>input_sequence_49885
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------------------------------ATGGACGAACGGATCCTAGAAGCAGCCACCGATGGTGATTCCTCATCAAT
TAAAGAGTGGGCCAAGGAGAATCCAGGCATTCTGCTTGGAACAAGCCCACAAGGGAACAACTGCCTCCACATCTCCACCA
TCCATGGGCACAAAAAATTCTGCATGGATGTGCTGGAACTAGAGCCGTCTCTCCTTTCAGATGTCAACTGCGAGCACGAG
ACGCCGCTTATCATCGCTGTAACACTTGGCCATGCATCTTTGGTTTCATATTTACTCGAGTGCTGCCGCAAAGAAGAAGA
ATTGAGGCGGACAATCTTGCAACAAGACAGGTATGGATTCAACGCACTTCACCATGCCATTCGCAACGGCTACCAGAAGC
TCGCGCTGGAGTTGATAAAAGCAGAGCCCGCCCTGTCTAAAGCCGTGACCAGGTACAATGAGTCGCCCATGTTCATGGCC
GTGATGAGGAATTTTGCAGATGTTTCCGAAAAGCTATTAGCCATTGTTGATTCTTCCCATGTGGGAAAGTATGGCCGCCA
TGCTCTTCATGCTGCAGCTAGAAATGGAAATGAAGGTGAGACCTGTGGATTACAAGTTAAATATAGAATTATATATGTAT
GTGCAGCAAACTAGCTCTAGGATTTACAACTTGGAATTATCCAGAGCTAGTGTAGTTCATGTGTTTTAGTATTGTGTTAT
ATATTATCACTACTAAACTAAACAGTCGAATAATCGATTTTTCTACGTCATTTTTTGTACCAAAGACTTGTCCTAGCATC
ATCGCTGTGCTCTTAACCCATCGTTCATGCATGTCTTGACTTGCTTTCAGATATTGCGGACGAAATTTTGGAGAAACGTT
CTCACCTGGCCAGAGAAGCTGACTCGGATGGGATTACTCCAATACGAATGGCTGTATCTCATGACAAGTCTGACGTGCTG
ATCACATTGCTGCAACATGATTCTTCTTTAGCATATGAAACCGACAAGACTGGTTATCCTCTCCTCTGTTCGGCCGCTAC
TCGGGGTCAAGTTAATGTTGCTCGAGTGCTTCTTCTCTATTGCCCGGATGCTTTTTATTGCCCGGTACTCAGAGATGGTA
CGGCAATTGGAAAAAGTTTGACATGCCTTCACATAGCTGTACAGAACGGTCATCTAGAGTTCGTCGAATTTATCTTGAGG
AGGCCGCAACTTCGGAAACTCATTAACATGCAAGACATGGATGGAAAAAATGCTCTGCATTACGCAATCCAGCAGTGTGA
TCCTAAACTTGTTGCTGCATTACTGGCTCATGACGATATAATAGACACTACAATTCTCGACAACCATGGTAACTCAGCGG
CTTCGCAATTATCGAGCATTACTGATGAAGACAAGCCTTTAGACTGGGTACATA------TATGCTATAAACATATTGAA
TCATATAATAT---TATTATTGTAGACCTTATTAATTTTTTGTGTTCCTTGTTTTTAA----------------------
---------------TTGAATCCATGCAGAAGGAAGTGCACGTGCTTATGTGA---------------------------
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>chr3B_1_TraesCS3B01G504500
GTTGATCCTTGTATTGTGTTGTAACTTTGTACTTAATCTTCTTTTTTGTTCTTCTTGTTGCTCGTATGGTTCTTCGGCCC
GGTTTCCCTCATAAACAGAATCAATTTGTTTAGGTTTTCGATCCGGATTCCCTTATAAACTAGATCACTCTCTTAGTGTA
TGGCCAACTTTGAGTAATATACTCATGTGGGGGAACTCCCTCACCCATCACCCCGTGATTCCTCACAAAAATCATTAATG
CAAGCGGCCTTGATCTTCACAAGGAGCTCTTTAGCAAGGCCACTACATAGGAGTAGGTACTAAAGTTGACAGTGCAACTT
CCAATTTAACTTAGGCAGGAAGGCAGGCATGCATCTTGTGTGCTAGATAATCAATCTTAAAGGCTAGCTCCATCACATGC
CTAATCCTAAAAGGGTATGGGTGATAGTATTATCTAATTAATGGTAAGTAATCAGATTACTACTACTTTATAAAGGTTCC
CCGTTCCGAGG------------------------------ACTTTATCAAAGGTACCAAATATCACACACATGGCTAAT
GAATAATCAAATTGAGCGAGTGAGTTGGTGTCTTTTACCTCCAGCGTCCATAAAAGTTGGTGCCATCCGATCCAGTGGAG
CACAAGTGAGCTCCGCTCTTCGTTGTGTGACTG--CGTACTTGATCTCTGCTACTGTGTGAGGTACGTACGAGTAGGAAC
TATTTCACCTAGATTATGGCCATGTTT------------------------------TGAGTTTGATCTATCAGGATTCT
TCTATTGTGCCTAATAACATTGCAATGCATGTGGTGGTCTGTCTAGTCTAGTTTAGATTCTGTTTGGTTCGAAGATCACA
TCAGCCTTGATTGTATGTTGCTTACGATTGCCATTATTTCTTTCACAAAATAAATAAATAGTGAAAGAACATCAAAATCA
AGCATGCAAGTATCACCTTTCTTTCATCTTGGCTGCAGTAAACGCAAC--------AGATAGATGGCAAACAATACAACG
ACAACTGATGTATCAGGAGGACAGTCACGGATGGACGAACGGATCCTAGAAGCAGCCACCGATGGTGATTCCTCATCAAT
TAAAGAGTGGGCCAAGGAGAATCCAGGCATTCTGCTTGGAACAAGCCCACAAGGGAACAACTGCCTCCACATCTCCACCA
TCCATGGGCACAAAAAATTCTGCATGGATGTGCTGGAACTAGAGCCGTCTCTCCTTTCAGATGTCAACTGCGAGCACGAG
ACGCCGCTTATCATCGCTGTAACACTTGGCCATGCATCTTTGGTTTCATATTTACTCGAGTGCTGCCGCAAAGAAGAAGA
ATTGAGGCGGACAATCTTGCAACAAGACAGGTATGGATTCAACGCACTTCACCATGCCATTCGCAACGGCTACCAGAAGC
TCGCGCTGGAGTTGATAAAAGCAGAGCCCGCCCTGTCTAAAGCCGTGACCAGGTACAATGAGTCGCCCATGTTCATGGCC
GTGATGAGGAATTTTGCAGATGTTTCCGAAAAGCTATTAGCCATTGTTGATTCTTCCCATGTGGGAAAGTATGGCCGCCA
TGCTCTTCATGCTGCAGCTAGAAATGGAAATGAAGGTGAGACCTGTGGATTACAAGTTAAATATAGAATTATATATGTAT
GTGCAGCAAACTAGCTCTAGGATTTACAACTTGGAATTATCCAGAGCTAGTGTAGTTCATGTGTTTTAGTATTGTGTTAT
ATATTATCACTACTAAACTAAACAGTCGAATAATCGATTTTTCTACGTCATTTTTTGTACCAAAGACTTGTCCTAGCATC
ATCGCTGTGCTCTTAACCCATCGTTCATGCATGTCTTGACTTGCTTTCAGATATTGCGGACGAAATTTTGGAGAAACGTT
CTCACCTGGCCAGAGAAGCTGACTCGGATGGGATTACTCCAATACGAATGGCTGTATCTCATGACAAGTCTGACGTGCTG
ATCACATTGCTGCAACATGATTCTTCTTTAGCATATGAAACCGACAAGACTGGTTATCCTCTCCTCTGTTCGGCCGCTAC
TCGGGGTCAAGTTAATGTTGCTCGAGTGCTTCTTCTCTATTGCCCGGATGCTTTTTATTGCCCGGTACTCAGAGATGGTA
CGGCAATTGGAAAAAGTTTGACATGCCTTCACATAGCTGTACAGAACGGTCATCTAGAGTTCGTCGAATTTATCTTGAGG
AGGCCGCAACTTCGGAAACTCATTAACATGCAAGACATGGATGGAAAAAATGCTCTGCATTACGCAATCCAGCAGTGTGA
TCCTAAACTTGTTGCTGCATTACTGGCTCATGACGATATAATAGACACTACAATTCTCGACAACCATGGTAACTCAGCGG
CTTCGCAATTATCGAGCATTACTGATGAAGACAAGCCTTTAGACTGGGTACATA------TATGCTATAAACATATTGAA
TCATATAATAT---TATTATTGTAGACCTTATTAATTTTTTGTGTTCCTTGTTTTTAA----------------------
---------------TTGAATCCATGCAGAAGGAAGTGCACGTGCTTATGTGAGGAGCTGATCCCAATGATGATGACATC
TCATTGTATAATCTAAGCAAGGTAGCCAAGCAACGGGAAACTATTGAATCAAGGAAGGAGAGGC----------------
--------AATCTCAAACTCAAAAATACACAAACAACACGTCATTTGTGGCAATCCTACTTGCGACAATAACCTTCACCG
CTGCTTTCACTCTACCTGGAGGATATAGCAGTGATGCTGGAAGTGCGGGACTTCCCATCATGTCTAAAGAGATTGCATTT
CAAGCATTCTTGGTCTCTGACACCTTAGCAATGTGCTCTTCATTTGTTGCGGCCTTCATATGCCTCATGGGAAGGTGGGA
GGATGCTAACATCACAAATTATTATATCTCCGTTACTAAGAAGCTTACTTGGTTTGCATACATGGCAACAATTACAGCTT
TTGCGACTGGTTTGTACACAGTGCTGTCCGCACGTGTCCACTGGTTGGCCATTGGGATTTGCTCTGTGGTAGGTTTAGTG
CCCTTTCTTACTATGTTCATAGCGAAATGGCCTATCTTGAAGCTCAAGTTTCGCCAAACTTGTCGTGGCTTGAGGCTCAA
ATTTCGGCAACGCCAAACTGGCAAATCCAAATCCAATGACACGGTCTGAGCCGGACAGTTTGTTTTATGGTTATTCTTTC
TAGTAATAATTTACAATTTATCTGTAATGAACATTGTTTGGATACATTATTGCAATATTACTTGTTAATTCATTGGGGGA
AAACATTGTACAGTTCATTCTTGCATTCCGTTCGATGTTCATTAATTTGAAAGACAGCTCTAATGGTGATTAGTATTTGA
AAGACGAGAATGGACGTAGCTACAATAAACATTTCTATGATAAAATCGATACGGTTTAACATAGCTACAGCCTACAAGTT
GGATGTTGATACAGTTGATCTATTTTGAAACACCAGGACAACACATAATCCTCAAG--ATACAACAGGCTAGGTAAACAA
GAAAAAACATGATAGGTCTTACAATCACACAAAAAAAAA
>chr3D_1
GTTGATCCTTGCATTGTGTTGTAACTTTGTACTTAATCTTCTTTTTTGTTCTTCTTGTCGCTTGTATGGTTCTTCAGCCT
GGTTTCCCTCATAAACGGGATCAATTTGTTTAGGTTTTTGATTCAGCTTCCCTTATAAACTGGATCATTCTCTTAGTGCA
TGGCCAACTTTGAGTAGTATACTCATGTGGGGCAACTCCCTCCCATATCACCCTGTGATTCCTCACAAAGATCATCGATG
CAAGCGTCTTTGATATTCGCAAGGAGCTCTTTAGCAAGGCCACTACATAGGAGTAGGTACTAAAGTTGACAGTGCAACTT
CCAATTTAACTTGGGCAGGAAGGTAGGCATGCATCTTGTGTGCTAGATAATTAATCTTAAAGGCTAGCTCCATCACATGC
TTAATCCTAAAAGGGTATGGATGATAATATTATCTAATTAATGGTAAGTAATCAGATTACTGTTACTTTATAAAGGTTCT
CCGTTTCAAGGACTTTATCAAAGGTTCCCTAAATAAAAGGAACTTTATCAAAGGTAACATATATCACACACATGGCTAAT
GGATAATCAAATTGAGCGAGTGAGTTGGTGCCTTTTAACTCCAGCGTCCATAAAAGTTGGTGCCATCCGATCCAGTGGAG
CACTAGTGAGCTGCGCTCTTCGTAGTGTGACACTACGCACTTGATCTCTGCTACTGTGTGAGGTACGTACAAGTGCGAAC
TATTTCACCTAGATTATGCCCATGTTTTGCTACCATTAACTCGTTTTGCTACCATTGTGAGTTTGATCTATCAGGATTCT
TCTCTTGTGCCTAATAATGTTGCAATGCGTGTGGTGGTCGGTCTAGTCTAGTTTAGATCTTGTTTGGTTCGAAGATCACA
TCAGCCTTGATTGTATCTTGCTTACGATTGCCATTATTTCTTTCACAAAATAAATAAATAGTGAAAGAACATCAAAATCA
AACATGCAAGTATCACCTTTCTTTCATCTTGGCTGCAGTAAACGCAAC--------AGATAGATGGCAAACAACACACAA
ACAACTGATGTATCAGGAGGACGGTCACGGATGGACCAACGGATCCTAGAAGCAGCCACCTGTGGTGATTCCTCGTCAAT
GAAAGAGTTGGCCAAGAAGAATCCAAGCATTCTGCTTGGAACAAGCCCACAAGGGAATAACTGCCTCCACATCTCCACCA
TCCATGGGCACAAAAAGTTCTGCATGGATGTGCTGGAACTAGAGCGGTCTCTCCTTCCAGATGTCAACTGCGAGCAAGAG
ACGCCGCTTGTCATCGCTGTTACACTTGGCCATGCCCCTTTGGCTTCAGATTTACTCAAGTGCTGCTGCAAAGAAGAAGA
ATTGAGGCGGATAATCTTGCAACAGGACAGGTATGGATTCAACGCACTCCACCATGCCATTCGCAACGGCCACCAGAAAC
TCGCGCTGGAGTTGATAGAAGCAGAGCCAGCCCTGTCGAAAGCCGTGACCAAGTACAATGAGTCGCCCATGTTCATGGCC
GTGATGAGGAATTTTACAGATGTTTCCGAGAAGCTATTGGCCATTGCTGATTCTTCTCATGTGGGAAAGTATGGCCGCCA
TGCTCTTCATGCTGCAGCTAGAAATGGAAATCAATGTGAGACCTGTGGATTACAAGTTAAATATAGAATTGTATATGTAT
GTGCAGCAAACTAGCTCTAGAATTTACAACTTGGAATTATCCAGAGCTAGTGTAGTTCATGTGTTTTAATATTGTGTTAT
ATATCATCACTACTAAACTAAACAGTCTAATAATCGATTTTGCTACGTCATTTTTCGTACCAAAGACTTGTCCTATCATC
ATCACTGTGCTCTTAACCCATCGTGCATGCATGTCTTGACTTGTTTTCAGATATTGCGGGCGAAATTATGGACAAACGTC
CTCTCCTGGCCAGAGAAGCTGACTCGGATGGGATTACTCCAATAAGAATGGCTATAACTTACGACAAGTCTGACGTGCTG
TGCATATTGCTGGAATATGATTATTCTTTAGCATATGAAACCGACAAGAATGGTTATCCTCTCCTCTGTTCAGCCGCTAC
TCGGGGTCAAGTTAATGTTGCTCAAGTGCTTCTTCTCTATTGCCAAGATGCTTTTTATTGCCAGGTACTCAGAGATGGTA
CGGCAATTGAAAAAAGTTTGACATGCCTTCACATAGCTGTACAGAACGGTCATCTAGAGTTCGTCGAATTTATCTTGAAG
AGGCCACAACTTCGGAAACTCATTAACATGCAAGACATGGATGGAAAAACTGCTCTACATTACGCAATCCAGCAGTGTGA
TCCTAAACTTGTTGCTGCATTACTGGCTTACGACGATATAATAGACACAACAATTCTCGACAACCATGGTAATTCAGCGG
CTTCGCAATTATCGAGCATCACTGATGATGACAAGCCTTTAGACTGGGTACGTA------TATGCTATAAACATATTGAA
CCATATAATATTAGTATTATTGTAGACCTTATTAATTTTGTCTTTTCCTTGTTTTTAA----------------------
---------------TTGAATCCATGCAGAAGGAAGTGCAGCTGCTTATGCAAAAAGCTGATCCCAACGATGATGACATC
TCATTGTATAATCTAAGCAAGGGAGCCAAGCAACGGGAAACTATTGAATCAAGGAAGGAGAGGC----------------
--------AGTCACTAACTCAAAAATACACAAGCAACACATCACTCGTGGCAATTCTACTTGCGACAATAACCTTCACTG
CTGCTTTCACTCCACCTGGAGGATATAGCACTGATGCTGGAAGCGCAGGACTTCCCATCATGTCTAAACAGATTGCATTC
CAAGCATTCTTGGTCTCTGACACCTTAGCAATGTGCTCTTCATTTGTTGTGGCCTTCATATGCCTGATGGGAAGGTGGGA
GGATGATAAGTTCACAACTTATTATATCTCAGTGACTAAGAAGCTTACTTGGTTTGCATACATGGCAACCATTACAGCTT
TTGCGACTGGTTTGTACACAGTGCTGGCCACGCGTACCCACTGGTTGGCCATTGGGATTTGCTCTGTGGTAGGTTTAGTG
CCCTTTCTTACTATGTTCATAGCGAAATGGCCTATCTTGAAGCTCAAGTTTCGCCAAACTTGTCGTGGCTTGAGGCTCAA
ATTTCGGCAACGCCAAACTGGCAAATCCAAATCCAATGACATGGTCTGAGCCGGACAGTTTGTTTTATGGTTATTCTTTC
TGGTAATAATTTACAATGTATCTGTAATGAACATTGTTTGGCTACTCTATTGCAATGTTACTTGTTAATTCATTGGGGAA
AAACATTGTACAGTTCATTCTTCCATTCCGTTGGATGTTC----ATTTGAAAGACACCTCTAATGGTGATTAGCATTTGA
AAGGCGAGAATGGACGTAGCTACAACAAACATTTCTATGATAAACTCAATACGGTTTAACATAGCTACAGCCTACAAGTT
GGATGTTGATACAGTTGATCTATTTTGAAACACCAGGACAACACATAATCCTGAAGATATACAACAGGCTAGGTAAACAA
GAAAAAACATGATAGGTCTTACAATCACAAAAAAAAA--
>chr3D_916
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-----------------TTTCTTTCTTCTTTTCTGCAGTAAACCTAGCTCAAGCAGAGATAGATGGCTGCCAATACACCC
ACAACTGATGGAACTGGAGGACAGTCAGCGATGGACGAACGGATCCTGAAAGCAGCCACCTCTGGTATTTTCTGGGACAT
TGAGGTGTTGGCTACAAAGAGTCCAAGCATTCTTCTTGGAGTAACTCCGCAAGGGAACAACTGCCTCCACATATCCACCA
TTCATGGGCACGAAGAGTTCTGCTTGTATGCGTTGGCACTAGAGCGTTCTCTCCTTGAGAATGTCAACTGCGAGAACGAG
ACTCCGCTTGTAATTGCTGTTTCACTTGGCCATGCCTCTTTGGCTTCTAAATTGCTCCAGCAATGCTGTGGAAGACCACG
ATTGAGTCGAGCAATCTTGCAACAAGACAGGTATGGATTTAATGCACTGCACCATGCTATTCGCAACGGCCACAAGCAAC
TTGCGCTAGATTTGATAGCAGAAGAGCCTGCCCTGTCAGGAGCTGTGACCAGATACAATGAGTCACCCATGTTCATCGCC
GTGATGAGGAATTTTGTAGATGTTTTGGAAAACCTACTAGACATTGTCGATTCTTCTCATATGGGACAGTATGGATGCCA
TGCTCTTCATGCTGCAGCTAGAAATGGAAATAAAGGTGAGAACTGTGGAATATAAGTTA---------------------
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>chr3A_947
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--------------------------------------------------------AGATAGATGGCTGCCAATACACCG
ACAACTGATGCAACTGGAGGACAATCATCGATGGACGAACGGATCCTGAAAGCAGCCACCTTTGGTGTTTTCTGGGACAT
TGAGGTGTTGGCTACAAAGAGTCCAAGCATTCTTCTTGGAGTAACTCCGCAAGGGAACAACTGCCTCCACATATCCACCA
TTCATGGGCACGAAGAGTTCTGCTTGTATGCGCTGGCACTAGAGCGTTCTCTCCTTGAAAAGGTCAACTGCGAGAACGAG
ACGCCGCTTGTCATTGCTGTTTCACTTGGCCATGCCTCTTTGGCTTCTAAATTACTGCAGCAATGCTGCAGAAGACCACG
ATTGAGTCGAGCAATCTTGCAACAAGACAGGTATGGATTTAACGCACTGCATCATGCTATTCGCAATGGCCACAAGCAAC
TTGCACTGGATTTGATAGCAGAAGAGTCTGCCCTGTCGAGAGCTGTGACCAAGTACACTGAGTCACCCATGTTCATCGCC
GTGATGAGGAATTATGTAGATGTTTCTGAAAAGCTACTAGACGTTGATGATTCTTCTGATGTTGGACAGTATGAACGCCA
TGCTCTTCATGCTGCAGCGAGAAATGGAAATAAAGGTGAGACCTGTTGAATACAAGTTA---------------------
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>chr3B_2108
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-----------------TTGACATGCCTTCATACAGCTGTATGTAACGGTCATCCGGAGTTTGTTGAATTTATACTCAGG
ACACCACAACTCCGGAAACTCATTAACATGCGAGACAGCAGTGGAAGAACAGCTCTACACTATGCAATCGAGAAGTGCAA
TCCAAAAACTGTTGCTGCTGTACTGGCTCACGAGGGTAT---AGACACAACAATACGTGACCTTAATGGTAAATCAGCAG
CTTCCCAATTGGCATGCAACACCGACCATGACAAGAGTTTAGACTGGGTATGTTTCTATATATGCTATCAATATATCATT
CGAAATGATAA---GATTTATTATTACACTGCCATGAGCCCATTATTTTGCAAGTTAGTTATAAG---------------
-------------TTTTGAATTTATGCAGATGGAAGTGCACGCACTTATGTTGCAAGCTAATCCCCAAGATGATGACATA
TGTTCTTATCTCTTCATG-AGGGAATCGAGCAAAATGAAACTATTGAATCGAAGGATGAGACACATACAAGTGCCACGGC
TAACGTGAAGTCACTAACTCAAAAATACACAAGCAACACATCACTAGTGGCCATCCTCCTTGCAACAATCACCTTCACCG
CAGCTTTCACTCTGCCAGGAGGATACAGCAGTACTGCTGGAAGCGAGGGGCTTCCTATCATGTACAAAAATACTGCATTT
CAAGTATTCCTGGTCTCTGACACGTTAGCAATGTGCTCTGCATTTGTTGTGGCATTTATATGCCTCATGGGAAGGTGGGA
GGATGATAGGTTCACGGATTATTACATCACCGTCACTAAGAAGCTTACTTGGTTTGCATACATGGCAACACTTGCGGCCT
TCGCAGCTGGTTTATACACGGTACTAGCCCATCATCGCCAGTGGCTGGCCATTGCGATTTGTGCTCTGATAGGGTTTTGC
CCTTGTCTAACTTTGCTCATAAGTAAATGGCCTATCTTAAAGCTCAATTATCG---------------------------
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>chr1D_2140
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-------------------------------------------------TCATGCAGAGTTCACCGAATTTATCCTGAGG
ACACCGCAGCTTCGCAAAGTCATTAACATGCAAGACAACCAAGGAAAAACCCCTCTACATTATGCAGTCCAAAGTTGCAA
TCCTAAAATAGTCGCTGCCTTACTGTCTCACGAGGATAT---AGATGTAACAATGATCGACAACAATGGTGATCCAGCAA
CTTGGGAACTGTGGAAGGTCATACAGAATGCCAAAACTTTAAACTGGGTACGTA------TGT-----------------
---TATCTTTT---AATTCATGTAGAATGAATTGTGCATGCTTATGGTATAAGGTCATTTGTACCCAGAATGAGGTCATT
TGTACCTTCCCTTTTATTAATTCATGCAGAATGAAGTGTGCATGCTTATGCTAAAAGCGAATCCTCAACATACTGGATCT
ATTTATAA--TCTTCATC-GGAAAGCCAAGCAAGAGGCGACTAATGCATCAAGGAAGGATGCA-----------------
-------AAATCACTAACTCAAATATACACAACCAACACTTCGTTAGTAGCAATCCTCATTACGACAATCGCCTTTGCTG
CCGCGTTCACCCTACCTGGAGGATACAGCAATGGCGCTGGAAGCGAAGGACTTCCCGTCATGTCTCGCAAGGTTGCATTT
CAGGCATTCTTGATCTCTGACACCTTAGCAATGTGCTCTTCATTTGCTGTCGCCTTCATATGCATCATGGCAAGGTGGGA
GGATTACGAGTTCTTGGTTTACTATAGATCATTTACTAAGAAGCTCATGTGGTTTGCATATGTGGCAACTACCACAGCCT
TTTCAACTGGTTTATATACGGTGTTGCCCCGACATCTCCACTGGTTGGCCATTGCAATTTGCATTACAGTAGCTTTGTTG
CCCATTCTCACGAAGCTGCTGGGCGAATGGCCTGTCTTGA----------------------------------------
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---------------------------------------
>SNPs
-----------S----------------------------------------------S---S------------S---S
----------------S-S-------------------S---S-S-S--------------S-----S----------S-
----------------S---------------S---------S-SS-------S---------------S-----SS---
------S-S-----S---S-------------------------------------------------------------
------------S----------S---------------------------S----------------------------
S-------------------S-----S----------------------------------SS----------------S
-----S-S------------------------------------------------S--S--------------------
-S----------------------------S------S------------------------------------------
---S--------S----------S-------SS----S--------------------------------S---SS----
------------------S-------------------------------------------------------------
---S-------------SS---------S----------S------------------SS--------------------
----------------S---------------------------------------------------------------
-S---------------------------------------------------------------------------S--
------------------------------------------------------------SS------------S-----
--------S-------S--------S------------------------------------------------------
----------------S----------------------------S----------S-----------------------
---------S----------S--------------S-------S----S--------S--------S-------------
------------------------------------------------S---------------------S-------S-
-----------------S----------S--------S------------------------------------------
--------------------------------------------------------S-----------------------
-------------------------------S--------------------------------------S---------
--------------------S-----------------------------------------------S-----------
----S----------------------S-------------S-------------S-------------------S----
---S--------------------S------------------S---------------S-------S----S------S
---S----------------------------------------S--------S--S--S-S------------------
SS--S-------S--S------S--------------------------S---------------------S--------
-----------------------S--------------------SS----------------S-----------------
---------S----------------------------------------------------------------------
-------------------------------------------------S------S-----------------------
------------------------------S-----------------S-----------------------S-------
-------------------S--------S----------------------S----------------------------
S--------------------------------------S-S-S------------------------------------
---------------------------------------------------S-SS------------S------------
----------------------S---------------------------------------------------------
------------S-S-----------------S------S-----S----------------------------------
-------------------------------------------S------------------------S-----------
-------------------------------------------------S------------------------------
-----S---SS---------------------------------------------------------------------
--------------------------S--S-----S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-S---------------S-----------------------S---SS---------S---------------------S-
----------------------S---------S-------SSSS------------S----------------S------
---S---------------------S------------------S--S--------------------------------
----------------------------------------------------S---------------------------
-----------------------------S-------SS
>forward_678
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------------------TCTTCGTTGTGTGACTGCGT------------------------------------------
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>reverse_2663
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----------------------TAGCCAAGCAACGGGAAACT--------------------------------------
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