>input_sequence_49647
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GCTCGATCACTCGACCACTGCCCGAATGATCGATGGTCGACGCTCCGGACGGCGGTGTGCGCGCCAACGGCGAGGCCACC
TCCTCCCACTCATCTTCCGTCGAGGAGGATGCTCCCCCGTCCGTACTCTGCGGCTTCGTCAATGGTGGGCAGCCACTGTC
CCGGCGCCCCCTGGACGACGCGACACGCCCCGGTGAGACATGGTGGCCGCGCCAGACGACGGAGGACGCCGCGCACCGCC
TGGTGGCGTGGACAAGGGACAGCGGCTCCGTCCGCGCGCTGCTCGTCGTGTCGGTGAGCCTCCGCTTTCATAAACCCAAG
GACACCATGATTTGGATCGCGCCAGCAACTATAACATCATTGATCCCCCGCAGGTTGGATCCGTGGCCTCCGTACCGCTG
ACTGTCCTCCTGGTCTTCACGTTCCTCCTCGCGGCGGCGACGACGACCGCCATTGTCACTTCGATCGTCATGTCCCTGGC
TGCCGCCGGAGGATTCATGTCCGTGCTGTTCGCTTTCGCGGCGGCGATGTACATCGGGGCAGTGTCAGTCGCCGTCCTTG
TTATTTCAGCAATGACCGTGGCAACAGTCGTTGCCATCACGATTGCCAGTGGTACGTCTAACGTTTCATCACGATTGCCA
AGCCCCACTCTTCTTGCTTGCGATGCTTCTTGTTTTCAGCCT--------------------------------------
---------GTGTGCATCTTCAGTATCCACTACTACTTCCTCTGGTGTGGCACTATTTCGTACTAGTATTTACTCACATA
AAGCCCTGAAATTCTCATAAAAATCGGCAGCATCAGCTCTGGTTCACAATAGAACGGTAGTAGGAGTAATAAGTATGCAG
TAAGTACTTATGACGATTTCAGCTGAAGCTCCCAAAACTTGACGCAAAAGCTGATCAATATTCAGTAGGTTAAGCTGGTA
C------------------------------------------------------CTGGTAACAACGTGCTGTCATTTGG
TTGTTCATTCCGAAGATGTAATCAGATTCAGATGTTCACCTTCAAAAATGAAGTACTGGTTAAAAAATTTGTCTGAAAAA
CACGTTAGCAACAGGCACCAGGTTGTTCATAACTACTACTATTATGAAAGTACTCCCTCCGTCCGGAAATACTTGCCTTC
GAAATGATTGTATCTAGACTGGGATGTGGTAGGCATGAATATGGTTCTTCACATAGGAACATGAGGAAAGGGTAGTAGGG
CG-TTAACACAGTTTCGCCCATG-CCCGCAGATTTTTCTTTTTAG-ATGGTTTTTGAACTGAAACCAGAGCTCTTCGGAC
ATATTTTGCTTATTATCGATGACCTCGAAACATGTGCACAGCTAGCTGCAGAATGTTAGATTAACATATTATTTGCAGCA
ATCCATCTGACCATGCATACCATTGCAGGTTGGGTCGCGTTCTTCTGGATTCTTTGGTTTTCTGCTAAGAAATGCATGGG
CCTTGCTTAGTTCTAAGAGATCAGTAGGCACGACAAGCTAGCGATCAGATCTACGGCTGTCTGTATAAGATAGATAAAAT
CATTGCAATGAT--------------------------------------------------------------------
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-----------
>chr5B_1_TraesCS5B01G201800
GCGTCGAGATCTTCAAAACTAGATCTATATTGATAGATTTTTGACCGAAAAAAATCACGAAAAATCCGTGCCTCTCACGG
AAGGAAAAAATAGAAAAATGTTTTTTTTTCATTTCCGAGAGGCACGGACGTGCCTCTCACGGAACCAAAATAGTGTCTCT
CGCAGAAGCAAAACCGTGCCTCTCACAGAAGGAAAAAAAAGAGAAAACGTGT---TTTTTCATTTCTAAGTGGCATGGCT
GTACCTCTCGCGGAAGCAAAATTTTGCCTCTCACAGAAGGAAAAAATGTG--------------TTTTTTTCGTTTCTGA
GAGCCACGGCCGTGCCTCTTGCAGATGCAAAACCTTGCCTCTCACGAAAGCAAAACCATACCTCTCACGG----AAAAAA
ATAGGAAACACATTTTTTTTCGTTCCCGAAAGGTATGGGTGTGCCTCTTGCGGGAGCAAAATCGTGCCTCTCACAAAAGG
GAAAAAGAAAACATGATATTTTCGCTTCACGAGAGGCACGGCCGTGCCTCTAGCGGAAGCAAAAAAACACGATTTTTTTC
CT---GAGATGCACGGCCGTGCCTCTTGCGAAAGCAAAAGCATGCACTCGCGGAAGTAAAACCGTGCCTCTCGCAGAAGC
AAAAAAAAATTATTATTTTCTCAAAGAAAAGCTAAG----------AAAGACAGATGAAAATAAAAAAAAGTGAAAAAAT
CAGAAA-----AAAGTCTAAAAACCCGAAAACACGTGTAGAAAAATAAAAATAAAATAAAATCCAGAGAAAATGTCCAGA
GCGTGACACGTGACGGCGATTGATAGCGCGCTAAGTGGCGTACTCTCAGCCCACCCCGAAGTGATCGTTGGGAGGCTCCG
AAGGAGCAATCGTTGACTAGTTGCTCTCAAGCGAATGGCACGACGCCGTGCTCTCACGTGTGGGGCAACTGGGCCGGCCC
-AATAGTGAGCTCAGACAACACTGGCCCGTTGGATCGGTCTCAGTCCCAACAGCATTTTTCGCGCTAGCGTTTGACTCTC
GCTCGATCACTCGACCACTGCCCGAATGATCGATGGTCGACGCTCCGGACGGCGGTGTGCGCGCCAACGGCGAGGCCACC
TCCTCCCACTCATCTTCCGTCGAGGAGGATGCTCCCCCGTCCGTACTCTGCGGCTTCGTCAATGGTGGGCAGCCACTGTC
CCGGCGCCCCCTGGACGACGCGACACGCCCCGGTGAGACATGGTGGCCGCGCCAGACGACGGAGGACGCCGCGCACCGCC
TGGTGGCGTGGACAAGGGACAGCGGCTCCGTCCGCGCGCTGCTCGTCGTGTCGGTGAGCCTCCGCTTTCATAAACCCAAG
GACACCATGATTTGGATCGCGCCAGCAACTATAACATCATTGATCCCCCGCAGGTTGGATCCGTGGCCTCCGTACCGCTG
ACTGTCCTCCTGGTCTTCACGTTCCTCCTCGCGGCGGCGACGACGACCGCCATTGTCACTTCGATCGTCATGTCCCTGGC
TGCCGCCGGAGGATTCATGTCCGTGCTGTTCGCTTTCGCGGCGGCGATGTACATCGGGGCAGTGTCAGTCGCCGTCCTTG
TTATTTCAGCAATGACCGTGGCAACAGTCGTTGCCATCACGATTGCCAGTGGTACGTCTAACGTTTCATCACGATTGCCA
AGCCCCACTCTTCTTGCTTGCGATGCTTCTTGTTTTCAGCCT--------------------------------------
---------GTGTGCATCTTCAGTATCCACTACTACTTCCTCTGGTGTGGCACTATTTCGTACTAGTATTTACTCACATA
AAGCCCTGAAATTCTCATAAAAATCGGCAGCATCAGCTCTGGTTCACAATAGAACGGTAGTAGGAGTAATAAGTATGCAG
TAAGTACTTATGACGATTTCAGCTGAAGCTCCCAAAACTTGACGCAAAAGCTGATCAATATTCAGTAGGTTAAGCTGGTA
C------------------------------------------------------CTGGTAACAACGTGCTGTCATTTGG
TTGTTCATTCCGAAGATGTAATCAGATTCAGATGTTCACCTTCAAAAATGAAGTACTGGTTAAAAAATTTGTCTGAAAAA
CACGTTAGCAACAGGCACCAGGTTGTTCATAACTACTACTATTATGAAAGTACTCCCTCCGTCCGGAAATACTTGCCTTC
GAAATGATTGTATCTAGACTGGGATGTGGTAGGCATGAATATGGTTCTTCACATAGGAACATGAGGAAAGGGTAGTAGGG
CG-TTAACACAGTTTCGCCCATG-CCCGCAGATTTTTCTTTTTAG-ATGGTTTTTGAACTGAAACCAGAGCTCTTCGGAC
ATATTTTGCTTATTATCGATGACCTCGAAACATGTGCACAGCTAGCTGCAGAATGTTAGATTAACATATTATTTGCAGCA
ATCCATCTGACCATGCATACCATTGCAGGTTGGGTCGCGTTCTTCTGGATTCTTTGGTTTTCTGCTAAGAAATGCATGGG
CCTTGCTTAGTTCTAAGAGATCAGTAGGCACGACAAGCTAGCGATCAGATCTACGGCTGTCTGTATAAGATAGATAAAAT
CATTGCAATGATGAGAACCATGTGAAGCTTGGCATCTAGCTAGCT------ATGTGAATAATAGGTTGCTCTTTCTTTAC
AACAGCGTAGATCAGGGGTTCAGGTAAAGTTCGTCCTGGC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------ATATGGTTTTGTTGTTAGTTTCAGTCA--TGACCCAAATCTTGCTTCA
TAGGGTCGCCTGCCCTGAATGCAGAAACTTATTTCTTCCAC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TAAGGCGGAGTATATTCAACATGAGCTCTTTTATGGTACCCCCTCCCCCTCCCCG--CGGGTTG
CATTGGGGGCGCATGGGTAACATGTCACACCAAAAGTATACTACTGGATTCATACATACATATTAAGTTTT---------
--------------------------------------------------------------------------------
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----------------------------------------TAAATATATATTTTTGTCGCATATAATAT-----------
--------------------------------------------------------------------------------
-----------------------------------------ATATTTGGTTAGTCAGATTGCCGACCTACACACATACCC
TATGCCCCCTCCGGAGGTAGTACCCTGTAATGGATATAAGATAAGT-ATCCCTATGGTTTTGGGTATATGCCAGGGTCTC
CAAATCTTCAATCTCAAAGCATATACTTCACGATGAGATGGCTCCAGCAATAGCAGAATGTTGATCCTGAGAAAACATGG
ATAGACCTCACACTCCCAACTGAACATTGTGCAAACTCTTCTGCGTGTGTACCCTCCACAGCCCACTTCAATGTGCACCA
CGTTCTCTCGATAGTGTTTTTTTTCGATGCTCGATAGTATCAAGGCAAACCTTTCTGACGCCTCGACGACAAAAAACAAC
TGACGGTCGTAGGTTTGCATTGCGTTAGCCAAGGGACGCGGCGAGATATCCAGGGTCTAATACTGCAGCAGTGCAACACC
AGCAATCC-----AGAACACCATCGACACGTATAACTTTCATAATTTTTCACAATATATAGATGTAATCTTTATTAAGTT
CTGGAAAAAAGAAGGATCACATATACCAGGTCTGAAATTTTCATCT----------------------------------
--------------------------------------------------------------------------------
-GTATCAGAATTCAGTACCAGAGGTAAAACCTGGGTTTTTATTTTCTGCATATGAAACACCTACCCCTCTAAAAAAGAAA
CACCCAAGGAT
>chr5D_1
GCGTCGAGATCTTCAAA-CTAGAACCCTGTTGATAGATTTTGA--CGAAAAAAATCACGAAAAACCCATGCCTCTCGTGG
AAGGAATAAATGGAAAAATA--TTTTTTTCGTTTCCGAGAGCCACGGACGTGCCTCTCACT-------------------
----GAAGCAAAATCGTGTCTCTCACAGAAGGAAAAAAAAAAGAGAAAACACATCTTTTTCGTTTCCAAGTGGCACGGCC
GTACCTCTCGCGGAAGCAAAACCTTGCCTCTAAAAGAAGGAAAAAAAGAAGAGAAAATGTGTGTTTTTTTTCATTTCTGA
GAGCCATGGCCGTGCCTCTTGCGGATACAAAACCTTGCCTCTCACGGAAGCAAAACCGTACCACTCACGGAAGAAAAAAA
ATAAAAAATACATTTTTTTTCATTTCCGAAAGGTACGGCCGTGCCTCTTGCGGGAGCAAAATCGTGCCTTTCACGGAAGG
GAAAAGGAAAACATGTTTTGTGCCTCTCGTGAAAGCAAAT-CCGTACCTCTAGCGAAAGCAAAAAAACATGTTTTTTCTG
TTTTCGAGAGGCACGACCATGCCTCTTGCGAAAGCAAAACCATGCGCTCGTGGAAGTAAAATCGTGCCTCTCGCAGAAGC
AAAAAAAA--TATTTTTTTCTCAAAAAAAATCATCCAAAAGCTAAAAAAGACCGGTGTAAAATAAAAAAGGTGAAAAAAT
CAGAAAAATAAAAAGTCTAAAAAAG-GAAAACACGTGCAGAAAAATAAAAATAAAATAAAATTCGGAGAAAACGTCCCGA
TCTTGACACGTGGCGGCGGCTGAGAGCACGCCAAGTGACGTACTCTCAACCCACCCTGAAGTGATTGTTGGAAGGCTTCA
AAGAAGCGATCATTAACTAGTTGCTCTCAAGCGAATGGCACCACGCCGTGCTCTCACGTGTGAAGACTCTGGGCCAGCGC
AAATAGTGAGCTCAGACAACACTGGCCCGTTGGATCGGTCTCAGTCCCAACAGCATTTTTCGCGCTAGCGTTTGACTCTC
GCTCGATCACTCGACCACCGCCCGAATGATCGATGGTCGACGCTCCGGACGGCGGTGTGCGCGCCAACGGCGAGGCCACC
TCCTCCCACTCATCTTCCGGCGAGGAGCATGCTCCCCCGGCCGTACTCTGCGGCTTCGTCAACGGTGGCCAGCCGCTGCC
CCGACGCCCCCTGGACGAGGCGACGCGCGCCGGTGAGAGATGGTGGCCGCGCCAGACGACGGAGGACGCCGCGCGCCGCC
TGGTGACGTGGACTAGGGACGGCGGCTCCGTCCGCGCGCTGCTCGTCGTGTCGGTGAGCCTCCGCTTTCATAAACCCAAG
GACACCATGATTTGGATCGCGCCAGCAGCTATAACATCATTGATCCCCCGCAGGTTGGATCCGTGGCCTCCGTACCACTG
ACTGTCCTCCTGGTCTTCACGTTCCTCCTCGCGGCGGCGACGACGACCGCCATCGTCACTTCGATCGTCATGTCCCTGGC
TGCCGCCGGAGGATTCATGTCTGTGCTATTCGCTTTCGCGGCGGCGATGTACGTCGGGGCAGTGTCAGTCGCCATCCTTG
TTATTTCAGCAACGACCGTGGCAACAGTCGTTGCCATCACGATTGCCAGTGGTACGTCTAAAGTTTCATCAC--------
-----------TCTTGCTTGAAACGCTTCTTGTTTTTTGGGGTGGTCCTCGACCTCTCTTTTTGCGAAAAAGATCTAGAT
ATGTTATAAAAGTTCATCATAAGTACAAAGCACCTCAA------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATCAATATTCGGTAGGTTA--------
---------------------------------------------------TAAGCTGGTAACAACGTGTTGTCAGTTGG
TTGTTCGTTCCGAAATGGTAA------TCAGATGTTCACCTTCAAAAATGAAGTAGTGGTTAAAAGTATTGTCTGAAAAA
CACGTTAGCAACAGGCACCAGGTCAAGTACAA------------------------------------------------
-----------------ACTGGGATGTGGTAGGCATGAATATGGTTCTTCAAATAGGAACATGAGCAAAGGGTAATAGGG
CGTTTAACACAGTTTCCTCCATGGCCCGCGGATTTTTCTTTTTAG-ATGGTGTTTGAACTGAAACAAGAGCTCTTTAGAC
ATATTTTGCTTATTATCGATGACCTAGAAACATGTGCACAGCTAAATGCAGAACGTTAATCAAGCATATTATTTGCAGCA
ATCCGTCTGACCATGCATACCATTGCAGGTTGGGTCGCGTTCTTCTGGATTCTTTGGTTTTCTGCTAAGAGATGCATGGG
CCTTGCTTAGTTCTAAGAGATCAGTAGGCACGACAAGCTAGCGATCAGATCTACGGCTGTCTGTATAAGATAGAT-AAAT
CATTGCAATGATGTGAACCATGTGAAGCTAGGCATCTAGCTAGCT------ATGTGAATAATAGGCTGCTCTTTCTTTAC
AACAGCGTAGATCAGGGATTCATGTAAAGTTCGTCCTGGC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------ATATGATTTTGTTGTTAGTTTTCAGTCTGTGACCCAAATCTTGCTTCA
TAGGATCGCTTATTCTGAATGTAGAACCTTATTTCTTCCAC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TAAGGCGGAGTATATTCAATCCGAGCTCTTTTATGGTACCTGGG--------------GGGTTG
CATTGGTTGTGCATGTGTAATATGT--CACCAAAAGTATACTACAG---------------ATTAAGCTTTTCTATACCC
CTACTAATAAAGCAAAGTGTGTTTCCCCAATTTTTTCATCCGTTCACTGCCGAATTTAAAGATTTTTTGTACGTGGGCCG
CGCGCTGTGGCCCAGCGAAGCCTGCCCACTTATATTTCTGCCCACACAGCTGGGAAATTATATTTTCCGCCCTAGGCGAC
AAATAGTCGCATTTTCGCACAGGACAACCAATAATGGGCTGGCCCATTTGTTTTTTTTCTGTGTTGTACATCTATTTTTA
TTCTCCTTTCCCTATATATTTTTCCATTCCAAGTTAATTTTTCTTTTAGAATTTATTTCATAAATTAAATTCCTAAAAAA
ATCAGAATAAAAAAACAAATTTTGGAAAATGTTCAGAATTCCAAATTTTTGTTGCTATTTTGAAAAATATTCAGAACTTG
CAAAAAGTTTTCCATTTTTTCAAAAAACAATTGTTTTTCAAAAGTGTTAGAGATTTCTAAAAAGAAATTGTCATTTCAAA
AAATGCTCCAAATTCGAAAAAAATATTGTTTTATTCAAATTTCTGAAATTAAAAATAATGTTCATGTATAAAAGATACAC
ATTTTCTAAAAAACTTATAAATTTTCAACACATGTCCCCGTTTTAAAAAAATGTTCACAAATTCAAAAATGTTCATGTTT
TTATGAAAAAAATTGTGTTTTGAGAAAATGTTTGTGAATTTTAAAAGATGTTCCCTTTCATATTTCTTCGCGTTTTTTTA
AAAAGTGTACATAATTTTCAAAATTCAAAAACTTCATACCTTAAAATCCCCTCGATTGAAAGGATTGAAAGGAAGAGTAG
ATTGAATAACTCATCGGCCTTCTCTGGCGTACGATGACGTAAACAACTCTTAAATGCCTTTGATCAATGAATGGAAAAAT
AGCGGATTTGTTCCTTCACACACGGCGAAACCGAGAAGCTAAATGTTTCTTTTTCATGTGCACGCAGGATTTTACATAAT
TCTCACTGTCTTTAAATGCAAATTATTTTATCTTCCGTTGCAACGCACGGGCATATATGCTACTTCCTCCGTCTCAGTTT
ACAGGGCATGCACGTCGTTCTAGGTTGAGAATTTAACTAGCTATATATGTATTATATGTGATGAAAAATATATGTTTAGA
AACTACATCCGCTTAAGAATCCAATAATATACTTTTGATGACATATAACTCATATTTAGTTAGTCAAATAGATGACCTAG
AACTACGCTCACGCCCTATAAACCGAGATAGAGGGAGTAGTAAATATATATTTTTCGTCACATATACTCCCTCTGTCTCT
AAATATAAGCCTTTCTAGAGATTTTAATACAGATTACATATGGATGTATATAGTCCATATTGAAATCTCTAAAAAGACTT
ACATTTTTTTAAATTATATTTAGGAACGGAGGAAGTAATACATATTTGGTTAGTCAGATTGCCGACCTACGCACATACCC
T-------------AGGTAGTTCCCTGTAATGCGTATAACGATAAGCATCCCTATGGTTTTGGGTACATGCCAGGGTCTC
CAAATCTTCAGTCTCGAAGCAAAGACTTCACGATGAGATGGCTCCAGCAACAGCGTAATGTTGATCCTGAGAAAACATGG
ATAGGCCTCACACTCTCAAAGCGAACTCTTTT------------GTGTGTATCCTCCACAGCCCACATCGACGTACACCA
CATTCTCTCGATAGTGTCACC-----------------ATCAGGGCAAACCTTCC-GACCACTCGACGA-AAAAAACAAC
TGATGGTTGCAGGTGTGCATTGTGTTAGCCAAGGGATGCGACGAGATATCCAGGGTCTAACACTGCAGCAGTGCAACACC
AG-----C-----AGAACACCATCGACACACATAACTTTCATAATTTCTCACAATATATAGATGTAATTTTTATTAAGTT
GTGGAAAAAAGAAGGATCACATATACCAGGTCTGAAATTTTAATAT----------------------------------
--------------------------------------------------------------------------------
-GTATCAGAATTCAGAACCAGAGGTAAAACCTGGGTTTTTATTTTCTGCATATGAAACACCCACCCCTCAAAAAAAGAAA
CACCCAAGGAT
>chr5A_873
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-------------------------------CGAATGGCACGATGCTGTGCTCTCACATGTGGGGCAACTGGGCCGGCCC
-AGTAGTGAGCTCAGACAACACTGGCCCGCTGGATCGGTCTCAGTCCCAATAGCATTTTTCGCGCTAGCGTTTGACTCTC
GCTCGATCACTCGACCACTGCCCGAATGATCGATGGTCGACGCTCCGGACGGCGGCGCGCGCGCCAACGGCGAGGCCACC
TCCTCCCACTCATCTTCCGGAGAGGAGGACACTCCCCCGGTCGTGCACTGCGGCATCGTCAACGATGGCCAGCCGCTGCC
CCGACGCCCCCTGGACGACGCGACGCGCGTCCGTGAGAGATGGTGGCCGCGCCAGACGACGGAGGACGCCGCGCGCCGCC
TGGTGGCGTGGACAAGGGACGGCGGCTCCGTCCGCGCGCTGCTCGTCGTGTCGGTGAGCCTCCGCTTTCATAAGCCCAAG
GACACCATGATTTGGATCGCGCCAGCAACTATAACATCATTGACCCCCCGCAGGTTGGATCCATGGCCTCCGTGCCGCTG
ACTGTCCTCCTAATCTTCACATTCCTCCTCGCGGCGGCGACGACGACCGCCATCATCACTTCGATCGTAATGTCCCTGGC
TGCCGCCGGAGGATTCATGTCTGTGCTGTTCGCTTTCGCGGCGGCGATGTACATCGGGGCAGTGTCAGTCGCCATCATTG
TTATTTCAGCAACGACCGTGGCAACAGTCGTTGCCATCACGATTGCCAGTGGTACGTCTAACGTTTCATCAC--------
-----------TCTTGCTTGAAACGCTTCTTGTTTTTTC-GGTGGTCCTCGACCTCTCTTTTTGCGAAAAAGATCTAGAT
ATGTTATAAGAGTTCATCATAAGTATAAAGCACCTCAA------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATCAATATTCGGTACTCCCTCTGTCCC
ATATACTAGTGTAAAAAACGTTCTTATATTATGGGACGAAAGGGAGTAGGTTAAGCTGGTAACAACGTGTTGTCATTTGG
TTGTTCGTTCCGAAATGGTAA------TCAGATGTTCACCTTCAACAATGAAGTAGTGGTTAAAAGTATTGTCTGAAAAA
CACGTTAGCAACAGACACCAGGTCAAGTACAA------------------------------------------------
-----------------ACTGGGATGTGGTAGGCATGAATATGGTTCTTCAAATAGGAACATGAGCAAAGAGTAATAGGG
CG-TTAACACAGTTTCGCCCATGACCCGCGGATTTTTCTTTTTAGAATGGTGTTCGAACTGAAACCAGAGCTCTTCAGAC
ATATTTTGCTTATTATCAATGACCCAGAAACATGTGCACAGCTAAATGCAGAACGTTAATCAAGCATATT---TGCAGTA
ATCCGTCTGACCATGCATACCATTGCAGGTTGGGTCGCGTTCTTCTGGATTCTTTGGTTTTCTGCTAAGAGATGCATGGG
CCTTGCTTAGTTCTAAGAGATCAGTAGGCACGACAAACTAGCGATCAGATCTACGCCTGTATGTATAAGATGGAT-AAAT
CATTGCAATGATGTGAACCATGTGAAGCTAGGCATCTAGCTAGCTATAGCGATGTGAATAATAGGTTGCTCTTTCTTTAC
AACAGCGTAGACCAGGGATTCATGTAAAGTTCGTCCTGGCCTGTATTTGAATCCGAGCTGCTCCCTCACAAACAGTAAAA
TCCAAAAAATAGTAAAAAAGATTAAAAAATCTGAATCTTTTTTGTGATAAACATTGATGAAAGTTTTAACTTCCTGAAAT
TTTTTGTGATGAAATGACATTCGTGTAGGCTGTCCAAAAAAACAAAATCAATGCTCCGAAAAACCTATTGTTGGAAGCAT
TTTGGAGCATCGAATTTGTTCTTTTTGTCCAGACTTCTACCAATGTTATTTCATCACAAAAGTTTGAAAAAAGTTAAAAC
TTTCATCAATGTTTATCACAAAAAAATAAATTGTTTTTAGTTTTTTTTCAGATTTTACTGTTTAACAGGGAGCATGTGAG
CTTAGGATCAAAAGAGCACTTTCGGTCCTGGCATATGGTTTTGTTGTTAGTTTTCAGTCTATGACCGACAATCCACTTCT
AAGCCCATGCTTAGCTGCACCCGCGCTGATGAAAAAAATCAAAACAAATACTAGAAAAATTCCAAAAACAAATCGGGGTG
ACCCTGATTTGTCTTTTTTGCCGAGAGTTGCTCAGATGTTCAAATAAGTTGAAAATTAGAGCGGACCTCACACATCAATT
TATCTACCACACAAAAAAATTGAAATTTTTTTAGCATTTGTTTTGATTTTTTTTCTGACCGAATGCAAATGAGTCTAGGC
ACCGAAACACCGCAAGTAAGGCAGAGTATATTCAATCTCAGCTCTTTTATGGTACCACAACCCCCAACAATGCCGGGTTG
CATAGGTTTTGCATG-GTAATATGT--AGCCAAAAGTATACTACAG---------------ATTAAGTTTT---------
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----------------------------------------AAA-------------------------------------
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----------------------------------------------------------TTTGGATATATGCCAGGGTCTC
CAAATCTTCAGTCTCAAAGCAAAGACTTCACGATAAGATGGCACCAGAATGCTTTGAGAGTGAGGCCTATCTACTGT---
-------------------------------CAAACTCTTTTGTGTGTGTATCCTCCACAGCGCACATCGATGTGCCCCA
CGTTCTTTCGACAGTGTTACC-----------------ATCAAGGCACACCTTAC-GACGCCTCGACGACAAAAAACAAC
TGACGGTTGCAGGTGTGCATTACGTTAGCCAAGGGATGTGCCAAGATATCCAGGGTCTAACACTGCAGCAGTGCAACACC
AG-----CGGTCCAGAACACCATCGACACGTATAACTTTCATAATTTTTCACAATATATAGATGTAATTTTTATTAAGTT
CTG---AAAAGAAGGATCACATATACCAGGTCTGAAATTTTAATGTGTACTCCCTCCATCCGGAAAAGCTTGTCCCAAGC
TTGTCCATCAAATAGATGTATTTAGCATTAACTTAATGTTAGTATATCCATTTGAGGGACAGGTTTTTCTGGACGGAGGG
AGTATCAGAATTCAGAACCAGAGGTAAAACCT--------ATTTTCTGCATATGAAACACCTACCCCTCAAAAAAGGAAA
CACCCAAGGAT
>SNPs
-----------------S-----S-SS-S------------SSSS-------------------S--S--------SS--
------S----S-------SSS--------S----------S------------------SSSSSSSSSSSSSSSSSSSS
SSSS---------S----S---------------------S---S--SSSSS---------S----S--------S---S
---------------------SS--------S-S------------S-SS----------------------S-------
------S---------------S---S-------------------S----------S----S-----------------
---SS---S------------S--S----------S--SS-----------------------------S----SS----
-----S---------S-S-S-S-SSS--SS--S--SS-SSS----S---------S-------------S-S-----S-S
S--------S-----S--S--------------------S-----S----S----------S------------------
--------SS----S----------S----S-SSSS----------------S-S--S---SS------S----------
-----------------------SSS-----------S------------------------S-S-------S----S--
S-S---------S-----SS---S---S---S-----S----------S-------S--------S-----S-----S-S
---S---S---S--S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------S----------------------S-----S-----S---S-
---S--------------------S---S---------S-----------------------------------S-----
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
---------------------S---------------------------------------------------S------
------------S-----------------------------------------------------------SSSSSSSS
SSSSSSSSSSS---------SS-S------------SS-SSS--------------------------------------
----------S--S----S-S-----SS-SS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--------SSSSSSSS
S--------------------------------------------------------------------S----------
------S-------SSS----SSSSSS----------------------------S---------SSS------------
-----------------------SSSSS-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS----------------------------------S-------------S--------S-----
-----------------------------S---------------------S------------------------S---
-------------------------S------------------SS-------S----SSSS-S----------------
----S-----------------------------------------------------------------S---------
---------------------------------------------------------------------------S----
-------------S---------------S--------------------------------------------------
-----------------S----S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSSS---------------------
----S------SSS------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SS-------------------S-SS-----SS-SSS---------
------SS-S-----S----S----SS-----------------S-SSSSSSSSSSSSSSS-------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------SSSSSSSSSS-SSS-----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-SSSSSSSSSSSSS-------S----------SS-----SSSS-SS----------------------------------
----------S----------S-S--------------------------S---S-------------------------
----S----------S---SSSS-SS-SS-S---------S--S-------S--------------S--S----------
------------------SSSSSSSSSSSSSSSSSSSS---------------S-S------------------------
-------S-S----S---------------------S---S-------------------S-------------------
--SSSSS-------------------------------------------------------------S-----------
-----------------------------------------S--S-----------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------------S----------
-----------
>forward_87
-------------------------------------------------------------------GTGCCTCTCACGG
AAGGAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2211
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--------------------------------------------------TACTCCCTCCGTCCGGAAAT----------
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>forward_1140
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TCCTCCCACTCATCTTCCGT------------------------------------------------------------
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-----------
>reverse_5031
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