>input_sequence_49658
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------ATGCTCTGTTCTTTCTTGCTTTCAGAATCTCCG
TTCAACAGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGATCAGAAAAGCAAA
GGATGATGCTATAAGCCCATCCGATAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTA
AAATATAGCCATAAATAATTTATTTTATATTTGACTGGGCGGTTGCTCATGGTTTAAGTTATGGTAGAAG-TTTTTTCTC
TCAAGTGCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCTGAATATTACGGCAATGCACTTTTCTATGCAATACAGTA
AACGGATCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTCGTACACTTTTCTATGTGCAGTTCATTATGAAGG
GACACTTGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTTCATTTGAAGTTGGCCAGGGAG
CTGTCATTAAAGCATGGGATATAGCCTTAAGAACTATGAAAGTATGTGAACGTTTATAATTGCTTGCTCAAATTGATAGC
CTCGAAAGTTTCTTTCTAATATGGCACGGTGTATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCC
GGAATATGCGTATGGAAGTCCAGGCTCGCCGCCAGAGATACCAGCGAAGTTTGTTTGCCATTTCACCTCTTGATTGACTG
AAGTTGTAAGCATCCCGAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGT
GGAATTAGTTGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACA
TCTCCAAGTGTTTCCTCTTTTATATTTAAC---GCATCAAGTACCCAATAATCAGATGGTGGTCGACAAAATCCTCAATG
AAGCTGATCTGTGGAGGTTGGCACTTGGCAGGGAGCTAAGGAGTTCAGAACTCGGCCTCTGAATGCTCGTCCACCCCATA
ACATCTCTAGACAACCATAGC-TTTTTTAATCCTCCATTTTCAAGTGTTTTTGCCCTTTTTTTTCTGTTTCTATGGGGTT
AGTGGAGCTTTTGCTGTGTTTTTGGTCAGTAGTACAGTTAAGCCAGTTTTGGCATTTTTTTTCTAATACAGAAGTTAGTA
CCCAATAATTATGTTAAACAGCGTGGGACATCATATTGGAATT-------------------------------------
--------------------CTTGAGAGCTACGTATCATGTCTATTATCCATTTTGTAGCATCCTTGTGATTGTTAAAAA
G-TACATGATTTTTTATGCATAAATTTTGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCTGCTGCCACCAAAGAGGAAG
AGAAGAAGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGA
AAAGGAAAGGGCAAATAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr1D_1_TraesCS1D01G282500
ACTAGAAAATTTTGCATTATTTTTTAATAAAGGAACAAAGGTTTTTTAATGCCCACAAAAAGTTTTTTTATTCTTTTTCT
TTGGAAGGAGAATACTACAGTCCGTAGTAGTGGCGACCGAATCGAATCAA-----CGGAGGGCATCCTCCGGTAAAAATC
ACGCGAAACCATCCTCTGATTCCCCCTCCCCCTCGTCCCATCCAGATCTGTCTATCATCGTCGCTCCCTCCACTCTGAAT
TCCCCTCCCCTTCTCTCGGTGAAGGTACGTGC----CGCCCGCCCGCCCGCATCCATCTTCCTCCTCTCCGCTCACCCCT
TCTAATCCCAATACC-CACTCATCCGTTCAGCAGGTCCTCACCGGCGCCCCCGCTGCCACGGCCCTCTCTCCAAATCGTC
GCCGACCCGAGGTAAATTCTACCTCCCTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTT
AGGTCTCGAATAGTTTAACACAGACTCAGTTCAGGTTGTGCCATGCGGTAGTTACTTGAAGAAGATTGCAGTTGCCTCTA
GGTTCGGCTTTAAGCCTGCAGGTTGTTGATCTGGGAGGGGCAGCACAAGT-AACTTTTATAGGTTACATAAATGCATACC
GGGAGAAGATCTCCTAAGGACATGCTAAGTAGGGCCGCGCTACCACTTATTGGAATTGTTTTG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGTAACTCAGCTGTTGGAATTGG
GTTATTTGTGAGACTGGTACTCTGTGTTTTACATTTTTGTTTTGATGA-GGAAAACGGTTATAGAGTCTACTTGAGTGTT
GTTCGATATACCTTCAATTCATTGACGATTGTCTCTGGGGCCCTTTGTCGCACTGCCAACCCGAAGTCTGAAACCTTG-A
TTTTAAAATTGGCTTCAAATTTAATTGCAAGAATTTAGACAAGTGCAGGAACTGACTATGTTATGCATTTTCAAGTGCTT
GTGCCCATTAGTTTGATCGAATTTGGTTTTGCTAGAGCACTCTAATAATGCTCTGTTCTTTCTTGCTTTCAGAATCTCCG
TTCAACAGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGATCAGAAAAGCAAA
GGATGATGCTATAAGCCCATCCGATAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTA
AAATATAGCCATAAATAATTTATTTTATATTTGACTGGGCGGTTGCTCATGGTTTAAGTTATGGTAGAAG-TTTTTTCTC
TCAAGTGCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCTGAATATTACGGCAATGCACTTTTCTATGCAATACAGTA
AACGGATCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTCGTACACTTTTCTATGTGCAGTTCATTATGAAGG
GACACTTGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTTCATTTGAAGTTGGCCAGGGAG
CTGTCATTAAAGCATGGGATATAGCCTTAAGAACTATGAAAGTATGTGAACGTTTATAATTGCTTGCTCAAATTGATAGC
CTCGAAAGTTTCTTTCTAATATGGCACGGTGTATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCC
GGAATATGCGTATGGAAGTCCAGGCTCGCCGCCAGAGATACCAGCGAAGTTTGTTTGCCATTTCACCTCTTGATTGACTG
AAGTTGTAAGCATCCCGAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGT
GGAATTAGTTGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACA
TCTCCAAGTGTTTCCTCTTTTATATTTAAC---GCATCAAGTACCCAATAATCAGATGGTGGTCGACAAAATCCTCAATG
AAGCTGATCTGTGGAGGTTGGCACTTGGCAGGGAGCTAAGGAGTTCAGAACTCGGCCTCTGAATGCTCGTCCACCCCATA
ACATCTCTAGACAACCATAGC-TTTTTTAATCCTCCATTTTCAAGTGTTTTTGCCCTTTTTTTTCTGTTTCTATGGGGTT
AGTGGAGCTTTTGCTGTGTTTTTGGTCAGTAGTACAGTTAAGCCAGTTTTGGCATTTTTTTTCTAATACAGAAGTTAGTA
CCCAATAATTATGTTAAACAGCGTGGGACATCATATTGGAATT-------------------------------------
--------------------CTTGAGAGCTACGTATCATGTCTATTATCCATTTTGTAGCATCCTTGTGATTGTTAAAAA
G-TACATGATTTTTTATGCATAAATTTTGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCTGCTGCCACCAAAGAGGAAG
AGAAGAAGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGA
AAAGGAAAGGGCAAATAGATTACTCCCAACTGATGTATTAGTAGTTGCATTTGCTGCTGAGTGCCGACTGTTGTAACCTA
---------------------------------------------------G-------AAAATAATCTGCACGAAGCAT
CAGACTGCAAGAAGATTGCTTATTGGCTACTGTGCTTTGGGGGATGCTACATGGCCTATGTTGCCCAGCACCAGCCGTAC
TGAAAACACTAAATAATTACAGCAATCTTCTCCTGGCTTTTACACAAGATATGAAATGTCAACTCTTCTGACCGAGTCAT
TTTTACTGCACAGCAATGACATTTCCGTGTCT--GATAATGTAATTGCAGATG----TATACAGCACATGTGACATTTAC
TTCTGAACAGACGTGCA------TCTCAGCAAAATTTGCTTTGATATGCTTTTGCTTCCGAACACAGCATGTACATTTAC
TTTACAACACGAAGGGTTAAGCTTTTTGTGTACAAACACAGCTGAGACCGGATTATGAGCTGAGGCAGCAGTCATCTTCC
TC--ATACTGGAAATACGACCATCTCAAAACGAAACCCTGGAGAGGTGGAAATACTTCTGGATCCGGAGGCATCTTTTCT
CATATCTTACATTTGAGGGTTTTAAGAAGTATCCGCTAACCTGTTACGATCCGAAATGGCTCAGAAATGGTATACTTTGG
GCACTTGAATAGGAATATCAATCCCCTTTCTCATATTAGCAA-CTATGTACCTCAATGTGAATGTAATGCTATCTTTTGT
AAATCACATGGCGGTGTAGATGGTAAAATATCATATGATGCACGGAACCGTAGGCCATTGCCTGTATTGACTGATACTGG
GCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGGATAAACAATCGGAAACATCAGAACATATAACACACGATGCT
TTCCAGGGTTAAGAAAGCAACCAAGCAAACATGATTATAGTTCGGGAAGCGGCACCGCGCAAGCCCGCATCATGT----A
ACTGGCACCACACAGGCCTGACAGCAGACCGCCTACATCCTAAGCGTAGTGCTAC
>chr1B_1
ACTAAAGATTTTACATTA--TTTTTAATAAAGAAACAAAGGTTTTTTAATGCCCACAATTTT----------TTTTTTCT
TTGGAAGGAGAATATTACAGTCCGTAGTAGTGACGACCGAATCGAATCGAATCGACGAAGGGCATCCTCCGGTAAAAATC
ACGCGAAACCATCCTCTGATTCCCCCTTCCCCTCGTCCCATCCAGATCTGTCTATCATCGTCGCTCCCTCCACTCTGAAT
TCCCCTCCCCTTCTCTCGGTGAAGGTACGTGC----CGCCCGC--------ATCCATCTCCCTCCTCTCGGCTCACCC-T
TCTAATCCCAACACCACACCCATCCGTTCAGCAGGTCCTCACCGGCGCCCCCGCTGCCACGGCTCTCTCTCCAAATCGTC
GCCGATCCGAGGTAAATTCTACTTCCTTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTT
AGGTCTCCAATACTTGAGCACAGTTTCAGTTCAGGTTGTGCCATGCGGTAGTG-CTTGAGGAAGATTGCAGTTGC-TCTA
GGTTCGGCTTTAAGCCTGTAGGTTGTTGATCTGGGAGGGGCAACACAATT-AACTTT--TAGGTTACATAAATGCATACT
GGGAGAAGATCT--------------AAGTAGGGCCGCCCTATCACCTATTGGAATTGTTTTG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGTAACTCAGCTGTTGGAATTGG
GTTATTTGTGAGACTGGTA--CTGTGTTTTTCATTTTTGTTTTGATGA-GAAAAACGGTTATAGAGTCTACTTGAGTATT
C----------------------------------------CTTCGGTCGCACTGCCTACCCTAAGGCTGAAACCTTTTA
TTTTAAAACTGGCTTCAAATTTAATTGAAAGAATTTAGATAAGTGAAGGAACTGACTAT-----GCATTTTCAAGTGCTT
GTACCCACTAGTTTGATCAAATTTGGTTTTGCTAGAGCACTCTAATAATGCCCTGTTCTTTCTTGCTTTCAGAATTTCCA
TTCAACAGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGGTCAGAAAAGCAAA
AGATGATGCTATAAGCCCATCTGACAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTA
AAACATAGCCATAAATAATTTATTTTCTATTTGGCTGGGCGGTTGCTCAGGGTTTAAGTTATGGTACAAGTTTTTTTCTC
TCAAGTGCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCCGAATCTTATGGCAATGCACTTTTCTATGCAATACAGTA
AACGTTTCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTTATAC------CTATTTGCAGTTCATTATGAAGG
GACACTTGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTACATTTGAAGTTGGCCAGGGAG
CTGTCATTAAAGCATGGGACATAGCCTTAAGAACTATGAAAGTATGTGAACGCTTATAATTGCTTGCTCACTTTGATAGC
CTCGAAAGTTTCTTTCTAATATGGCATGGTGCATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCC
GGAATATGCGTATGGAAGTCCAGGCTCGCCACCAGAGATACCAGCCAAGTTTGTTTGCCATTTCACCTCTTGATTGACTG
AAGTTGTAAGCATCCCCAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGT
GGAATTAGTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACA
TCTCCAAGTGTTTCCTCTTTTATATTTATTAATGCATCAAGTACCCAATAATCAGACGGTGGTCAACAAAATACTCAATG
AAGCTGATCTGTGGAGGTTGGCAGTTGGCAGGGAGCTAAGGAATTGAGAACTCTGCCTCTGAATGCTCGTCCACCCCATA
ACATCTCTAG----CCATAGC-TTTTTTAATCCTCCATTTTTAAGAGTTTTTGTCCTTTTTTTTCTGTTTCATGGGGA-T
GGTGGAGCTTTTGCTGTTTTTTTGGTCAGTAGTACTGTTAAGCCAGTTTTGGCAC-TTTTTTCTAATACAAAAATTAGTA
CCCAATAATCATGTTAAACAGCATTGGACATCATATTGGAATTAAATAATAGAT--------------------------
---------------------TTGAGAACTACGTATCATGCCTATTATCCATTTTGTAGTACCCTTGTGATTGTTAAAAA
AATACATGATTTTTGATACATAAATTTCGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCAGCTGCCACCAAAGAGGAAG
AGAAGAAGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGA
AAAGGAAAGGGCAAATAGATTACTCCCAACTGATGTATTAGTAGTTGCATTTGCTGCTGAGTGCCGACTGTTGTAACCTA
CTCCCTCCGTCGCATAAAAGAAAACATCTTACATTGTGGGACGAAGTAGTACGGAGTATAAATTAATCTGCACAAAGCAT
CAGACTGCGAGAAGATTGCTTGTTGGCTACTGTGCTTTGGGGGATGC-------CGTATGCTGCCCAGCACCAGCCTTAC
TGAAAACATTAAATAATCACAGCAAACTTCTCTTGGTTTTTACACAAGATGTGAAATGTCACCACTTCTGA-CGAGTCAT
TTTTACTGCACAGCAATGACATTTCCATGTCTGAGATAATGTAATTGCAGATGAGTGTATACAGCAAATGTGGCATTTAC
TTCTGAACAGGCGTGCATCTCAGTCTCTGCAAAATTTGCTTTGATATGCTTTTGCTTCCGAACACAGCATGTACATTCAC
TTTACAACAC-AAGGGTTAAACTTTTTGTGTACAAACACAGCTGAGACCGGATTATGAGCTGAGGCAGCAGTCATCTTCC
TCGTACC--GGAAATACGACCATCTCAAAACGGAACCCTGGAGAGGTGTAAATACTTCTGGATCCGCATGTATCTTTTCT
CATATCTTACATTTGAGGGTTTTAAGAAGTATCCGCTAACCTGTTACAATCCGAAATGGCTCAGAAATTGTACACTTTGG
GCACTTGAATAGGAATATCAATCCCCTTTTTCATATTAGCAA-CTATGTACCTCAATGTGAATGTAATGCTATCTTTTGT
AAATCACATGGCGGTGTAGATGGTAAAATATCATAGGATGCACGGAACCGTAGGCCACTGCCTGTATTGACTGATACTGG
GCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGGATAAACAATCAGAAACATCAGAACATATAACACACGATGCT
TTCGAGGGTTAAGAAAGCAACCAAGCAAACACGATTATAGTTCGGGAAGCGGCACCGCGCAAGCCCGCATCATGTGTTAA
ACTGGCGCCACACAGGCCTGACAGCAGACCGCCTACATCCTAAGCGTAGTGCTA-
>chr1A_66
TT--------------------------------------------------------TTTC----------CTTTTTCT
TTGGAAACGAGAATATACAGTCCGTGGTAGTGGCGACCGAATCGAATCGA-----CGGAGGGCATCC-----------TC
ACGCGAAACCATCCTCTGATTCCCCCT-CCCCTCGTCCCATCCAGATCTTTCTGTCATCGTTTCTCCCCCCACTCCGAA-
TCCCTCCCTCCTCTCTCTGTGAAGGTACGTGCCGCACGCCCGC--------ATCCATCTTCCTCCTCTCCGCACACCCCT
TCTAATCCCAACACCACACCCATCCGCTCAGCAGGTCCTCACCGACGTGCCCGCCGCCACGGCCCTCCCTCCAAATCGTC
GCCGACCCGAGGTAAATTCTACCTCCTTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTT
AGGTCTCGAATAGTTGAACACAGTCTCAGTTCAGGTTGTGCCATGCGGTAGTG-CTTGAGGAAGATTGCAGTTGCCTCTA
GGTTCGGCTTTAAGCCTGTAGGCTGTTGATCTGGGAGGGGGGCAACACAAAAACTTT--TAGGTTACATAAATGCGTGCT
GGGAGAAGATCTCTTAAGGACATGCTAAGTAGGGCCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACATTGTAACTCAGTTGTTGGAATTGG
GTTATTTGTGAGACTGGCA--CTGTATTTTACATTTTTGTTTTGATGAGGAAAAACGGTTATAGAGTCTACTTGAGTGTT
GTTCGGTACACCTTCAATTCACTGACGATTGTCTCTTGGGTCTTTTGTCGCGCTGCCAACCCTATGTCTGAAACCTTG-A
TTTTAAAACTAGCTTCAAATTTAATTGAAAGAATTTAGACAAGTGAAGGGGCTGACTATGTTATGCATTTTCAAGTGCTT
GTGCCCATTAGTTTGACCAAATTTGGTTTTGCTAGAGCACTCTAATAATGCCCTGTTCTTTCTTGCTTTCAGAATCTCCG
TTCAACAGCAAGGTCATGGCAGAAACCATAGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGGTCAGAAAAGCAAA
GGATGATGCTATAAGCCCATCTGATAGCCTTCCATTGGTTGATGGTACTGCAGTCAATCCATAGCCC-----TCTGAGTA
AAACATAGCCTC-AATAATTTATTTTCTATTTGGCTGGGCGGTTGCTCAGGGTTTAAGTTATGGTACAAG-TTTTTTACC
TCAAGTGCTTCCAATGTTTTTCCATTCAGCTACTTTGCCCCCGAATCTTACGGCAATGCACTTTTCTATGCAATACAGTA
AACGTTTCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTTATAC------CTATCTGCAGTTCATTATGAAGG
GACACTTGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTTCATTTGAAGTTGGCCAGGGAG
CTGTCATTAAAGCATGGGATATAGCCTTAAGAACTATGAAAGTATGTGAACGTTTATAATTGCTTGCTCACTTCGATAGC
CTCGAAAGTTTCTTTCTAATATGGCATGGTGTATCACGCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCC
GGAATATGCGTATGGAAGTCCAGGCTCGCCGCCAGAGATACCAGCGAAGTTTGTTTGCCATTTCACCTCTTGATTGACTG
AAGTTGTAAGCATCCCCAGGCCAGAAGTTTCTGTAACAACGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGT
GGAATTACTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACA
TCTCCAAGTGTTTCCTCTTTTATATTTAAC---GCATCAAGTACCCAATAATCAGACGATGGTCGACAAAATCCTCACTG
AAGCTGATCTGTAGAGGTTGGCACTTGGCAGGGAGCTAAGGAGTTGAGAACTCTGCCTCTGAATGCTCGTCCACCCCATA
ACATCTCTAGACAACCATAGCTTTGTTTAATCCTCCATTTTTAAGAGTTTTGTCC--TTTTTTTCTGTTTCTATGGGG-T
AGTGGAGCTTTTGCTGTGTTTTTGGTCAGTAGTACAGTTAAGCCAGTTTTGGCA-TTTTTTTCTAATACAGAAGTTAGTA
CCCAATAATCATGTTAAACAGCATGGGACATCATATTGGAATTACATAATATAGCATATAGCCTAGCTAATATTCTTGTT
TACGCGATTTCTTGAGAACACTCGAGAGTTACGTGTCATGTCTATTATCCATTTTGTAATACCCTTGTGATTGTTAGAAA
G-TACATGATTTTTGATACATAAATTTCGATAGGGAGCTTAAGAAACAGCGGGAGCTGTCTGCCGCCACCAAAGAGGAAG
AGAAGAAGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGA
AAAGGAAAGGGCAAATAGATTACTCCCAACTGATGTATTAGTCGTTGCATTTGCTGCTGAGTGCT-ACTGTTGTAACCTA
CTCCCTCCGTCTCATCAAA--AAACATTTTACATTATGGGATGTAGTAGTAG-------AAAATAATCTGCACAAAGCAT
AGATTGCCTGTTGC----CTTGTTGGCTACTGTGCTTCGGGGGAG-----ATGGCGTATGTTGCCCAGCACCAGCCTTAC
TGAAAACATTAAATAATCACAGCAATCTTCTCTTGG-------------------------------------------T
TTTTACTGCGCAGCAATGACATTTCCATGTCT--GATAATGTAATTGCAGATG----TATACAGCACATGTGACATTTAC
TTCTGAACAGATGTGCA------TCTCAGCAAAATTTGCTTTGATGTGCTTTCGCTTCCGAACACAGCATGTACATTTAC
TTTACAACAT-AAGGGTTAGACTTTTTGTGTACAAACACAGCC-------GATTATGAGCTGAGGCAGCAGTCATCTTCC
TC--ACC--AGAAATACGACCATCTCAAAACAAAACCCTGGAGAGGAAGAAATACTTCTGGATCCGCAGGTATCCTTTCT
CATATCTTAAATTTGAGGGTTTTAAGAAGTATCCAG------------------AATGGCTCAGAAATGGTACACTTTGG
GCACTTGAATAGGAATATCAATCCCCTTTCTCATATTAGCAACCTATGTACCTCAATGTGAATGTAATGCTATCTTTTGT
AAATCACATGGTGGTGTAGATGGTAAAATATCATACGATGCACGGAACCGTAGGCCATTGCCTGTATTGACTGATACTGG
GCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGGATAAACAATCGGAAACATCAGAACATATAACACACGATGCT
TTCCAGGGTTAAGAAAGCAAGCAAGCAAACATGATTATAGTTCGGGAAGCGGCACCACGCAAGCCCACATCATGTGTTAA
ACTGGCGCCACACAGGCCTGACAGCAGACCGCCTACATC----------------
>SNPs
----S-S-S---SSSS-SSS------------S-------------------------SSSSSSSSSSSSSS--------
--------------S---------------------------------S-------------------------------
---------------------------S----------------------------------------------------
-------------------------------------------SSSSSSSS-----------------------------
-----------S-------S------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------S-------S----------------------------SS-----S--------------------
------------------S-----------------------S-----S--------SS--------------------S
-------------S----------------------------S---S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SS-----------------------------S-----------------------------
-----S--S------------S--------------S---S-S-------------------S-----------------
--------S------------------S-----------------S----------------------------------
------------------S--------------------------------S----------------------------
------------------------------------------------------------------S-------------
---------------------S----------------------------------------------------------
---S----------------------S------S---------------S----------------S-------------
-----------------------------------------S----S---------------------------------
----SS----------------------------------------SS---SSSSSS----S------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SS--------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------------S-------S--------------------------
-----------------------------------------S---S--------------------------------S-
------------------------------------------------------S-------------------------
---------S------------S---------------------------------------------------------
-----------------------------------------------------------S-S------------------
--------------S--S---------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------S------------S-------------------------SSS-----S--------------------S---
--------S--------S--------------S---S-------------S----------S-S-------S--------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
----------S---------S-----------------------------------------------------------
-----SSSS---------------------------------------------------------S---S---------
-----------------------------------------------S------------------------S-------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------------------------------S
>forward_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTGACGATTGTCTCTGGGGC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2217
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGGTGGTCGACAAAATCCTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_1347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AGGCGTTCTTAAGACGGTGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2294
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGCCTCTGAATGCTCGTCC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_2286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGCAGGGAGCTAAGGAGTTC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_3636
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGATGCACGGAACCGTAGG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
