>input_sequence_49615
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--------------------------------------------ATGCGGCCGCCGCGCGCGCTTCCGCTGCCGCACTTC
ACTCTCCCGCCGCTTGCCGGCGAGGACCTCGCCTTCGTCACCGCCCTCCGCTCCCACCTCTCCTCCTCCCCGGAGCTCGC
GCCCTCCTCCCTGTCCCGCTTCCTACCCCAACTCAACCCCCTCCGCCTCTCACACCTCCTCCTCTCCCCGCCCCGGGTGG
CTCACGACCTCCTCGGCTCCCTCCTCTCCTCGCCGCCGCCCCCGCTCCCATTCGCCCTCCTCCTCCACGCCATCACCCCG
CGCCGCTCCTCCGAGCTCCTCGCCTCACTGCTCCCCTCCGTCTCGCACCACGCCTTCCCGGAGCTCCTCCACCACCTCAT
CTTAACCGCTCGCCTCGCCGCCGGGAGCCGCGGCACCGGCGCCGCAGTGCCCGCCGTCGACGTTCTCTTCTCTGCTTGCG
CGCGCCGAAACAAGCTCTCTCAGGCCACGCTCACCTTCCGCGCCATGCGTGCGCATGGCCTGCTCCCGCGGGTCGAGTCC
TGCAACGTCTTCATCTCCGCGGCGCTCCGCCTGAAGCGCCCCGAGATCGCCGTGTCCTTCTTCCGGGAGATGCGCCGGTG
CTGTATCTCGCCCAACATGTACACGGCCAACATGGTGTTGCGGGCCTTCTGTGCCTTGGGGCGGGTCGCCGACGCGGCCA
CGGTGCTCGATGAAATGGCGGATTGGGGGGTTGATAGGACGGTGGTCAGCTTCAACACGCTGATCGCTGCTTATTGCAGG
GAGCATGGTGGTCTGGAACATGCGCTGGAGCTGAAGAAGAAGATGGAGCTGGAGGGGCTAGCGCCCAGTGAGGTGACCTA
TAACACGATCCTCCATGTGCTGTGCAAGGAGGGGAGGATGCAGCAAGCGAATCGTTTGTTGAGCGAAATGAAGGTGAAGA
GGGTTGTGCCGAACACAGTGACATACAATACTTTGATTTATGGGTATGTCATGCATGGTGATAATGGAACAGCGCGGAGG
GTTCATGAAGGGATGGTTAAGAATGGAGTCGAGCTTGATATCATAACTTACAATGCGCTCATTCTTGGTCTTTGCCGGGA
TGGGAAGATAAAAAAAGCCGTGCATTTGTTTCAGCAGCTTGACAGGTCCAAGCTTGAACCGAATGCTTCAACTTTCTCAG
CGTTGATTCTTGGATACTGTATGACGCAGAATTCAGAGCGAGCACTGCAACTGTTGAAGGTGATGAAAAAATCCGGCTTC
CATCCGAATTACGACACATATAAGATTGTTATATCTGCTTTCTGCAAGAATAAGGATTTTGAAGGAGCAGTGGATGTGAT
GAAGGAGCTTCTCGAGATGTGCATGGCTCCTGACAAGGTCTTATTGCATGAATTCTTTGAAGCTCTCTCAAAGGCTAAAA
AGCTCCACCTAGCAGAAGATCTGTGGTCAGCTGATAAAGGTGGAAAGTTTATTCCATCTATCTACTATACTGGTGATTAC
AGGAACAACGGCGAAGAGAAAACTGCATGTTAA-----------------------------------------------
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>chr2B_1_TraesCS2B01G343000
CTCGTCTTTATACTTTCGTACTTGTTTCATTGTTTTTCGGTTTGGCTTGTAAAAGTATGTTCCGTTGTTATTTTCATTCT
TAGGCTTTATTAGTTCAAAGCCAGACTTTTCTTTGGCCTTTCTCCACGGGGCTCACGTTTCTATAGTACTGCAATATTAA
TTTGTTAGAAGCGCAATCATGCCACTTATCATGAAAAGATGACTTCTTGATATAGGAACAGTCGTCGTCGTCATGGGTAC
TTTTGGTCTCCTTGCCTCCTGCTACCATCTTGGCGCCGAGAGGT-GGAGGGCCTCCGATCTTTAAGGTTTTG-TGGCATC
TATTGGTGATCTATATTTGTATGAATAAAGTTACTCTTG-TTTTATTTTGCGGTGCCACAAAACTAAAGAGGTTTGTGTC
CTCAATGATCTTAGTAATCAGATCTAATGAATTTATGTTATTGCTTTAAGTTGTTTTTGTTGGTTTGATTTTTTTGTGAA
GTTAAAATCTTTCCTTGACATCATGTAAAGATATTATGATTCGACGACCTGGACTTCTAGGATATCATCACTGGCTCAAA
GTACGCACATGGCTCAAGTC-TTGCATCTTTTTGGATAGGTAACTCAGGGGGTTTTCAAAAAACTTTATTGGTAACTAAG
TTTGTGCGGGTGAAAGAGTGGCAACACTGTTGCTCCAGTCTAATTTTTGTTTCTTTACTAAAGTCTTGAGAATATTTCGT
CCTCCAAAAATTAATACCAAAGAGAAGATGTTTTCAACAGATACCACTGTGATTCTTAACACATGACTCACTTTGCATTA
TTTTTCTAATCTTAAAATCCAAAGCAGTGTACGTATAATAGAGAAGATTGTTGCTCCAGTCTATTTTTCTTAATCTTAAT
CTAAAAAAAAATCTGTTACAGGGGTAAAATTGTCAAAGATCTCCTCACCCACCTCGCCTGCGACTGCTAGCGACGACTGC
CACGGCGCAGAAGCGTCGGATCCGGCGCTAACACCCCATCACCAATGCGGCCGCCGCGCGCGCTTCCGCTGCCGCACTTC
ACTCTCCCGCCGCTTGCCGGCGAGGACCTCGCCTTCGTCACCGCCCTCCGCTCCCACCTCTCCTCCTCCCCGGAGCTCGC
GCCCTCCTCCCTGTCCCGCTTCCTACCCCAACTCAACCCCCTCCGCCTCTCACACCTCCTCCTCTCCCCGCCCCGGGTGG
CTCACGACCTCCTCGGCTCCCTCCTCTCCTCGCCGCCGCCCCCGCTCCCATTCGCCCTCCTCCTCCACGCCATCACCCCG
CGCCGCTCCTCCGAGCTCCTCGCCTCACTGCTCCCCTCCGTCTCGCACCACGCCTTCCCGGAGCTCCTCCACCACCTCAT
CTTAACCGCTCGCCTCGCCGCCGGGAGCCGCGGCACCGGCGCCGCAGTGCCCGCCGTCGACGTTCTCTTCTCTGCTTGCG
CGCGCCGAAACAAGCTCTCTCAGGCCACGCTCACCTTCCGCGCCATGCGTGCGCATGGCCTGCTCCCGCGGGTCGAGTCC
TGCAACGTCTTCATCTCCGCGGCGCTCCGCCTGAAGCGCCCCGAGATCGCCGTGTCCTTCTTCCGGGAGATGCGCCGGTG
CTGTATCTCGCCCAACATGTACACGGCCAACATGGTGTTGCGGGCCTTCTGTGCCTTGGGGCGGGTCGCCGACGCGGCCA
CGGTGCTCGATGAAATGGCGGATTGGGGGGTTGATAGGACGGTGGTCAGCTTCAACACGCTGATCGCTGCTTATTGCAGG
GAGCATGGTGGTCTGGAACATGCGCTGGAGCTGAAGAAGAAGATGGAGCTGGAGGGGCTAGCGCCCAGTGAGGTGACCTA
TAACACGATCCTCCATGTGCTGTGCAAGGAGGGGAGGATGCAGCAAGCGAATCGTTTGTTGAGCGAAATGAAGGTGAAGA
GGGTTGTGCCGAACACAGTGACATACAATACTTTGATTTATGGGTATGTCATGCATGGTGATAATGGAACAGCGCGGAGG
GTTCATGAAGGGATGGTTAAGAATGGAGTCGAGCTTGATATCATAACTTACAATGCGCTCATTCTTGGTCTTTGCCGGGA
TGGGAAGATAAAAAAAGCCGTGCATTTGTTTCAGCAGCTTGACAGGTCCAAGCTTGAACCGAATGCTTCAACTTTCTCAG
CGTTGATTCTTGGATACTGTATGACGCAGAATTCAGAGCGAGCACTGCAACTGTTGAAGGTGATGAAAAAATCCGGCTTC
CATCCGAATTACGACACATATAAGATTGTTATATCTGCTTTCTGCAAGAATAAGGATTTTGAAGGAGCAGTGGATGTGAT
GAAGGAGCTTCTCGAGATGTGCATGGCTCCTGACAAGGTCTTATTGCATGAATTCTTTGAAGCTCTCTCAAAGGCTAAAA
AGCTCCACCTAGCAGAAGATCTGTGGTCAGCTGATAAAGGTGGAAAGTTTATTCCATCTATCTACTATACTGGTGATTAC
AGGAACAACGGCGAAGAGAAAACTGCATGTTAACACGCAGTGACCTCAATGGAGCCTCATTAGAATGTATGATTGGTTTG
TCTGGAGAACAATAGAACTTAAATCCTTCTGCTTGTACAAATGTGGAATTTGTGTTGGCACATGCCTATGAGCGGATCTG
TTT-GGTTAAATGAAGACAACCTGACAATTATTCTTGCCTGTAGGTAGCTGAATTGCTTAGTCCTGAG---AGATGACTG
TAGCAAATGGAGTACTAC---------G-----TGTGTACACAAAGATGTCAACCGAGAATTTTTGATAATCAGATGCTT
ATGGAGTTACAGGCTTGCACTTTTCTTGCAACAACTTGTGTTATTCCATTGACAG-AGTATCAGATGAAATTCCACTAGT
GAAAAATCGAATTGATTTGTGCCGGTTCTAGCACCAGCACCATATCAGATAATGCTCACTTCAAACATCTTCTTGAAACC
ATCTAAAAGGCCATATGCTCGGATTTTCAAATTCAAATCCAGTTTGTATTGGAGGAAAATTTCTGCAGGCAAAGCAGTTG
GCACTGACATCCCCATTTTCTTCAGATTTTGAACATAACTTATAAGACGTCGTGGTTCTCCTCTTTTATATGCCTCTCCA
CACAATTTTCTTTGAATATGTATTTTGTAAGAGATGTTTGATAAATTAACAATTACCACAAAAAAGAGAACCATCGTGCA
TGAAGAAGACAGATACAATTTCTC-TATCAACTATTCAACTGTGAAATTGCA-TGATGCACAACACACTCAATATAGTAA
TATCTCCATGACAAAGATTAGTTACTTACG----------TAGTTGTATTTGACTCCTAGTTTGTCTATTAAAGGAAAAT
AAATGTTACTCCCTCCGTTCCGATTTACTCGTCGTGGTTTTAGTTCAAATTTAAACTAAAACCACGACGAGTAAATCGGA
ACGGAGGGAGTAGTAGCTTTCAGCATTTCCATTATGGCAGTCATCCTGTTTTATGGTGATCAGCATAGTACTACCT----
--TATTTGCCTTCACATGCATAATTCTACA
>chr2A_204
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-------------------------------------------TTCTTGATATAGGAACAGTCGCCGTCTTCATAGATAC
TTTTGGTCTCCTCGCCTCCTGCTGCCATCTTGGCATCGAGAGGTGGGAGGACCTCTGATCTTTAAGGTTTTTTTGGCATC
TATTGGTGATCTAGATTTGTATGAATAAAGTTATTCTTATTTTTATTTTGCGGTGCCACAAAGCTAAAGAGGTTTGTGTC
ATCAATGATCTTATTAATCAGATCTAATGAATTTATGTTACTGCTTTAAGTTGTTTTTGTTGGTTTGATTTTTTTGTGAA
GTTAAAATCTTTCCATAACGTCATGTAAAGATATTATGATTCGACGACCCGCATTTCTAGGATATCATCACTGGCTAAAA
AAT-GCACATGGCTCAATGCTTTGCATCTTCTTGGATGGGCAACTTAGGGGGGTTTTAAAAAACTTTATTGGTAACTAAG
TTTGTGCGGGTGAAAGAGTGGCAACACTGTTGCTTCAGTCTAATTTTTGTTTTTTTACTAAAGTCTTGAGAATATTTCGT
CCTCCAAAAATTAATACCATAGGGAAGATGTTTCCAAAAGATACCACTGTAATTCTTAACCTATGACTCACTTTATATTA
TTTTCTTGATCTTAAAATCCAAAGCAGTGTAGGTATAATAGTCATGAGTATGAATCTAAGAAAGAAAAAGG---------
--------AAATCTGTTACAGGGGTAAAATTGTGAAAGATCTCCTCACCCACCTCACCTGCGACTGCGAGCGACGACTGC
CACGGCGCAGAAGCGTCGGATCCGGCGTTAACACCCCATCACCAATGCGGCCGGCACGCGCGCTTCCGCTGCCGCACTTC
ACTCTCCCGCCGCTTGCCGGCGAGGACCTCGCCTTCGTTACCGTCCTCCGTGCCCACCTCTCCTCG---CCGGAGATCGC
GCCCTCCTCCCTCTCCGGCTTCCTACCCCAACTCAACCCCCTCCGCCTCTCACACCTCCTCCTCTCCCCGCCTCGGGTGG
CCCACGACCTCCTCGGCTCCATCCTCCCCTCGCCGCCGCCCCCGCTCCCCTTCGCCCTCCTCCTCCACGCCCTCACCCCG
CGCCGCTCCTCCGAGCTCCTCGCCTCCCTGCTCCCCTCCGTCTCGCACCACGCCTTCCCGGAGCTCCTCCACCACCTCAT
CTTGACCGCTCGCCTCGCCGCCGGCAGCCGCGGCACCGGCGCCGCAGTGCCGGCCGTCGACGTCCTCTTCTCTGCTTGCG
CGCGCCGAAACAAGCTCTCTCAGGCCACGCTCACCTTCCGCGCCATGCGTGCGCATGGCCTGCTCCCGCGGGTCGAGTCC
TGCAACGTCTTCATCTCCGCGGCGCTCCGCCTGAAGCGCCCCGAGATCGCCGTGTCCTTCTTCCGGGAGATGCGCCGGTG
CTGTATATCGCCCAACATGTACACGGTCAACATGGTGTTGCGGGCGTTCTGTGCCCTGGGGCGGGTCGCCGACGCGGCCA
TGGTGCTCGATGAAATGCCGGATTGGGGGGTTGATAAGACGGTGGTCAGCTTCAACACGCTGATCGCTGCTTATTGTAAG
GAGCATGGTGGTCTGGAACATGCGCTGGAGCTGAAGAAGAGGATGGAGCTGGAGGGGCTAGCGCCCAGCGAGGCAACCTA
TAACACGATCCTCCATGTGCTGTGCAAGGAGGGGAGGATGCACCAGGCGAATCGTTTCTTGAGCGAAATGAAGGCGAAGA
GGGTTGTGCCGAACACAGTGACATACAATACTCTGATTTATGGGTATGTCATGCATGGTGATAATGGCACAGCGTGGAGG
GTTCATGAAGGGATGGTTAAGAATGGAGTCGAGCTTGATATCATAACTTACAATGCGCTCATTCTTGGTCTTTGCCGGGA
TGGGAAGATAAAAAAAGCTGTGCATTTGTTTCAGCAGCTTGACAGGTCCAAGCTTGAACCGAATGCTTCAACTTTCTCAG
CGTTGATTCTTGGATACTGTATGGCGCAGAATTCAGAGCGAGCACTGCAACTGTTGAATGTGATGAAAAAATCTGGCTTC
CATCCAAATTACGACACATATAAGATTGTTATATCTACTTTCTGCAAGAATAAGGATTTTGAAGGAGCAGTGGATGTGAT
GAAGGAGCTTCTCGAGATGTGCATGGCTCCTGACAAGGCCTTATTGCATGAATTCTTTGAAGCCCTCTCAAAGGCTAAAA
AACTCCACCTAGCAGAAGGTCTGCAGTCAGCTGATAAAGGCGGAAAGTTTATTCTATCTATCTACTATACTGGTGATTAC
AGGAACAACGGCGAAGAGAAAACTGCATGTTAACACGCAGAGACCATGGT---GCCTCATCAGAATGTACAATTTGTTTG
TTTGGAGAACAATATAAGTTAAACCCTTCTGCTTGTACCAATGTGGAATTTGCATTGACACATGCCTATGAACGTTTCTG
TTTGGATTAAGTGAAGGCAACCTGACAACTATTCTTGCCTGTAGGTAGCTGAGTTGCGTGTTCCTGCAAGAAGATGAC--
TAGCAAATGGAATACTACATACTACGTG-----TGTCCACACAAATATGTCAACCAAGAATTCTTCATAATCTGATGCTT
ATGGAGTTACAGGCTTGTACTTTTCTTGCAACAGCTTGTGTTATTCCATTGACAAAAGTATCAGATGAAACTCCACTGGT
GAAAATTTGAATTGATTTGTGCTGGCTCTAGCACCAGCACCATATCAGATAGT----ACTTCAAACATCTTCTTGAAACC
ATCTGTTCGTAATG------------TCAATTTCAAATTCAGTTTGTATTGGAGGAAAATCTCTGCAAGCAAAGCAGTTA
ACAGTGATTTCCCCATTTTCTTCAGTTTTTTAACATACCTTATAAGACATTGTAGTTCTCCTCTTTTATATGCCTCTCCA
CACAAATTTGTTTGAATATGTAATTTGTAAAAGATGTTTGCTGAATTAACAATTACCTCAAAAAGGAAAACCATGATGCA
GGAAGAAGACAGATACAATATCTCTTATCAACTATTCAACTGTGAATTTGCATTGATGCACAACACACTCAATATAGTAG
TATCTCCATGCCAAAGATTAGTCACTAAGTCACTTACATATAGTTGTAGTTGGCTCCTAGTTTGTCTATTAAAGGAAAAT
GT------------------------------------------------------------------------------
----------TAGTAGCTTTCAGCATCTCCATTATGGCAGTCATCCTGTTTTATGGTGATCAGCATAGTACTACCTTAGA
AATATTTGCCTTCACATGCATAATTCTACA
>chr2D_945
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--------------------------------------------------------------------AGCGACGACTGC
CACGGCGCAGAAGCGTCGGATCCGGCGCTAACA-CCCATCACCAATGCGGCCGCCGCGCACGCTTCCGCTGCCGCACTTC
ACTCTCCCGCCGCTTGCCGGCGAGGACCTCGCCTTCGTCACCGCCCTCCGCTCCCACCTCTCCTCCTCCCCGGAGCTCGC
GCCCTCCTCCCTCTCCCGCTTCCTACCCCAACTCAACCACCTCCGCCTCTCACACCTCCTCCTTTCCCCGCCCCGGGTGC
CCCACGACGTCCTCTCCTCCCTCCTCCCCTCGCCGCCGCCCCCGCTCCCCTTCGCCCTCCTCCTCCACGCCCTCACCCCG
CGCCGCTCCTCCGAGCTCCTCGCCTCACTGCTCCCCTCCATCTCGCACCACGCCTTCCCGGAGCTCCTCCACCACCTCAT
CTTGACCGCTCGCCTCGCCGCCGGGAGCCGCGGCACCGGCGCCGCAGTGCCGGCCGTCGAAGTTCTCTTCTCTGCTTGCG
CGCGCCGAAACAAGCTCTCTCAGGCCACGCTCACCTTCCGCGCCATGCGTGCGCATGGCCTGCTCCCGCGGGTCGAGTCC
TGCAACGTCTTCATCTCCGCGGCGCTCCGCCTGAAGCGCCCCGAGATCGCCGTGTCCTTCTTCCGGGAGATGCGCCGGTG
CTGTATCTCGCCCAACATGTACACGGCCAACATGGTGTTGCGGGCCTTCTGTGCCTTGGGGCGGGTCGCCGACGCGGCCA
CGGTGCTCGATGAAATGCCGGATTGGGGGCTTGATAGGACGGTGGTCAGCTTCAACACGCTGATCGCAGCTTATTGTAAG
GAGCATGGTGGTCTGGAACATGCGCTGGAGCTGAAGAAGAGGATGGAGCTGGAGGGGCTAGCGCCCAGTGAGGTGACCTA
TAACACGATCCTCCATGTGCTGTGCAAGGAGGGAAGGATGCAGCAAGCGAATCGTTTGTTGAGCGAAATGAAGGTGAAGA
GGGTTGTGCCGAACACAGTGACATACAATACTCTGATTTATGGGTATGTCATGCATGGTGATAATGGCACAGCGTGGAGG
GTTCATGAAGGGATGGTTAAGAATGGAGTCGAGCTTGATATCATAACTTACAATGCGCTCATTCTTGGTCTTTGCCGGGA
TGGGAAGATAAAAAAGGCCGTGCATTTGTTTCAGCAGCTTGACAGGTCCAAGCTTGAACCGAATGCTTCAACTTTCTCAG
CGTTGATTCTTGGGCACTGTAAGGCGCAGAATTCAGAGCGAGCACTGCAACTGTTGAATGTGATGAAAAAATCTGGCTTC
CATCCGAATTACGACACATATAAGATTGTTATATCTACTTTCTACAAGAATAAGGATTTTGAAGGAGCAGTGGATGTGAT
GAAGGAGCTTCTCGAGGTGTGCATGGCTCCTGACAAGGCCTTATTGCATGAATTCTTTGAAGCCCTCTCAAAGGCTAAAA
AACTCCACCTAGCAGAAGGTCTGCAGTTAGCTGATAAAGGTGGAAAGTTTATTCCATCTATCTACTATACTGGTGATTAC
AGGAACAACGGCGAAGAGAAAACTGCATGTTAACATGCAGAAACCTCAATGAGGCCTCATTAGAATGTACGATTGGTTTG
TTTGGAGAACAATAGAACTTAAATCCTTCTGCTTGTACAAATGTGGAATTTGTGTTGACACATGCCTATGAGCGGTTCTG
TTTGGGTTAAATGAAGACAACCTGACAATTATTCTTGCCTGTAGGTAGCTGAATTGCTTAATCCTGAGAGAAGATGACTG
TAGCAAATGGAGTACTACATACTGCATACTACATGTCTACACAAAGATGTCAGCCAAGAATTCTTCATAATCAGATGCTT
ATGGAGTTACAGGCTTGCACTTTTCTTGGAACAACTTGTGTTATTCCATTGACAG-AGTATCCGATGAAACTCCACTAGT
GGAAATTTGAATTGATTTGTGCTGGTTCTAGCACCAGCACCATATCAGATAGTGCTCACTTCAAACATCTTCTTGAAACC
ATCTAAAAGGCCATCTGTTCGGCTGTTCAAATTCAAATTCAGTTTGTATTGGAGGAAAATTTCTGCAGGCAAAGCAGTTG
GCACTGACTTCCCCATTTTCTTCAGTTTTTGAACATGGCTTATAAGACGTTGTGGTTCTCCTCTTTTATACGCCTCTCCA
CACAATTTTGTTTGAATATGTATTTTGTAAGAGACGTTTGATAAACTAACAATTACCACAAAAAAGAAAACCATTGTGCA
TGAAGATGACAGATACAATATCTC-TATCAACTATTCAACTGTGAATTTTCA-TGATGCACAACACACTCAATATAGTAA
TATCTCCATGACAAAGATTAGTTACTTACG----------TAGCTATATTTGACTCCTGGTTTGTCTATTAAAGGAAAAT
GT------------------------------------------------------------------------------
----------TAGTAGTTTTCAGCATTTCCATTATGGCAGTCATCCTGTTTTATGGTGATCAGCATAGTACTACCT----
--TATTTGCCTTCACATGCATAATTCTACA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S----S----S-S---
------------S----------S----------SS--------------S----S---------------S--------
-------------S-------------------S----S-----------------------S-----------------
S------------S--------------------------S---------------------------------------
--------------S-S--S-----------------------------S-S-S----------------------S---
SSSS-------------SS-----------S------S--S----S------S---S-----------------------
----------------------------------S-----------------S---------------------------
-------------------S--S----------S---S------------S---------SS------------SS----
----SS-S-----------------------S---------SS-S--S-S-SSS--S-SSSS-SSSSSSSSSSSSSSSSS
SSSSSSSS-------------------------S---------------------S-----------S------------
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------------S-------------------------------------------------------------------
-S------------------------S----------------------S---------------------S--------
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---S-----------------------------------------------S----------------------------
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-----------------S----------------------------------------------------------S-S-
----------------------------------------S---------------------------------------
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--------------------------------S----------------------------------S------S-----
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-----------------------S----------------------------------S--------------S------
------------------------------------S-------------------------------------------
--------------------------------------S------------------------S----------------
-S----------------S----SS-------------------------------------------------------
----------------------------------------S----------SS----------------S----------
-S-------------------------------------------------------S-----------------S----
------------------------------------------------------------S-------------------
------------------------------------S------------------S------S--S--------------
----------------------------------------------------------------------S---------
-----S-S--------------S----------------------------S----------------------------
--------------S--S----S-S-------------S-----------------------------------------
--------S----------------S-----------S------------S-----------------------------
---------S---------------------------------------------------------S------S-----
-------------------S--------------------------S---------------------------------
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------------------------------------------------------------------
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>forward_144
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--------------------------------------------CACGGGGCTCACGTTTCTAT----------------
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>reverse_1995
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--------------------------------------------------------------------------CGGAGG
GTTCATGAAGGGAT------------------------------------------------------------------
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>forward_579
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-------------------------------------------------------------------------------A
GTACGCACATGGCTCAAGT-------------------------------------------------------------
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>reverse_2521
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----------------------------------------TGACCTCAATGGAGCCTCAT--------------------
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