>input_sequence_49821
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--------------------------------------------------------------------ATGGCCGCCACT
TCCCTGGCCGCTCTCATCGCCGGCGCCGCCACCGTGCAGCAAATACGGCAGCACCACGCCAAACTCCTCACTTCTGGCCG
CCTCCCCTCCCTCGGTCCTATCCTCCTCCGCCGCCTCATTTCCCTGCCCTCTCCCCACCTCCACCTCGCGCAGCGCCTCC
TCCTGTCCCTCCCCTCTCCGCCCCTCGCGCTCTTCAACCTCCTCCTTCCCCCACTCGCCTCCTCACCCGATCCCGCCGCA
GCGGCCCGCCTCTTCGTCCGCCTCCGCCGCAGCGGCCTACGCCCTGACGCGCACACGCTCCCGCACGTTCTCAAGGCCCT
CGCGCGCCTCGCACCGGGATCCCTTCCCCTCGCCGCCTCCACCCACGCGGAGGCCGTCAAGGACGGCTTAGACTGCGCCG
TGGTCTACGTACGGAACGCCCTAATGGTCGCCTACTCGGCCTGTGACCAACCGGCGCGCGCCATGCAGGTGTTCGACGAA
ATGCCGCGACGGACCGTGGTGTCCTGGAACACGGCGCTCACTGCCTGCTTGGACAACGACTGCCACGACCGGTGCGTTGG
CCTGTTCACTGCGATGGTGGAAGCCGGGTTCGAGCCCGACCAGACCACGCTCGTGTGCATGATGTCCGCCGCCGCTGAGC
TTGGCAACTTGCCGCTCTGCAAGTGGGCGCATGGGCAGGTCGTCGCCCGGCGGCTGGACATGACGCTTCAGCTTGGCACG
GCGGCAGTGAACATGTATGCGAAGTGTGGCTTGGTGAGTTATGCCTGGCGCTTGTTTGAGAGGATGCCGGCGCGGAATGT
CTGGACCTGGAGCGCAATGATCCAGGGGTTTGCACAGAATGGATTAGCCCGGGAAGCGCTCAGGCTGTTCGAAAGGATGA
AGGGTGCATCAGTTGCGCCCAATTATGTCACATTCCTCGGGCTGCTCTGCGCATGTAGCCATGCTGGGCTGGTCGACGAG
GGACGTCAGTTTTTCCATGAAATGCGGCATGTATACAAGATCGAGCCAATGATGAGACACTACAGCGCCATGGTCGATGT
CCTAGGGCGTAACGGTCGCCTCCAGGAAGCCTATGACTTTGTAATGGATATGCCTCTCGAGGCTGACCCAGTTGTATGGA
GGACATTGTTGGGCGCCTGCCAGATGCACAGCTCCAAGGACTGCATTCACATTGTCAGCAAGGTGCAGGAGAGATTGCTT
GAGCTGGAGCCCAGGAGAAGCGGAAACTATGTGATGGTCGCGAACATCTACTCCGACATTGGATCCTGGGACGAGGCAGC
GAAGGCGAGGAGGGTGATGAGGGAAGGCGGGATGAAGAAGATGGCAGGTGAGAGCTGCATCGAGGTCGGGGGGCTGGTGC
ATCGCTTCATCTCTGGGGATAATTCTTGCCCAGAATATGATCGGGCTTGTAGCATTGTCCATGAATTGAATCTCAACATG
AGAAAATGTGAACTTATTGACCGGATTTTGCTTATTGATGCTGAATGA--------------------------------
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>chr5B_1_TraesCS5B01G227300
AATCATGAAAAACTA-ATGCTGCTGCTATACTAATTAAGCTCTCTGTTGAATAAATCCAACATACGCACCCTGCAATTCC
TATACTGCTGCTATACTTGTCTCTGTACTAGCCGATGCTGCTCTCTGTTGCTGCTGCTCCGCTGCCTGCTAGCCACTTCT
TGCCAGGCT----CTGCTGCTGCTGCTG------CTCTGTGGTTGCTGCTCTACTCCTCCACGGCCGCC---GCTGCCGC
CGCAAGCAGCCAGGGAATTGATCCGCCGCAGGG-CGCTGCTGCTAAGGAGCGCCACCAGAAATCCATCTGTCGCGAGCCA
GGGAATCGATCCGCCACAGGGAGACGAGGGATGAGCCTGGGATGGCCAGATCAGGGACCGGAGGTGGAGCAGCGCTGCAG
GTCGAGAGAGGAGGAGTTGGCCGGCGATGAGGGAAGGAGTCGGGGTGGG-CGG-TGCGGCGCAGATCGAGGGAGTGACAG
ACGAGCGGGAGGCGGCGCACCAGGTAGGAGAGGCGATAGGACCGGG-AGTGCGAGGAGAGAGCCGGTTCCGCGTGGTCCG
CTCGTTTTGCAGGTCTCACCCGGTTCCGCAAATGGGGCGAATATTCGGCCCATGGGAACGAGGTGGTGATCGTTTCATTT
GTCAACTGAACACGAGAACAGGGTAAGGAAAAAAGACAGCCCTAGGATAAACTAAGAACACGGATGAGAGCATGAAAAGG
AAGCAGGCAAGCCGGATCCTTTAAACGCGTGATATTCCAGTCTGTTCCAGCAACTAAACACACCGTAAAGGCAAGTGTTC
CCGATAAACCAAATTGGGCAATCGCACAATTTTGAAGCCACGATAGACAAAAATGTGCATTTTAATCTCTACTTTTTAGC
AAAAAAATGTGCATTTTAATCTAGTTTATGGACCGACCACTGGGGCATTTCACTCGAGCG----------CAGCCCAACA
AAACCAGCCGCGGTCTACCTGCGCAAACGGTGTGACGGCGTCGAGCACGAGCACGAGCACTCCATGGCATGGCCGCCACT
TCCCTGGCCGCTCTCATCGCCGGCGCCGCCACCGTGCAGCAAATACGGCAGCACCACGCCAAACTCCTCACTTCTGGCCG
CCTCCCCTCCCTCGGTCCTATCCTCCTCCGCCGCCTCATTTCCCTGCCCTCTCCCCACCTCCACCTCGCGCAGCGCCTCC
TCCTGTCCCTCCCCTCTCCGCCCCTCGCGCTCTTCAACCTCCTCCTTCCCCCACTCGCCTCCTCACCCGATCCCGCCGCA
GCGGCCCGCCTCTTCGTCCGCCTCCGCCGCAGCGGCCTACGCCCTGACGCGCACACGCTCCCGCACGTTCTCAAGGCCCT
CGCGCGCCTCGCACCGGGATCCCTTCCCCTCGCCGCCTCCACCCACGCGGAGGCCGTCAAGGACGGCTTAGACTGCGCCG
TGGTCTACGTACGGAACGCCCTAATGGTCGCCTACTCGGCCTGTGACCAACCGGCGCGCGCCATGCAGGTGTTCGACGAA
ATGCCGCGACGGACCGTGGTGTCCTGGAACACGGCGCTCACTGCCTGCTTGGACAACGACTGCCACGACCGGTGCGTTGG
CCTGTTCACTGCGATGGTGGAAGCCGGGTTCGAGCCCGACCAGACCACGCTCGTGTGCATGATGTCCGCCGCCGCTGAGC
TTGGCAACTTGCCGCTCTGCAAGTGGGCGCATGGGCAGGTCGTCGCCCGGCGGCTGGACATGACGCTTCAGCTTGGCACG
GCGGCAGTGAACATGTATGCGAAGTGTGGCTTGGTGAGTTATGCCTGGCGCTTGTTTGAGAGGATGCCGGCGCGGAATGT
CTGGACCTGGAGCGCAATGATCCAGGGGTTTGCACAGAATGGATTAGCCCGGGAAGCGCTCAGGCTGTTCGAAAGGATGA
AGGGTGCATCAGTTGCGCCCAATTATGTCACATTCCTCGGGCTGCTCTGCGCATGTAGCCATGCTGGGCTGGTCGACGAG
GGACGTCAGTTTTTCCATGAAATGCGGCATGTATACAAGATCGAGCCAATGATGAGACACTACAGCGCCATGGTCGATGT
CCTAGGGCGTAACGGTCGCCTCCAGGAAGCCTATGACTTTGTAATGGATATGCCTCTCGAGGCTGACCCAGTTGTATGGA
GGACATTGTTGGGCGCCTGCCAGATGCACAGCTCCAAGGACTGCATTCACATTGTCAGCAAGGTGCAGGAGAGATTGCTT
GAGCTGGAGCCCAGGAGAAGCGGAAACTATGTGATGGTCGCGAACATCTACTCCGACATTGGATCCTGGGACGAGGCAGC
GAAGGCGAGGAGGGTGATGAGGGAAGGCGGGATGAAGAAGATGGCAGGTGAGAGCTGCATCGAGGTCGGGGGGCTGGTGC
ATCGCTTCATCTCTGGGGATAATTCTTGCCCAGAATATGATCGGGCTTGTAGCATTGTCCATGAATTGAATCTCAACATG
AGAAAATGTGAACTTATTGACCGGATTTTGCTTATTGATGCTGAATGATTACATAATTTGCATTCTTTAATCTTTACCTG
ATGATACGTTTGCA------------------TCTAGCCATTGACGAAATGAAAATGCTTTGCGTCCGATATTTTTAGTA
GAACCTCTGTATGATACTAGAACCATGCC--------TAAGATACTGGTGTGGCCATTCCATCGAAGGGTCATGGAATAG
TGTCGTACGAATATTCATCATACGTATAGCAATGCTCCTGATGCAGCTTTACTGATAACTGAACAACCAAATTTTATTAA
ATTTTCTGGAATTTCTCATCAAAACAGGAATTTGGTGTTTGCTTATTTTAATAGACATCATCATCTTGTTTATGACAGTA
ACACATGGGTAAGTACCCAAATTTCTTATTTCGAAACTTAAATGGGCATTGTTAGTCAAGGTCCATCCCACGTCAACAAT
CTTTTTTTAGTGGAT--------------------CCACATCAACAATCTGATCACGAACAATGGCCAAAGTTAGTGGTA
GATTATCTATTTATCTGGATCTCCTTGGCAGCGGTACTGTTTGTGA-AAAAGAAACTATGTGGGATTTATTTTGGACCAT
CTTCAACGACTGTCACTCTTGCAAATCAATTGCCGTGTTTG--AAAAATCAGGTAGGAACTCATTGAAGAAAG-ACATGG
ACAGCTTGAGATAGAAAACTGAAGGAATAAGAAAAATGTAGGTTTACAG---CATGCCCACCTGAATTCGACATGATTGA
TTGTAGCGAAATTTGTTTGTCTGTATCGTAGGAAAAAAAGAGTTGTTCGACGATGTCTGATCCAGGTGGGGGTAATATTT
TAAAATATAGTGTGAAGAATCTTCAAGTGAAATTTGTACACGATTGAATTCTACTCCCTCCGTTCTTAAATATAAGTCTC
TTTAGAAATTTAATATGGACTATATACGGAGCAAAGTAAATCTACACTCTAAACCACGTCTATATACATCCGAACGTAGT
CCATATTAAAATCTCTACAAAGATTTATATTTAGGAATGAAGGAAGTACAAAACAAACAAT
>chr5B_1
AATCATGAAAAACTA-ATGCTGCTGCTATACTAATTAAGCTCTCTGTTGAATCAATCCAACATACACACCCTGCAATTCT
CATACTGCTGCTATACTTGTCTCTGTACTAGCCGATGCTGCTCTCTGTTGCTGCTGCTCCGCTGCCAGGCTCAG------
----------CTGCTG------CTGCTG------CTCCGTGGTTGCGGCTCTACTCCTCCACGGCCGCC---GCCGCCGC
CGCAAGCAGCGAGGGAATTGATCCGCCGCAGGG-CGCTGCTGCTAAGGAGCGCCACCAGAAATCCATCTGCCGCGAGCCA
GGGAATCGGCCCGCCACAGGGAGACGAGGGATGAGCCTGGGATGGCCAGATCAGGGACCGGAGGTGGAGCAGCGCTGCAG
ATCGAGAGAGGAG---TTGGCCGGCGGTGAGGGAATGAATCGGGGTGGG-CGG-TGCGGCGCAGATCGAGGGAGTGAGAG
ACGAGCGGGAGGCGGCGCAGCAGGTAGGAGAGGCGATAGGACCGGGGAGTGCAAGGAGAGAGCCGGTTCCGCGTGGTCCG
CTCGTTTTGGAGGTCTCACCCGGTTCCGCATATGGGGCGAATATTCGGCCCGTGGGAACGAGGTGGTGATCGTTCCATCT
GTCAACTGAACACAAGAACCGGG---------------------------------------------------------
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>chr4D_1
AATCATGAAAAACTAGATGCCGCTACTATACTAATTAAGCTCTCTGTTGAATCAATCCAACATACGCACCCTGCGATTCC
TATACTGCTGCTATACTTGTCTCTGTACTAGCCGATGCTGCTCTCTGTTGCTGCTGCCCCGTTGCCTGCTAGCCACTTCT
TGCCAGGCT----CTATTGATGCTGCTG------CTCAGTGGTTGCTGCTCTACTCCTCCACGGCCGCC---GCCGCCGC
---AAGCAGCCAGGGAATTGATCCGCCGC-AGGCCGCTGCTACTAAGGAGCGCCACCAGAAATCCATCTGCCGCGAGCCA
GGGAATCGATCTGCCACAGGGAGACAAGGGATGAGCCTGGGATGGCCAGATCAGGGACCGGAGGTGGAGCAGCACTGCAG
ATCGAGAGAGGAGGAGTTGGCCGGCGGTGAGGGAAGGAATCGGGGTGGGT-GG-TGCGGCGCAGATCGAGGGAGTGAGAG
ACGAGCGGGAGGCGGCGCACCTGGTAGGAGAGGCGATAGGACTGGG-AGTGCGAGGAGAGAGCCGGTTCCGCGTGGTCCG
CTCGTTTTGGAGGTCTCACCCGGTTCCACATATGGGGCGAATATTCGGCCCGTGGGAACGAGGTGGTGATCGTTCCATCT
GTCAACTGAACACGAGAACCAGG---------------------------------------------------------
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>chr4B_1
AATCATGAAAAACTA-ATGTTGCTGCTATACTAATTAAGCTCTCTGTTGAATCAATACAACATACGCACCCTGCAATTCC
TATACTTCTGCTATACTTGTCTCTGTACTAGCCGATGATGCTCTCTGTTGGCGCTGCTCGGCTGCCTGCTAGCCACTTCT
TGCCAGGCT----CTG------TTGCTG------CTCCGTGGTTGCTGCTCTACTCCTCCACGGCCGCC---GCCACCGC
---AAGCAGCCAGGGAATTGCTCCGCCGC-AGG-CGCTGCTGCTAAGGAGCGCCACCAGAAATCCATCTGCCGCGAGCCA
GGGAATCGATCCGCCACAGGGAGACGAGGGATGAGCCTGGGATGGCCAGATCAGGGACCAGAGGTGGAGCAGCGCTGCAG
ATCGAGAGAGGAGGAGTTGGCCGGCGGTGCGGGAAGGAATCGGGGCGGG-CGG-TGCGGTGCAGAT-GAGGGAGTGAGAG
ACGAGCGGGAGGCGGCGCACCAGGTAGGAGAGGCGATAGGACCAGG-AGTGCGAACAGAGAGCCGGTTCCGCGTGGTCCG
CTCGTTTTGGAGGTCTCACCCGGTTCCGCATATGGGGCGAATATTCGGCCCGTGGGAACATGGTGGTGATCGTTCCATCT
GTCAACTGAACACGAGAACCGGG---------------------------------------------------------
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>chr3A_1
AATCATGAAAAACTAGATGATGCTGCTATACTAATTAACCTCTGTATTGAATCAATCCAACATGCGCACCAAGCAATTCC
TATACTGCTACTATACTCGTATCTGTACTAGCCGATGATGCTCTCCGTTGCTTCTGCTCCGCTGCCTGCTAGCCACTTCT
TGCCCAGGCTCTGCTG------CTGCTG------CTCCGTGGTTGCTGCTCTACTCCTCCACAGCCCCC---GTCAGCGC
---AAGCAGCCAGGGAATCGATCCGCCGCAAGC-CGCTGCTGCTGAGGAGCGCCACCAAAAATCCATCTGTCGCGAGCCA
GGGAATCGATCCGCCACAGGGAGACGAGGGATGTGCATGGGAAGGCCAGATCAGGGACCAGGGGTGAAGCAGCGCTGCAG
ATCGAGAGAGGAGGAGTTGGCCGACGGTGAGGGAAGGAATCGGGGCGGGTCGA-TGCGGCGTAGATCGAGGGAGTGAGAG
ACGAGGGGGAGGCGGCGCACTAGGGAGGGGAGGTGATAGGACTGGG-AGTGCGAGGAGAGAGCCAGTTCCGCGTCGTCCG
CTTGTTTTGGAGGTCTCACCCGATTCCGCATCTGGGGCGAATATTCGGCCCGTGGGAACGAGGTGGTGATCATTCCATCT
GTCAACTGAACACGAGAA--------------------------------------------------------------
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>chr3B_1
AATCATGAAAAACTAGATGTTGCTGCTATACTAATTAACCTCTCTACTGAATCAATCCAACACACGCACCAAGCAATTCC
TATACTCCTGCTATACTCATATCTGTACTAGCCGATGCTGCTCTCTGTTGCTTCTGCTCCGTTGCCTGCTAGCCACTTCT
TGCCCAGGCTCTGCTG------CTGCTGTTCCTGCTTCGTGGTTGCTGCTCTACTCCTCCACAGCCGCC---GCCGCCGC
---AAGCAGCCAGGGAATCGATCCGCCGCAAGT-CACTGCTGCTGAGGAGCACCACCAAAAATCCATCTATTGCAAGCCA
AGAAATCGATCCGCCACAGGGAGACGAGGGATGCGCCTGCGAAGGCCCGACCAGGGACCAGGGGTGAAGCAGCGCTGCAG
ATCGAGAGAGGAGGAGTTGGCCGGCGGTGAGGGAAGGAATCGGGGGGGGTCGA-TGCGGCGCAGATCAAGGGAGTGAGAG
ACGA-GGGGAGGCGGCGCACTAGGGAGGGGAGGCGATAGGACTGGG-AGTGCAAGGAGAGAGCCGGTTCCGCGTCATCCG
CTTGTTTTGGAGGTCTCACCAGGTTCCGCATCTGGGGCAAATATTCAGCCCACGGGAATGAGGTGGTGATCATTCCATCT
GTCAACTGAACATGAGAACCAGG---------------------------------------------------------
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>chr3B_1
AATCATGAAAAACTAGATGCTGCTGCTATACTAATTAACCTGTCTATTGAATCAATCCAACATACGCACCAAGCAATTCC
TATACTGCTGCTATACTCGTATCTATACTAGCCGATGCTGCTCTCTGTTGCTTCTGCTTCGCTGCCTACTAGCCACTTCT
TGCCCAAGCTCTGCTG------CTGCTGCTCCTGCTCCGTGGTTGCTGCTCTACTCCTCCACAGCCGCC------GCCGC
---AAGCATCAAGGGAATCAATCTGCCGCAAGC-CGCTGCTGCTGAGGAGCGCCACCAAAAATCCATCTGTCGCGAGCCA
GGGAATCGATCCGCCACAGGGAGACGAGGGATGCGCCTGGGAAGGCCAGATCAGGGACCAGGGGTGAAGCAGCGCTGCAG
ATCGAGAGAGCAGGAGTTGGCTGGCGGTGAGGTAAGGAATCGGGGTGGGTCGG-TGC-GCGCAGATCAAGGGAGTGAGAG
ACGAGGGGGAGGCGGCGCACTAGGGAGGGGAGGCGATAGGACTGGA-AG-------------------------------
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>chr5A_49
-------------------------------------------------AATTAATCCAACATGCGCACCAAGCAATTCC
TATACTGCTGCTATACTTGTCTTTGTACTAGGCGATGGCGCTCTTTGTTGCTGCTGCTCCGTTGCCTGCTAGCTACTTCT
TGCCCAGGCTCTG--------------------------------CTACTCTACTCCTCCACGGCTGCCCCTGCCGCCGA
---AGGCAGCCAGGGAATCAATCCGCCGCAAGC-CGCTGCTGCTGAGGAGCGCCACCAGAAATCCATCTGCCGCAAGCTA
GGGAATCAATCAGCAACAGGGAGACAAGGGATGAGCCTGGGATGGCCAGATCAGGGACCAGAGGTGGAGCAGGGCTGCAG
ATCGAGAGAGGCGGAGTTGGCCGACGGTGAGGGAAGGAATCGGGGCGGGGCGGTTGCGGCGCAGATCGAGGGAGTGAGAG
ACGAGGGGGAGGCGACGCACCATGGAGGAGAGGTGATAGGACTAGG-AGTGCGAGGGGAGAGCCAGTTCCGCGTCGTCCG
CTCGTTTTGGAGGTCTCACTCGGTTCCGCATCTAGGGCGAATATTCGGCCCATGGGAACGAGGTGGTGATAC-TCCATCT
GCCAACTGAACACGAGAACCAGG---------------------------------------------------------
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>chr3D_53
-----------------------------------------------------AATCCAACATATGCACCAAGCAATTCC
TATACTACTGCTATACTCATCTCTGTACTAGCCGATGCTGCTCTTTGTTGCTGCTGCTCCGCTGCCCGCTAGCCACTTCT
TGCCCAGGCTCTG--------------------------------CTACTCTACTCCTCCACGT---CCGCTGCCGCCGA
---AGGCAGCCAGGGAATCGATCCGCCGCAAGC-CGCTGCTGCTGAGGAGCGCCACCAGAAATCCATCTTCCACAAGCCA
GGGAATCAATCCGCAATAGGGAGACGAGGCATGAGCCT-CGTATGCCAGATCAGGGACCGGAGGTGGAGCAGCGCTGCAG
ATCGAGAGAGGAGGAGTTGGCCGGTGGTGAGGGAGGGAATCGGGGCGGGGCGGTTGCGGCGCAGATCGAGGGAGTGAGAG
ATGAGGGGGAGGCGGCGCACCAGGGAGGAGAGGCGATAGGACTAGT-AGTGTGAGGAGAGAGCCCGTTCCGCACCGTCTG
CTCGTTTTGGAGGTCTCACCCGGTTCCGCATCTGGGGAGAATATTCGGCCCGTGGGAATAAGGTGGTCATAC-TCTATCT
GTCAACTGAACACGAGAACCAGG---------------------------------------------------------
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>chr5A_885
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----------------------AGTTTATGGACCGACCACTGGGGCATTTCA-----GCCCAGCCCAGCCCAGCCCAACA
AAACCAGCCGCGGTCTACCTGCGCAAACGGCGTGACGGCGTCGAGCACGAGCACGAGCACTCCATGGCATG---GCCACT
TCCCTGGCCGCTCTCATCGCCGGCGCCGCCACCGTGAAGCAAATACGGCAGCTCCACGCCAACCTCCTCACTTCAGGCCG
CCTCCCCTCCCTCGGCCCTATCCTCCTCCGCCGCCTCATTTCCCTGCCCTCTCCCCACCTCCACCACGCGCAGCGCCTCC
TCCTGTCCCTCCCCTCTCCGCCCCTCGCGCTCTTCAACCTCCTCCTCCCCCCACTCGCCTCCTCGCCCGATCCCGCCGCA
GCGGCCCGCCTCTTCGTCCACCTCCGCCGCAGCGGCCTATGCCCTGACGCGCACACGCTCCCGCACGTTCTCAAGGCCCT
CGCGCGCCTCGCACCGGGATCCCTTCCCCTCGTCGCCTCCACACACGCGGAGGCCGTCAAGGACGGCTTGGACTGCGCCG
TCGTCTACGTACGAAACGCCCTAATGGCCGCCTACTCGGCCTGTGGCCAACCGGCGCGCGCCATGCAGGTGTTCGACGAA
ATGCCGCGCCGGACCGTGGTGTCCTGGAACACGGCGCTCACTGCCTGCGTGGACAACGACTGCCACGACCAGTGCGTTGG
CCTGTTCTCTGCGATGGTAGAAGCCGGGTTCGAGCCTGACCAGACCACGCTCGTGTGCATGATGTCCGCCGCCGCTGAGC
TTGGCAACTTGCCGCTCTGCAAGTGGGCGCATGGGCAGGTCGTCGCCCGGCGGCTGGACATGACGCTTCAGCTTGGCACG
GCGGCAGTGAACATGTATGCCAAGTGTGGCTTGGTAAGTTATGCCTGGCGCTTGTTTGAGAGGATGCCGGCGTGGAACGT
CTGGACCTGGAGCGCAATGATCCAGGGGTTTGCACAGAATGGATTAGCCCGGGAAGCGCTCAAGCTGTTCGAAAGGATGA
AGGGTGCATCTGTTGCGCCCAATTATGTCACATTTCTCGGGCTGCTCTGCACGTGTAGCCATGCTGGGCTGGTCGACGAG
GGACGTCAGTTTTTCCATGAAATGCGGCATGTATACAGGATCGAGCCAATGATGAAACACTACAGCGCCATGGTCGATGT
CCTAGGGCGTAACGGTCGCCTCCAGGAAGCTTATGATTTTGTTATGGACATGCCTCTCGAGGCTGACCCAGTTGTATGGA
GGACATTGTTGGGCGCCTGCCAGATGCACAGCTCCAAGGACTGCATTGACATTGTCAGCAAGGTGCAGGAGAGATTGCTC
GAGCTGGAGCCCAAGAGAAGCGGGAACTATGTGATGGTTGCAAACATCTACTGCGATGTTGGATCGTGGGACGAGGCGGC
AAAGGCGAGGAGGGTGATGAGGGAAGGGGGGATGAAGAAGATGGCAGGTGAGAGCTGCATCGAGGTTGGGGGGCTGGTGC
ATCGCTTTATCGCTGGGGATGATTCTTGCCCAGAATATGATCGGGCTTGTAGCCTTGTCCATGAATTGAATCTCAACATG
AGAAAATGTGAACTTATTGATGGGAATTCGCTTATTTATGCTGAATGATTACATAGTTTGCAT-------TCTTTACCTG
ATGATACGTTTGTATATGTTGATTGTGCCACGTCTAACCATTGATGAAATGAAATTGCTTTGCGTCCAACATCTTCAGTA
GAATCTCAGTATGATAATACAATCATGTGTACTTGTGTAGGATATTGGTCTGGTCATTCCATCGGAGGGTGATGGAATAG
TGTAGTACGAAAATTCCTCGTATGCATAGTAATGCTCTGGATGCAACTATGCTGATAACTGAACAACCAAGTTTTATTAA
ATTTTCTGGAATTTTCCCTCAAAACAGAAACT------------------------------------------------
-------------TACCCAAGTTTCTTATTTCTAAACTTAAATGGACACTGTTAAGTCAAGGTAGCCAACGAACGTGCAG
AAATTGTTTATCTTAATTATCGGAGACTCCACATCCCACATCAACAATCTGATCACCAACAATGGCCAGAGTTG--GGTA
GATTATCTATTTATCTGGATCTCCTTGGCAGCGGTACTGTTTGTGAGAAAAGAAACTATGTGGGATTTATTTTGAACCAT
CTTCAACGAATGTCAGTCTTGCAAAATGATTGCCGGGTAAAGAAAAAATCAGATAAGAACTCACTGAAGAAAACACATGG
ACAGCTTGAGATAAAAAACTGAAGGAATAAGAGAAATGTAGGTTTACAGTATCATGTCCACTTGAATTTGACATGATTGA
TTGATCTGAAATTTGTTTGACTGTATCGTAGGGAAAAAAAGAATTTTT--------------------------------
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>chr5D_885
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----------------------AGTTTATGGACCGACCACTGGGGCATTTCACTCCAGCCCAGCCCAGCCCAGCCCAACA
AAACCAGCCGCGGTCTACCTGCGCAAACGGCGTGACGGCGC------CGAGCACGAGCACTCCATGGCATG---GCCACT
TCCCTGTTCGCTCTCATCGCCGCCGCCGCCACCGTGCAGCAAATACGGCAGCTCCACGCCAACCTCCTCACTTCAGGCCG
CCTCCCCTCCCTCGGTCCTATCCTCCTCCGCCGCCTCATTTCCCTGCCCTCTCCCCACCTCCACCTCGCGCAGCGCCTCC
TCCTGTCCCTCCCCTCTCCGCCCCTCGCGCTCTTCAACCTCCTCCTTCCCCCACTCGCCTCCTCGCCCGATCCCGCCGCA
GCGACCCGCCTCTTCGTCCACCTCCGCCGCAGCGGCCTACGCCCTGACGCGCACACGCTCCCGCACGTTCTCAAGGCCCT
CGCGCGCCTCGCGCCGGGATCCCTTCCACTCGCCGCCTCCACCCACGCGGAGGCCGTCAAGGACGGCTTAGACTGCGCCG
TGGTGTACGTACGGAACGCCCTAATGGCCGCCTACTCGGCCTGTGGCCAGCCGGCGCGCGCCATGCAGGTGTTCGACGAA
ATGCCGCGCCGGACCGTGGTGTCCTGGAACACGGCGCTCACTTCCTGCGTGGACAACGACTGCCACGACCGGTGCGTTGG
CCTGTTCTCTGCGATGGTAGAAGCCGGCTTCGAGCCCGACCAGACCACGCTCGTGTGCATGATGTCCGCCGCCGCTGAGC
TTGACAACTTGCCGCTCTGCAAGTGGGCGCATGGGCAGGTCGTCGCCCGGCGGCTGGACATGACGCTTCAGCTTGGCACG
GCGGCAGTGAACATGTATGCGAAGTGTGGCTTGATAAGTTATGCCTGGCGCTTGTTTGAGAGGATGCCTGCGCGGAATGT
CTGGACCTGGAGCGCAATGATCCAGGGGTTTGCACAGAATGGATTAGCCGGGGAAGCGCTCAAGCTGTTCGAAAGGATGA
GGGGTGCTTCAGTTGCGCCCAATTATGTCACATTTCTCGGGCTGCTCTGCGCATGTAGCCATGCTGGGCTGGTCGACGAG
GGACGTCAGTTTTTCCATGAAATGCGGCATGTATACAAGATCGAGCCAATGATGAAACACTACAGCGCCATGGTTGATGT
CCTAGGGCGTAACGGACGCCTCCAGGAAGCTTATGACTTTGTTATGGACATGCCTCTCGAGGCTGACCCAGTTGTATGGA
GGACATTGTTGGGCGCCTGCCAGATGCACAGCTCCAAGGACTGCATTGACATTGTCAGCAAGGTGCAGGAGAGATTGCTT
GAGTTGGAGCCCAAGAGAAGCGGGAACTATGTGATGGTCGCAAACATCTACTGCGATGTTGGATCGTGGGACGAGGCGGC
GAAGGCGAGGAGGGTGATGAGGGAAGGGGGGATGAAGAAGATGGCAGGTGAGAGCTGCATCGAGGTTGGGGGGCTGGTGC
ATCGCTTTATCGCTGGGGATGATTCTTGCCCAGAATATGATCGGGCTTGTAGCCTTGTCCATGAATTGAATCTCAACATG
AGAAAATTTGAACTTATTGACGGGAATTCGCTTATTGATGCTGAATGATTACATAGTTTGCAT-------TCTTTACCTG
ATGATACGTTTCCATCTGTTGATTGTGCCGTGTCTAACCATTGATGAAATGAAATTGCTTTGCGTCCAACATTTTCAGTA
GAATCTCAGTATAATAATACAATCATGTGTACTCGTGTAGGATATTGGTCTGGTCATTCCATCGGAGGGTGATGGAATAG
TGTAGTACGAAAATTCCTCGAATGCACAGTAAT-CTCTTGATGCAATTATGCTGATAACTGAACAACCAAGTTTTATTTA
ATTTTCTGGAATTTCCCCTCAAAACAGAAACT------------------------------------------------
-------------TACCCAAATTTCTTATTTCTAAACTTAAATGGACACTGTTAAGTCAAGGTAGCCAATGAACGTGCAT
AAATTGTGTATCTTAATTATCGGAGACTCCACATCCCACATCAACAATCTGATCACCAACAATGGCCAGAGTTG--GGGA
GATTATCTGTTTATCTGGATCTCCTTGGCAGCAGTACTGTTTGTGAGAAAAGAAACTATGTGGGATTTATTTTTAACCAT
CTTCAACGGATGTCACTCTTGCAAAATGATTGCCGGGTAAAGAAAAAATCAGATAAGAACTCATTGAAGAAAACACATGG
ACAGCTTGAGGTAAAAAACTGAAGGAATAAGAAAAATGTAGGTTTACAATATCATGTTCACTTGAATTTGACATGATCGA
TTGATCTGAAATTTGTTTGGCTGTATCGTCGGGGAAAAAATTTGTTC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>SNPs
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
----------------S--S-----------------S------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------S-----------S--------------------------------------S--
--------------------------------------------------------------------------------
---------S--------------------S-------------------------------------------S---S-
-------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------------------S---S--------------------
------------------------------S----------------------------------------SSS------
----------------------------------------------------S---------S-----------S-----
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------S----------------------------------
--------S---------------------------------------S-------------------------------
-------S----------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------S-----------------
----------------------------------S---------------------------------------------
-------------------------------------------------------S------------------------
------------------------------S-----------S-----S-------------------------------
-----------------------------------------------S--------------------------------
-------------S---------S-----------------S----------S---SS-------S-----------S--
---------------------------S--------------------------------------S-------------
-------S---S--------S--------------------------------S--------------------------
---------------------S---S--S--------------------------S-------SSSSSSS----------
------------------------------------S-------S---------S------------S-S-----S----
---S---S--------S--S--S----SS----------S----S----S---S----------S-----S---------
---S-------S----S--S--S-S----S-------S-------S--S-S-------------------S---------
---------------S-S---------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------------S------------S--S-----SSSS-S-SSSSS-SSSSSS-SSSS--
SSS--S--SS-SSSS-----------------------------------------S-----------S----SSS----
--------------------------------------------------------------------------S-----
---------S---------------SSS-------S--SSS-----------S--S----------------S-------
-------------S------------------------------------------S----S------S-----------
---SSSS------------S------------S------SSS--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_827
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACCAAATTGGGCAATCGCAC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CATTGGATCCTGGGACGAGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_1115
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ACGCCAAACTCCTCACTTCT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CAAGGTCCATCCCACGTCAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
