>input_sequence_49670
--------------------------------------------------------------------------------
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-----------------ATGACGTCCCCGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCCAGCGCCGCCAGCGGCCGC
TGCGGCGCAGTCCCCGCCTCCCCGCATCGGCCTCGCCGGCCTCGCCACCATGGGCCAGAACCTCGCGCTCAACATCGCCG
AGAAGGGCTTCCCGATCTCCGTCTACAACCGCACCGCCGCCAAGGTCGACTCCACGCTCTCCCGCGCCGCCGCCGAGGGC
GCGCTCCCCGTGCTCGGCCACCGCGACCCGCGCGACTTCGTGCTCTCCCTCGCGCGCCCCCGCACCGTCGTGCTCCTCGT
CCAGGCCGGCCCCGCCGTCGACGCCACCATCGACGCCCTCTCGCCCTACCTCGACGCCGGCGACGCCATCGTCGACGGCG
GCAACGAGTGGTACCAGAACACGGAGCGCCGCATCGAGCAGGCCGCCTCCCGCGGGATACTCTACCTCGGCATGGGCGTC
TCCGGCGGCGAGGAGGGCGCGCGGAACGGCCCCTCGCTCATGCCCGGCGGCGACTTCCAGGCCTACAGCAACATCAAGGA
CATCCTTGAGAAGGCTGCGGCTCAGACGGAGGACGGCCCGTGCGTCACGTTTGTCGGGCCCGGTGGCGCCGGCAACTTTG
TCAAGATGGTGCACAACGGGATCGAGTATGGTGATATGCAGCTCATCGCCGAAGCCTATGACGTGCTCCACCGTGTTGGT
GGCCTCTCAAACTCGGAGATAGCCGATGTGTTTGCCGAGTGGAACAAGGGAGAGCTGGAGAGCTTCTTGGTGGAGATTAC
TGCAGACATATTCACTGTGGCTGATCCACTGGAGGGGAGCACCGGCGGGGCGCTGGTTGACAAGATTCTTGACAAGACCG
GGATGAAGGGGACCGGGAAGTGGACGGTGCAGCAGGCGGCGGAGCTTGCAGTCGCTGCGCCCACGATTGCAGCATCGCTG
GATGGGAGGTACTTGTCGGGGCTCAAGGATGAGCGAGTTGCAGCCGCAAGTGTGCTAGAGGAAGAGGGGATGCCAGTTGG
GCTTCTGGAGAAGATTAATGTCGATAAGAAGGTGCTGGTGGACAGGGTCAGGCAAGCGCTTTATTCGTCCAAGGTTTGCA
GCTACGCACAGGGGATGAATCTGCTAAGAGCCAAGAGTGTGGAGCAGGGCTGGAATCTTAACCTTGCCGAGCTTTCAAGG
ATTTGGAAGGGTGGATGCATTATTCGGGCAAGGTTTCTTGATAGGATTAAGAAGGCTTATGACAGGAACCCTGAGCTGGC
CAATTTGATTGTCGACAGGGAGTTCGCCAGGGAGATGGTGCAGAGGCAGGGCGCATGGCGGTGGGTTGTGGCCCGGGCAG
TAGAGGCCGGGATTAGCACCCCAGGGATGTCTGCGAGCCTTTCATACTTTGATACCTATAGGTGCAACCGGTTGCCAGCA
AATCTGATCCAAGCACAGAGGGACTTGTTTGGAGCACACACCTATGAGCGCATTGACCGCCCAGGTTCTTTCCACACCGA
GTGGAGTAAGCTGGCGAGGGAGGGCAAGTGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr1A_1_TraesCS1A01G357200
AATTTATTTTGTGTTTTATTTTATCTATCTATCACTACGAGATTTGATCCTTATAATTAACCATCGAGGGATTGACAACC
CCCTTGTTTGCGTTGGGTGCAAGTATTTGCTTTTGTGTGTGTATGTGCTGCTAATGAGGTTCTGCGTGGTTTTCCTACTA
GAGTGATAACCTTGGTTCTTAAGCAAGGGAAATACTTATCTTTATTGTACTGCTTCATCCTCTCCTCTTCGAGGAAATTT
CAACGCACCTCACAAGTAGCAAAACCTAACCTCGCCCCCTCGAGAAGCTGATAGAATCTACGCCGGAACTCTGTCTAATC
CGTCCCAATGGACGAACTTGAGGAGGACCAGAGCCCGAAAGACTGACTCAAAAAAGAAGCGCCGACATCCATCCAAACAC
CGCCCCTGCGAGGACTAAAACCCTACCTATCTACTAGTCGGATCCGAGG---CACCAGAAATCCTCTCACCGCCACCGGC
CGCCGGAGCGGTGGGCAGAGGGGAGGCAAATCCACAGGCTCGTCGGTGAAGATCGAGATGAGTAAGGTAAATGGGG----
----------------------------------------------------------------------------CGAA
AAACCATTTTTAATACATAAAGCTATTAAAAATAAGGGTGAAACATGAAGTTAAGTTTTAGAGGGAAAAATAGAGGCAAG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCTAAATGCAGCCTCCTCCATTTCATTTTTAATAAGGTGTGTGTCTCTGC
CGCAA-CCTGC----GTCGTCACGAAGCTGGCGGACTCGTCGAGGAGGCAAGGGGTGGGTGAGGGTC-GGGTCGAAAACG
ACACACCTCTTGGAAGGCAGCCCGGCTCCTTGTGACCGTTCGATCCGTCCAAGGGCTAGCTGCCTTTTGGCTCCATCGGA
GTGTCCTCCAACGCCACCACGGCGGAGATCTATTTCTATCCCCCGGAACCCTCCGCCCCTTCCCCCCTAAATCTCTCCGC
CCCCTCCGCCGCCTCGCCACCCTCACCTCAGCCTCACCCTC------------------GCCGCCGGCCCCCAGCCCCTC
TCCCAAACCCCTGCCCGATGACGTCCCCGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCCAGCGCCGCCAGCGGCCGC
TGCGGCGCAGTCCCCGCCTCCCCGCATCGGCCTCGCCGGCCTCGCCACCATGGGCCAGAACCTCGCGCTCAACATCGCCG
AGAAGGGCTTCCCGATCTCCGTCTACAACCGCACCGCCGCCAAGGTCGACTCCACGCTCTCCCGCGCCGCCGCCGAGGGC
GCGCTCCCCGTGCTCGGCCACCGCGACCCGCGCGACTTCGTGCTCTCCCTCGCGCGCCCCCGCACCGTCGTGCTCCTCGT
CCAGGCCGGCCCCGCCGTCGACGCCACCATCGACGCCCTCTCGCCCTACCTCGACGCCGGCGACGCCATCGTCGACGGCG
GCAACGAGTGGTACCAGAACACGGAGCGCCGCATCGAGCAGGCCGCCTCCCGCGGGATACTCTACCTCGGCATGGGCGTC
TCCGGCGGCGAGGAGGGCGCGCGGAACGGCCCCTCGCTCATGCCCGGCGGCGACTTCCAGGCCTACAGCAACATCAAGGA
CATCCTTGAGAAGGCTGCGGCTCAGACGGAGGACGGCCCGTGCGTCACGTTTGTCGGGCCCGGTGGCGCCGGCAACTTTG
TCAAGATGGTGCACAACGGGATCGAGTATGGTGATATGCAGCTCATCGCCGAAGCCTATGACGTGCTCCACCGTGTTGGT
GGCCTCTCAAACTCGGAGATAGCCGATGTGTTTGCCGAGTGGAACAAGGGAGAGCTGGAGAGCTTCTTGGTGGAGATTAC
TGCAGACATATTCACTGTGGCTGATCCACTGGAGGGGAGCACCGGCGGGGCGCTGGTTGACAAGATTCTTGACAAGACCG
GGATGAAGGGGACCGGGAAGTGGACGGTGCAGCAGGCGGCGGAGCTTGCAGTCGCTGCGCCCACGATTGCAGCATCGCTG
GATGGGAGGTACTTGTCGGGGCTCAAGGATGAGCGAGTTGCAGCCGCAAGTGTGCTAGAGGAAGAGGGGATGCCAGTTGG
GCTTCTGGAGAAGATTAATGTCGATAAGAAGGTGCTGGTGGACAGGGTCAGGCAAGCGCTTTATTCGTCCAAGGTTTGCA
GCTACGCACAGGGGATGAATCTGCTAAGAGCCAAGAGTGTGGAGCAGGGCTGGAATCTTAACCTTGCCGAGCTTTCAAGG
ATTTGGAAGGGTGGATGCATTATTCGGGCAAGGTTTCTTGATAGGATTAAGAAGGCTTATGACAGGAACCCTGAGCTGGC
CAATTTGATTGTCGACAGGGAGTTCGCCAGGGAGATGGTGCAGAGGCAGGGCGCATGGCGGTGGGTTGTGGCCCGGGCAG
TAGAGGCCGGGATTAGCACCCCAGGGATGTCTGCGAGCCTTTCATACTTTGATACCTATAGGTGCAACCGGTTGCCAGCA
AATCTGATCCAAGCACAGAGGGACTTGTTTGGAGCACACACCTATGAGCGCATTGACCGCCCAGGTTCTTTCCACACCGA
GTGGAGTAAGCTGGCGAGGGAGGGCAAGTGAATGACTTTGCCGCCACCTGAGGAATTTGGTGGTACCATATGTGGTCTCG
GTGACTCTGGGGTGATGTCTCTTCGTGGTTGTCTTTAATTTATCTATTGCTGTTTTTGCAATACGAGATCTGAATTGTGT
ACCTTGAATAATGTAGCGTCTTGTGCTGTATGCACGTGAAGAACATTTGTGTAGCTTCAGG--TTCTATGGTTTAGATAC
ACCCAGTTTTATCCAGTCATAAATTTGGAGCA-ATGGTTTTCATGCCTCACATCCCAATGTTGCCCTGGAAGTCTGATTT
CTAATATGTCAATATGGTGGC-------AAGAGTAGTGACTGATGTTTCTCTACTTCTATGAATCTATTTTAGGTTGTTC
AGTGTTGCAAGG---TGTTTCATTTCACCTGTTGTGCTGTCATCCTACTGTT-------GGAGCTATCTCTGGTCCTGGG
ATGAGTTTCATCTTGTTATGGGCGGGGCCATGCCATATGACATGTATTTGAAAATATC--AAAGATGGAAAATCTGTTTG
ATTGTA----GATACAAAAGGAAATCATTATTAATGAGCCTGCTCGTTCTCAATGAAAATGTCTTCTTGTTTGTTGGATA
GCAAGACTGGACAAATTTTTGCAAATGATTGTTCTT-TTGTTATTGTTGAAGCTTTGTGTTCCAGGAGAACGCTAAATTA
TATCAGAGAGAAAAGAGGTACCTGTGTAGTTTTATGAATTTATACAGTACTTCTGTTCAACTGGTCAAAACTCAAA-CCT
TTGATAAGATATGCAACTAATTTTTCAGATTAATCGTTTCTCCATGTTGATCATGTTTCACTTCT---TTGTACATGTTG
AAGTAGCAAGAATATTTCCCAAATGAAGAATTGCTGTGGCCACCACACTTCTCTTTTGTAATGGTGCCCTGTTGCAAGGG
CTTGACTGTTCTAGTAGTTTGAACACTGCACACCATAACAGTTAACAGGAAAAATGAGCTGAGTCGTTGCACACACTAAT
TTGCAGGTGACAACAGGAACCA
>chr1D_262
AAACCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TAACCTCGCCGTCCCGAAAAGCTGGCAGAATCTATGTCGGAGCTCTATCTAATC
CGTCCCAATAGACGAACTTGAGGAGGATCGGAGCTAGGAAGATTGACTCGAAGAAGAAGCGCCGACATCCATCCAAACAC
CGCTCATGCGAGGATTAAAACCCTACCTATCTACTAGCACCGAGATCCGAGACACCAGAAATCCCCTCCCCGCCACCGGC
TGCCGGAGCGGCGGGAGGAGGGGAGGCAAATCCACAGGCTTGTCGGTGAAGATTGAGAGGAGGAAGCTTTTCCTCAGTCA
CCTTGTGAGAGGGAAAGAAAAGCACCTTTGATCTGATTTGTAAAAAAGGATCTCCTCATCAATCGGTCAACTGCATCGAA
AAACTTTTTTTAATACATGAAGATATTAAAAACAAGGGTGAAACATGAAGTTAAGTTTTAGAGGAGAAAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ATAGAGGCAATGATGCATTTTGCAAAGTGCAGTCTCTTCCAA------TTTTTTAAGGTGCCTGTCTCTGC
TGCAAACCTGC----GTCGTCACGAGGCTGGCGGACTCGTCGAGGAGGCAGG----GGGCGCGGGTGAGGGTCGAAAACG
ACACACCTCTTGGAAGGCAGCCCGGCTCCTTGTGACCGTTCGATCCGTCCAAGGGCTAGCTGCCTTTTGGCTTCATCGGA
GTGTCCTCC-----------GGCGGAGATCTATTTCTATCCCCCGGAACCCTCCGCCCCTTCCCCCCTAAATCTCTCCGC
CCCCTCCGCCGCCTCGCCACCCTCGCCTCAGCCTCACCCTCACCGCCGG------------------CCCCCAGCCCCTC
TCCCCAACCCCTGCCCGATGACGTCCCCGGCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAGCGCCGCCAGCGGCCGC
CGCGGCGCAGTCCCCGCCCCCGCGCATCGGCCTCGCCGGCCTCGCCACCATGGGCCAGAACCTCGCGCTCAACATCGCCG
AGAAGGGCTTCCCGATCTCCGTCTACAACCGCACCGCCGCCAAGGTCGACTCCACGCTCTCCCGCGCCGCCGCCGAGGGC
GCGCTCCCCGTGCTCGGCCACCGCGACCCGCGGGACTTCGTGCTCTCCCTCGCGCGCCCCCGCACCGTCGTGCTCCTCGT
CCAGGCCGGCCCCGCCGTCGACGCCACTATCGACGCCCTCTCGCCCTACCTCGACGCCGGCGACGCCATCGTCGACGGCG
GCAACGAGTGGTACCAGAACACGGAGCGCCGCATCGAGCAGGCCGCATCCCGGGGGATACTCTACCTCGGCATGGGCGTC
TCCGGCGGCGAGGAGGGCGCGCGGAACGGCCCCTCGCTCATGCCCGGCGGCGACTTCCAGGCCTACAGCAACATCAAGGA
CATCCTCGAGAAAGCCGCGGCTCAGACGGAGGACGGCCCGTGCGTCACGTTTGTCGGGCCCGGTGGCGCCGGCAACTTTG
TCAAGATGGTGCACAACGGGATCGAGTATGGTGATATGCAGCTCATCGCCGAAGCCTATGACGTGCTCCACCGTGTTGGC
GGCCTCTCAAATTCGGAGATAGCCGATGTGTTTGCTGAGTGGAACAAGGGAGAGCTGGAGAGCTTCTTGGTGGAGATTAC
TGCAGACATATTCACTGTGGCTGATCCACTGGAAGGGAGCACCGGTGGGGCGCTGGTTGACAAGATTCTTGACAAGACCG
GGATGAAGGGGACCGGGAAGTGGACGGTGCAGCAGGCGGCGGAGCTTGCAGTCGCTGCGCCCACGATTGCAGCATCGCTG
GATGGGAGGTACTTGTCGGGGCTCAAGGATGAGCGAGTTGCAGCCGCAAGTGTGCTAGAGGAAGAGGGGATGCCAGTTGG
GCTTCTGGAGAAGATTAATGTCGATAAGAAGGTGCTGGTGGACAGGGTGAGGCAGGCACTTTATTCGTCCAAGGTTTGCA
GCTACGCACAGGGGATGAATCTGCTAAGAGCCAAGAGTGTGGAGCAGGGCTGGAATCTTAACCTTGCCGAGCTTTCAAGG
ATTTGGAAGGGTGGATGCATTATTCGGGCAAGGTTTCTTGATAGGATTAAGAAGGCTTATGACAGGAACCCTGAGCTGGC
CAATTTGATTGTCGACAGGGAGTTCGCCAGGGAGATGGTGCAGAGGCAGGGCGCATGGCGGTGGGTTGTGGCCCGGGCAG
TAGAGGCTGGGATTAGCACCCCAGGGATGTCTGCGAGCCTTTCATACTTTGATACCTACAGGTGCAACCGGTTGCCAGCG
AATCTGATCCAAGCACAGAGGGACTTGTTTGGAGCACACACCTATGAGCGCATTGACCGCCCAGGTTCTTTCCACACCGA
GTGGACTAAGCTGGCAAGGGAGGGCAAGTGAATGACTTTGCAGCCACCTGAGGAATTTGGTGGTACCATATGTGGTCTCG
GTGATTC-GGGGTGATGTCTCTTCGTGGTTCTCTTTAATTTATCTATTGCTGTTTTTGCAATACGAGATCTGAATTGTGT
ACCTTGAATAATGTAGTGTCTTGTGCTGTATGCACGTGAAGAACATTTGTGTAGCTTCAGG--TTCTATGGTTTAGATAC
ACCCAGTTTTATCCACTTATAAATTTGGAGCA-ACGGTTTTAATGCCTCGCATCCCAATGTTGCCCTTGAAGTGTGATTT
CGAATATGTCAATATGGTGGTAACTGGTAAGAGTAGTGACTGATGTTTCTCTACTTCTATGAATCTATTTTAGGTTGTTC
AGTGTTGCAAGGTAGTATTTCATTTCACCTGCTGTGCTGTCACCCTACTGTT-------GGAGCTATCTCTGGTCCTGTG
ATGAGTTTCATCTTGTTATGGGCGGGTCCATGCCATATGACATATATTTGAAAATATC--AAAGATGGAAAATCTGTTTG
ATTGTA----GATACAAAAGGAAATCATTATTAATGGGCCTGCTCATTCTCAATGAAACGC-CTTCTTGTTTGTTGGATA
GCAAGCCTGGACAAATTTTTGCAAATGATTGTTCTT-TTGTTATTGTTGCATCTTTGTGTTCCAGGAGAACACTAAATTA
TGTCAGAGAGAAAAGAGGTACCTGTGTAGTTTTATGAATTTATACAGTACTTCTCTTCAACTGGTCAAAACTCAAAACCT
TTGATAAGATATGCAACTAATTTTTCAGATTAATCGTTTCTTCAAGTTCATCATGTTTCACTTCT---T---ACATGTTG
AAGTGGCAAGAATATTTCCCAAATGAAGAATTACTGTGGCCACCACACTTC-----------------------------
--------------------------------------------------------------------------------
----------------------
>chr1B_547
AATGGGACG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AAAACTTTTTTTTAACATGAAGCTATTAAAAAGAAGGGTGAAACATGAAGTTAAGTTTTAGAGGAAAAAATAGTGGACAC
TATTCCCATCAGCCGGCGGATGCTACTCTTGCGTCCATCTTCTCCATCGGTAGACACGTGTCCTCATGGTTCGAAGCAGC
ACGTGCCCCTTGTCTAGAAACATCGCGAGCATTACATCTCCTTTCCCGCCTCTTTATGCCTGCTTACAGCCATGGCCATC
ACTCGAGTGCCCACGCCCGAGCATCGCTCTAGGTACCATCGGCCCAGCTGCGCCGCTCCAGCCTCCCGTCTCGCCCTCCG
CAGTCGCTCCGGCCGGCGATGCATTTTACACTTTTCGCAACAAGAACTTTGTTGCAAAAGTCCTCCCGCAACATCATCTT
TGTTGCATAAATTTCTTGATTCACACCGCACACGACGTCATAACTTTCGGTGAAAAATCTCCGCAACATCATTAATGCAA
GTCCTCCAGCAACACCAACTATGTTTCAAAATGTAAAGGCGAAAAAAAATCTCGCAACACTGCCTATGTTGCAAAATTCC
TCCCGCAACATCATCTATGTTGCAAAAAAGGTGCAGACGAAAATTAAAAAAATTCAGGCAAAAAATAACGCTTTCAGTGT
TTTTGCAACAAAGCTGCTGCTGCAGAGCGAGCTACATCGGGGAGATCTGACGGCTATATGTGGCTCAATCCAATGGCGCG
GGAGGAGGTTGATGTTCTCAATTAAACCGGGGCAAACGTCGGGCCGGGCCGGGTTTCGGGCCGGGCTTGTAAAAGCCCGA
CCTTCATTTCTCAAGCCCGAGCCCAGCCCGAAGCCTGAAATACTCCCTGATTTCAAACCCGAGCCCGGCCCGAAATCAAG
CTCGAAGCCCGAAAGCCCGGCCCGAACGCCATTTTTTAATACATGGACGTGAAAGCCTGGCCCGAAGCCCGAAAGCCCGG
CCAAAAATAGAAAAAGAGAAGCCCGAGCCCGGCCTGAACTACATTTCGGGCTGCAAAACAAAGCCCGAGCCCGGCCCAGG
TTTTTCGGGCCAGGTCGTCGGGCCGGGCTGCCCATGCCCGGGTTTATTCTCAATTAATTTTCCTGGCAGACGCGTAGCGT
TCCCAAAAAATAGAGTCAAGGGTGCATTTTGCAAAGTGCAGTCTCTTCCATTTTCTTAAC----------GTGTCTCTGC
TGCAA-CCTGCGTGGGTCGTCACGAGGCTGGCGGAGTCGTCGAGGAGGCAAG----GGGTGAGGGTC-GGGTCGAAAACG
ACACACCTCTTGGAAGGC----------CTTGTGACCGTTCGATCCGTCCAAGGGCTAGCTGCCTTTTGGCTCCATCGGA
GTGTCCTCCAACGC------GGCGGAGATCTATTTCTATCCCCCGGAACCCTCCGCCCCTT-CCCCCCAAATCT------
---CTCCGCCGCCTCGCCACCCTCATCTCAGCCTCAGCCTCACCCTCACCCTCACCCTCGCCGCCGACCCCCAGCCCCTC
TCCCCAACCCCTGCCCGATGACGTCCCCGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCCAGCGCCGCCAGCGGCCGC
CGCGGCGCAGTCCCCGCCCCCGCGCATCGGCCTCGCCGGCCTCGCCACCATGGGCCAGAACCTCGCGCTCAACATCGCCG
AGAAGGGCTTCCCGATCTCCGTCTACAACCGCACCGCTGCCAAGGTCGACTCCACGCTCTCCCGCGCCGCCGCCGAGGGC
GCGCTCCCGGTCCTCGGCCACCGCGACCCGCGCGACTTCGTGCTCTCCCTCGCGCGCCCCCGCACCGTGGTGCTCCTCGT
CCAGGCCGGCCCCGCCGTCGACGCCACCATCGACGCCCTCTCGCCCTACCTCGACGCCGGCGACGCCATCGTCGACGGCG
GCAACGAGTGGTACCAGAACACGGAGCGCCGCATCGAGCAGGCCGCATCCCGGGGCATACTCTACCTCGGCATGGGCGTC
TCCGGCGGCGAGGAGGGCGCGCGGAACGGCCCCTCGCTCATGCCTGGCGGCGACTTCCAGGCCTACAGCAACATCAAGGA
CATCCTGGAGAAGGCCGCGGCTCAGACGGAGGACGGCCCGTGCGTCACGTTTGTCGGGCCCGGTGGTGCCGGCAACTTCG
TCAAGATGGTGCACAACGGGATCGAGTACGGTGATATGCAGCTCATCGCCGAAGCCTATGATGTGCTCCACCGTGTTGGT
GGCCTCTCAAACTCGGAGATAGCCGATGTGTTTGCTGAGTGGAACAAGGGAGAGCTGGAGAGCTTCTTGGTTGAGATTAC
TGCAGATATATTCACAGTGGCTGATCCACTGGAGGGGAGCACCAGTGGGGCGCTGGTTGACAAGATTCTTGACAAGACCG
GGATGAAGGGGACCGGGAAGTGGACGGTGCAGCAGGCGGCGGAGCTTGCAGTCGCTGCACCCACCATTGCAGCATCACTG
GATGGGAGGTACTTGTCGGGGCTCAAGGATGAGCGAGTTGCAGCCGCAAGTGTGCTAGAGGAAGAGGGGATGCCAGTTGG
GCTTCTGGAGAAGATTAATGTCGATAAGAAGGTGCTGGTGGACAGGGTGAGGCAGGCACTTTATTCGTCGAAGGTTTGCA
GCTACGCACAGGGGATGAATCTGCTAAGAGCCAAGAGTGTGGAGCAGGGCTGGAATCTTAACCTTGCCGAGCTTTCAAGG
ATTTGGAAGGGTGGATGCATTATTCGGGCAAGGTTTCTTGATAGGATTAAGAAGGCTTATGACAGGAACCCTGAGCTGGC
CAATTTGATTGTCGACAGGGAGTTCGCCAGGGAGATGGTGCAGAGACAGGGCGCATGGCGGTGGGTTGTGGCCCGGGCAG
TAGAGGCCGGCATCAGCACTCCAGGGATGTCTGCGAGCCTTTCATATTTTGATACCTACAGGTGCAACCGGTTGCCAGCG
AATCTGATCCAAGCACAGAGGGACTTGTTTGGGGCACACACCTATGAGCGCATTGACCGCCCAGGTTCTTTCCACACTGA
GTGGACTAAGCTGGCGAGGGAGGGCAAGTGAATGACTTTGCAGCCACCTGAGGAATTCGGTGGTACCATATGTGGTCTTG
GTGACTC-GGGGTGATATCTCTTCGTGGTTCTCTTTAATTTATCTATTGCTGTTTTTGCAATACGAGATCTGAATTGTGT
ACCTTGAATAATGCAGTGTCTTGTGCTGTATGCACCTGAAGAACATTTGTGTAGCTTCAGGTTTTCTATGGTTTAGATAC
ACCCAGTTTTATCCACTCATAAGTTCGGAACTCATGGTTTTAATACCTCACATCCCAATGTTGCCTTGGAATTGTGATTT
CAAAGATGTCAATATGGTGGTAA-------GAGTGGTGACTGATGTTTCTCTACTTCCATGAATCTATTTGAGGTTGTCT
AGTGTTGTAAGA---TATTTCATTTCACCTGCTGTGCTGTCATCCTACTGTGGATTGTGGAAGATAGCTCTGGTCCTGGG
GAGAATATCATCTTGTTATGGGCGTGGCCATGCCATACGGCATGTATTCAAAAATATATTAAAGATGGAAGTTCTGTTTG
ATTGTAGAATGATACAAAAGGAAATCATAATTAATGG-CCTGCTCATTCTCAGTG-AAATGTTTTCATGTTTGTTCGATA
GCAAACCTGGACAT-TTGTTGCAAATGATCATTTTTCTTGTTATTGTTTCAGCTTTGTGTTCCAGGAGAACACTGAATTA
TATCAGAGAGGTAAGAGGTACTTGTTTAGTTTTAGGAATTTATGCAGTACGTTT-TTCAACCGGTCAAACTC--AAACCT
TTGATAAGATATGTAACTTCTTTTCCAGATTAATCCTTTCTTCATGTTGATCATGTTTCACTTCTTTTT---ACATGATG
TAGTGGAAAGAATATTTCCCAAC-GAAGAGTTAGTGCAGACACCATACTT------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS----------SS-S---S------SS--------S-S----S----S-------
---------S-----------------S-S----SS-S----S------S--S---------------------------
---S-S--------S----------------------SSSSSSSSSSS----------------S---S-----------
S----------S---SS-----------------------S------------S----S---S---S-SSSSSSSS----
--------------------------------------------------------------------------------
-----S------------S-------------S-------------------------------S--------S--SS-S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--S-----S---S-------SS-----SS-------S----------
S------------------------S--------------------------SSSS------------------------
--------------------------------------------------------------------------------
--------------SSSSSS------------------------------------------------------------
------------------------------------------------------------------S-------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------------S--S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----S---------------------------
--------------------------------------------------------------------------------
------S--------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----S--S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--------------------S
--------------------------------------------------------------------------------
-----S-----------------------------------S--------------------------------------
-------S----------------------S-------------------------------------------------
----------------S---------------------------------------------------------------
---------------S-------------------------S-------------------------------S------
-S------------------S-----------------------------------------------------------
----------------S--------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------S----------------------------------
-----S-------------------------------------------S---------------------S--------
------------------------------------------------------S-------------------------
-----------------------------------------S---------------------------SSS--------
----S---------------------------S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_1802
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GAGGCAAGGCTAAATGCAGC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_3236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGAGTGGAACAAGGGAGAGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_1815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATGCAGCCTCCTCCATTTCA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_3569
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CAGGCAAGCGCTTTATTCGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_3236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GAGATAGCCGATGTGTTTGCC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_5014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------ATGAGCTGAGTCGTTGCACA-------
----------------------
