>input_sequence_49894
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----------------------------------------------ATGGAGTCGGGAGCCAGATCAGAAGCAAAGCCAG
ACGAGGAAGGGCCGGCCCCGGCGGGAAGCAGCAGC---GGCAGCAAGGTGTACCACGAGAGGCAAAGGATGCAGTTCTGC
CTCCTCCACGCCCTCAACAACCTTATGCAGGTGACCCTTCTCCTCTC-----TTGCTTAGTCGCGGTACTATGTT-----
CATGGTTCGAG--TAACTGCGCTTGAGAACTTTGCGTAATCCTAAGTTTAGTAATTGAGTCCAACAAATTAGATTCTATC
TCTCGTGCTTTCTTGTTCGCCTGATTGTTCCCATCAAAGGACATCGGCAGTCAGTCAGCACCC------------TAAGT
AGTCAGATTACTCCGCGCGAAGCTACAGATTGTTATAGTAGTGGAGCGTTGTGCTCTTGGTGAGCATGTTTTTTA----T
GCGATTGTTTCCAACTTCTCACAACTTACGCTGTGGTGAAAGATCAGGGCATATTAAG-AGTATGTACAGATCTTCCTTC
TCGGT----AGAAAGGGACAGCAATTGAGGTCACTCTATCAACTATTGGCCCATTGAGTGGGCACTGTTCGTCATTAGTT
ATGTCTGACAAGTTTATGGGTGGGTGTGGTTCACCCGTTTTGCAGCCCTCTGTCCACCGAATACAATGAAGGCTTTGCCA
GTTGTGCGCGTGAATCATGAATTGGTAGCTGATAGGGATGGAAACAAATATTTTGGTCTTTGTCAAGTTTCATAATGACG
TTTCAAATTGACGTTGACATGAATTTGGGGAACCAAGCTGTGCACGCTTGCAGCCATGTGAGTGCAAGAGGCCAAGATCG
CACGGCAATAACAAGCATTTAAGCTGCTATCTGATTGGCTTTCATTTCTTATCATCTAC---------------------
-----------------------------------------------------------TAATAATCAGTATG-AAAAAA
TATTACAATAACTTAATCCTCGGAGAGGTAACTGCTTGGCACTTTCACTCATCAACATATATACAGGTAGCATGATCTTA
CCATGCACTGCATAGGCGGTTTCTTTGCTCTGACGCCACCTTATTTAATCCGGGCTTACCATGATTGTGTTTCGTGTGGT
TCAGGAAAAAGAATCGTTCACCCGAGCTGAGCTGGATGGGATTGCTGAAAATCTTGTTCTTACTGATCCAAACAAGGAGA
GATGGACTCCTCTATCGTTGATTTGGAAGCCCCACCACAATGCATTAACAGGGAACTATGATGTAAATGTTCTTATCGCG
GCGGTAGAATCTAGAAAGAAGAAGGTAGTTTGGCATGATCATCGGAAGGGGGCATCTTCGATAGATCTGGATGCCGAAGC
GCTGGTAGGTCTGATGATCAATGTACCGGTCAGGAGGTTGAGGGGCCTGTGGACCGGGAGGCATTGGGTGGCAATTCGAA
GCATTGATGGCATCTGGTTTAATCTGGACAGCGATCTTCCGTCGGCCAAGCAGTTTCAGTGCAAAGAAAAACTAATTGCG
TTCCTGGACAGCGTTCTCAGTCAAGGCGGGGAGCTCATGATCGTGCTCCAAGACGAATGA--------------------
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>chr4D_1_TraesCS4D01G214600
GAAGCATCACAAAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTAATATTCACAATATCT-TTATCAATGTTTATATTCCAGAACTAGGTTCATGGAATTGGTATGAGATATTCTGG
AGGTTTGCAAAGTTCAGGAGGAGTAAATTCCC----TATAACCCGTTGGTGATCCTCAAATCACTCATATTGTACTCTTT
TTCTCTTTATGAGTTTTTCATGATTGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGTAGATATATGC
CATATTGGTTTCTCCTTATATTTTT-TCCGCTGGGTTTTAAAGGAGTTTTAGATGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCATAGGGTTTTTGGAGGAGTTTTCAGTTTGCAATATACATATGATGAATTGATCAAGAGGGAGTGTTGAGA
AATAAAAAATATGTAATCAATTGTATGAGAGGGATGCCTTCCAAAAGGTGTCTGTTGAAAAAGAGATGTCTCCGCAACAC
ACCCCTTCAACATGTATATAAGTGAGTCTCCCACGTTGCAATAGATCTAAGAGAATTATTTTGTGTCTCTCCTTTGTCTC
CTTTACTTTCACTCTACAACAGCTATAACAAGGCAGTGGCGCCGGGCGGTGCGAATCCCCTTTGTGTTCTTTTTTTTTCC
TTGATTGAATGCAAATCTCCTTTGTGTTCGGCTGTTTACTGTTGCGTCCACGACGATAGGCAGGCTTCCCCTCGTGGCGG
CGGCGCAGAAGCCGTGCGTCTGTTTGGTGCGGCCGTGGGATAAGGGAAGGAATCCACCGCCGTCCGGTCCGTAATCCGTG
GGGATAAAACCCAATCCCCCGCTGCCCCGGTATCAATCGCGGCAGCATGGAGTCGGGAGCCAGATCAGAAGCAAAGCCAG
ACGAGGAAGGGCCGGCCCCGGCGGGAAGCAGCAGC---GGCAGCAAGGTGTACCACGAGAGGCAAAGGATGCAGTTCTGC
CTCCTCCACGCCCTCAACAACCTTATGCAGGTGACCCTTCTCCTCTC-----TTGCTTAGTCGCGGTACTATGTT-----
CATGGTTCGAG--TAACTGCGCTTGAGAACTTTGCGTAATCCTAAGTTTAGTAATTGAGTCCAACAAATTAGATTCTATC
TCTCGTGCTTTCTTGTTCGCCTGATTGTTCCCATCAAAGGACATCGGCAGTCAGTCAGCACCC------------TAAGT
AGTCAGATTACTCCGCGCGAAGCTACAGATTGTTATAGTAGTGGAGCGTTGTGCTCTTGGTGAGCATGTTTTTTA----T
GCGATTGTTTCCAACTTCTCACAACTTACGCTGTGGTGAAAGATCAGGGCATATTAAG-AGTATGTACAGATCTTCCTTC
TCGGT----AGAAAGGGACAGCAATTGAGGTCACTCTATCAACTATTGGCCCATTGAGTGGGCACTGTTCGTCATTAGTT
ATGTCTGACAAGTTTATGGGTGGGTGTGGTTCACCCGTTTTGCAGCCCTCTGTCCACCGAATACAATGAAGGCTTTGCCA
GTTGTGCGCGTGAATCATGAATTGGTAGCTGATAGGGATGGAAACAAATATTTTGGTCTTTGTCAAGTTTCATAATGACG
TTTCAAATTGACGTTGACATGAATTTGGGGAACCAAGCTGTGCACGCTTGCAGCCATGTGAGTGCAAGAGGCCAAGATCG
CACGGCAATAACAAGCATTTAAGCTGCTATCTGATTGGCTTTCATTTCTTATCATCTAC---------------------
-----------------------------------------------------------TAATAATCAGTATG-AAAAAA
TATTACAATAACTTAATCCTCGGAGAGGTAACTGCTTGGCACTTTCACTCATCAACATATATACAGGTAGCATGATCTTA
CCATGCACTGCATAGGCGGTTTCTTTGCTCTGACGCCACCTTATTTAATCCGGGCTTACCATGATTGTGTTTCGTGTGGT
TCAGGAAAAAGAATCGTTCACCCGAGCTGAGCTGGATGGGATTGCTGAAAATCTTGTTCTTACTGATCCAAACAAGGAGA
GATGGACTCCTCTATCGTTGATTTGGAAGCCCCACCACAATGCATTAACAGGGAACTATGATGTAAATGTTCTTATCGCG
GCGGTAGAATCTAGAAAGAAGAAGGTAGTTTGGCATGATCATCGGAAGGGGGCATCTTCGATAGATCTGGATGCCGAAGC
GCTGGTAGGTCTGATGATCAATGTACCGGTCAGGAGGTTGAGGGGCCTGTGGACCGGGAGGCATTGGGTGGCAATTCGAA
GCATTGATGGCATCTGGTTTAATCTGGACAGCGATCTTCCGTCGGCCAAGCAGTTTCAGTGCAAAGAAAAACTAATTGCG
TTCCTGGACAGCGTTCTCAGTCAAGGCGGGGAGCTCATGATCGTGCTCCAAGACGAATGATTGCACTGCTTCAGATCTCG
AGAGGCTAGAGCAATTGGCTTCTCC---GTGATTTACCTGTTGCCCATATTTCTGAATTGACAATGAGATCACCTGCGTC
TGCAATAGCAGCTTCTCTGAAACTCTCA-ATCTTTGTGAGAATCATGGTGTGCCTGTAGGAGTTCAGATACATGGATGCA
TGGGATGATAGAAGTTTTCCCTTTTCTGAGA-------------------------------------------------
-----------TTGTGTATGCAGAGCTTAGGAAAGGAGAATCTGTTCCGGCAGTGTATATGCCTTTTTTTTGT------A
ACTGAAGTGTATATGCTGTGTGGAAAACTATTTTGTGTGCATTG------CGTGTACATTACATCTTGAACCATTTGGTG
TGAGTTTTA--TTTATTTTCTTGTGTGTTTCTCATGTTGGTCATGTACTGCTAAAATGATCGACAGTGGTAGAGCTGCTA
TTTAAGCCTATTAGCGCCTCTTCTGGTTGGAACTTGGAAGCAAGGC----AGTTTCGAAATCTATAACTTGT--AATCGA
ATGGGTTAATGCATTGGGAGTTTAGAGGGCCTTTGCATCAACCTTATTGAACTGCAAAAACGTCTTATATTTAAGAACAG
AGGTACTCCCTCCGTCCAAAAATAAGTGTCTTAAGCTTAGTACAATTTTATACAAAAGGTGGTACAAAGTTGAGACACTT
ATTTTTGGACGGAGGTGGTACAAAGTTGAGACACTTATTTTTGGACGGAGGGAGTACTAATTAGTAGAAACAGATTGATG
CATTGGGAGTTTAAAGGGCCCTTGCATCAACCTTATTGAACCGCAAAAACGTCTTATATTTAAGAACAGAGGTGGTAATA
AGTAGAAACAGATGGATGCATTGAGAATTTAGAGGGCCCTTGCATCAACCTTATTGAACTGCAAAA-CGTCTTATATTTA
GGAACAAAAGTAGTAGTAATTAGTAGAAACAGACTAGCAGTAGGACGGAAATGGCCAA-TTTCAAAGAACTTTGTAATGT
ACAGGAACTGCATACAAGCGGCCGGT
>chr2D_1
GAAGCATCAG-AAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTGCCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGCAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAATATCT-CTATCAATGTTTATATTCCAGAACTAGGTTCATGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACCCGTTGGTGATCCTCAAATTACTCATATTGTACTCCTT
TTCCCTTTATGAGTTTTCCATGATGGTTTCTCATATAAGGTTTTTAACAAGACAATATAAATACAAGTGCGGATATATGC
CATAATGGTTTCTCCTTATATTTTTCCCA-CTGGTTTTTAAAGGAGTTTTCGATGGCATATTATTATAAGGTTTATCCTC
AATTTTTCCCACAGGGTTTTTGGAGGAGTTTTCTGTTTGCAATATACATATGACGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGGAGGGATGCCTCCCAAGAGGTGTCTGTTGGGGAAGAGATGTCTCCCCAACAC
ACCCCTTCAGCATGTTTATAAGTGGGTCTCCCACATCACAATAGATCTAAGAGAATCA-TTTGTGTCTCTCGTTTGTCTC
TTTTACTTTGATACTACAATAG----------------------------------------------------------
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>chr2D_1
GAAGCATCACAAAATGTGGATGGCTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACCTGTATTACTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAATGTCTCTTATCAATGTTTATATTCCAGAACTAGGTCCGTGGAATTGGTATGGGATATTCTTG
AGGTTTGGAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACCCGTTGGTGATCCTCAAATCACCCATATTGTACTCTTT
TTCCCTTTATGATTTTTCCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGTGGACATATGC
CATATTGGTTTCTCCTTATATTTTT-TCA-CTGGGTTTTAAAGGAGTTTTCAATGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCACATGGTTTTTGGAGGAGTTTTCAGTTTGCAATATACATATGACGAATTGATCAAGGGGTAGTGTTCAGA
AATAAAAA-CATGTGATCAATTGTATTGGAGGGATGCCTCCCAGGAGGTGTCTGTTGGGGAAGAGATGTCTCCCCAGCAC
ACCCCTTCAGTATGTATATAAGTGGGTCTCCCACATTGCAATAGATCTAAGAGAATCATTTTTTGTCTCTCCTTTGT-TT
CTTTACTTTGATACTACAATAGTACTAA----------------------------------------------------
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>chr5D_1
GAAGCATCAGAAAATATGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAATATCTCT-ATCAATGTTTACAATCCAGAACTAGGTTCGCGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACCCGTTGGTGATCCTCATATCACTCATATTGTACTCTTT
TTCCCTTTATGAGTTTTCCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATACAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTATATTTTTTCCA-CTGGGTTTTAAAGGAGTTTTCGATGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCATAGGGTTTTATGAGGAGTTTTCAGTTTGCAATATACATATGACGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGGAGGGATGCCTTCCAGGAGGTGTCTGTTGGGGAAGAGGTGTCTCTCCAACAC
ACCCCTTCACCATGTATATAAGTGGGTCTCCCACATTGCAATGGAACTAG-AGGATCA-TTTGTGTCTCTCCTTTGCTTC
CTTTACTTT-----------------------------------------------------------------------
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>chr3A_1
GAAGCATCGGAAAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAATATCTCT-ATCAATGTTTACATTCTAGAACTAGGTTCGTGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACCCGTTGGTGATCCTCAAATCACTCATACTGTACTCTTT
TTCCCTTTATGAGTTCTCCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTAT-TTTTTCCCA-CTGGGTTTTAAAGGAGTTTTCGATGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCACAGGGTTTTTGGAGGAGTTTTCAGTTTGCAATATACATATGACGAATTGATCAAGGGGGGGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGGAGGGATGCCTCCCAGGAGGTGTCTGTTGGGGAAGAGGTGTCTCCCCAACAC
ACCCCTTCACCATGTATATAAGTGGGTCTCCCACATTGCAATGGAACTAG-TGGATCA-TTTGGACTCTTCATGTGTCTC
TTTTACTTTCACTCTATAACA-----------------------------------------------------------
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>chr3A_1
GAAGCATCAGAAAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATCATCATTATCTACCAA
GATACTGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTAATATTCACAATATCTCT-ATCAATGTTTACATTCGAGAGCTAGGTTCGTGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAAGGGGAGTAAAATCCCAAGTTATAACCCGTTAGTGATTCTCAAATCACTCATATTGTACTCTTT
TTCCCTTTATGAGTTTTCCATAATGGTTTCTCATATAAGGTTTTGAACGAGACAATATAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTATATTTTTCTCA-CTGGGTTTTAAAGGAGTTTTCGGTGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCACATGGTTTTTGGAGGAGTTTTCAGTTTGCAATATACATATGATGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGGAGGGATGTCTCCCAGAAGGTGTCTGTTGGGGAAGAGGTGTCTCCCCAACAC
ACCCCTTCACCATGTATATAAATGGGTCTCCCACATTGCAATAAAATGAG-TGGATCA-TTTGTGTCTCTCCTTTGTCTT
CTTTACTTTGATACTACAACA-----------------------------------------------------------
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>chr1A_1
GAAGCATCAGAAAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAGTATCTCT-ATCAATGTTTACATTCCAGAACTAGGTTCGTGGAATTGGTATGAGATATTCTTG
AGGTTTACAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACCCGTTCGTGATCCTCGAATCACTCATATTGTACTCTTT
TTCCCTTTATGAGTTTTTCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGCAGATATATGC
CATATTGGTTTCTCCTTATATTTTTCCCA-TTGGGTTTTAAAGGAGTTTTCGATGGCATATTATTATAAGGTTTCTCCTC
AATTTTTCCCATAGGGTTTTTGGAGAAGTTTTCAGTTTGCAATATACATATGACGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGG-GGGATGCCTCCCAGGAGGTGTCTGTTGGGGAAGAGGTGTTTCCCCAACAC
ACCCCTTCACCATGTATATAAGTGGGTCTCCCACATTGCAATGGAACTAA-TGGACCA-TTTGGACTCTTCATGTGTCCC
TTTTAATTTCACTCTATAACA-----------------------------------------------------------
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>chr1A_1
GAAGCATCAGAAAATATGGATGACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTTCTTATGGGTTATATTTATCCTTGCGAATTACAGAAATGTAAGAGGATAATATGCAAATAGA
TTATTGTGATATTCACAATATCTCT-ATCAATGTTTACAATCTAGAACTAGGTTCGTGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAAGGGGAGTAAAATCCCAAGTTATAACCCGTTGGTGATCCTCAAATCACTCATATTGTACTCTTT
TG-CCTTTATGAGTTTTCCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTATATTTTTCCCA-CTGGGTTTTAAAGGAGTTTTCGATGGTATATTATTATAAGGTTTCTCCTC
AATTTTTCCCACGTGGTTTTTGGAGGAGTTTTTAGTTTGCAATATACATATGACGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTAATCAATTGTATGGGAGGGATACCTCCCAGGAGGTGTCTGTTGGGGAAGAGGTGTCTCTCCAACAC
ACCCCTTCACCATGTATATAAGTGGGTCTCCCACATTGCAATGGAACTAAGAGAATCA-GTTGTGTCTCTCCTTTGTCTT
CTTTACTTTGATACTACAA-------------------------------------------------------------
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>chrUn_1
GAAGCATAAGAAAATGTGGATGACTTCATAGAATGATTGGCCACATGTGAA-TCCTGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAATAGGATAATATGCAAACAGA
TTATTGTGATATTCACAATATCTCT-ATCAATGTTTACATTCCAGAACTAGGTTCGTGGAATTGGTATGAGATATTCTTG
AGGTTTGCAAAGTTCAGGGGGAATAAAATCCCAAGTTATAACCCGTTGGTGATCCTCAAATCACTCATATTGTACTCTTT
TTCCCTTTATGAGTTTTCCATGATGGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTATATTTTTTCCA-CTGGGTTTTAAAGGAGTTTTTGATGGCATATTATTATAAGGTTTCTCCTC
AATTTTCCCCACGGGGTTTTTGGAGTAGTTTTCAGTTTGCAATATACATATAACAAATTGATCAAGGGGGAGTGTTGAGA
AATAGAAA-TATGTGATCAATTGTATGGGAGGGATGCCTCCCAGAAGATGTCTGTTGGGGAAGAGGTGTCTCCCCAACAC
ACCCCTTCACCATGTATATAAGTGGGTTTCCCACATTGCAATGGAACTAG-TGGATCA-TTTGGACTCTTCATTTGT-TC
CTTTACTTTCACTCTACAACA-----------------------------------------------------------
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>chr7A_1
GAAGCATCAAAAAATGTGGATAACTTCATAGAATGATTGGCCACATGTGAAATCATGTGGAGATTATCATTATCTACCAA
GATAATGTCACTTGTATTGCTTATGGGTTATATTTATCCTTGTGAATTACAGAAATGTAAGAGGATAATATGCAAACAGA
TTATTGTGATATTCACAGTATCTCT-ATCAATATTTACATTCCAGAACTAGGTTCGTGGAATTGATATGAGATATTCTTG
AGGTTTGCAAAGTTCAGGGGGAGTAAAATCCCAAGTTATAACTCGTTCGTGATCCTCGAATCACTCATATTGTACTCTTT
TTCCCTTTATGAGTTTTTCATGATAGTTTCTCATATAAGGTTTTTAACGAGACAATATAAATACAAGTGCGGATATATGC
CATATTGGTTTCTCCTTATATTTT-CCCA-CTGGGTTTTAAAGGAGTTTTCGATGGCATATTATTATAAGGTCTCTCCTC
AATTTTTCCCACATGATTTTTGGAGGAGTTTTCAGTTTGCAATATACATATGACGAATTGATCAAGGGGGAGTGTTGAGA
AATAAAAA-CATGTGATCAATTGTATGGGAGGGATGCCTCCCAGGAGGTGTCTGTTGGAGAAGAGGTGTCTCCCCAACAC
ACCCCTTCTCCATGTATATAAGTGGGTCTCCCACATTGCAATGGAACTAG-TGGATCA-TTTGGACTCTTCATGTGTCTC
TTTTACTTTCACTCTACAACAG----------------------------------------------------------
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>chr4A_799
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----TTGAATGCAAATCCCCTTTGCGTTCGGTTGTTTACTGTTGCGTCCACGACGATAGGCAGGCTTCCCCTCGTGGCGG
CGGCGCAGAAGCCGTGCGTCTGTTTGGTGCGGCCGTGAGAGAAGGGACGGAATCCGCCGCCGTCCGGTCCGTAATCCGTG
GCGATAAAACCCAATCCCCCGCTGCCCCGGTATCAATCGCGGCAGCATGGAGTCGGGAGCCAGATCAGAAGTAAGGCCAG
ACGAGGAAGGGCCGGCCCCGGCGGGAAGCAGCAGCGGCGGCAGCAAAGTGTACCACGAGAGGCAAAGGATGCAGTTCTGC
CTCCTCCACGCCCTCAACAACCTTATGCAGGTGACCCTTCTCCTCTCCTCTCTTGCTTAGTTGCGCTACTGTGTTCTTGT
CTTGGTTCTCGAGTAGCTGCACTTGAGAACTTTGCGTAATCCTAAGTTTAGTAATTGAGTCCAATCAATTAGATTCTATC
TCTCGTGCTTTCTTGTTCGCCTGATTATTCCCATCAAAGGACATCGGCAGTCAGTCAGCACCCGCATCTGCGAACTAAGT
AGTCAAATTACTCGGCATGAAACTACAGATTGTTGTAGTGGCGGAGCGTTGTGCCCTTGGTGGGCATTTTTTTTTACTGT
GTGATTGTTTCCAACTTGTCACAACTTAGGCTGTGGTGAAATATCAGGGCATATTGAG-AGTATGTACAGATCTTCCTTC
TCGGT----AGAAAGAGACAGCAATTGAGGTCACTGTATCGACTATTGGCCCATTGAGTGGGCACTGTTCGTCATTAGTT
ATGTC-GACAAGTTTATGGGTGGGTGTGGTTCACCCGTTTTGCAGCCCTCTGTCCACCGAATACAATGAAGGCTTTGCCA
GTTGTGCGCGTGAATCATGAATTGGTAGCTGATAGGGATAGAAACAAATCTTTTGGTCTTTGTCAAGTTTCATAATGACG
TTTCAAATTGACGTTGACATGAATTTGGGGAACCAGGCAGTGCACGCTTGCAGCCGTGTGAGTGCAAGAGGCCAAGATCG
CACGC-------------TTAAGCTGCTATCTGATTGGCTTTCATTTCTTATCATCTA----------------------
----------------------------------------------------------------ATCAGTAGG-AAAAAA
TATCACAATAATTTAATCCTCGGAGAGGTAACTGGTTGGCACTTTCACTCATCAACATATATACAGGTGGCATGATCTTA
CCATGCACTTCATAGTCGGTCTCTTTGCTCTGACGCCACCTCATTTAATCCGGGCTTACCATGATTATGTTTTGTGTGGT
TCAGGAAAAAGAATCGTTCACCCGAGCTGAGCTGGATGGGATTGCTGAAAATCTTGTTCTTACTGATCCAAACAAGGAGA
AATGGACTCCTCTATCGCTGATTTGGAAGCCCCACCACAATGCATTAACAGGGAACTATGATGTAAATGTTCTTATCGCG
GCAGTAGAATCTAGAAAGAAGAAGGTAGTTTGGCATGATCATCGGAAGGGAGCATCTTCGATTGATCTGGATGCCGAAGC
GCTGGTAGGTCTGATGATCAATGTACCCGTGAGGAGGTTGAGGGGTCTGTGGACCGGGAGGCATTGGGTGGCAATTCGAA
GCATTGATGGCATCTGGTTTAATTTGGACAGCGATCTTCCGTCGGCCAAGCAGTTTCAGTGCAAAGAAAAACTAATTGCG
TTCCTGGACAGCGTTCTCAGTCAAGGCGGAGAACTGATGATCGTGCTCCAAGACGAATGATTGCACTGCTTAAGATCTCA
A-AGGCTACAACAATTGGCTTCTCCTCTGTGATTTATCCGTTGCCCATATTTCCGAATTGGCAATGAGATCACCTGCGTC
TGCAATAGCAGCTTCTCTGAAACTCTCTGATCTTTGTGAGAATCATGGTGTGCCTGTAGGAGTTC--------GGATACA
TGGAATGATAGAAGTTTTCAGTTTTCTGAGA-------------------------------------------------
-----------TTGTGTATGCAGAGCTTAGGAAAGGAGAATCTGTTGCGGCAGTGTATATGCCTTTTTTTTGT------A
ACTGAAGTGTATATGCTCTGTGGAAAACTATTTTGTGAGCATTGCTTTGACGTGTACATTACATCTTGAACCATTTGGTG
TGAGTTTTTTTTTTAGTTTCTTGTGTGTTTCTCCTGTTGGTCGTGTACTGTTAAAATGATCGACAGTGGTAGAGCTGCTG
TTTAAGCCTATTAGCACCTCTTCTAGTTGGAACTGGGAAGCAAGGCCGGTAGTTTTGAAATCTATAACTTGA--AATCGA
ATGGGTTAATGCATTGGGAGTTTAGAGGGCCCTTGCAACAACCTTGTTGAACTGCAAAAGCGTCTTATATTTAAGAACAG
AG------------------------------------------------------------------------------
-----------------------------------------------------GTACTAATTAGTAGAAACAGATTGATG
CATTGGGAGTTTAGAGGGCCCTTGCATCAACCTTATTGAACTGCAAAAACGTCTTATATTTAAGAACAGAGGTACTAATA
AGTAGAAACAGATTGATGCATTGGGAGTTTAGAGGGCCCTTGCATCAACCTTATTGAACTGCAAAAACGTCTTAAATTTA
GAAACAGAGGTAG---TAATTAGTAGAAACAGACTAGCAGTAGGACTGAAATGGCCAAATTTCAAAGAACTTTGTAATGT
ACAGGAACTGCATACAAGCGGCCGGT
>chr4B_813
CCTTTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------TGTTCGGTTGTTTATTGTTGCGTCCACGACGAAAGGCAGGCATCAG-TCGTGGCGG
CGGCGCAGAAGCCGTGCGTCTGTTTGGTGCGGCCGTGAGATAAGGGAAGGAATCCGCCGCCATCCGG-------------
----------CCAATCCCCCGCTGCCCCGGTATCAATCGCGGCAGCATGGAGTCGGGAGCCAGATCGGAAGCAAAGCCAG
ACGAGGAAGGGCCGGCCCCGGCGGGAAGCAGCAGCGGCAGCA---AGGTGTACCACGAGAGGCAAAGGATGCAGTTCTGC
CTCCTCCACGCCCTCAACAACCTTATGCAGGTGACCCTTCTCCTCTC-----TTGCTTAGTCGCGCTACTATGTTCTTGT
CATGGTTCTCG--TAGCTGCACTT-AGAACTTTGTGTAATCCTAAGTTTAGTAATTGAGTCCAACAAATTAGATTCTATC
TCTCGTGCTTTCTTGTTAGCCTGATTGTTCCCATCAAAGGACATCGGCAGTCAGTCAGCACCCACATCTGCGAACTAAGT
ACTGAAATTACTCGGCGTGAAGCTACAGATTGTTGTAGTCGCGGAGCGTTGTGCCCTGGGTGGGCATGTTTTT----TGT
GTGATTGTTTCCAACTTGTCACAACTTACGCAGTGGTGAAAGATCAGGGCATATATTGAAGTATGTAAAGATGTTCCTTC
TCGGTCCGTAGAAATAGACAGCAATTGAGGTCCCTCTGTCAACTGTTGGTCCATTCAGTGGGCACTGTTCGTCATTAGTT
TTGTC-GATACGTTTATGGGTGGGTGTGGTTCACCCGTTTTGCAGCCCCCTGTCCACCGAATACAATGAAGGCTTTGCCA
GTTGTGCGCGTGAATCATGAATTGGTAGCTGATAGGGATAAAAACAAATATTTTGGTCTTTGTCAAGTTTCACAATGACG
TTTCAAATTGACGTTGACATGAATTTGGGAAAGCAAGCTGTGCACGCTTGCGGCCATGTGAGTGCAAGAGGCCAAGATCA
CACGGCAATAACAAGCATTTATGCTGCTGCCTGATTGGCTTTCATTTCTTATCATCTACTCCCTCCGTCCCATAATGTAG
GACGTTTTTTGACACTAGTGTAGTGTCAAAAAACGTCTTACATTACGGGACGGAGGGAGTAATAATCAGTATGAAAAAAA
TATTACAATAACTTAATCCTCGGAGAGGTAACTGATTGGCACTTTCACTCATCAACATATATACAGGTAGCATGATCTTA
TCATGCACTGCATAGTCGGTCTCTTCGCTCTGACGCCACCTTATTTAATCTGGGCTTACCATGATTGTGTTGTGTGTGGT
TCAGGAAAAAGAATCGTTCACCCGAGCTGAGCTGGATGGGATTGCTGAAAACCTTGTTCTTACTGATCCAAACAAGGAGA
GATGGACTCCTCTATCGTTGATTTGGAAGCCCCACCACAATGCATTAACAGGGAACTATGATGTAAATGTTCTTATCGCG
GCGGTAGAATCTAGAAAGAAGAAGGTAGTTTGGCATGATCATCGGAAGGGGGCATCTTCGATAGATCTGGATGCGGAAGC
GCTGGTAGGGCTGATGATCAATGTACCCGTCAGGAGGTTAAGGGGTCTGTGGACCGGCAGGCATTGGGTAGCAATTCGAA
GCATTGATGGCATCTGGTTTAATTTGGACAGCGATCTTCCGTCGGCCAAGCAGTTTCAGTGCAAAGAAAAACTAATTGCA
TTCCTGGACAGCGTTCTCAGTCAAGGCGGAGAACTGATGATCGTGCTCCAAGACGAATGATTGCACTGCTTCAGATCGG-
---GGCTACAGCTAATGGCTTCTCCTCCATGATTTACCCGTTGCCCATATTTCTGAATTGGCAATGAGACCGCTTGCGTC
TGCAATAGTAACTTCTCTGAAACTTTCAG-TCTTTGTGAGAATCATGACAGTCATTGGCCTTTGTATTTAACTGATTTTG
TGTATGTCAAATGCCAACAAGTTGTCGACAGAGGCATATCACATGCTGCTGAGGAACTGTCTTATTTTTTTAAGCCTGAG
GGAACTGTCAGTTGTGTATGCAGAGCTTTGGAAAGGAGAATCTGCTCCGGCAGTGTATGTGCCCTGTTTTTTTCTGGGAA
ACTGAAGTGTATATGCCCTGTGGAAA-CTATTTTGTGAGCATCGCTTTGACGTGTACATTACATCTTAAAACATTTGGTG
TGAGTTTTA--TATTTCCT----TGTGTGTTTCTTGTTGGCCAAGTACTGTTAAAATTATCGACAGCGGTAGCGCTGCTG
TTTAAGCCTATCAGCTTATCTTCTGTTTAGTACCTGGAAGAAAGGCCAGTGGTTTCGAAATCTTTAACTTGAAGAATCGA
ATGGGTTAATGCATTGGAAGATTAGAGAAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCTTGCGTCAACCTTATTACTCCCTCCGTTCGGAATTACTTGTCTCGGAA-----------
-----------ATGGATGTATCTAGAATACAAGTAATTCCGAATCGGAGGGAGTACA-----------------------
----------------TAATTAGTAGAAACAGACTAGCAGTACGACAGAAATGGCC-AATTTCAAAGAACTTTGTAATGT
ACGGGAACTGCATACAAGCGGCCGGT
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
------------------S--------S----------------------------------------------------
---S--------------------S-------------------------------------------------------
----------------------------SS--------------------S-----------------------------
------------------------------------------------------------------S-------------
--------S------------------S-----------------------------S-S-------------S------
---------S--------------S---------S---------------------S-----------------------
----------------------SSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-------------S-------------S------------------------------------------------
-------------------------------------S-----------------S------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------SS-----S----S-----------------------------------------------------------
--------------------------------------------------------------------------------
-----S-------S---S----------------S----S-S------------S-------S-----------S-----
-S---------------S-------------------------------------S------------------------
---------------S----------------------------------------------------------------
-----S--------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------------S----S---------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------S----------------------------------
-----------------------S--------------------------------------------------------
-----------------------------S--S--S-------------------------------------------S
-S------S-----------------------------S---------------------S-------------------
------------------------------------------------------------------SS--SS-----S--
---S---------------SS-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------S------------------------------------------
---------------------------------S----------------S----------------------------S
---------------S-------------------------------------------------------S--------
-------------------------------S-----S-------S-------------S--------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
-------------S-----------------------------------------------------------SS-----
--------------------------------------------------------------------------S-----
-S----S-S----SSS------------------------------S---------------------------------
--------------------------
>forward_761
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------GCTATAACAAGGCAGTGGCG---------------------------------------
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--------------------------
>reverse_2096
--------------------------------------------------------------------------------
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---------------GCGGTTTCTTTGCTCTGACG---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>forward_1186
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------CCTCTCTTGCTTAGTCGCGG--------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2504
--------------------------------------------------------------------------------
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-----------------------CTGGACAGCGATCTTCCGTC-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------AGT
AGTCAGATTACTCCGCGC--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_3366
--------------------------------------------------------------------------------
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-----TGGACGGAGGTGGTACAAAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
