AGAAGACCTAAAGAAGATGTACATCGACAGAG
G------GTGCTTCACCGGCGAGCTCAGGTTGGCGTCGGTGTCCCTAGGCAACGCAACCGCAACCTTCCTCGTCAACATG
GCGGTTTTCGAGATGTGCACGACCCCTGATTTTGATCAAGATGATGATGAAATGTCTACTGTCTGCTCGTACCTCTGGCT
CCTGGGCATGGTTACGGACAGCGTGAGTGATGTGCAGGAGCTACGAAACAAGCATATCTTGGAAGGAGGAGCAGGGCTCA
CCAACGAGGACGTGCTC---------------------------------------------------------------
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>chr2D_1246
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-------------------------------------GACGGAGACGAAGATCCACCTGTTCCCGGCGAGCATGGTGGAC
CTCGCTGAGCGCTACGCCGCGCCCAGGACCGTCTCCATCGGCCCCTACCACCACGGCCGGAGCCACGCCGTCCTTCAGAT
GGAGAGCACCAAGCACGTGGCCTCCTGGCACTTCGTCAGGGCCTCGGGCCGCTCCGTCGAGGAGGTGTACTCCGCGGTCT
GCGCCGTCGCCGACGAGGCCCGCGGCTGCTACGACGAGGAAAGGGTGCGGGGTCTCGCTGACGACGACTTCAAGCCCATG
ATGTTCTTCGACGGCTGCTTCCTGCTGCAGTACCTGCTGTACGCGTCCACGTACGGCGG------CGAC---GACGAGGA
CGAGGGGA------TGGCAGTAGACCCGGCGCTGAGGAGCGCCTTCAGCTCCGACTCCGACCGCATCTTCTCCGACGTCG
TGCTGCTCGAGAACCAGCTCCCGTGGGTGGTGGTCGAGACGCTCATGAGCTTCGCGCCCGCGCCCGGCCTGGACCTGCCG
AAGCTCGTCGGACGCGTGAAAGGCTCCC---TGCAGGCCCGCAGG-CCCTCGACGAGAAAC-CTCCTGCTTGGG---ACA
GCAGCTACACGCCGCCGCACCTGCTCGGCCTCCTACGGTACTACATCGTCGGAACCGGAACCAAGCTCTCGT--------
-------------CCGAGTCCTCCCGCGGCCTATCCGAGAAGGCCGAGAAGGTGTCCATCTCCGTGAGCGCCGTGGAGCT
CGCGGAGATGGGCATCCAGCTGACGGCCACCAAGAC---------GGGGGCGGAGCTGAAGGAGATGGGCGTCAGGAAGG
G------GCTGCTCTCCGGCGAGCTCTTCCTGGCGCCGCTGTCCCTGGACGACGCGAACGCCGGGTTCCTCGTCAACATG
GCGGCGCTGGAGCTGTGCACGACGCCGGACTTCTCCGAGGCCGGCGAGGAGCGGTCCACCGTGTGCTCGTACCTCTGCCT
GCTGGGCATGGTGACGGACCGCGTGGAGGACGTGCAGGAGCTGCGCACGAATCACATCTTGCAGGGGGGAGCGGGGCTGA
CCAACGAGGACGCGCTCCGCCTCTTCATCAGCCTCGAGAAGCACCTGCGGCCCGGGAGATGCTACCTCCGCACCATGCTG
GACATCGAGAACTACA----------------------------------------------------------------
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>chr2B_1246
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-------------------------------------GACGGAGACGAAGATCCACCTGTTCCCGGCGAGCATGGTGGAC
CTCGCCGAGCGGTACGCCGCGTCCAGGACCGTCTCCATCGGCCCCTACCACCACGGCCGGAGCCCCGCCGTCCTGCAGAT
GGAGAGCACCAAGCACGTGGCCTCCTGGCACTTCGTCAGGGCCTCCGGCCGCCCCGTCGAGGAGCTGTACTCCGCGGTCT
GCGCCGTCGCCGACGAGGCCCGCGGCTGCTACGACGAGGGCAGGGTGCGTGGTCTCGCTGACGACGACTTCAAGCCCATG
ATGTTCTTCGACGGCTGCTTCCTGCTGCAGTACCTGCTGTACGCGTGCACGTACGGCGA------CGACAACGACGACGA
CGAGGGGA------TGGCAGTAGACCAGGCGCTGAGGAGCGCCTTCAGCTCCGACAACGACCGCATCTTCTCCGACGTGG
TGCTGCTCGAGAACCAGCTCCCGTGGGTGGTGGTCGAGACGCTCATGAGCTTCTTGCCCGCGCCCGGTCTGGACCTGCCG
AAGCTCGTCGGACGCGTGAAAGGCTCCC---TGCAGGCCCGGCAGGCCCTCGACGAGAAAC-CGCCCGCGTGGG---ACA
GCAGCTACACGCCGCCGCACCTCCTCGGCCTCCTGCGGTACTACATCGTCGGAACCGGCACCAAGCTCTCGC--------
-------------CCGAGTCCTCCCGCGGCCTATCCGAGAAGGCCGAGAAGGTGTCCATCTCCGTGAGCGCCGTGGAGCT
CGCGGAGATGGGCATCCAGCTGACGGCCACCAAGAC---------GGGGGCGGAGCTGAAGGAGATGGGCGTCAAGAAGG
G------GCTCCTCTCCGGCGAGCTCTTCCTGGCGCCGCTGTCCCTGGACGACGCGAACGCTTGGTTCCTCGTCAACATG
GCGGCGCTGGAGCTGTGCACGACGCCGGACTTCTCCGAGGCCGACGACGAGCGGTCCACCGTGTGCTCGTACCTCTGCCT
GCTGGGCATGGTGACGGACCGCGTGGAGGACGTGCAGCAGCTGCGCACGAATCACATCTTGCAGGGGGGAGCGGGGCTGA
CCAACGAGGACGCGCTCCGCCTCTTCATCAGCCTCGAGAAGCACCTGCGCCCCGG-------------------------
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>chr2A_1819
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----CTACACGCCGCTGCATCTTCTTGAGCTCCTGCGATACTACATCGTAGGGAGCACCACCGAGACGCCGG--------
-------------CCGAGC---CCG---ACCTTCATAAAAATGCAGAGAAGATATCGATTTCCGTCAGTGCCATGGAGCT
TGCGGAGATCGGCATCGAGATCACGGCCACCAAGCCTAC---------GGCAGATCTGAAGGAAATGGGCGTCAATGATA
AGC---CGCTCCTCACCGGCGAGCTTTTGCTGGCGCCACTGTCCCTGGACGATGCAAACGCGAGCTTCCTCGTCAACATG
GCGGTTCTGGAGCTATGCACGACCCCAGACTTTTCTGTAGAGGTCGAGGAGAAGTCTGCTGTGTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAGGAGGACGTGCAGCAGCTGCGGAAGAAGGGTATCTTGCTGGGAGGTGCAGGGCTGA
GCAACAAGGACGCGCTGGAACTGCTCAACAGGGTGGAGAACCGGCTGCGACCCGGAACCCACTATATGAGGACCATGGTG
CTCATCGAGAACTACAGGAAGAAGAGGCCGAGACGGATCAAGTTTCACAAGTTCCATTACAACTATCGTAAAGCCATCAT
CTTGACGTTGTCCGGCATTGCTGGACTTGCCAGCTTCCTCGGGGCGCTCAAGTCTCTCAA-CTCAAGTAA----------
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------------------------------
>chr2D_1819
--------------------------------------------------------------------------------
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----CTACACGCCGCCGCATCTTCTCGAGCTCCTGC-----TACATCGTAGGAAGCACTACCGAGACGCCGG--------
-------------CCGAGC---CGG---ATGTTCATAAAAAAGCGGAGAAGATATCGATTTCCGTCGGTGCCAGCGAGCT
CGCGGAGATCGGGATCGAGATCACGGCCACCAAGCCTAC---------GGCAGATCTGAAGGATATGGGCGTCAAAAAGA
AAAGGTCGCTCCTCACCGGTGAGCTTTTCCTGGCGCCACTGTCCCTGGACGATGCAAACGCGAGCTTCCTCGTCAACATG
GCGGTTCTGGAGCTATGCACGACCC--GACTTTTCTGAAGTGGTGGAGGAGAAGTCAGCTGTCTGCTCCTACCTCTGCCT
CCTGGGCATGGTGACGGACAGCGAGGAGGACGTGCAGCAGCTGCGGAAGAAGGGTATCTTGCTGGGAGGTGCAGGCCTCA
GCAACAAGGACGCGCTGGAACTGCTCAACAGGGTGGAGAACCGGCTGCGCTCCGGAACCCACTATCTGAGGACCATGGTG
CTCATCGAGAACTACAGGAAGGAGAGGCCGAGGCGGATCAAGTTTCACAAGTTCCATTACAACTACCGCAAAGCCATCAT
CTTGACCTTGTCTGGCATTGCTGGACTTGCCAGCTTCCTCGGGGCGCTCAAGTCTCTCAA--------------------
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------------------------------
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----------------------------------------------------S------------
------------------------S---------S------------------------------------------S--
----S---------------------------------------------------------------------------
------------------------------S-----SS-------------S----------------------------
--------------------------------S-----------------------------------------------
---S-------------------------S--------------------------------------------------
----------------------------------SS-------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------SSS------------------------------------
---------------------------------SSSSSSSSSSSSS-------S--------------------------
------------------------------------------------------------------S-------------
------------------------S-------------------------S--S--------------S-------S---
--------------------------------------------------------------------------------
-----------------------SS------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----------------------------------------------------S---------------------------
------------------------------------------------S-------------------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------------S--------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--------------S-------------------------------------
-------------------------S------------------------------------------------------
--------------------S-----------------------------------------------------------
---------S--------------------------------------------------S-------------------
S-------------------------------------------------------------------------------
-------------S--S------------S-S--S---S---S-S-----S------------S----S-S-------S-
-SS---------SS-------S--SS-S-S----------S-S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_258
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------------------------------------------------------------------------------AA
ACAGCCAGTGCGTGTCTA--------------------------------------------------------------
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------------------------------
>reverse_2038
--------------------------------------------------------------------------------
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-------------------------------------CCACCACATCGTAGGAAGCA-----------------------
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------------------------------
>forward_1901
--------------------------------------------------------------------------------
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-----------------------------------------CTCTTGAGCTTCTTGCCCCA-------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_3417
--------------------------------------------------------------------------------
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--------------------------------------------------------GCTCCTAGCCATTGGATGCT----
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------------------------------
