>input_sequence_49799
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-----------------------------------------------------------------------------ATG
GAGGAGGAGGGCGCGAGGAAGGCGGTGCTCTTCCGGCTGTTCGGCGTCGAGGTCCGCGGCGCGGAGGAGGAGGATGACGC
GGAGCCCATGGAGCTCAAGAAGAGCACCAGCATGCCCAACCTCGCCTGCGCCTCCAACAGCCCGCCGCTTCTCCTGCCCG
GCGAGGCCAGCCACGACAAGGGCTACGCCTCCGACGACGGCGAGCTGGCGTCCACGCCGCAGCTCAAG---CGCTGCCGC
CGCAAGGCCCAGGAGCGCAAGAAAGGTAACGCGATTGACCTCCATCTGGATCACGCACGGTTTCTTGATTTCTTCTACCC
TCCTGTCTTGTAGTCCAACCCGTAGAGAGCTCTACTGTTCCATTCGTTCATGCGGTTTACAGATTCCTGCAATTATTAAG
GTGTTTTGGGGGAATAATCATCTGATCGCTTAATTAAC---TAA---------TAGTGATTTGTGAGTGGAAATTTCGTC
CTGGACCAAAGAAATCAAGAAACTGAGTTCAAGCTATCTTGACCTTTATGTATCATCAAAGTGTAGTGTTACTAGCAGTC
GATGGATCTTACGATCCCACCTCCTGAATAACAATTTGATTAGTCCTTCCGTGTTGCTTCCTAGTAGTAGTCCTAATACG
ATGAATCATGCAGCAAGTGGTTGATTGAGATTCTG-T-TCAGGGATTCCGTGGACCGAGGAGGAGCACAGGAAGTTCCTG
GAGGGTCTGAAGCAGCTGGGCAAGGGGGACTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCTAGCCACGCCCAGAAGTACTTCCTCCGGCAGACCAACCCCGGCAAGAAGAAGCGCCGGGCCAGCCTCTTCGACGTCG
GCATCCCCGCTGCCCACAGCTACGACGATCAGGTACTCGGATCCAGTCCAGTTCACGCCAAGCACTACTCCAAACATCCA
TCGGATCGCGCAGCAGCTAATATATGCAGTGTACTCAATTTCAATTTGGTTTCAGCTGCCAAGTCCTCAGAGCGTTGGAA
CCAAGCTTGCTCCTGCTGAGAAGATACTCCACACAGACCGCGGCGACGTGCCGGTAAATTCCACAGAATTCATGTTTCAT
CTTGTTTCCTGCTAGATCGAGTTTCCGTTTTGTCTGAACACTGACTGAATCTTGAACCTCGCCTCAGCTACCAAGTTATC
CTGGAGGCATCAGGGGCAGCA------------ACAACAACATGCAGATGCAGGTAAAGCCACCT-----------TTAC
ATCTGAGAACATGTTCTGATGTAACAACAACAGTGTGAGCAAAAGCTTTACACCAACCGGGTCCTTTCTTCTGGCAGGCT
GATGAGCTAACTGACCGTGTGAAGAAGAGATCAAAGTTCCCCACCGGGACGTCGCTGGCCGCCATGGCTGCCTCCGGGCT
GGAGCTGGCAATGTCTTCGTCTGCCAGCAGCATCCTGGAGCTCAGCATCGCGCCTCCTCGCTGCTACGGCGCGGTCGACG
CCATCAAGGTGCTGTGA---------------------------------------------------------------
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>chr1A_1_TraesCS1A01G218800
TCGTCAGAGCAGCACACACTCATTTATGTGGTTCGGTGGTGACGAAAGAGGACTTGAAGGTGGTGGCTAAGCCGCAGAGG
TTAGGCACAAATACATAGGTTGGGCAGCTGTCTCCGAGGTGAGGGAGGAGATATAA-CCTATTTTTTGTTACTGGAGTTA
TCGTTTGTGATGGGGGTACATGTGGAGGTGGCAAGAGGGTGATGCCGTGGGGCGGGACGGGTATGAAGAGGCCAACGGTG
GCAGTGTTGATGGTGATGTCGGCCAATAGGCGGGAAAATAAGAAGTGATGGTGCTTG-TGGATACAGTGAATAGACGAGA
GAATGAGAACGAGAGTGATGATCTATAGTGCATTAAGGCATGGCGGCGGCGAGCATAACAAGGGATTCGTCCACCGTGCA
ATTTC----TAGCCCATGTATAGCATAAAGTAATACTCCCTTCGTTCCTAATTATAAGTCGTTTTAGAGATTTCAACAGG
GACTACATACGTACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCATACATAGTCCGCATTGG
AATCTTTT-----AGACTTATATTTACGAATGGACGGAGTAATAT-----AAAAAAATATTGAAACG-AGGCAGAAGATT
AAGGAGCAAAGCATTTATGCCTGTGCTAAAAGTATGGAAAATTTTGGAATTAAAAGCCTACTCCAGAAAGCAAGTCGTGG
AGAAA-AACAAATGCACATACAGCAAGGAAAAAACAAAAACAAGGACGCGCCTATCTTATAAATGGAGAAGGAGGGGAGA
CGGTAGCAGGTGCCGGTAAGTAGGCAGTGAGGACAAAGCCACCCACCCACCAAGAGTCAG-------------------T
CTCTCCCTCCTTCCCCTCGTGCGGTAGCCTCCAAATCATCCAACGTCCAATCCACTTCCAACAAGATACCGCCACCATCC
TCCGCCTGATCCGACCTCTCTTCCATCAGCGACAGCGACCCCGCAACCCCCGGCTCCATCGACCATCGGGCGAGGGAATG
GAGGAGGAGGGCGCGAGGAAGGCGGTGCTCTTCCGGCTGTTCGGCGTCGAGGTCCGCGGCGCGGAGGAGGAGGATGACGC
GGAGCCCATGGAGCTCAAGAAGAGCACCAGCATGCCCAACCTCGCCTGCGCCTCCAACAGCCCGCCGCTTCTCCTGCCCG
GCGAGGCCAGCCACGACAAGGGCTACGCCTCCGACGACGGCGAGCTGGCGTCCACGCCGCAGCTCAAG---CGCTGCCGC
CGCAAGGCCCAGGAGCGCAAGAAAGGTAACGCGATTGACCTCCATCTGGATCACGCACGGTTTCTTGATTTCTTCTACCC
TCCTGTCTTGTAGTCCAACCCGTAGAGAGCTCTACTGTTCCATTCGTTCATGCGGTTTACAGATTCCTGCAATTATTAAG
GTGTTTTGGGGGAATAATCATCTGATCGCTTAATTAAC---TAA---------TAGTGATTTGTGAGTGGAAATTTCGTC
CTGGACCAAAGAAATCAAGAAACTGAGTTCAAGCTATCTTGACCTTTATGTATCATCAAAGTGTAGTGTTACTAGCAGTC
GATGGATCTTACGATCCCACCTCCTGAATAACAATTTGATTAGTCCTTCCGTGTTGCTTCCTAGTAGTAGTCCTAATACG
ATGAATCATGCAGCAAGTGGTTGATTGAGATTCTG-T-TCAGGGATTCCGTGGACCGAGGAGGAGCACAGGAAGTTCCTG
GAGGGTCTGAAGCAGCTGGGCAAGGGGGACTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCTAGCCACGCCCAGAAGTACTTCCTCCGGCAGACCAACCCCGGCAAGAAGAAGCGCCGGGCCAGCCTCTTCGACGTCG
GCATCCCCGCTGCCCACAGCTACGACGATCAGGTACTCGGATCCAGTCCAGTTCACGCCAAGCACTACTCCAAACATCCA
TCGGATCGCGCAGCAGCTAATATATGCAGTGTACTCAATTTCAATTTGGTTTCAGCTGCCAAGTCCTCAGAGCGTTGGAA
CCAAGCTTGCTCCTGCTGAGAAGATACTCCACACAGACCGCGGCGACGTGCCGGTAAATTCCACAGAATTCATGTTTCAT
CTTGTTTCCTGCTAGATCGAGTTTCCGTTTTGTCTGAACACTGACTGAATCTTGAACCTCGCCTCAGCTACCAAGTTATC
CTGGAGGCATCAGGGGCAGCA------------ACAACAACATGCAGATGCAGGTAAAGCCACCT-----------TTAC
ATCTGAGAACATGTTCTGATGTAACAACAACAGTGTGAGCAAAAGCTTTACACCAACCGGGTCCTTTCTTCTGGCAGGCT
GATGAGCTAACTGACCGTGTGAAGAAGAGATCAAAGTTCCCCACCGGGACGTCGCTGGCCGCCATGGCTGCCTCCGGGCT
GGAGCTGGCAATGTCTTCGTCTGCCAGCAGCATCCTGGAGCTCAGCATCGCGCCTCCTCGCTGCTACGGCGCGGTCGACG
CCATCAAGGTGCTGTGATCGACCCCCGGCTGCCA-----GGCCTGGCCGAAGGGATTGATCTGATCTGCACCACCACCAG
CTTAGCTTCATGTGGCGCCCCTGTTCTCGTTGCCGTGCTAACCTTGTTGCCCGTCGATCGTCCTAGTAGCTTTTTCAGCT
AGTGTATGGAGTAAAATACATAAGAATTTGCTTGCTTTGGTACAAGTTGGTGAAGGGAAACCAGAGAGGATATGTGTAGT
AGGTTTGTTTGTAATGTATGGTTACCAAATTTAATTAATGTTATCAGTGCTTGCATCGCATGGAGACATCACCGAGATAT
TGGAATTGGCGTTGGAAGGGCCCCCATGGCGGGCATCGCGCTCATGAATTGAACCACGC---AAGTGGGGTTGGTTTCTT
GTTGCCGTCTGAGGAGGCAGCCATGACAGGAGAGGACGCCTTCTTTCTCTGCCTGTGTGGCTCTGAGCTTCCAATGGCTT
CAATAATTGGGCTCTGCCTGCATTTTGCTCCTCGTCG-----------TCAGTCCATGGCACGGCAACATCAATCGGGCG
TGCTACGAGCATGCGATATCCTCCTGTCTCCTGGCAGTTGTGATGCTAGCAGAGGGAGGTGGACAGAAGCAACCAGCGAA
ACCGTGCCGAACTCAGATTTTTT-TTTG--CTGTCGGATCATGTTGGCTGCACGAGCTGTGCATA---------------
-----------------CCTCGCGATAATCACGATCGCAAAATCTCGTCCGTCCATTCTAAACGAAATCCTTTCCACCCG
GTTGACAGCTAAAGAAAACTGAGATGCTTATCTAATCCCCATTCGGCGACGGGCGAATTCCGCACGGAACAGCCCGATCC
TCACAGGAATGGAC-AAGATTTTATTACGGCACTCGCACGCAAACCGGTTTGG---------CACATGCGATATCACATC
ATGTGCATGCTCATAGAGTCATAGTCCACATCTACAGCGGCGTC-GGGGGAAAGGATAGAAGGATGGGTGTGATGGAGTC
GCGGATAGGATGTATGGATATCTCGATAGGGTGACGAGTGGC
>chr1D_1
TCGTGAGAGCAGCACACAAACTCTTATGTGGTTCGGTGGTGACGAAAGAGGACTTGAAGGTGGTGGCTAAGCCGCGGAGG
TTAGGGACAAATACGTAGGTTGGGCAGCAGTCTCCGAGATGAGGTAGGAGAATATACCCTAATTTTTGTTACTGGAGTTA
TGGTTTGCGATGGGGGTACATGTGGAGGTGGCAAGAGGGTGATGCCGTGGGGCGGGGCGGGTATGAGGAGGCCAACGGTA
GCAGTGTTGATGGTGATGTCAGCTAATAGGCGGGAAAATAAGAAGTGATGATGCTTTTTGGATACAGTGAATAAACGGG-
GAATGAGAATGATAGTGGTGTTCTATAGTGCAGTAAGGCATGGCGGCAGCGGGCGTAGCAAGGGGATGGTCCACCGTGCA
ATTTCTTCATAGCCTATGTATCGCATAAAGTAATACTCCCTTCGTTCCTAATTATAAGTTGTTTTAGAGATTTCAATAAA
GACTACA----TACGGATGCATATAGACATATTTTAGAGTGT-GATTCACTCATTTTGTTCTGTATGTACTTCGCATTTT
GGAATCTCTAAACAGACTTATATTTATGAACGAAGGGAGTAATTTTTGAAAAATTAATATTGAAACGAAGGCAGAAGATT
AAGGAGCGAAGCATTTATGCTTGTGCTAAAAGTATGGAAATTTTTGGAATTAAAAGCCTACTCCAGAAAGTAAGTCGTGG
AGAAA-AAAAAATACACATACAGCAAGGAAAAAACAAAAACAAGGACGCGC-----TTATAAATGGAGAAGGAGGGGAGA
CGGTAGCAGGTGCCTGTAAGTAGGCAGTGAGGACAAAGCCACCCACCCACCAAGAGTCAGTCTCTCCCGGTCCCGGCTCT
CCCTCCCTCCCTCCCCTCGTGCGGTAGCCTCCAAATCATCCAACGTCCAATCCACTTCCAACAAGATACCGCCACCATCC
TCCGCCTGATCCGACCTCTCTTCCATCAGCGACAGCGACCTCGCAACCCCCGG---CT----CCATCGGGCGAGGGAATG
GAGGAGGAGGGCGCGAGGAAGGCGGTGCTCTTCAGGCTGTTCGGCGTCGAGGTCCGCGGCGCGGAGGAGGATGATGACGC
GGAGCCCATGGAGCTCAAGAAGAGCACCAGCATGCCCAACCTCGCCTGCGCCTCCATCGTC---CCGATTCTCCTGCCCG
GCGAGGCCAGCAACGACAAGGGCTACGCCTCCGACGACGGCGAGCTGGCGTCCACGCCGCAGCTCAAG---CGCCGCCGC
CGCAAGGCCCAGGAGCGCAAGAAAGGTAACACGATTGACCTCCATCTGGATCACGCACGGTTTCTTGATTTCTTCTACCC
TCCTGTCTTGCA---CAACCCGTAGAGAGCTCTACTGTTCCATTCATTCATGTGGTTTACAGATTCCTGCAATTATTGAG
GTGTTTTTGGGC-ATAATCATCTGATCGCTTAATTAAC---TAA---------TACTGATTTGCGAGTGGAAATTTTGTC
CTGGGTCAAAGAAATCAAGAAACTGAGTTGAAACCATCATGACCTTTATGTATCATCAAAGTGTAGTATTAGTAGTAGTT
GATGGATCTTACTATCCCAG---CTGAATAACAATTTGATTAGTCGCTCCGTGTTGCTTCCTAGTAGAAGTCCTAGTACG
ATGAATCATGCCGCAAGTGGTTGATTGAGATTCTG-TTTCAGGGATTCCATGGACCGAGGAGGAGCACAGGAAGTTCCTG
GAGGGTCTGAAGCAGCTGGGCAAGGGGGACTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCCAGCCACGCCCAGAAGTACTTCCTCCGGCAGACCAACCCCGGCAAGAAGAAGCGCCGGGCCAGCCTCTTCGACGTCG
GCATCCCCGCCGGCCACAGCTACGACGATCAGGTGCTCGGATCCAGCCCAGTTCGCGCCAAGC---ACTCCAAACATCCA
TCGGATCGTGCAGCAGCTAATATATGCACTCTACTGAA-TTTAATTTGGTTTCAGCTGCCAAGTACTCAGAGTGTTGGAA
CCAAGCTTGCTCCTGCTGAGAAGATACTCCACACCGACCGCGGCGACGTGCCGGTAAATTCCACAGAATTCCCGTTTCAT
CTTGTTTCCTGCTAGATCGAGTTTCCGTTTTGTCTGAACACTGACTGAATCTTGAACCTCGCCTCAGCTACCAAGTTATC
CTGGAGGCATCAGGGGCAACA------------GCAACAACATCCAGATGCAGGTAAAGCCATTTAGCACCTTTAGTTAC
ATCTGACAACATCTTCTGATGTAGTAACCACAGTGTGAGC-AAAGCTTTACACCAACCGGGTCCTTTCTTCTGGCAGGTT
GAAGAACTAACTGACCATGTGAAGAAGAGATCAAAGTTCCCCACCGGGACGTCGCTGGCCGCCATGGCTGCCTCCGGGCT
GGAGCTGGCAATGTCTTCATCTGCCAGCAGCATCCTGGAGCTCAGCATCGCGCCTCCTCGCTGCTACGGCGCGGTCGACG
CCATCAAGGTGCTGTGATCGATCCCCGGCTGCCA-----GGCCTGGCCGAAGGGATTGATCTGATCTGCACCACCACCAG
CTTAGCTTCATGTGGCATCCCTGTTCTTGTTGCCGTGCTAACTTCGTTGTCCGTCGATCGTCCTAGTAGCTTTTTCAGCT
AGTGTATGGAGTAAAATACATAAGAATT-GCTTGCTTTGGTACAAGTTGGTGAAGGGAAACCAGAGAGG--ATATGTAGT
AGGTTTGTCTGTAATGTATGGTTACCAAG-TTAATTAATGTTATCAGTGCTTGCATCGCATGGAGATATCACCGAGATAT
TGGCATTGGCGTTGGAAGGGCCCCCAT----GGCATCGCGCTCATGAATTGAATCACGCAAGAAGTGGGGTTGGTTTCTT
GTTGCCATCTGAGGAGGCAGCGATGACAGGAGAGGACGGCTTCTTTCTCTGCCCGTGTGGCTCTGAGCTTCCAATGGCTT
CAATAATTGGGCTCTGCCTGCACTTTGCTCTCCATGTCCACTCACTCATCGGTCCATGGCACGGCAACATCAGTCGGGCG
TGCTACGGGCATGCGATATCCTCCTGTCTCCTGGCAGTTGTGATGCTAGCAAAGGGAAGTGGACAGAAGCAACTAGCGAA
ACCGTGCCAAACTCAGATTTTTCCTTTG--CTGTCGGATCATGTTGGCTGCACGAGCCGTGCATAACCGACATGTGCGCG
GCGTGATTTCATCATCTCCTCGAGATAATCACGATCGCAAAACCTCGTCCGTTCATTCGAAAAGAAAGCC-TTCCACCCG
GTTGACAGCTAAAGGAAACTGAGATGCCTACCCAGTCCCCATTCGGTGACGGACGAATTCCGCACGGAACAGCTCGATCC
TCATAGGAATCGACAAAGATT---TTACGGCACTCGCACGCAAACCGGTTTGGTA-----CGCGTATGTGATATCACATC
ATGTGCATGCTCATAG--------TCCACATCTACAGCAGCGCCGGGGGGAAAGGATAGAAGGATGGGTGTGATGGAATC
GCGGATAGGATGTGTGGATATCTCGATAGGGCGACCAGTGGC
>chr1B_604
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-----------------------------------------------------------TTGAAACG-GGGCAGAAGATT
AAGG-GCCAAGCATTTATGCTTGTGCTGAAAGTATGGACAATTTTGGAATTAAAAGCCTACTCAAGAAAGTAAGCCGCGG
AGAGGGAAAAAATACAGATACAGCAAGGAAAAAACAAAAACAAGGACGCGC-----TTATAAATGGAGAAGG-GGGGAGA
CGGTAGCAGGTGCCGGTAAGTATGCAGTGAGGACAAAGCCACCCACCCACCAAGAGTCAGTCTCTCCCGGCCC------T
CCCGCCCTCCCTCCCCTCGTGCGGTAGCCTCCAAATCATCCAACGTCCAATCCACTTCCAACAAGATACCGCCACCATCC
TCCGCCTGATCCGACCTCTCTTCCATCAGCGACAGCGACCTCGCAACCCCCGG---CT----CCATCGGGCGAGGGAATG
GAGGAGGAGGGCGCGAAGAAGGCGGTGCTCTTCAGGCTGTTCGGCGTCGAGGTCCGCGGCGCCGAGGAGGAGGATGACGC
GGAGCCCATGGAGCTCAAGAAGAGCACCAGCATGCCCAACCTCGCCTGCGCCTCCACCGAC---CCGATTCTCCTGCCCG
GCGAGGCCAGCAACGACAAGGGCTACGCCTCCGACGACGGCGAGCTGGCGTCCACTCCGCAGCTCAAG---CGCCGCCGC
CGCAAGGCCCAGGAGCGGAAGAAAGGTAACACGATTGACCTCCATCTGGATCACGCACGGTTTCTTGGTT-CTTCTAGCC
TCTTGCCTTGTA---CAACCCGT----AGCTCCACTGTTCCATCCATTCATGTGGTTTACAGATTCCTGCAATTATTGAG
CTGTTTTTGGGC-ATAATCATCTGATCGCTTAA----C---TAA---------TAGTGATATGTGAGTGGAAAATTTGTC
CTGGATCAAGGAA-TTAAGAAACGTACTTCAAGCTATCATGACCTTTATGTATCACCAAAGTGGAATGTTAGTAGTAGTT
GA-----------------G---CTGAATAACAATTTCATCAGTCGCTCCGTGTTGCTTCCTAGCAGTAGTCCTAGTACG
ATGAATCATGCCGCAAGTGGTTGATTGAGATTCTGGT-TCAGGGATTCCGTGGACCGAGGAGGAGCACAGGAAGTTCCTG
GAGGGTCTGAAGCAGCTGGGCAAGGGGGACTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCAAGCCACGCCCAGAAGTACTTCCTCCGGCAGACCAACCCCGGCAAGAAGAAGCGCCGGGCCAGCCTCTTCGACGTCG
GCATCCCCGCTGGTCACAGCTACGACGATCAGGTACTCGGATCCAGTCCAATTCGCGCCAAGC---ACTCCAAACATCCA
TCGGATCGCGCAGC---TAATGTATGCAGTCTACTGAATTTCAATTTGGTTTCAGCTGCCAAGTCCTCAGAGTGTTGGAA
CCAAGCTTGCTCCTGCTGAGAAGATACTCCACACCGACCGCGGCGACGTGCCGGTAAATTCCACTGAATTCCTGTTTCAT
TTCGTATCCTTCTACATCGAGTTTCCGTTTTGTCTGAACACTGACTGAATCTTGAACCTCGCCTCAGCTACCAAGTTATC
CAGGAGACATCAGGGGCAACAACAACAACAACCACAACAACATGCAGATGCAGGTAAAGCCACCT-----------TTAC
ATCTGAGAACATGTTCTGATGTAACA---ACAGTGTGAGC-AAAGCTTTACACCAACCGGGTCCTTTCTTCTGGCAGGCT
GATGAGCTAACTGACCATGTGAAGAAGAGATCAAAGTTCCACAGCGGGACGTCGCTGGCCGCCATGGCTGCCTCCGGGCT
GGAGCTGGCGATGTCTTCGTCTGCCAGCAGCATCCTGGAGCTCAGCATCGCGCCCCCTCGCTGCTACGGCGCGGTCGATG
CCATCAAGGTGCTGTGATCGGTCCCCGGCTGCCGGGCCTGGCCTGGCCGAAGGGTTTGATCTGGG-----CCACCACCAG
CTTAGCTTCATGTGGTGTCCCTGTTCTTGTTGCCGTGCTAACCTTCTTGCCCGTCGATTCGCGTAGTAGCTTTTTCAGCT
AGTGTAAGGAGTAAAATACATAAGAATT-GCTTGCTTTGGTACAAGTTGGTGAAGGGAAACCAGAGAGG--ATATGTAGT
AGATTTGTTTGTAATGTATGGTTACCAAA-TTAATTAATGTTATCGGTGCCTT-----CATGGAGATATCACCAAGATAT
TGGAATTGGCGTTGGAAGGGCCCCCATGGC-GGCATCGCGCTCATGAATTGAATCACGCAAGTT---GGGTTGGTTTCTT
GTTGCCATCTGAGGAGGCAGCGGTGACAGGAGAGGACGGCTTCTTTCTCTGCCTGTGTGGCTCTGAGCTTCAAATGGCTT
CAATAATTGGGCTCTGCCTGCATTTTGCTCCTCATCG-----------TCAGTCCATGGCACGGCAACATCAATCGGGCG
TGCTACGAGCATGCTATATCCTCCTGTCTCCTGGCAGTTGTGATGCTAGCAGAGGGGAGTGGACAGAAGCAACCGGCGAA
ACCGTGCCTCATTCAGATTTTTC-TTTTCCCTGTCGGATCATGTTGGCTGCACAAACCGTGCATAGCTGACATGTGCGCG
GCGTGATTACATCATCTCCTCGCGACAATCACGATCGCAAAACCTCGTCCGTTCATTGGAAACGAAAGCCTTTCCACCCG
GTTGACAGCCAAAGGAAACCGAGATGCCTACCCAGTCCACATTCGGCGACGGGCGAATTCCGCACGGAACGGCTCGATCC
TCATAGGAATCGAC-AAGATT---TTACGGCACTCGCACGCAAACCGGTTTGGAAGTGTGCGCATATGTGATATCACATC
ATGTGCATGCTCATAG--------TCCACATCTACAGCAGCGCCGGGGGGAAAGGATAGAAGGATGGCCGTGATGGAATC
GCGGATAGGATGTGTGGATATCTCGATAGGGTGACGAGTGGC
>chr5B_843
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-------------------------------------------------------------------------------T
CCCTCCCTCTCTCCCCTCGTGCGGTAGCCTCCAAATCATCCAACGTCCAATCCACTTCCAACAAGATACCGCCGCCATCC
TCCGCCTGATCCGACCTCTCTTCCATCAGCGACAGCGACCACGCAACCCCCGGCTCCT----CCATCGGGCGAGGGAATG
GAGGAGGAGGGCACGAAGAAGGCGGTGCTCTTCAGGCTGTTCGGCGTCGAGGTCCGCGGCGCGGAGGAGGATGATGACGC
GGAGCCCATGGAGCTCAAGAAGAGCACCAGCATGCCCAACCTCGCCTGCGCCTCCACCGAC---CCGTTTCTCCTGCCCG
GCGAGGCCAGCAATGACAAGGGCTACGCCTCCGACGACGGCGAGCTAGCGCCCACGCCGCATCTCAAG---CGCCGCCGC
CGCAAGGCCCAGGAGCGGATGAAAGTTAACGCGATTGTCCTCCATCTGGATCACACACGGTTTCTTGGTTTCTTCTACCC
TCCTGTCTTGTA---CAACCCGTAGAGAGCTCTACTGTTCCATTCGTTCATGTGGTCTACAGATTCCTGCAATTATTGAG
GTGTTTTTGGGC-ATAATCATCTGATCGCTTAA----CTAATAA---------TAGTGATTTGTGAGTGGAAATTTCGTC
CTGGACCAAAGAAATCAAGAAACTGACTTCAAGCTATCATGACCTTTATGTATCATCAAAGTGTAGTATTAGTACTAGTT
GATTGATCTTACTATCCCAG---CTAAATAACAATTTGATTAGTCGCTCCGTGTTGCTTCCTAGTAGTAGTCCTAGTACG
ATGAATCATGCCGCAAGTGGTTGATTGAGATTCTG-GTTCAGGGATTCTGTGGACCGAGGAGGAGCACAGGAAGTTCCTG
G------------------GCAATGGGGAGTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCCAGCCACGCCCAGAAGTACTTCCTCCGGCAGACCAACCCCGACAAGAAGAAGCGCCAGGCCAGCCTCTTCGACGTCG
GCATCCCCGCTTCCCACAGCTATGACGATCAGGTA---------------------------------------------
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>chr3B_953
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-----------------------------CGTCAGCGACCTCTAAACCCCCGGCTCCT----CCATCGAGGGAGGAAATG
GAGGAGGAGGGCACG-AGAAGGCGGTGCTCTTCAGGCTGTTCGGCGTTGAAGTCAGCGGTGCA---GAGGAGGATGACGC
AGGGCTCATGGAGCTGAAGCAGAGCACCAGCATGCCCAACCTCGCCTCCATCAAACCCTA--------TTCTGCCACCCG
GCGAGGCCAGCCACGACAAGGGCTACACGTCCGACGACGGCGAGCTAGCGTCCATGCTGCGGCTTAAGCGTCGCCGCCGC
TGCAAGGCCCAGGAGCAAAAGAAAGGTAACATGATTGACCT----------------CGGTTTCTTGATT-CTTCCATCG
TCCTGTCTTGTA---CAACCTGTAGAGAGCTCTACTGTTCCGTTCATTCATGTGGTCTGCAGATTCCTGCAATTATTGAG
GTCTTTTTGGGC-ATAATCATCTGATCGCTTAA----CTAATACTGTATTGAGTAGTGATTTGTGAGTGCAAATTCCGTC
CTGGATCAAAGAAACTGAGAAACTGTGTTGAAGCTGCCATTTCCTTTATGTATCATCCAAGTGTAG---------CAGTC
GATGGATCTTACAATCCCAC---CT-------------------------------------------------------
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>chr3B_1210
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----------------------------------------------GGCGTCCACGTCGCAGCTCAAG---CGTCGCCAA
CGCAAGGCCCAGGAGCGGAAGAAAGGTAACACGATTGTCCTCCATCTGGATCACGCACGGTTTCTTGGTTTCTTCTACCC
TCCTGTCTTGTA---CAACCCGTAGAGAGCTCTACTGTTCCATTCGTTCATGCGGTCTACAGATTCCTGCAATTATTGAG
GTGTTTCTGGGC-ATAATCATCTGATCGCTTAA----CTAATAA---------TAGTGATTTGTGAGTGGAAATTTCGTC
CTGGACCAAAGAAATCAAGAAACTGACTTCAAGCTATCATGACCTTTATGTATCATCAAAGTGTAGTATTAGTACTAGTT
GATTGATCTTACTATCCTAG---CTGAAAAACAATTTGATTAGTCGCTCCGTGTTGCTTCCTAGTAGTAGTCCTAGTACG
ATGAATCATGCCGCAAGTGGTTGATTGAGATTCTG-GTTCAGGGATTCCATGGACCGAGGAGGAGCACAGGAAGTTCCTG
GAGGGTCTGAAGCAGCTGGGCAA-GGGGACTGGAGAGGCATCTCCAAGAACTTCGTCACCACCAGGACGGCCACGCAGGT
GGCCAGCCACGCCTAGAAGTACTTCCTCTGGCAGACCAACCCAGGCAAGAAGAAGCGTCGGGCTAGCCTCTTCGACGTCG
GCATCCCCGCTTCCCACAGCTACGACGATCAGGTA---------------------------------------------
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>SNPs
----S-------------SS-SS----------------------------------------------------S----
-----S--------S-------------S---------S-----S------SSSS------S------------------
-S-----S------------------------------------------------S---------S------------S
--------------------S--S--------------------------S-----S----------------S---S-S
---------S--S----S--S-----------S--------------S---S--S--S------SS-S------------
--------------S------S-------------------------------------S----------------S-SS
-------SSSS--------S--S-------------------S---------------S--SS--SS--S-S------SS
SSSS-S-S------------------S---S-S-S--------S---------SS-------------------------
-------S------------S-------------------------------------------------S---------
--------S----S-------------------------------------SSSSS------------------------
--------------------------------------------------------------------------------
-S--------S---------------------------------------------------------------------
----------------------------------------S----------------SSSSS------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------S-SS-SSS---S------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
------------SSS--------------------------------------------------------------S--
-------S---SS-------------------------------------------------------------------
--------------------------------------S--------------------------------S--------
------------S-------SSS----------------------SS----------------------------S----
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
------------------------------------------------------S--------SSS--------------
------------------------------S----S------------------------------------S-------
----------------------------------S------------------------------------S--------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------------------S-----------S---------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-----------------S---------S----------------------------------------------------
----------------------------S----------------------------------------SS--S------
-----------------------------S------------------------------------S-------------
------------------------------S----------------------S--------------------------
------S--------------S----------------S-----------------------------------------
---------------------------------S----------------------------------------------
---------------------------------------------------------S----------------------
--------S-------------S----------------------------------S----------------------
------------------------------------------S---------S-----S--------S------------
--------------S------------S--S-S-S--------------------------------------S------
---S------S----------SSS----------------------------------------S---S-----------
----------------SSSSSSSS--------------S---S----------------------------------S--
-------------S----------------------------
>forward_22
--GTCAGAGCAGCACACACTCA----------------------------------------------------------
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>reverse_2073
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------------------------------------------------------------------------CGTTGGAA
CCAAGCTTGCTC--------------------------------------------------------------------
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>forward_415
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---------------------------------------------------------------------------CACCG
TGCAATTTCTAGCCC-----------------------------------------------------------------
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>reverse_2259
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCAACAACAACATGCAGATGC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_772
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AACAAAAACAAGGACGCGCC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------AAAAGCTTTACACCAACCGGG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_882
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CACCCACCAAGAGTCAGT
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2749
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGCTTGCTTTGGTACAAGTTGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
