>input_sequence_49783
--------------------------------------------------------------------------------
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------------------------------------------ATGGCTTCCCTCTGTAACGTCTCCGATCTCTCTCGTGA
TCCCGCCGACACAATCTTCCTGTACGTCTGACGTGTGTTTGCGTGCGTGCGTGCGCAGGGGTCGTCGTCGCGGCGGCGCT
GCTGGTCCTCGGGTGCGCGAGCAGCGGCGCGACGGCGCGGCCGCTGGTCGGCGCGGCGGCGGCGAAGCAGCCGCTGCAGA
CGTCGCGGCCGTACAACATCGCGCACAGGGGCTCCAACGGCGAGCTCCCTGAGGAGACGGCGGCGGCGTACATGCGCGCC
GTCGACGAGGGCGCCGACTTCATCGAGGCGGACATCGTGGCCACCAAGGACGGCCACCTCGTCTGCTTCCACGACGTGAC
CCTGGACGACACCACCGACGTCGCCGACCACAAAGAGTTCGCCGCCCGCCGCCGCACGCTCCAGGTGCAGTGGGCCAACG
TCACCGGATACTTCATCAGTACGCCCGCCCATCCATCCATCATAACCACCTTCTTATTTTCGACCGGAATCTTAACCACA
CTCCTATCTTGGATCGATCCGCG----AAGATCCAGCGATCAATTAATCATTCGATTGCCTTGCTGATTTGGCAGCTGAT
TTCACGTTGGCCGAGCTGAAGACGCTGCGAGTGAAGCAGAGATGGTCATTCCGTGACAAATCTCACGATGGTACGCGTAC
ATTAATTCCATTATTATTCTGGTGAAATCAGCCCATCCATGCATCTAGTAGATGTTAATCCCCTTTGTTTCTCAAGGCAT
TTCTCCCATCATCACCTTCGACGAGTTCATCGACATCGCGCTGAACGCCAAGAGGGTCGTCGGGATCTACCCGGAGATGA
AGAGCCCCGTGTTCATCAACCAGCACGTACGTCATCAACACACATCCATAAACAAAGCCACAAAATAGTTC---------
----GTAAATTGTCCATGAATTCATTTGTCGAC-----CGATGGCAACAATTGCAGGTGAAGTGGGCGGACGGGAAGAAG
TACGAGGACAAGTTCATCGCGACGCTGAAGAAGTACGGGTACGGCGGCAAGTACATGACGAAGCGGTGGACGGAGAGGCC
GGTGTTCATCCAGTCCTTCGCGCCGACGTCGCTCATCTACGCCGCCGACCTGACCGACTCGCCCAAGGTGTTCCTCATCG
ACGACGTGACGGTGCGGACGGAGGACACGGACCAGTCGTACGAGGAGATCACCTCGGACGAGTACCTGGACTACATGAGG
GAGTACGTGGTCGGGATCGGGCCGTGGAAGGACACGGTGGTGCCGCCGACCAGGGACAACACGCTGACGACGCCCACGGA
CATGGTCGCCATGGCGCACGCCAGGGGCCTGCAGGTGCACCCCTACACGTACCGGAACGAGAACCGCTTCCTGCACTACA
ACTTCAGGCAGGACCCCTACGCCGAGTACGACTACTGGCTCAACGACGTCGGCGTCGACGGTCTCTTCACCGACTTCCCC
GCCAGCCTCCGCCGCTTCCAGGACTGGACCGCCGCCAAGAACTGA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G183800
GGTACTTGATCGGTCGGATCGTGAAGACGTACGACTACATCAACCGCGTTGTGCTAACGCTTCCGCTTTCGGTCTACGAG
GGTACGTGGACACACTCTCCCCTCTCGTTGCTATGCATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTTAAATTAC
TACGTTCCCCAACAGTATCTTGGTGCATCAGCAGTAAGATACACAGGTATTAACGATCCGGCGACACTCGAAGCCTTGGC
GTGCAGAGAAGCTCTCTCCCTCGCCCTCGACCTCTCACTATCTCATGTGTTGGTAGCCTTAGATTGCAAGGAGGTTGTCG
CGGACATACACAAGGGCACGGGCGGCCTTTGCGCGAGCATTGTTAAAGAGATCATCTCCGGAGGTTCGCAGTTTTCAGCA
TGCTCCTTCATCTTCGAAGGGCGTGAAACAAACTTTGAGGCGCACAGCCTCGTCAAACACACTTTGGGACTCTCTCCGGG
ACGCCATCTCTGGCTACTTAATCCCCTGGATTTATCGTGTATGCCTATGTATTTGGATATTGATCAATAAATGAGAGTGT
GTTTGGACTCAAAAAAAATTTGCAGCCAAGACACTCAAGATTGTTTTCAAAAAGAAAAGAAAAAACTCGGGATCTCTATT
ATAAATATCCGTATATAAAGTTC-AAAAATAAAGAAAATACATTATATACTTTTTCTAGAGGGAACGAGAGTATCCCACT
ATACCTAAGAGATTGTTAGCAACTAAATAACAGAATATTAGAATGTGAAACAACCCCAAAATCTTGTTACTTGTTAGGAT
ATTCCTCGCAAGTCTTATCATATATACTCGGCCTCGCCGCCATCTCAACTACCCCAAAATCTTGTTACTTGTTAGGATAT
TCCTCGCAAGTCTTATCATATATACTCGGCCTCGCCGCCATCTCAACTACCCCAC-CACCACCCACGGGCAGCCGGCGGT
AGCGCTACGCCGCCAACACAAGCTCGCGCGCCGTGCGGGGAAATGGCTTCCCTCTGTAACGTCTCCGATCTCTCTCGTGA
TCCCGCCGACACAATCTTCCTGTACGTCTGACGTGTGTTTGCGTGCGTGCGTGCGCAGGGGTCGTCGTCGCGGCGGCGCT
GCTGGTCCTCGGGTGCGCGAGCAGCGGCGCGACGGCGCGGCCGCTGGTCGGCGCGGCGGCGGCGAAGCAGCCGCTGCAGA
CGTCGCGGCCGTACAACATCGCGCACAGGGGCTCCAACGGCGAGCTCCCTGAGGAGACGGCGGCGGCGTACATGCGCGCC
GTCGACGAGGGCGCCGACTTCATCGAGGCGGACATCGTGGCCACCAAGGACGGCCACCTCGTCTGCTTCCACGACGTGAC
CCTGGACGACACCACCGACGTCGCCGACCACAAAGAGTTCGCCGCCCGCCGCCGCACGCTCCAGGTGCAGTGGGCCAACG
TCACCGGATACTTCATCAGTACGCCCGCCCATCCATCCATCATAACCACCTTCTTATTTTCGACCGGAATCTTAACCACA
CTCCTATCTTGGATCGATCCGCG----AAGATCCAGCGATCAATTAATCATTCGATTGCCTTGCTGATTTGGCAGCTGAT
TTCACGTTGGCCGAGCTGAAGACGCTGCGAGTGAAGCAGAGATGGTCATTCCGTGACAAATCTCACGATGGTACGCGTAC
ATTAATTCCATTATTATTCTGGTGAAATCAGCCCATCCATGCATCTAGTAGATGTTAATCCCCTTTGTTTCTCAAGGCAT
TTCTCCCATCATCACCTTCGACGAGTTCATCGACATCGCGCTGAACGCCAAGAGGGTCGTCGGGATCTACCCGGAGATGA
AGAGCCCCGTGTTCATCAACCAGCACGTACGTCATCAACACACATCCATAAACAAAGCCACAAAATAGTTC---------
----GTAAATTGTCCATGAATTCATTTGTCGAC-----CGATGGCAACAATTGCAGGTGAAGTGGGCGGACGGGAAGAAG
TACGAGGACAAGTTCATCGCGACGCTGAAGAAGTACGGGTACGGCGGCAAGTACATGACGAAGCGGTGGACGGAGAGGCC
GGTGTTCATCCAGTCCTTCGCGCCGACGTCGCTCATCTACGCCGCCGACCTGACCGACTCGCCCAAGGTGTTCCTCATCG
ACGACGTGACGGTGCGGACGGAGGACACGGACCAGTCGTACGAGGAGATCACCTCGGACGAGTACCTGGACTACATGAGG
GAGTACGTGGTCGGGATCGGGCCGTGGAAGGACACGGTGGTGCCGCCGACCAGGGACAACACGCTGACGACGCCCACGGA
CATGGTCGCCATGGCGCACGCCAGGGGCCTGCAGGTGCACCCCTACACGTACCGGAACGAGAACCGCTTCCTGCACTACA
ACTTCAGGCAGGACCCCTACGCCGAGTACGACTACTGGCTCAACGACGTCGGCGTCGACGGTCTCTTCACCGACTTCCCC
GCCAGCCTCCGCCGCTTCCAGGACTGGACCGCCGCCAAGAACTGATCGGCAAACCACACATGAGTACGTGAATACG----
-TAGCCACAGACAGGTTCAGATAGGTTTCTCTCTTCTCCTTGGGTTGTT-------------------------------
CACGGTTTCGCGCCGTGAGATAAATTGATCTCAGGATTGGATTTTGCATTGGCAATACATGGAATGGATTCGTTACATAG
CGACTAGTTTCTCTTATCGTGCATCGTGCGAATG----------------------------------------------
--------------------------------------------------------------------------------
TGATGGTGGTGTCCCCTGTTCTCCGTTAATAC------------------------------------------------
---------------------------------------------------------TATAAGCTAACAGCAACAATATC
AGGCCATGTTTCTTTACAATTTTCTTCAACTGGTGAGAGTTGCCAGGTTTCTTCAGTGGGTCTCCCAACAAGGCAAAATG
GTAACTGTTCATCTTTCTAACCAGAGAAGATAACACTTCTGCTTCGGTAGAACCCCTAAATACATGGACGGCTCAGATTA
TCCGATACCTCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TCGTTAGTAAGGGCATGATGGT
CGTATTGGTAAAAGTAACCTGCACGCGCCCTACGTATACGTATCCTTACGTCCGTGCCGTGAGGCC--TTTTTTTCATCC
GCGGTGGGTGGTGCGATTTGTTCTTTTATGGGAGCGCCAGCCTCGATTTGTTTTCTGAGAAAGTCAAAAAAAAGTGGTAC
ATGCAGAGTCGAACAAGCGACTTCTTCCTCAGATGCGCATTAGCAAATGTGAGATTGCCACTATGGCCGGCGTGCTTATT
ACGACACATTCTAGGTGTTTTGTCTTTGTGACGCCCCCGATTTGACCGTACACTACTCATGCACGCAAATGTGTACGATC
AAGGTCAGGGACTCACGGGAAGATATCACAACACAACTCTACAACATAAATAAGTCATACAAGCATCATAATACAAGCCA
GGGGCCTCGAGGGCTCGAATACAAGTGCTCGATCACAGACGAGTCAGCGGAAGCAACAATATCTGAGTACAGACATAAGT
TAAACAAGTTTGCCTTAAGAAGGCTAGCACAAACTAGGATACAGATCGAACGAGGCGCAGGCCTCCTGCCTGGGATCCTC
>chr2A_578
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATTTGCAGTCAAGAAAGTCAAGATTGTTTTCAAAAAGAAAAGGAAAAACTCGGGATCTCTGTT
ACAAATATCCGTATATAAAGCTCAAAAAATACAGAAAATACATTATATAGATTTTCTAGAGGAAACGAGAGTATCCCACT
ATACCTAAGAGATTATTAGCAACTAAAAAACAGATTTTTAGAACGTGAAACAACC-------------------------
-----------------------------------------------------CCAAAATCTTGTTACTCGTTAGGATAT
TCCTCGCAAGTCTTCTCATATATACTCGGCATCGCCGCCATCTCAACTACCCCTAGCACCACCCACGACCAGCCGGCGGC
AGCGCTACGCCGCCAACACAAGCTCGCGCTCCGTCCGGGGAAATGGCTTCCCTCTGTAACGTCTCCGATCTCTCTCGTGA
TCCCTCCGAATCAATCTTGGCGTACGCCTGACGTGTGTTTGCGTGCGCGCGTGCGCAGGTATCGTCGTCGCGGCGGCGCT
GCTGGTCCTCGGGTGCGCGAGCAGCGGCGCGACGGCGCGGCCGCTGGTCGGGGCGGCGGCGGCGAAGCAGCCGCTGCAGA
CGTCGCGGCCGTACAACATCGCGCACAGGGGCTCCAACGGCGAGCTCCCCGAGGAGACGGCGGCGGCGTACATGCGCGCG
GTCGACGAGGGCGCCGACTTCATCGAGGCGGACATCGTGGCCACCAAGGACGGCCACCTCGTCTGCTTCCACGACGTGAC
GCTGGACGACACCACCGACGTCGCCGACCACAAGGAGTTCGCCGCCCGCCGCCGCACGCTCGAGGTGCAGTGGGCCAACG
TCACCGGATACTTCATCAGTACGCCCGTCCATCCATCCATCATAACCACCTTCCTATTTTCGACCGGAATCTTAACCGCA
CTCCTATCTTCGATCGATCGATGTGCCAAGATCCAGCGATCAATTAATCCATCGATTTTCTTCCTGATTTGGCAGCTGAT
TTCACGCTGGCCGAGCTGAAGACGCTGAGAGTGAAGCAGAGATGGTCCTTCCGTGACAAATCTCACGATGGTACGCGTAC
ATTAATTCCTTCATTATTCTGGTGAAATCAGATCACCCGTCTAC------GATGTTAATCCCCTATGTTTGTGAAGGCAT
TTCTCCCATCATCACCTTCGACGAGTTCATCGACATCGCGCTGAACGCCAAGAGGGTCGTCGGGATCTACCCGGAGATGA
AGAGCCCCGTGTTCATCAACCAGCACGTACGTGATCAACACACATCCATAAACAAAGCCACAAAATAGTTC---------
----GTAAATTGTCCATGAATTCATCTGTCGATCGATTCGATGGCAACGATTGCAGGTGAAGTGGGCGGACGGGAAGAAG
TACGAGGACAAGTTCATCGGGACGCTGAAGAAGTACGGGTACGGGGGCAAGTACATGACGAAGCGGTGGAAGGAGAGGCC
GGTGTTCATCCAGTCCTTCGCGCCGACGTCGCTCATCTACGCCGCCGACCTGACCGACTCGCCCAAGGTGTTCCTCATCG
ACGACGTGACGGTGCGGACGGAGGACACGGACCAGTCGTACGAGGAGATCACCTCCGACGAGTACCTGGACTACATGCGG
GAGTACGTGGTGGGGATCGGGCCGTGGAAGGACACGGTGGTGCCGCCGACGAGGGACAACACGCTGGCGACGCCGACGGA
CATGGTGGCCATGGCGCACGCCAGGGGCCTGCAGGTGCACCCCTACACGTACCGGAACGAGAACCGCTTCCTGCACTACA
ACTTCCGGCAGGACCCCTACGCCGAGTACGACTACTGGCTCAACGACGTCGGCGTCGACGGCCTCTTCACCGACTTCCCC
GCCAGCCTCCGCCGCTTCCAGGACTGGACCGCCGCCAAGAACTGATCGGCAGACCACACATGAGTACCCTATACGTTCAG
ATAGCCACAGGCAGGTTCAGATAGGTTTCTCTCTTCTCCTTGGGTTGTT-------------------------------
CA-------------------------------GGATTGGATTTTGCATTGGCAATACATGGAATGGATTCGTTACATCG
GGACTGGTTTCTCTTATCGTGCATCGTGCGAATG----------------------------------------------
--------------------------------------------------------------------------------
TGATGGT---GTCCCCTGTTCTCAGTTAGTACT-----------------------------------------------
--------------------------------------------------------GTATAAGCTACCAGCAACAGTATC
---------------------------------------TTGCCAGGTTTCTTCAGTGGGTCTCCCAACAAGGCAAAATG
GTAACTGTTCATCTTTCTAACCAGAGAAGATAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2B_868
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTGTTAGGATAT
TCCTCGCAAGTCTTCTCATATATACTCGGCATCGCCGCCATCTTAACTACCCTAC-CGCCACCCACGGCCAGCCGGCAGC
AGCGCTACGCCGCCAACACAAGCTCGCGCAACGTGGGGCGAAATGGCTTCCCTCTGTAACGTCTCCGATCTCTCTCGTGA
TCCCGCTGACTCAATCTTCGTGTACGCCTGACTTGTGTTTGCGTGCGTGCGTGCGCAGGGGTCATCGTCGCGGCGGCGCT
GCTGGTCCTCGGGTGCGCGAGCATTGGTGCGACGGCGCGGCCGCTGGTCGGGGCGGCGGCGGCGAAGCAGCCGCTGCAGA
CGTCGCGGCCGTACAACATCGCGCACAGGGGCTCCAACGGCGAGCTCCCCGAGGAGACGGCGGCGGCCTTCATGCGCGCC
GTCGACGAGGGCGCCGACTTCATCGAGGCGGACATCGTGGCCACCAAGGACGGCCACCTCGTCTGCTTCCACGACGTGAC
GCTGGACGACACCACCGACGTCGCCGACCACAAGGAGTTCGCCTCCCGCCGCCGCACGCTCGAGGTGCAGTGGGCCAACG
TCACCGGATACTTCATCAGTACGCCCGC----CCATCCATCATAACCACCTTCTTATTCTCGATCAGAATCTTAACCACA
TTCCTATCTTGAATCGATCCGCG----AAGATTTAAGGATCAATTAATCAACCGATTGCCTTGCTGATTTGGCAGCTGAT
TTCACGCTGGCCGAGCTGAAAACGCTGAGAGTGAAGCAGAGATGGTCCTTCCGTGACAAATCTCACGATGGTACGCTTAC
ATTAATTTCATCATTACTCCGTTAAAAACAGATCATTCATGCATCCAGA-----TTAATCCCCTTCGTTTGCCCAGGCAT
TTCTCCCATCATCACCTTCGACGAGTTCATCGACATCGCGCTGAACGCCAAGAGGGTCGTCGGGATCTACCCGGAGATGA
AGAGCCCCGTCTTCATCAACCAGCAAGTACGTGATCAACAC----CCATAAACAAAGCCACATCATCTCCCTGAACCCTG
GCTTGTTAACTGTCCATGAATTCACTTGTCGACGTATCA-----CAACGATTGCAGGTGAAGTGGGCGGACGGGAAGAAG
TACGAGGACAAGTTCATCGGGACGCTGAAGAAGTACGGGTACGGGGGCAAGTACATGACGAAGCGGTGGACGGAGAGGCC
GGTGTTCATCCAGTCCTTCGCGCCGACGTCGCTCATCTACGCCGCCGACCTGACCGACTCGCCCAAGGTGTTCCTCATCG
ACGACGTGACGGTGCGGACGGAGGACACGGACCAGTCGTACGAGGAGATCACCTCGGACGAGTACCTGGACTACATGAGG
GAGTACGTGGTGGGGATCGGGCCGTGGAAGGACACGGTGGTGCCGCCGACCAGGGAGAACAAGCTGGCGACGCCGACGGA
CATGGTGGCCATGGCGCACGCCAGGGGCCTGCAGGTGCACCCCTACACGTACCGGAACGAGAACCGCTTCCTGCACTACA
ACTTCCGGCAGGACCCCTACGCCGAGTACGACTACTGGCTCAACACCGTCGGCGTCGACGGCCTCTTCACCGACTTCCCC
GCCAGCCTCCGCCGCTTCCAGGAATGGACCGCCGCCAAGAACTGATCGGCAAACCACACATGAGTAGTACG-TACG----
-TAGCCACAGACAGGTTCAGATAGGTTTCTCT--TCTCCTTGGGTTGTTTACTGTTTCGCGCCGTGAGATAAATTGATCT
CA-------------------------------GGATTGGATTTTGCACTGGCAATACATGGAATGGATTCGTTACATGG
GGACTAGCTTCTCTTATCGTGCATCGTGCGGATGTGATGGTGGTGTCCCCTGTTCTCAGTTAATATTACTCCCTCCGTTT
GGAATTACTTGTCTCGAAAATGGATGTATCTAGAACTAAAATACGTCTAGCTTCTCTTATCGTGCATCGTGCGGATGTGA
TGGTGGT---GTCCCCTGTTCTCAGTTAATACTACTCCCTCCGTTCGGAATTACTTGTCTCGAAAATGGATGTATCTAGA
ACTAAAATACATCTAGATACATACACTTCTGCGACAAGTAATTCCGAACGGAGGGAGTATAAGCTAACAGCAACAATATC
AGGCCATGTTTTTTTACAATTTTCTTCAACTGGTGAGAGTTGTGAGG-TTCTTCAGTGGGTCTCCCAACAAGGCAAAATG
GTAACTGTTCATCTTTCTAACCAGAGAAGATAA-----------------------------------------------
--------------------------------------------------------------------------------
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>chr7D_2882
--------------------------------------------------------------------------------
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----------------------------------------------------CCCCTAAACACATGGAGGGCTCAGATTA
TCCGATACCTCTTCGTTAGTAAAGGCATGATAGTCGTATTGGTAAAAGTAACCCACACGCGCCCTACGTATACGTATGCT
TACGTCCGTGTAGCGAGGCGGGTTTTATTCATCCGAAGTGGGTGGTGCGATTTGTTTTTTTACAAATAGCGGACAAAGTG
CGCGTCCGTTTGTTGACCCCCCTAAACACATGGAGGGCTCAGATTATCCGATACCTCTTCGTTAGTAAAGGCATGATAGT
CGTATTGGTAAAAGTAACCCACACGCGCCCTACGTATACGTATGCTTACGTCCGTGTAGCGAGGCGGGTTTTATTCATCC
GAAGTGGGTGGTGCGATTTGTTTTTTTACATGAGCGTCAGACTCGATTTGTTTTCTCACAAAGTAAAAAAAACCGCG--C
ATGCAGAGTCGAACTAGCGACCTCGTCCTCAGGTGCGCATTACCAAATGTGAGACAGCCACCATTGCCGGCGTACACATT
ACGACACATTCTAGGTGTTTTCTCTTT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------S-----S-S-------------------------S-----------------S--
-S------------------S----------S-----------------SS-----------S-----------------
--------------S------------S------S-S------S-----------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
--------------S---------------S-------------------------------------S----------S
-----------------------------S--------------------------------------------------
----------S--------S------S-----------------------------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
S--------------------------------S---------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
------S--------------------S-------------------S--------------------------------
-----------S-------------------SS------------S--SS--------------------S---------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
------------------------------------------------S-------------------------------
-------------------S------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------------------------------------------------------S-------S-----
------S-------------------------------------------------------------------------
-----S-------------------------------------------------------S------------------
-------------------------------------------------------------------SSS-S--------
--------------------------------------------------------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------S-
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SSS-------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
---------------------------------SSSSSSSSSSSSSSSSSSS--------S-------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S--------S--
-------------------SS----------------------S------------SS-S-----S------S-------
-SS-------------------S-----SSS-----S---S---------------S-S-----S-------SSSS-SS-
--------------S------S--S-------S---------S-----------SS-----S--S--------S-SS---
---------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_50
------------------------------ACGACTACATCAACCGCGTT------------------------------
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>reverse_2045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------CGGCAAGTACATGACGAAGC----------------
--------------------------------------------------------------------------------
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>forward_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCTTCGAAGGGCGTGAAACA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2315
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CACGGA
CATGGTCGCCAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ACAGCCTCGTCAAACACACT-----------------
--------------------------------------------------------------------------------
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>reverse_2462
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------TCTCTTCACCGACTTCCCC
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_479
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CACTTTGGGACTCTCTCCGG-
--------------------------------------------------------------------------------
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>reverse_2552
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATACGTAGC
CACAGACAGGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
