>input_sequence_49853
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------------------------------------------------------------------------------AT
GGCGTAAGTTCTCCCGCAGAAAGAAACCTTGGCACTGCTCGTTTCTGTAGTCTTGATTGCAGTGGTGTGCTGCAGATATT
AAATCCGATACGTGTTGTTATCTTGTTTGTAACTTGCGGGTGCTTTTGGGCTACTTATGAAATCTCAGTGTTGGTTTGTG
CTCTTAACATCCAGGGGCGCAATTGTTTATTTTGTCGTTGGTTGGTCTTCTCCAATTAACACTGATACACATGTGTTATT
TGTTGGGCGTTTCGGTATTGTCTTTAGAATGATTTTAATCTGCAAGTAGTTGTGAAGCAGATTGTTTAGTACTAGTTGCC
TTCATGATTATTACATATTACAGTATAAGATACTAGCTGAAATTTCAAAAATAATAATAGCTGTTTTACTCTGCTTGCAA
ATTACAGCTGCTTTCAATAGTGTGTCCCTCCTTGTGATTTTACACTTTTGAACGATCTCTATTGTGATCTACCTACGGTG
CAAGATAGTTGTGGTACTTAATTGTTTAATCTCGTATCCCCCGCAAAAAGAAAAAAAATCTCCTATGGCATGTAGATTAA
TGTAACATGCTGGTACCTGCTTGCCCAAACTAAAGAGTAGCTATGAACATATAGAAAACTAACAGCTTGAATTGC---GG
TAAACACAGATTTTTAAACTGCTGGTTAGAGTGTGTAACCTCTGTTCTTTAT---------CCTCGTATCATGCTATTCA
TGTCATGAGTTATTACTCTTTGCAGGGAAGAAGCCCCGACACCAGTTGTTGCCCCAGTAGAGGCACCTACCCCGGTTCTT
GGTGAGCCGATGGACTTGATGACTGCTCTACAGCTTGTCATGAAGAAGTCAAGTGCTCATGATGGCCTTGTGAAGGGGCT
CCGTGAGGCTGCCAAGTCCATTGAGAAGCATGCTGCTCAGCTTTGTGTGCTGGCTGAGGATTGTGACCAGCCTGATTACG
TGAAGCTCGTTAAGGCACTATGCGCTGAGCACAATGTTCACCTGGTTACTGTGCCAAGTGCTAAAACTCTTGGAGAGTGG
GCAGGGGTGAGTTTTCTAATGCCAATTTGTAATGTTCCATCTTATTATACTTAATTGCAGCATGTATTCCACATTCATCT
TTTGGACATAGCAATGCTTCACTATTGCTGGAGAATGCACTTGCTCTTGATATTAAAATTCTTTTGTTTCCCTATGCTTC
TCTTGTAAGTTGTTTTAGCTTTTCGTTGT------TTCTTCACGTATGTCGTGGAAGTATTGATGTTTTGATATTAACAT
GCTTTCCTCTGCAGCTTTGCAAGATTGACTCTGAGGGCAAGGCAAGGAAGGTTGTGGGCTGCTCTTGCGTTGTTGTCAAG
GTGACAAATCTACTATAAACTGATACGACCAAAGGACAGGTTTCTTTTCAAGTAGACAGAACTTGTCGTTTGACTGATTT
CTTTGATTTACCAGGACTATGGTGAAGAATCCGAGGGCCTTAACATCGTGCAGGAGTACGTCAAGTCTCACTAG------
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>chr2D_1_TraesCS2D01G237800
CATTTTTTGAATATTGAGAACAAATTTTGAAAAGGATAACAAATTTGAAAAATCCCGAACAAATTTGGAAGCGCGAACAT
TTTTT-GAAAACGTGAACAAAA-TAATTGAAGTCTAGT--ACATTATATTAATTTTGAAAGTGTTGAACTTTTTTGTGTA
ACGAGAACAATTTTTGAATTTTGAGAACATTTTTTAAAAAA-CTGAACATTTTATGAAAAGGCAAACAAAATTTGAATAT
TTTGAA-AAAAA--G----AGAAAATAAAAATAAAAATAAATAAGAAACCAAAGAAAGAAAACAAACAGAAAAAA-CGAA
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGCAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAG
GAATTGAAAA-ATGAAATAAAGAAACAGAAAAACAAAGAAAGAAGAAAAGAAA----AGAGAAAGAAAAAAA--------
---AACA--A----AAAAAAAACGGTTCAAGAACCTTCTGGAAGGTTCCCAAAACCGGTCAGGAACCTTCGAGAAAGTAC
CCAATACCGGATACTGTAGCGCGTGTACTATCTCGTAGTTGGGCCGGCCCATCATGATCGCTAGGTCGCTCGTCTCTGTG
CGTTAGCTC-GACATTCTGCCGCAATGAGCGTCCGTTAGGATATTCTCGTTTTGTATCTCCCCGGTCGTGCATTTTTTCA
TGGGCTGGTTGCAGTTAAGATACCTTCTAGGGCTTTCTCAGCCCAACAGAAGCGTTGTCCCCGGCCCGTCTCCAAAGAGC
TATATAACTTACACGTTCTCCCAGCCGTCAAGAACACCTGCCCTACTCGCGAAAACCCTACCGCCGCCGCTCTCCATTCT
CCAAGGTCCCAAGGTGGCGGCGCTGTGTCCTCACCGTACTTCTT-CTTTTCTTTCTTGCATCTAACCTCGCTAATCGCTG
CTATCATTTCGCTTTGTTGCTCCAGGCTCCAGATCTCCCTCCTTCGCAGCTGCCTCGGTGGCCTTTGGAGCGCACGAGAT
GGCGTAAGTTCTCCCGCAGAAAGAAACCTTGGCACTGCTCGTTTCTGTAGTCTTGATTGCAGTGGTGTGCTGCAGATATT
AAATCCGATACGTGTTGTTATCTTGTTTGTAACTTGCGGGTGCTTTTGGGCTACTTATGAAATCTCAGTGTTGGTTTGTG
CTCTTAACATCCAGGGGCGCAATTGTTTATTTTGTCGTTGGTTGGTCTTCTCCAATTAACACTGATACACATGTGTTATT
TGTTGGGCGTTTCGGTATTGTCTTTAGAATGATTTTAATCTGCAAGTAGTTGTGAAGCAGATTGTTTAGTACTAGTTGCC
TTCATGATTATTACATATTACAGTATAAGATACTAGCTGAAATTTCAAAAATAATAATAGCTGTTTTACTCTGCTTGCAA
ATTACAGCTGCTTTCAATAGTGTGTCCCTCCTTGTGATTTTACACTTTTGAACGATCTCTATTGTGATCTACCTACGGTG
CAAGATAGTTGTGGTACTTAATTGTTTAATCTCGTATCCCCCGCAAAAAGAAAAAAAATCTCCTATGGCATGTAGATTAA
TGTAACATGCTGGTACCTGCTTGCCCAAACTAAAGAGTAGCTATGAACATATAGAAAACTAACAGCTTGAATTGC---GG
TAAACACAGATTTTTAAACTGCTGGTTAGAGTGTGTAACCTCTGTTCTTTAT---------CCTCGTATCATGCTATTCA
TGTCATGAGTTATTACTCTTTGCAGGGAAGAAGCCCCGACACCAGTTGTTGCCCCAGTAGAGGCACCTACCCCGGTTCTT
GGTGAGCCGATGGACTTGATGACTGCTCTACAGCTTGTCATGAAGAAGTCAAGTGCTCATGATGGCCTTGTGAAGGGGCT
CCGTGAGGCTGCCAAGTCCATTGAGAAGCATGCTGCTCAGCTTTGTGTGCTGGCTGAGGATTGTGACCAGCCTGATTACG
TGAAGCTCGTTAAGGCACTATGCGCTGAGCACAATGTTCACCTGGTTACTGTGCCAAGTGCTAAAACTCTTGGAGAGTGG
GCAGGGGTGAGTTTTCTAATGCCAATTTGTAATGTTCCATCTTATTATACTTAATTGCAGCATGTATTCCACATTCATCT
TTTGGACATAGCAATGCTTCACTATTGCTGGAGAATGCACTTGCTCTTGATATTAAAATTCTTTTGTTTCCCTATGCTTC
TCTTGTAAGTTGTTTTAGCTTTTCGTTGT------TTCTTCACGTATGTCGTGGAAGTATTGATGTTTTGATATTAACAT
GCTTTCCTCTGCAGCTTTGCAAGATTGACTCTGAGGGCAAGGCAAGGAAGGTTGTGGGCTGCTCTTGCGTTGTTGTCAAG
GTGACAAATCTACTATAAACTGATACGACCAAAGGACAGGTTTCTTTTCAAGTAGACAGAACTTGTCGTTTGACTGATTT
CTTTGATTTACCAGGACTATGGTGAAGAATCCGAGGGCCTTAACATCGTGCAGGAGTACGTCAAGTCTCACTAGATGAGA
ATGTTTCATGATGCAAACATTTGGGTTGGGCATTTTTGTCCTCGGTTTCATTTATGCTTTATTCTTGGGCTTCCTATTGT
TCCAACTTTCAAGTGTGAGCCTAGCAGATATCGTCGATTTGGACCTCTGAACCTTTGTTTATCAGGCAGCTGCTGCCTTC
AGCGTAAATCATCAAGAGCTAATAATATATTTCTCTTTGCAATATCACAATTTTGATGTTTTGCTCTGTCGCTGTTGCAT
GTTCCATTTGACATCATTGTGTTTGTGCCTATTACT--------------------------------------------
---------------------------------------------------------------------------TATAT
TTGGTTATGGCGGTGAT-G-TATAAATTAGCAAAAGAAATAGCGCTCCAAATTGTTTGAGCTGATCCCACGAATTCACAG
TGTCCATTTAAGATGCTTGCTCATTTAGATGCCTGCGAAGTTCTGAGTTTGAAGGAGCTCTGTAGGAGAAATAAAAATTG
GGCTCCAAATTGTTTGAAATTCTGACAAAATTTTGTTTGTTAACCTTTATTGAATTCTTTTTAGCTGCTATTTTCTTGAT
TTAA-----ACGAGAAGGAGCATATGTGCTATGAATTTGTACGCGAGAATCCTC---ATGTGCTGTAAATTTGTACAAAC
TATGAAGTGCCTCTGGACGCTAAAGACATTTCTAGGCTTCCCATAGAAGTTCCTTCTCA--AAACCTAAACGCCTATACC
TTCTCCTTTCCTATTTCTTTTCTATTTCTTTAATGTATCAAGTTTCTAATTACTACTTCAAATGCACACATTTCAACAAA
ATTTAGGTTTTTAGTGTTTTCA--------------------------------AGTCCAAACGAAGTAAAACTAATAAT
AAAATGTTGTAAAAACACAAAAGCAAGAACTATGGATTGCCACAAGTGGCAAACAAGAACAATGTGAGGTCTGGCTCCAC
GTCATTGATGATACATGTTCTCATGATCCGCTCCAATAACTTGGGGTCCCAATACTTCATAGCGCCATGTTCACAATTGC
AAAACGAGCTTGAAGGATCCCCAAAACCTCTCTCAAT
>chr2D_1
CATTTTTTGAATATTGAGAACAAATTTTGAAACGGAGAACAAATTTGAAAAATCCCGAACAAATTTGGTAGCGCGAACAT
TTTTT-GAAAACGTGAACAAAA-TAATTGAAGTCTGGT--ACATTATATTAATTTCGAAAGTTTTGAAATTTTTTGTGTA
ATGAGATTTTTGTTTGAATTTTGAGAACATTTTTTAAAAAA-TTGAACATTTTATGGAAAGGCAAACAAAATTTGAATAT
TTTTAA-AAAAA--G----AGAAAAGAAAATGAAAATGAAATAAGAAACCAAAGAAAGAAAACAAACAGAAAAAAACGAA
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGCAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAGG
AATTGAAAAA--TGAAATAAAGAAACAGAAAATCAAAGAAAGAAGAAAA--AA----AGAGAAAGAAAAAAT--------
---AAATAGA----AAAAAAAACGGTTCAAGAACCTTCCGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CCAAAACCGGATACTGTAGCGCGTGTACTATCTCGTAGTTGGGCCGGCCCATCATGATCGCTAGGTCGCTCGCCTCTGTG
CGTTAGCTC-GACATTCTGCCGCAGCGAGCGTCCGTTAGGATATTC----------------------------------
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>chr2D_1
CATTTTTTTAATATTGAGAAAAAAATTTGAAACAGAGAACCAATTTGAAAAATCCCGAACAAATTTGGAAGGGTGAACAT
TTTTT-GAAAATGGGAACAAAA-AAATTAAAGTCTGGT--ACATTATATTAATTTCGAAAGTTTTAAACTTTTTT-TGTA
ACGAGAACAATTTTTGAATTTTGAGAACATTTTTAGAAAAAACTGAACATTTTATGGAAAGGCAACCAAAATTTGAATAT
TTTGAA-AAATA--G----AGAG----AAAAGAAAAAGAAATAAGAGACCAAAGAAAGAAAACAAACAGAAAAAA-CGAA
AAAAGAAGAAATGAAAAAAGAAACAGAAAGGAATTTGAAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAG
GAATTGAAAA--TGAACTAAAGAAACAGAAAAACAAAGAAAGAAAAAAA--AGAAACAGAAAAAGAAAAAGAAAAA----
CT---------GTG--AAAAACTGGTTCAAGAACCTTCTGGAAGGTTCTCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CCAAAACCAGATACTATAGCGCGTGTACTATCTCGTAGTTGGGCCGGGCCATCTTGATTGCTAGGTCGCTCGCCTCTGTG
GGTTCGCTC-GACTTTCTGCCGCAATGATCGTCCGTTAGGATATTC----------------------------------
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>chr7A_1
CATTTTTTGAATATTGAGAACAAATTTTGAAACAGAGAACAAATTTGAAAAATCCCGAACAAATTTGGAAGCGCGAACAT
TTTTT-GAAAACGTGAATGAAA-TAATTGAAGTCTGGT--ACATTATATCAATTTGGAAAGTTTTGAACTTTTTTGTGTA
ACGAGAACAATTTTTGAATTTTGAGAACATTTTTTAAAAAA-CTGAAAATTTTATGGAAAGGCAAACAAAATTTGAATAT
TTTGAA-AAAAAAGAGAAAAGAG----AAAAGAGAATGAAATAAGAAACCAAAGAAAGAAAACAAACAAAAAAAT--GAA
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGCAAATCTGAAGAACAAAAAGGGAAATAGAAAGAGAAGAAAAAG
GAATTGAAAA-ATGAAATAAGGAAACAGAAAAACAAAGAAAGAAGAAAA--AA----ATAGAAAGAAAAAAT--------
---AAACAGAAAAAGAAAAAACTGGTCCAAGAACCCTCTGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTTC
CCAAAACCGGATAATGTAGCGCGTGTACTATCTTGTAGTTGGGCCGGCCCATCGTGATCGCTAGGTCGCTCGCGTCTGTG
CGTTAGCTC-GACATTCTGCCGCAATGAGGGTCCGTTAGGATATTC----------------------------------
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>chr5D_1
CATTTTTTTAATATTGAGAACAAATTTTGAAACGGAGAACAAATTTGAAAAATCCCGAACAAATTTGGAAGCGCGAACAT
TTTTT-AAAAACGTGAACAAAA-TAATTGAAGTCTGGT--ACATTATATTAATTTCAAAAGTTTTGAACTTTTTTGTGTA
ATGAGAAATTTTTTTGAATATTGAGAACATTTTTTTTAAAAATTGAACATTTTATGGAAATGCAAACAAAATTTGAATAT
TTTGAA-AAAAA--G----AGAAAAGAAAAAGCAAATGAAATAAGAAACCAAAGAAAGAAAACAAACAGAAAAAAGG--A
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGCAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAG
GAATTGAAAA-ATGAAATAAAGAAACAGAAAAACAAATAAAGAAGAAAA--AA----GAGAAAGAAAAAAAT--------
---AAACAGAAAAAGAAAGAACCGGTTCAAGAACCTTCCGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CCAAAACCGGATACTGTAGCGCGTGTAATATCTCGTAGTTGGGCCGGCCCATCATGATCGCTAGGTCGCTCGCCTCTGTG
CGTTAGCTC-GACATTCTGCCGCAGTGAGCGTCCGTTAGGATATTC----------------------------------
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>chr3D_1
CATTTTTTGAATATTGAGAACAAATTTTGAAACGGAGAACAAATTTGAAAAATCCCGAACAAATTTGGAAGCCCGAACAT
TTTTT-GAAAACGTGAACAAAA-TAATTGAAGTCTGGT--ACATTATATTAATTTCGAAAGTTTTGAACTTTTTTGTGTA
ATGAGAATTTTTTTTGAATTTTGAGAACATTTTTTAAAAAA--TGAACATTTTATGGAAAGGCAAACAAAATTTGAATAT
TTTGAA-AAAA---------------AAAGAGAAAATGAAATAAGAAACCAAAGAAAGAAAACAAACAGAAAAAAA-GAA
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGCAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAG
GAATTG-AAA-ATGAAATAAAGAAACAGAAAAACAAAGAAAGAAGAAAA--AA----AGAGAAAGAAAAAAATAAA----
CAGAAAA--A----GAAAAAACCGGTTCAAGAACCTTCCGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CAAAAA--GGATACTGTAGCGCGTGTACTATCTTGTAGTTGGGCCGGCCCATCATGATCGCTAGGTCGCTCGCCTCTGTG
CGTTAGCTC-GACATTCTGCCGCAGTGAGCGTC-----------------------------------------------
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>chr3B_2
-ATTTTTTGAATATTAAGATTTT-TTTTGAAATGGAGAACAAATTTAAAAAATCCCGAACAAATTTGGAAGTGCGAACAT
TTTTT-GAAGACATGAACAAAACAAATTGAAGTCTGGT--ATATTATATTAATTTCGAAAGTTTTGAACTTTTTTGTGTA
ACGAGAACAAATTTTGAATTTTGAGAACATATTTGAAAAAA-CTGAACATTTTATGGAAAGGCAAACAAAATTTGAATAT
TTTGAA-AAAAG--G----AGAAAAGAAAAAGAAAATGAAATAAGAAACCAAAGAAAGAAACCAAACTG-AAAAA-CGAA
AAAAGAAGAAAATAAAAAAGAAACAGAAAGGAATTTGAAAATCTGAAGAACAAAAAGG-AAATTGACAGAGAAGAAAAAG
GAATTGAAAA-ATGAAATAAAGAAACAGAAAAACAAAGAAAGAAGAAAA--AA----AGAGAAAGAAAAGGAAAAAA--C
---------CAGTG--AAAAACCGGTTCAAGAACCTTCTGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CCAAAACCGGAT---GCAGAGCATGTACTATCTCGTAGTTGGGCCGGGCAATCTTAATCGCTAGGTCGCTCGGCTCTGTG
CGTTCGCTC-GACATTCTGCCGCAATGAGCGTC-GTTAGGATATTC----------------------------------
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>chr2B_4
---TTTTTGAATATTGAGAACAAATTTTGAAACAGAGAACAAATTTG-AAAATCCCGAACAAATTTGGAAGCGCGAACAT
TTTTT-GAAAATGTGAACAAAA-AATTTGAAGTCTGGTAAACATTATATTAATTCTGAAAGTTTTGAACTTTTTTGTGTA
ACAAGAACAATTTTTGAATTTTGAAAACATTTTTGAAAAAG-CTGACCATTTTATGGAAAGGCAAACAAAATTTGAATAT
TTTGAATAAAAG--G----AGAAAATAAAAAGAAAAAGAAATAAGAAACCAAAGAAAAAAAC--AACAGAAAAAA-CGAA
AAA-GAAGAAAAG-AAAAAGAAACAGAAAGGAATTTGAAAATCTGGAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAG
TAATTG-AAAAATGAAATAAAGAAACAGAAAAACAAAGAAAGAAGAAAA--AA----AGAAACAGAAAAAGAAAAA----
GAAAAAA--CAATG--AAAAACCGGTTCAAGAACCTTCTGGAAGGTTCCTGGCCGGTTTTGGGAACCTTCTAGATAGTAC
CCAAAACCGGTTACCGTAGCGCATGTACTATCTCGTAGTTGGGCCGGCCCATCTGGATCGCTAGGTCGCTCGCCTCTGTG
CGTTCGCTCTGACATTCTATCGCAGTGAGCGCCCGCTAGGATATTC----------------------------------
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>chr3D_18
GAACA---------------TTT-TTTGAATATTGAGAACAAAATTGAAAAATCCTGAACAAATTTGGAAGCGCGAACAT
TTTTT-GAAAACGTGAACAAAA--AATTGAAGTCTAGT--ACATTATATTAATTTCGAAAGTTTTGAACTTTTTTGTGTA
ACGAGAACAATTTTTGAATTTTGAGAACATTTTTTAAAAAA-CCAAACATTTTATGGAAAGGCAAACAGAATTTGAATAT
TTTTAA-AAAAAAAG----AGAAAGGAAAAAGAAAATGAAATTAGAAACCAAAGAAAGAAAACAAACAGAAAAAA-CGAA
AAAAGAAGAAAAGAAAAAAGAAACAGAAAGGAATTTGAAAATCTAAAGAACAAAAC-GGAAATAGAAAGAGAAGAAAAAG
GAATTGAAAA-ATGAAATAAAGAAACAAAAAAACAAAGAAAGAAGAAAA--AA----AGAAACAGAAAAAGAAAAAAACC
CT---------ATG--AAAAACCGGTTCAAGAACCTTCTGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAAAGTAC
CCAAAACTAGATACTGTAGTGTGTGTACTATCCCGTAGTTGGGCCGGCCCATCTTGATCGCTAGGTCGCTCGCCTCTGTG
CGTTCGCTC-GACATTCTGCCGCAATGAGCGTCTGTTAGGATATTC----------------------------------
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>chr3B_57
--------------------------------------------------------GAACAAATTTGAAAGTGCGAACAT
TTTTTTGAAAACATGAACAAAA-AGACTAAAGTCTTGT--ACCTTATTTTAATTTTGGAAGTTTTGAACTTTTTTGTGTA
ACGAGAACAATTTTAGAATTTTGAGAACATTTTTTAGAAAA-CCGAACATTTTATGAAAAGGCAAACAAAATTTGAATAT
TTTGAA-AAAAAAGA-------AAAGAAAAAGAAATTAGAATAAGAAACCAAAGAAAGAAAACAAACAGTAAAAAC-AAA
AAAAGA-------AAAAAAGAAACATAAAGGAATTTGAAAATCTGAAGAACAAAAA-GGAAATAGAAAGAGAAGAAAAAA
CAATTG-AAAAATGAAATAAAGAAACAGAAAAACAAAGAAAGAAGAAAA--AA----AAGACAGAAAA-GGAAAAAAAAC
---------CAGTG--AAAAACAGGTTCAAGAACTTTCTGGAAGGTTCCCAAAACCGGTCAGGAACCTTCCAGAGAGTAC
CCAAAACCGGATACAGCAGCGCGTGTACTATCTCGTGGTTGGGCCGGTCCATCTTGATCGCTAGGTCGCTCGCCTCTGTG
CATTAGCTC-GACATTCTGCCGCAATGAGCGTCCGTTAGGATATTC----------------------------------
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>chr2B_551
ACTAT---------------------------------------------------------------------------
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--------------------------------TTGTAAGTGGGCCGGCCCATGTCGGTCGCTC-GCGGCCGCTCTCTGTG
CGATCCCTC-GAAATTC-GCCGCAGAGAGCGGCGAATAGGATTTTCC---TTTGTATCGGCCCGGTCGTGCGTTTTTTCA
TGGGCTGGTTACAGTTAAGATACCTTGTAGGGCTTTCTGAGCCCAACAGAAGCTTTGTCCCCGGCCCGTCTCCAAAGAGC
TATATAACTTACACGTTCTCCCAGCCG-----------TGCCCTACTCGCGAAAACCCTACCGCCGCCGCTCTCCA----
---AGGTCCCAAGGTGGCGGCGCTGTGTCCTCACCGTACTTCTTCCTTTTCTTCCTTGCATTTAACCTCGCTAATCGCTG
CTATCATTTCGCTTTGTTGCTCCAGGCTCCAGATCTCCCTCTCTCGCAGCTACCTCGGTGGCCTTTGGAGCGCACGAGAT
GGCGTAAGTTCTCCCGCCGAAAGAAACCTTGGCACTGCTCGTCTCTGTAGTCTTGATTGCAGTGGTGTGCTGCATATATT
AAATCCGATACGTGTTGTTATCTTGTTTGTAACTAGCGAGTGCTTTTGGGCTACTTATGAAATCTCAGTGTTGGTTTGTG
CTCTTAACATCCAGGGGCGCAATTGTTTATTTTGTCGTTGGTTGGTCTTCCCCAATTAACACTGATACACATGTGTTATT
TGTTGGGCATTTGGGTATTATCTTTAGAATGATTTTATTCTGCAAGTAGTTGGGAAGCAGATTGTTTAGTACCAGTTGCG
TTCATGATTATTAAATAT-----TATAAGATACTAGTTGAAATTTCAAAAATAATAATAGCTGTTTTACTCTGCTTGCAA
ATTACAGCGGCTTTCAATAGTGTG-CCCTCCTTGTGATTTTACACTTTTGAACGATGTCTATTGTGATCTACCTACGGTG
CAAGATAGTTGTGGTACTTGATTGTTTAATCTCGTATCCCCTGCAAAAGAAAAAAAAATCTCGTATAACATGTAGGTTAA
TGTAACATGCTGGTACCTGATTGCCCAAACTAAAGAGTAGCTATGAACATATAGAAAACTAACAGCTTGAATTGCGGTGG
TAAACACAGATTTTTAAACTGCTGGTTAGAGTGTGTAACCTCTGTTCTTTATGCTTGCTGTTCTCGTATCGTGCTATTCA
TGCCATGAGTTATCATACTTTGCAGGGAAGAAGCCCCAGCACCAGTTGTTGCCCCAGCAGAGGCACCTACCCCGGTTCTT
GGTGAGCCAATGGACTTGATGACTGCTCTACAGCTTGTCATGAAGAAGTCAAGTGCTCATGATGGCCTTGTGAAGGGGCT
CCGTGAGGCTGCCAAGTCCATTGAGAAGCATGCTGCTCAGCTTTGTGTGCTGGCTGAGGATTGTGACCAGCCTGATTACG
TGAAGCTCGTTAAGGCACTATGCGCTGAGCACAATGTTCACCTGGTTACTGTGCCAAGTGCTAAAACTCTTGGAGAGTGG
GCAGGGGTGAGTTTTCTAATGCCAATTTGTAATGTTCCATCTTATTGTACTTAATTGCAGCATGTATTCCACATTCATCT
TT-GGACTTAGCAATGCTTCACTATTGCCGGAGAATGCACTTTCTCTTGATATTAAAATTCTTTTGTTTCCCTATGCTTG
TCTTGTAAGTTGTTTTAGCTTTTTTGTTGTAGTTATTCTTCACGTTTGTCGTGGAAGTATTGATGTGTTGATATTAACAT
GCTTTCCTCCGCAGCTTTGCAAGATTGACTCTGAGGGCAAGGCAAGGAAGGTTGTGGGCTGCTCTTGCGTTGTTGTGAAG
GTGACAAATCTACTATATACTGATATGACCAAAGGACAGGTTTCTTTTCAAGTAGACAGAACTTGACGTTTGACTGATTT
CTTTGATTTACCAGGACTACGGTGAAGAATCCGAGGGCCTTAACATCGTGCAGGAGTACGTCAAGTCTCACTAGATGAGA
ATGTTTCATGATGCAAACACTTGTGTTGGGCATTTTGGTCCTCGGTTTCATTTATACTTTATTCTCGGGCTTCCTATTGT
TCGAAGTTTCAAGTGTGAGCCTAGCAGATATCGTCAATTTGGACCTCTGAACCTTTGTTTATCAGGCAGCTGCTGCCTTT
AGCGTAAATCATCAAGAGCTGATAATATATTTCTCTTTGCAATATTACAATTTTGATTTTTTGCTCTGTCGCTGTTGCAT
GTTCCATTTGACATCATTGTGTTTGTCCCTATGACT--------------------------------------------
---------------------------------------------------------------------------TATAT
TTGGTTATGGCGATGATGG-TATAAATCAGCAAAAGAAATAGCGCTCCAAATTGTTTGAGCTGACCCCCCAAATT--CAG
TGTGCATTTAAGATGCTTCCTCATCCAGATGCCTGTGAAGTTCTGAGTTTGAAGGAGCTCTGTAGGAAAAACAAAAATTG
GGCTCCAAATTGTTTGAATTCCTGACAAAATTTTGTTTGTTAACCTGTATTGAATTCTTTTTAGCTGCTATTTTCTTGAT
TTTACCTTCACGAGAAGGAGCATATGTGCTGTGAATTTGTACACGAGAATCCTCAATATATGCTGTAAATTTGTACAAAC
CACAAACTGCCTATAGATGCTGAAGACATTTCTAGGCTTCCCATAAATGTTCCTTCTCCTTAAACCTAAATGCCTATACT
TTTTCCTTAA-----------CTATTTCTTTAATGTATCAAGTTTCTAATTACTACTTCAGATGCACACATTTCAACAAA
ATTTAGTTTTTTAGTGTTTTCAAGTCAAAATATTCAAATTGAAATGGAAATTAGAGTCCAAACGAAGTAAAACTAAAAAT
AAAACTTGGTAAAAACACAAAAGCAAGAACTATGGATTGCCACAAGTGGCAAACAAGATCAATGTGAGGTTTGGCTCCAC
GTCATTGGTGATGCATGTTCTCATGATCTGCTCACTT------GGGTCCCAATACTTAATTGGGCCGTGT----------
-------------------------------------
>chr2A_652
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------------------------------------------------GTTTTGTATCTCCCCGGTCGTGCGTTTTTTCA
TGGGCTGGTTACAGTTAAGATACCTTCTAGGGCTTTCTGAGCCCAACAGAAGCGTTGTCCCCGGCCCTTCTGCAAAGAGC
TATATAACTTACACGTTCTCCCAGCCGTCAAAAACACCTGCCCTACTCGCGAAAACCCTACCGCCGCCGCTCTCCA----
---AGGTCCCAAGGTGGCGGCGCTGTGTCCTCACCGTACTTCTTC-TTTTCTTTCTTGCATCTAACCTCGCTAATCGCTG
CTATCTTTTCGCTTTGTTGCTCCAGGCTCCAGATCTCCCTCCTTCGCAGCTGCCTCGGTGGCCTTTGGAGCGCACGAGAT
GGCGTAAGTTCTCCCGCAGAAAGAAACCTTGGCACTGCTCGTTTCTGTAGTCTTGATTGCAGTGGTGTGCTGCAGATATT
AAATCCGATACGTGTTGTTATCTTGTTTGTAACTTGCGAGTGCTTTTGGGCTACTTATGAAATCTCAGTGTTGGTTTGTG
CTCTTAACATCCAGGGGCGCAATTGTTTATTTTGTCGTTGGTTGGTCTTCTCCAATTAACACTGATACACATGTGTTATT
TGTTGGGCGTTTCGGCATTGTC-TTAGAATGATTTTAATCTGCAAGTAGTTGTGAAGCAGATTGTTTAGTACTAGTTGCG
TTCATGATTATTACATATTACAGTATAAGATACTAGCTGAAATTTCAAAAATAATGATAGCTGTTTTACTCTGCTTGCAA
ATTACAGCTGCTTTCAATAGTTTGTCCCTCCTTTTGATTTTACACTTTTGAACGATCTCTATTGTGATCTACCTACGGTG
CAAGATAGTTGT-------------TTAATCTCGTATCCCCCGCAAAA-----AAAAATCTCGTATGGCATGTAGATTAA
TGTAACATGCCGGTACCTGATTGCCCAAACTAAAGAGTAGCTATGAACATATAGAAAACTAACAGCTTGAATTGC---GG
TAAACACAGA--TTTAAACTGCTGGTTAGAGTGTGTAACCTCTGTTCTTTATGCTTGCTGTCCTCGTATCATGCTATTCA
TGCCATGAGTTATCACTCTTTGCAGGGAAGAAGCCCCGACACCAGTTGTTGCCCCAGTAGAGGCACCTACCCTGGTTCTT
GGTGAGCCAATGGACTTGATGACTGCTCTACAGCTTGTCATGAAGAAGTCAAGTGCTCATGATGGCCTTGTGAAGGGGCT
CCGTGAGGCTGCCAAGTCCATTGAGAAGCATGCTGCTCAGCTTTGTGTGCTGGCTGAGGATTGTGACCAGCCTGATTACG
TGAAGCTCGTTAAGGCACTATGCGCTGAGCACAATGTTCACCTGGTTACTGTGCCAAGTGCTAAAACTCTTGGAGAGTGG
GCAGGGGTGAGTTTTCTAATGCCAATTTGTAATGTTCCATCTTATTATACTTAATTGCAGCATGTATTCCACATTCATCT
TT-GGACTTAGCAATGCTTCACTATTGCTGGAGAATGCACTTGCTCTTGATATTAAAATTCTTTTGTTTCCCTATGCTTG
TCTTGTAAGTTGTTTTAGCTTTTCGTTGT------TTCTTCACGTTTGTCGTGGAAGTATTGATGTGTTGATATTAACAT
GCTTTTCTCTGCAGCTTTGCAAGATTGACTCTGAGGGCAAGGCAAGGAAGGTTGTGGGCTGCTCTTGCGTTGTTGTCAAG
GTGACAAATCTACTATAAACTGATACGACCAAAGGACGGGTTTCTTTTCAAGTAGGCAGAACTTGACGTTTGACTGATTT
CTTTGATTTACCAGGACTACGGTGAAGAATCCGAGGGCCTTAACATCGTGCAGGAGTATGTCAAGTCTCACTAGATGAGA
ATGTTTCATGATGCA----CTTGTGTTGGGCATTTTGGTCCTCGGTTTCATTTATGCTTTATTCTTGGGCTTCCTATTGT
TCCAAGTTTCAAGTGTGAGCCTAGCAGATATCGTCGATTTGGACCTTTGAACCTTTGTTTATCTGGCAGCTGCTGCCTTC
AGCGTAAATCATCAAGAGCTGATAATATATTTCTCTTTGCAATATCACAATTTTGATGTTTTGCTCTGTTGCTGTTGCCT
GTTCCATTTGACATCATTGTGTTTGTGCCTATTACTCCCTCCGTCCCAAAATTGTCTTAGATTAGTCTAGATACCGATGT
ATCTAATACTAAAACGTGACTTGTACATTCGTATTTAGACAAATCTAAGACGAATTTTGGGACAGAGGGAGTACTTATAT
TTGGTCATGGTGGTGAT-GGTATAATTTAGCAAAAGAAATAGCGCTTCAAATTGTTTGAGCCGATCCCACAGATT--CAG
TGTCCATTTAAGATGCTTGCTCATTTAGATGCCTGTGAAGTTCTGAGTTTGAAGGAGCTCTGTAGGAAAAACAAAAAATG
GGCTCCAAATTGTTTGAAATTCTGACAAAATTTTGTTTGTTAACCTTTATTGAATTCTTTTTAGCTGCTATTTTCTTGAT
TTT-----CACGAGAAGGAGCATATGTGCTATGAATTTGTACACGAGAATCCTT-ATATCTGCTGTAAATTTGTACAAAC
TATAAAGTGCTTGC------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATAAT
AAAATGTTGTAAAAACACAAAAGCAAGAACTATGGAT-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>SNPs
--------------------------------S---S-------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------S-----S------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------SS-----------------------------
-----S----------------------------------------------------------------S---------
----S---------------------------------------------------------------------------
----------------------------------------------SS-----------------------S--------
----------S---------------------------S-----------------------------------------
-------------------------------S--------------------------------------------SSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S----------------------------SS------------S-----------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--S----------S------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----S-----------------------------------------------------------------------S
---------------------------------------------S--------------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------S------------------------------------------------------------
-------------------S---S------------S-------------------------------------------
-----S--------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S----SS---
-----------------------------------S-------------------------------S---S--------
--------------------------------------------------------------------------------
--S---------------------------------------S----------------S--------------------
---S--------S-S--S---S-----------------------S-S----------S-----------S--------S
--S-----SSSSSSSSSSSSS---------------------------------------S-------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------S-----------S---------
-------S----S---------------S----SSS-SSSSSS--------------S--S-S---S---SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_551
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AAACCGGTCAGGAACCTTCG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_2500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGGTGAAGAATCCGAGGGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_1569
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TCTCGTATCCCCCGCAAAAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_3284
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GAAGTGCCTCTGGACGCTAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
