>input_sequence_49816
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-----------------------------------------------------------------------------ATG
CAGCCGACGGAGTCCGCCCAACGCCGGGCCTCGT---------CCACGGCGCCCCGGCGGAGCATCGGGTGCATGGCCG-
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-------------------------------------------GCCTCCTCCGCCTGCTCTCCCCGTACCATCGCCACCG
GAAGCGCCTCACCGCCAAGAACGCCACGCCAGAGGCCTCCCTACCGCCGCCGTCTCCACCGCCCATGAAGAAGCCGGCAG
CGTCGCCGTCACCGACGCAGGCCCCAGGGAAGCCGCAGACGCAGACAGCTGTCCGGCGGCGGCGTTCATGCGAAGCGCCT
CGGAGCCCGACGATCGCTCCGGAGTACCGCCGGGCCAGCTGTGACAGCCCCAGGCCGCCGCCGCCAGCCATCGTCGCGCG
CCTAATGGGCCTGGAG----------------------------------------------------------------
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------------------------------------------------------GAGTCCGCGCCGGCTTCCCCCGCCAC
GACCCCGCGGCCACGACCGCTGCCAACC-------------------CGCCCTCCTCCTCCCCCGCCACCAGAGATGGCT
GCGGAGAAGCGACGCAAGCTGCTGGGTGCGCTGGAGAAATGCGACGACGACCTCCAGACACTGCGGCGGATCATCGCGGC
CGTCCGGGCTGCCGAGCTGCGGTCGGCCGCTGCGTCCGACGTCTCGCCGGCTCCGGCAGGGGAAGGCAAGGGCGCCAAGT
GGATGGACGGCTCGCCGGCGCTGCAGCAGAAGCCGCGGGCCGAGGCGCAGTATCCCAGCCCGGACTC-GGTGCTGGACGC
CATCACCTCACCGAGATTTCCATGCAGGAAGCGGCCGTCTCCATGCACACATATCGATGCAGACAGCAAGCCCGAGATTA
CCCGTTGCAGTAACGACGCACTCATAGTACGATCCAAGATCGTGAAGCCCTCCCGAACACTTGTTTTCTCCGGTACGTGG
TGGCATCTCTGATTCTCTGTCGTTCAAATACACAGTTCTCCATATAACTCACGTATACGTGCACGCATTTTATA---GTA
CTCTGATGATCTGCACCGTGTTAGTTTCTCCAGATTAATTAAGCTTAAGTTTAGGGGTTTACGTGCCACATCAAATTTGC
CAGTTGTCACTATCTTC----TGTCGTGAAAAATATGCAGCAGGCTTCACGGTAACACGTGTGGTTTCTCGTCTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACGAGCTGCACGCCATGGCCATCTACCACCACCCGGCGACGGTGG
CGGCCGTCGAGGGAATACCGCGGTGGACGCCGTCAGTAGCCGAGGCGCAGGGCTGGCAGCATCGGCGACGGTGGGGGCTG
CAGGGCCCAGAGCGGAGCCGCGCGATGGTGGAGAGCGTGGGGGAGGTGTGGGGGCAGGGCGCCGGCGAGGAGCGGTGGGA
GGCCGGCCTCGTCGGCGCCGCGCTGGAGCGCGCCATCCTGCAGGAACTGGTCTTGGACGTCGTGACGGAGCTGCTCGCGT
ACTCCGGGCGGGAAGCGCAGGCACCGTTCGGCCAGTTTGGCCGCGGGCACGACCA---CGGCGGCGGTGCCATGTGCCGG
AAGAGGCTCTGTTTCTGA--------------------------------------------------------------
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>chr4D_1_TraesCS4D01G179900
GTAAACCAACATAAGATTGAAGTCGTTTACAGCGCACGCATGTCCCAGAGGAGAGTGGATATAGTAAACTTGA---TATT
TCTTACGCTTCCAAAGCCATTGTTTTTTTGTAGCAGCAACTAGCAGAATGGAAGAGGAAATTGCTGTACACGCACGCGTC
CTGTGGAAGCTTTAGGTGTTGATCCACAGAGGCCGGCCGGGCACTGGGTCGTATCTTGAGACTTTAGTATATTTACAGGC
CGGAGGTGTAAACTTGAAGCTAAAGCAACGGGG----AAAAAACAATTGTAGAGATGCATGTCTCATCATGATGCTGGAA
AACTCGATACTCTCCCTTTTTACCATGTGATGCATCTGCCCAGCAGAGCAGAGCACCACTCGCCGGCCCCAAAATTCACC
GACCAAACGGGAGAGATTTTTTCTACAGGGACTAGAAAAAGACTCTACTAGAGAATCTTTTTTGATTAGTCCCTGTGACT
AGAAAAAGTCCTAGGACTTCTGAATCAAACACCCTCTATCATTGCCAAGTTCCTGTTCCACCTCGAGATGCATGCATGAT
CATTCAGACTATTACTCGTTAATCCCCACTCCA---------------------CCCGGCTTTGGCTAGTTCTACTCCGC
TCTGTGACACACCGTACTTGCCTGCCGTTCAAATTAATGTCAGGTTAATTACTCACTGCTTGCGGCAGCGCAGCAGCTGC
ATGCTGCCGCCTGCTCCCGAGCAAGGTGGCTC--------AGCTAGCTAGGCTAGGCTTCCACTGCTGCAGAGTGCAGTT
TAGCTCGTGTACGTCCTTC-AGCTTTTGTCCCGTCTCTTCTAACAAAGCGCAAGCTGAGGAGTTACCTAAATTACCCTCG
GTATTATTAGGGCCGATGCTGTGGACACCGGGGGTGACGCTGTCATTGCGCGCGTCCTCTTCGCCAATTATAATGCCCCC
CACGCTAACACAGCACGCGGGTCTAGTTCAGCTACCTCTCTCAACTTGGACATTCACGAGTCAAGACTCAAGACGCGATG
CAGCCGACGGAGTCCGCCCAACGCCGGGCCTCGT---------CCACGGCGCCCCGGCGGAGCATCGGGTGCATGGCCG-
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-------------------------------------------GCCTCCTCCGCCTGCTCTCCCCGTACCATCGCCACCG
GAAGCGCCTCACCGCCAAGAACGCCACGCCAGAGGCCTCCCTACCGCCGCCGTCTCCACCGCCCATGAAGAAGCCGGCAG
CGTCGCCGTCACCGACGCAGGCCCCAGGGAAGCCGCAGACGCAGACAGCTGTCCGGCGGCGGCGTTCATGCGAAGCGCCT
CGGAGCCCGACGATCGCTCCGGAGTACCGCCGGGCCAGCTGTGACAGCCCCAGGCCGCCGCCGCCAGCCATCGTCGCGCG
CCTAATGGGCCTGGAG----------------------------------------------------------------
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------------------------------------------------------GAGTCCGCGCCGGCTTCCCCCGCCAC
GACCCCGCGGCCACGACCGCTGCCAACC-------------------CGCCCTCCTCCTCCCCCGCCACCAGAGATGGCT
GCGGAGAAGCGACGCAAGCTGCTGGGTGCGCTGGAGAAATGCGACGACGACCTCCAGACACTGCGGCGGATCATCGCGGC
CGTCCGGGCTGCCGAGCTGCGGTCGGCCGCTGCGTCCGACGTCTCGCCGGCTCCGGCAGGGGAAGGCAAGGGCGCCAAGT
GGATGGACGGCTCGCCGGCGCTGCAGCAGAAGCCGCGGGCCGAGGCGCAGTATCCCAGCCCGGACTC-GGTGCTGGACGC
CATCACCTCACCGAGATTTCCATGCAGGAAGCGGCCGTCTCCATGCACACATATCGATGCAGACAGCAAGCCCGAGATTA
CCCGTTGCAGTAACGACGCACTCATAGTACGATCCAAGATCGTGAAGCCCTCCCGAACACTTGTTTTCTCCGGTACGTGG
TGGCATCTCTGATTCTCTGTCGTTCAAATACACAGTTCTCCATATAACTCACGTATACGTGCACGCATTTTATA---GTA
CTCTGATGATCTGCACCGTGTTAGTTTCTCCAGATTAATTAAGCTTAAGTTTAGGGGTTTACGTGCCACATCAAATTTGC
CAGTTGTCACTATCTTC----TGTCGTGAAAAATATGCAGCAGGCTTCACGGTAACACGTGTGGTTTCTCGTCTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACGAGCTGCACGCCATGGCCATCTACCACCACCCGGCGACGGTGG
CGGCCGTCGAGGGAATACCGCGGTGGACGCCGTCAGTAGCCGAGGCGCAGGGCTGGCAGCATCGGCGACGGTGGGGGCTG
CAGGGCCCAGAGCGGAGCCGCGCGATGGTGGAGAGCGTGGGGGAGGTGTGGGGGCAGGGCGCCGGCGAGGAGCGGTGGGA
GGCCGGCCTCGTCGGCGCCGCGCTGGAGCGCGCCATCCTGCAGGAACTGGTCTTGGACGTCGTGACGGAGCTGCTCGCGT
ACTCCGGGCGGGAAGCGCAGGCACCGTTCGGCCAGTTTGGCCGCGGGCACGACCA---CGGCGGCGGTGCCATGTGCCGG
AAGAGGCTCTGTTTCTGAGCGATTTCGGGTGCTCTGTTCCGGCTTCATGCGTACG------------TA-----------
--------------------------------------CGAGTGGAGCAAGCCACGCACGTACGGTACGTACTCCAAGGG
ATGGATGTCGGTGACTGACCCC---ATGATGTTGGTGGTGGTCGTATTGAAAGATCGGATACGCTGTGGCGCCGTTGTAG
GTGAGGGCAATAAAGTGACGCGTCGCTTTAGAATGTCGGAGGCGATGAAGTGAGCACAGTGAGACTGACTCT-------G
CTTTGCGATCATGAGGTCGGCTCCACGCGCAGCCTTGCGTTGCGCCCACAAGGACACCA-ACACAAGGCGTTGAGTTAAG
CTTGCATACGATATAGAGAAGGATGCGTTTCCAGTTCCATGGA-------------------------TCATCTAGTTGT
ATAGTGC---TAGTAGTACATTTTTTTCTTTCTGGATTTACGA--GTTTATGTGGACCGTTGTGACCATTTACGTCATTC
T---TGTTCTGG--ATACTGATTAATACCGGCTAATTATTTTTCTTAACCTTGAAACTTTTCCAAAATAGTATAG-----
-AGTAGTGCCTTCTTGCTCGCCTTGTATCCCGCCTAGGTCCATT-GGAAAAAAATTATCATTCGAAATGGGCGGGAGGTG
TTCGAACGAGGTCGAGGATTGATGGTTCATAGAACTTGAAAATCAGAAAAAGGTGACATTTTCTCTTTCAAAATGATGAA
CCTCTCCACCGCTAAAAGAAAATCATTGAAGAAACCGTCATAGGATCAACAACGAAGTGGCTAATCACTTTTTTCTCGCT
CTCTGGGATTATTCTCGTTGGCCGAAATTATGGGTAGGAAGCAGGAGCAGTGGAGCATGCTTGGGATCCAGTGA------
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------------------------------------------GAACGCAGGCAGGGCAGGGCGAGCCCAACAATGCTACA
TTCACGGACTAACACAGGGGCGGGCCCGCTATGTGTGCGTAGGCTTGCTGATTGAAAATCCTACAGCACGTAGTACTTGG
AGCGAAAATTCTAAACGCACCGACTAATACGGGGAGTTTACGGACTCCTTCGTTAACTAA
>chr4A_1
GTAAAACAACGTAAGGTTGAAGTCGTTTACAGCGCATGCATTTCCC--AGGAGAGTGGACATAGTAAACTTGATAGTATT
TCTTACGCTTCCAAAGCCATTGTTTTTT-GTAGCAGCAACTAGCAGAAA-GAAGAGGAAATTGCTGTACACGCACGCGTC
CTGTGGAAGCTTTAGGTGTTGATCCACAGAGGCCGGCCGGGCACTGGGTCGTATCTTGAGACTTTAGTATATTTACAGGC
CGGAGGTGTAAACTTGAAGCTAAAGCAACGAAAG-AAAAAACACAATTGCAGAGCTGCATGTCTCATCATGATGCTGGAA
AACTCGATACTCTCCCTTTTTACCATGTGATGCGTCTGCCCAGCAGAGCAGAGCACCACTCGCCGGCCCCAAAATTCACC
GACCAAAATCCTGCTCAGGAAAT---------------------------------------------------------
------------------------------------TATCATTGCCAACTTCCTGCTCCGCCTCGAGATGCATGCATGAT
CATTCAGACTATTATTCGTTAATCCCCACACTTA-----------------------------GGCTAGTTCTACTCCAC
TCTGTGACACACCGTACTTGCCTGACGTTCAAATTAATGTCAGGTTAATTACTCACTGCTTGCTGCAGCGCAGCAGCTGC
ATGCTGCCGCCTGCTCCCGAGCAAAGTGGCTGAGCTAGCGAGCTAGCTAGGCTTCCA--CCACTGCAGCAGAGTGCAGTT
TAGCTCGTGTACGTACT-C-AGCTTTTGTCCCGTCTCTTCTAACAAAGCGCAAGCTGAGAAGTTTCCTAAAATACCCTTG
CTATTATTAGGGCCGAGCCTGTGGGCACCGGGGGTGACGCTGTCATTGCGCGCGTCCTCTTCGCCAATTATAATGCCACC
CACGCTAACGTAGCACGCGGGTGTACCC----------------CTTCCACATTGACGAGTCAAGACGT-------GATG
CAGTCGACGGAGTCCGCCCAGCGCCGGGCCTCCTCCACGGCCGCCACCGCGCCCCGGCGGAGCATGGGGTGCATGGCCG-
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-------------------------------------------GCCTCCTCCGCCTTCTCTCCCCGTACCATCGCCACCG
GAAGCGTCTCACCGCCAAGAACGCCACGCCCGAGGCCTCCCTACCGCCCCCGTCTCCACCGCCCATGAAGAAGCCGGCAG
CGTCGTCGGCACCGACGCAGGTCCCAGGGAAGCCGCAGACGCCGACAGCTGTCCGGCGGCGGCGTTCATGCGAAGCGCCT
CGGAGCCCGACGATCGCTCCGGAGTACCGCCGGGCCAGCTGTGACAGCCCCAGGCCGCCGCCGCCAGCTATCGTCGCGCG
CCTAATGGGACTGGAG----------------------------------------------------------------
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------------------------------------------------------GAGTCCGCGCCGGCTTCCCCCGCCAC
GACCCCGCGGCCACGACCGCTGCCGACC-------------------CGCCCTCCTCCTCCCCCGCCACCAGAGATGGCC
GCCGAGAAGCGGCGCAAGCTGCTGGGCGCGCTGGAGAAATGCGACGACGACCTCCAGACACTGCGGCGGATCATCGCGGC
CGTCCGGGCTGCCGAGCTGCGGTCGGCCGCTGCGTCCGACGTCTCGCCGGCTCCGGCAGGGGAAGGCAAGGGCGCCAAGT
GGATGGACGGCTCGCCGCCGCTGCAGCAGAAGCCGCGGGCCGAGGCGCAGTATCCCAGCCCGGACTC-GGTGCTGGACGC
CATCATCTCACCGAGATTTCCATGCAGGAAGCGGTCGTCTCCATGCACACATCTCGATGCAGACAGCAAGCCCGAGATTT
CCCGTTGCGGCAACGACGCGCTCATAGTACGATCCAAGATCGTGAAGCCCTCCCGAACACTTGTTTTCTCCGGTACGTGC
TGCTATCTCTGATTCTCTGTCGCTCAAATACACAGTTCTCCATATAACTCACGTATACGTGCACGCATTTTATACTCGTA
CTCTGATGATCTGCACCGTGTTAGTTTCTCCAGATTAATTAAGCTTAAGTTTAGTGGTTTACGTGCCACATCAAATTTGT
CAGTTGTCACTATCTTTTGTTTGTCGTGAAAAATATGGTGCGGGCTTCACGGTAACACGTGTGGTTTCTCGTGTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACGAGCTGCACGCCATGGCCATGTACCACCACCCGGCGACGGTGG
CGGCCGTCGAGGGAATGCCGCGGTGGACGCCGTCAGCAGCCGAGGCGCAGGGCTGGCAGCATCGGCGACGGTGGGGCCTC
CAGGGCCCAGAGCGGAGCCGCGCGATGGTGGAGAGCGTGGGCGAGGTGTGGGGGCAGGGCGCCGGCGAGGAGCGGTGGGA
GGCCGGCCTCGTCGGCGCCGCGCTGGAGCGCGCCATCCTGCAGGAACTGGTCTTGGACGTCGTGACGGAGCTGCTCGCGC
ACTCCGAGCG------------GCCGTTCGGCCAGTTTGGCCGCGGGCACGACCA---CGGCGGCGGTGCCATGTGCCGG
AAGAGGCTCTGTTTCTGAGCGATTTGGCGTGCTCTGTTCTGGCTTTCATGCGTACATAGTGCTGTACTA-----------
--------------------------------------CGAGTGGAGCAAGCCAGGCACGTACGGTATGTAGTCCAAGGG
GTGGATGTCGGTGACTGACGCCCCCATGATGGTGGTGGTGGTGGTATTGAAAGATGGGATACGCTGTGGCGCCCTTGTAG
GTGAGGGCAATAAAGTGACGCGTCGCTTTAGAATGTGGGGGGTGATGAAGTGAGCACAGTGAGAGTGACTCCGCTTTGCG
CTTTGCGATCATGAGGTCGGCTCCACGCGCAGCCGC-----GCGCCCACAAGGACACAACACACAAGGCGTTGGGTCAAG
CTTGCATACGAGATGGAGAAGGATGCGTGTCCAGCTCCATGGA-------------------------TCATTTAGTGGT
ATAGTACTAGTAGCAGTACATTTTTTTT--TCTGGATTTAC--GAGTTTATGTGGACCGTTGTGACCATTTACGTCATTC
T---TGTTCTGGATATACTGATTAATACCGGCTAATTAATTTTCTTAACCTTGTAACTTTTCCAAAATAGGAGTATATAG
TAGTAGTGCTTTCTTGCTCGCTTTGTATTCCGCCTAGGTCCCTTGGGAAAAAAAATATCATTCGAAATAGGCGGGAGGTG
TTCGAACGAGGTCGAGGATTGATGATTCATAGATGTTGGAAAAAAAA-----GTGACATTTTCTATTTCAAAATAATGAA
CCTCTCCACCGTTAAAAAGG-ATCATTGAAGGAACCGTCACAGGATCAATAACCAAGGGGCTAATCACTTTTTTTTCTCT
CTCTGGGATTATTCTCGTTGGCCGAAATTATGGGTAGGAAGCACGAGCAGTGGAGCATGCTTGGGATCCAGTGAGGCCAA
CTCCACCGCGTGACCCTATCCTATCCGCTCCCGTCCGTTTGAGGTAAAATGGACGAATAGCGCAGCCCAGCGCACGATCT
CAAACGGACAAATGTCCGAATTCCGTTCGTTTTCAATCCATCCCCGGCCCAAATTTGCGCTCGGTTTGGGGTGAAACGGA
CGCGCGCGGACGGCTTGGACGCACGCCCTTGTTCCTCCTTGGCTCGCCTGTCGGGGACACTAGCAGTCCCTCCGCTCCCA
AACGCTTCCACCCCCTCTCTCTCTCGCCCCGCCCGCTGCCGGCACCGCCACTATTCTCCGACCGCCTCCTCACCGCGCAG
CCTCCGGCCGTCCCTACCAAACCACTTCTCGACATGGCCGCCACCACGCCCGTGCTGTGGCCGTAGTTTTGGCCGCCGAT
CAGAGGTTTGGCCATCGACGTCTTTGCCGGCCGTAGAGGGGACAGGACCGCCGGCGACGCAGCACGGCGCCCTCGGCAGC
TCCCGACGAGAGCTTCACAGTGGCCAGTAGCCGGCCGGCAACCACCCCTGCTGTGTCGAGGTGATCTTCGCCACCACGCC
CGCAAGGTGTTCGGCATTTTGCCCACAAAGGTATGGACAGTGGAGACGAGTTTTTCTTCCATCACTTTCTTTGTTCATCG
GATGATTCGTCGTCGGATGATGAAGATATTGTGGTGGTTGCACTGGTCGTTCACGACCACATTCAACGGCAGCTTCCTCG
GTACAGGGGGTCACTCCCTGGCCGTGCTCCCAACCTGAACTACAACAGGGAGAGAGGGCACGCCCTGCTCTATGCCGATT
ACTTTGCCAACACCCCGCTCTTCAAGCCGGATAAATTCCGCCGCCGTTTTCGAATGGCAAGTCATGTGTTCAATCGTATC
CGAGAGGGAGTGGTTGCTCATGACCCATACTTCGAGTGCAAGACGGATGCCCTTGGCAAGCTTGCATTCTCCTCTTACCA
GAAATGCACCGCGGCCATCCGCATGCTTGCATATGGAATTCCAGGCGATCTGGTGGATGAGTATGTGCGTATGAGTGAGA
CAACATGTCTGATGTCAATGTACAAGTTTTGCCAGGCTGTGATCGAGGTGTTTGGCCCAGAGTACTTGAGGCAGCCAACT
GCCGCTGATACAGAGAGATTGTTGGCGACCAACGCAGCTAGAGGCTTTCCAGGCATGCTTGGCAGCATAGATTGTATGCA
CTGGGAGTGGAAGAACTGTCCATTTGCTTGACAGGGTCAGTACAAAGGGCATGTCAAGGCGTGCACTGTCATATTAGAAA
GCGGTGGCATCACAGGATCTTTGGATATGACATTCTTTCTTCGGCATGGCAGGTTCTCACAATGATATCAACGTGCTGCA
ACGTTCTTCAGTCTTCGCGAGGCTTGCAGAAGGCCACTCCCCACCTGTCAACTTTGATATCAACGGCCACCATTACAATA
AGGGATACTATCTAGCAGATGGTATATATCCTCAGTGGTCAATTTTTGTGAAGACAATCTCGAAACCCCAAGATGAGAAG
AGAAAGAGATTTACCCAAATGCAAGAGAGTGTTAGAAAGGATGTGGAACGTGCTTTTGGTGTGCTTCAATCCCGGTGGGG
TATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGTTTTGGGAGGTGATGACTACTTGTGTGATCATGCACAACA
TGATCGTCGAGGACGAGCGTGATGAGAGTATCTTTGACCAAGGATTTGACTATCAAGATGAAAATATTGAGCCCCTGCAC
CAAGACCTGGCCACATTTGAACAGTTTGCTCAATTCCATCGTGAGATGTGTGATTGGCACTCTCATTTGATTTTTTAAAA
TGACTTGGTTGAGCACGTGTGGGATCACATGGGCAATCAATAGATGTATTGGTCCATTTTATGTTTAGTCAAGACAATTT
CGATTTGGTTGTAAAAATATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATTTTAATTTTCAAACAAATATTCG
GGTTGTAATCTAGTTTTGATGAAAATTTGGGCATTTTTGGCCTTAGCGGACAGTATAGGGCACAAGGATGCGTCCGCGCG
ATGGCGCACGGCCACCGCATCCGAAGACACGTCCGAATACGATCTCAAATCATTACCCAAACGGATAGAATCCGAATAAA
ACGGACATCCGTTTGAAGTCGCGCGCGCGGAAGTTGGCCTCAGAACGCAGGCAGGGCAGGGCGAGCCCGCTAGGCGTGCG
TAGGCGTGCCTAGGCTTGCTTTTTTTTTCAGGGAGTGCCTAGGCTTGCTGATTGAAAATCCTACAGCAGGTAGTACTTGG
------------------------------------------------------------
>chr4B_33
--------------------------------CGCATGCATGTCCTAGAGGAGAGTGGATACCGTAAACTTGA---TATT
TCTTACGCTTCCAAAGCCATTGTTTTTT-GTAGCA---------------------------------------CGCGTC
CTGTGGAAGTTTTAGGTTTTGACCCATAGAGGCCGG-CGGGCACTGGGTCGTATCTTGAGACTTTAGTATATTTACAGGC
CGGAGGTGTAAACTTGAAGCTAAAGCAATGAAGGAAAAAAAAACAATTGCAGAGCT-CATGTCTCATCATGATGCTGGAA
AACTCGATATTCTCCCTTTTTACCATGTGATGTGTTTGCCCAGCAGAGCACCACT---------GGCCCCAAAATTCACC
GACCAAAATCCTGCTCAGGAAAT---------------------------------------------------------
------------------------------------TATCATTGCCAGGTTCCCGTTCCGCCTCGAGATGTATGCATGAT
CATTCAGACTATTATTCGTTAATCCACTCTGTGATGGTTAATTACTCATGACTGCCCGGCTTTAGCTAGTTCTACTCCAC
TCTGTGACACACCGTACTTGCCTGCCGTTCAAATTAATGTCAGGTTAATTACTCACTGCTTGCTGCAGCGCAGCAGCTGC
ATGCTGCCGCCTGCTCCCGAGCAAGGTGGCTC--------AGCTAGCTAGGCTAGGCTTCCACTGCTGCAGAGTGCAGTT
TAGCTCGTGTACGTCCT-CCAGCTTTTGTCCCGTCTCTTCTAACAAAGCGCAAGCTGAGAAGTTACCTAAAATACCCTCG
GTATTATTAGGGCCGAGGCTGTGGACACCGGGGGTGACGCAGTCATTGCGCGCGTCCTCTTCACCAATTATAATGCCACC
CACGCTAACACAGCACGCGGGTCTAGTGCAGCTACCTCTCTCAACTTCCACATTCACGAGTCAAGACTCAAGACGCGATG
CAGCCAACGGAGTCCGCCCAACGCCGGGCCTCGTCCACGGCCGCCACGACGCCCCGGCGGAGCGTGGGGTGCATGGCCG-
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-------------------------------------------GCCTCCTCCGCCTGCTCTCCCCGTACCATCGCCACCG
GAAGCGCCTCACCGCCAAGAACGCCACGCCCGAGGCCTCCCTACCGCCGCCGTCTCCGCCGCCCATGAAGAAGCCGGAAG
CGTCCAAGTCACCAACGCAGGCCCCAGGGAAGCCGCAGACGCCGGCAGCTGTCCGGCGGCGGCGTTCATGCGAAGCACCT
CGGAGCCCGACGATCGCTCTGGAGTACCGCCGAGCCAGCTGTGACAGCCCCAGGCCGCCGCCGCCAGCCATCGTCGCGCG
CCTAATGGGCCTGGAG----------------------------------------------------------------
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------------------------------------------------------GGGTCTGCGCCGGCTTCTCCCGCCAC
GACCCCGCGGCCACGACCGCTGCCGACC-------------------CGCCCTCCTCCTCCCCCGCCACCAGAGATGGCC
GCGGAGAAGCGGCGCAAGCTGCTGGGCGCACTGGAGAAATGCGACGACGACCTCCAGACACTGCGGCGGATCATCGCGGC
CGTACGGGCTGCCGAGCTGCGGTCGGCCGCTGCGTCCGATGTCTCGCCGGCTCCGGCAGGGGAAGGCAAGGGCGCCAAGT
GGATGGACGGCTCGTC---------------GCCGCGGGTCGGGGCGCAGTATCCCAGCCCGGACTC-GGTGCTGGACGC
CATCACCTCACCGAGATTTCCATGCAGGAAGCGGTCGTCTCCATGCACACATGTCGATGCAGACAGCAAGCCCGAGATTT
CCCGTTGCGGTAACGACGCGCTCATAGTACGATCCAAGATCGTGAAGCCCTCCCGAACACTTGTTTTCTCCGGTACGTGG
TGGTATCTCTGATTCTCTGTCGCTCAAATACACAGTTCTCCATATAATTCACGTATACGTGCACGCATTTTATA---GTA
CTCTGATGATCTGCACCGTGTTAGTTTCTCCAGATTAATTAAGCTTAAGTTTAGGGGTTTACGTGCCACATCAAAATTGT
CAGTTGTCAGTATCTTC----TGTCGTGAAAAATATGCAGCAGGCTTCACGGTAACACGTGTGGTTTCTCGTCTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACGAGCTGCACGCCATGGCCATGTACCACCACCCGGCGACGGTGG
CGGCCGTCGAGGGGATACCGCGGTGGACGCCGTCGGCAGCCGAGGCGAACGGCTGGCAGCATCGGCGGCGGTGGGGCCTG
CAGGGCGCAGAGCGGAGCCGGGCGATGGTGGAGAGCATGGGGGAGGTGTGGGGGCAGGGCGCCAGCGAGGAGCGGTGGGA
GGCCGGCCTCGTCGGCGCCGCGCTGGAGCGCGCCATCCTGCAGGAACTGGTCTTGGACGTCGTGACGGAGCTGCTCGGGC
ACTCCGAGCGGGAAGCGCAGGCGCCGTTCGGCCAGTTTGGCCGCGGGCACGACCA---CGGCGG---TGCCATGTGCCGG
AAGAGGCTCTGTTTCTGACCGATCTCGCGTGCTCTGTTCTGGCTTCATGCGTGCG------------TACGTACGTACGT
GTATTAATCTGAGGAGCTGGCCGGGCTCAAGTGAAGTGCGAGTGGAGCAAGCCACGAACGCAC-GTACGTAGTCCAAGGG
ATGGATGTCGGTGACTGACGACCCCATGATGTTGGTGGTGGTGGTATTGAAAGATCGGATACGCTGTGGCGCCGTTGTAG
GTGAGGGCAATAAAGTGACGCGTCGCTTTAGAATGTGGGAGGTGATGAAGTGAGCACAGTGAGACTGACTCT-------G
CTTTGCGATCATGAGGTCGGCTCCACGCGCAGCCTTGCGTTGCGCCCACAAGGACACCA-ACACAAGGCGTTGAGTTAAG
CTTGCATACGAGATAGAGAAGGATGCGTGTCCAGCTCCATGGAAATTTACATGTACGAGTAGGACTCATCATTTAGTGGT
GTAGTACGAGTAGTAGTACAGTTTTTTTTTTTTGGATTTACGAGAGTTTATGTGGACCGCTGTGCCCATTTCCGTCATTC
TTGTTGTTCTGGATATACTGATTAATACCGGCTAATTAATTTTCGTCACCTGGAAACTTTTCTAAAATACT--------G
TAGTAGTGTCTTCTTGCTCGTCTTCTATCCCGCCTAGGTC----------------------------------------
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>chr7D_907
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---------------------------------------------------------------CCAATTATAATGCCACC
CACGGTAACACAGCATGCGGGTCTAGTGCAACTACCTCTCTGAACTTCGACATTCACGAGTCAAGACTCAAGACGCGATG
CAGTCGATGGAGTCCACCCAGCACTGGGCCTCGTCCACGGCCGCCACGGTGCCCCGGCGGAGCGTGAGGTGCATGGCTGG
CCTCTGCTACCTTTTGAGCATGCGTTGGTTTTCCCTTGAAGAGGAAAGGGTGATGCAGCAAAGTAGCGTAAGTATTTCCC
TCAGTTTTTGAGAACCAGTTTATTAATCCAGTAGGAGGCCACACGCAAGTCCCTCGTACCTACACAAACAAATAAGAACC
TTGCAACCAACGCGATAAAGGGGTTGTCAATCCCTTCACGGCCACTTGCAAAAGTGAGATCTGATAGAGATGATAATATT
TTTGGTATTTTTATGATAAAGAGTAAAATTAAAGAACGCAAAGTAAAATAGATTGGAAACTTATATGATGGAGAATAGAC
CCGGGGGGCATAGGTTTCACTAGTGGCTTCTCTCAAGATAGCATAAGTATTACGGTGGGTGAACAAATTACTGTCGAGCA
ATTGATAGAATTGAGCATAGTTATGAGAATATCTAGGCATGATCATGTATATAGGCATCACGTCCGCAACAAGTAGACCG
ACTCCTGCCTGCATCTACTACTATTACTCCACACATCGACCGCTATCCAGCATGCATCTAGAGTATTAAGTTCATAAGAA
CAGAATAACGCATTAGGCAAGATGACATGATGTAGAGGGATAAACTCAAGCAATATGATATAAACCCCATCTTTTTATCC
TCGATGGAAACAATACAAAACGTGTCATTTCCCCTACTGTCACTGGGATCGAGCACCGCATGATTGAACCCAAAGCTAAG
CACTTCTCCCATTGTAAGAAAGATCAATCTAGTAGGCCAAACCAAACTGATAATTCGAAGAGACTTGCAAAGATAACCAA
TCAAACATAAAAGAATTCAGAGAAGATTCAAATATAGTTGATAGATAATCTTGATCATAAACCCACAATTCATCAGATCT
CGACAAACACACCGCAAAAAGAGTTACATTGAATAGATCTCTAAGAAGATCGAGGAGAACTTTGTATTGAGATCCAAAGA
GAGAGAAGAAGCCATCTAGCTAATAACTATGGACCCGAAGGTCTATGGTAAACTACTCACACATCATCAGAGAGGCTATG
GTGTTGATGTAGAAGCCCTCCGTGATCAATGCCCCCTCCGGCGGAGCGCCGGAAAAGGCCCCAAGATGGGATCTCACAGG
TACAGAAGGTTGCGGCGGTGGAAATAGGGTTTCGTGGTGCTCCTGGATGGTTTCGGGGTGCGTAGGTATATATAGGAGGA
AGAAGTAGGTCGGTGGAGCCACGAGGGGCCCACGAGGGTGGGGGCGCGCCCAGGGGGCAGGCGCGCCTCCCTGCCTCGTG
GCCTCCTCGGTTGTTTCTTGACGTCCACTCCAAGTCCTGTGGATCACGTTTGTTCCAAAAATAACTCTCCCGAAGGTTTT
ATTCCGTTTGGACTCTGTTTGATATTACTTTTCTGCGAAACACTGAAATAGGCAAAAAAACAGTAATTTGCACTGGGCCT
TGGGTTAATAGGTTAGTCCCAAAAATAATATAAAATTGTAAAATAAAGCCCATTAAACATCCAAAACAGAATATATAATA
GCATGGAGCAATCAAAAATTATAGAAACGTTGGAGATGTATCAGCCTCCTCCGCCTGCTCTCCCCGTACCATCGCCACTA
GAAGCGTCTCATGGCCAAGAATGCCACACCCGAGGCCACCCTACCGCCGCCGTCTCCGCCGCCCATGAAGAAGACGGAAG
CGTTGAAGTCACCAACACAGGCCCCAGGGAAGCCGCGGACGCCGACAGCTGTCCGGCGGTGGCGTTCATGCGAAGCACCT
CGGAGCCCCACGATCGCTCCGGAGTACCGCCGGGCCAGCTGTGACAGCCCCAGGCCGCAGCCGCCAGCCATCATCGCCAG
CCCTGCGCCTCAGCTGCCGACGGCGTCCACCGCGGCATTCCCTCGACGATTGCCACCGTCGCCAGGTAGTGGTAAATGGC
CATGGCATGCAACTTGTTGCAGTATTGCTTGATCTTGCAGTAGTCCCCTGCATGAACGAGGCGAGAAACCACACGTGTTA
CCGTGAAGCCTGCTGCATATTTTTCAGGACCGAAGATAGTGTCAACTGACAAATTTGATGTGGCACATAAACCCCTACAC
TTAAGCTTAATTAATCTGGAGAAACTAACACGGTGCAGATCAGAGTACTAAAAATGTGTGCATGTATACGTGACTTATAT
GGAGAACGGTGTATTTGAGGGACAGAGAATCAGAGATGCCACCACGTAGCGGAGAAAACAAGTGTTCGGGAGGGCTTCAC
GATCTTGGATCATACTATGAGTGCATCGCTACTGCAACGGGTAATCTCGGGCTTGTTGTCTGCATCGAGATGTGTTCATG
GAGACGAACGCTTCCTGCATGGAAATCTCGGTGAGGTGATGGCGTCCAGCACCAGAGTCCGGGCTGGGATACTGCGCCTC
GGCCCACGGCTTTTTCTGCAGCGGCAGCGAGCCGTCCATCCACTTGGCGCCCTTGCCTTCCCCTGCCGGAGCCAGCGAGA
C-------------------------------------------------------------------------------
---------------------GTCGGACGCAGCGGCCGACCGCAGCTCGC------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAGCCCGGACGGCCGCGATGA
TCCGCCGCAGTGTCTGGAGGTCGTCGTCGCA-------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTTCTCCAGCGCGCCCAGCAGCTTGCGCCGCTTCTCCAC-----------------
------------------------------------------------------------GTGGTTTATATTCTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACGAGCTGCACACCATGGCCATGTACTACCACCCGGCGATGGTGG
CGGCCGTCGAGGGAATG-CGCGGTGGACGCCGTGGGCAGCTGAGGCGTAGGGCTGGCAGCATCGGTGATGGTG-------
--GGGCCCAGAGCGGAGCCGCGCGATGGTGGAGAGCTTGGGG-AGGTGTGGGGGTAGGGCGCTGGCGAGAAGCAGTGGGA
GGCCGGCCTCGTCGGTGCTGCGCTGCAGCGCGCCATCCTACAGGGAATGGTCTTGGACGTCATGATGGAGCTGCTCACGC
ACTCCGAGCG------------GCCGTTTGGCCAGTTTGGCCATGGGCACGACCACGGCGGCGG---TGCCATGTGCCGG
AAGAGGCTCTGTTTCTGA--------------------------------------------------------------
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>chr7D_1456
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--GGAGAAGCGGCGCAAGCTGCTGGGCGCGCTGGAGAAATGCGACGACGACCTCCAGACACTGCGGCGGATCATCGCGGC
CGTCCGGGCTGGCGAGCTGCGGTCGGCCGCTGCGTCCGACGTCTCGCTGGCTCCGGCAGGGGAAGGCAAGGGCGCCAAGT
GGATGGACGGCTCGCTGCCGCTGCAGAAAAAGCCGTGGGCCGAGGCGCAGTATCCCAGCCCGGACTCTGGTGCTGGACGC
CATCACCTCACCGAGATTTCCATGCAGGAAGCGTTCGTCTCCATGAACACATCTCGATGCAGACAACAAGCCCGAGATTA
CCCGTTGCAGTAGCGATGCACTCATAGTATGATCCAAGATCGTGAAGCCCTCCCGAACACTTGTTTTCTCCGCTACGTGG
TGGCATCTCTGATTCTCTGTCCCTCAAATACACCGTTCTCCATATAAGTCACGTATACATGCACACATTTT-TA---GTA
CTC---TGATCTGCACCGTGTTAGTTTCTCCAGATTAATTAAGCTTAAGTGTAGGGGTTTATGTGCCACATCAAATTTGT
CAGTTGACACTATCTTC----GGTCCTGAAAAATATGCAGCAGGCTTCACGGTAACACGTGTGGTTTCTCGCCTCGTTCA
TGCAGGGGACTACTGCAAGATCAAGCAATACTGCAACAAGTTGCATGCCATGGCCATTTACCACTACCTGGCGACGGTGG
CAATCGTCGAGGGAATGCCGCGGTGGACGCCGTCGGCAGCTGAGGCGCAGGGCTGGC-----------------------
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------------------------------------------------------------
>SNPs
-----S----S----S--------------------S-------------------------------------------
----------------------------S-------------------SS------------------------------
--------------------------------------------------------------------------------
------------------------------SS-----------------S----S-------------------------
---------------------------------S----------------------------------------------
-------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S--------------------
--------------S----------------SS---------------------------------------------S-
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-----------------S-----------------------------------------S-----------S--------
----------------S------------------------------------------------------------S--
---------------------------S-------------------S--------------------------------
-----------------------------------------------------------------S--------------
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------------------------------S-------------------------------------------------
-----S------------------------------------S-------------------------------------
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------------------------S------------------------------------------------------S
-----------S--------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
----------------------------------S-----------------S---------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------------------S---------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------S---------------S---------------------------------------------------------
---------------------------S-----------S------------S---------------------------
-----------------------------------------------------------------------S--------
-------------------S----------------------S-------------------------------------
------------------------------------S-----S-------------------------------------
--------------------------------------------------------------------------------
-----------S----------------S-----S-------------------------------------S----S--
-----S---------------------S----------------------------------------------------
--------------------------------------S---------------------------------SSS-----
-----------------------------------------S------------S-------------S-----------
------------------------S--------SS---S---SS-S-SSSSS------------S---------S-----
-----------S-----SSSS----------S--------S--------S---S---S----------------S--S--
-------------------------------------------S------------------------------------
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--------------------------------------------------------------------SSS-SSSS-S-S
-SSS--SS-SS-SS-SS-SSSSSSSSSS-SSS-S----S-----------------------------S-----------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_37
-----------------TGAAGTCGTTTACAGCGCAC-------------------------------------------
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>reverse_3875
--------------------------------------------------------------------------------
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----------------------------------CCGTCTCCATGCACACATATC-------------------------
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------------------------------------------------------------
>forward_272
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-----------ACTTGAAGCTAAAGCAACGGG------------------------------------------------
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>reverse_4160
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-------------------------------------------------------------------------------C
CAGTTGTCACTATCTTCTGTCG----------------------------------------------------------
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>forward_3893
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---------------------------------GCCGTCTCCATGCACACATA---------------------------
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>reverse_7937
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----------------GCACCGACTAATACGGGGAG------------------------
