>input_sequence_49605
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----------GTGCTTCCTCCCTCTCGAACCGGTGCTCTGATGGCGGTGGAGCACGATGAGGCCGTGGCTTCGCCTTCGG
TCACGGCCAGCAGGAAGAAGCGGGCGGCGTCCAGGCCGGCCTCCAACGGAGGGGAG---------------GGCTCATCG
TCGCGATGCAGCGGCGTGCACCGGATGCGCCCCGGGAAGCACACGGTGCAGATCAGGGTCCCGGGGCAGCAGCAATCCGC
CGGGGAGGCTGCCGGAGCGCACGGCGCGGCGGCCATCAGGCTGCACGCCGCGGCCGCGAAGACCAACTCCAAGCATCCTG
CGGCTGCTGTGACGAAGTCCCGCTCGGGGCTCTTCGGCGCGCACGGGACCCCGAGCGGAGAGCACGGGGCGCAGATCTGG
CCCCGCACCACCGCCGAGG---------------------AGGCCGACAGAGCGGACGAGGTGGCGGCCATCAGGCTGCA
CGGCACGGCGGCGGCCTTCACCGACGCCATCCAGCACGGCGACGACGGGGACGCGCCGCTCCTGCGCGTCTCCTGCGAGG
GCGAGGCGCCGGGGAACGCCGATAGAAATAAGAAGAAGCGGGCCGCGCCCAGGTCGGGGTTCCGCGGCGTGTACCGGCAT
CCCCGGAGCGGCAGGTACTCCGCGCAGATCCGGGACCCGGAGCGGCGAGCCAAGCTGTTCTGGCTCGGCAGATTCGCCAC
GGGCGAGGAGGCCGCGAGAGCCTACGACAAGGCGGCTGTCACGCTGTACGGCGACAAGGCCGTAACCAACTACGAGCAGC
CACGCACTGCCGCCATCGACGGCGAGGAGTCGCCCATGGACCTCTTCCCGGAGCTGCGCTCGAACATTCAGGCCTGGAGG
AAGGCATTGGGCGCTCGGTCGAGGCACGCCGGCGTGCACCCGTATCGCGGGGAGTACTCGGCGCAGATCTGGGACCCGGT
GTGGCTAGCTGACCAGGGGCTCGGCAGCTTCGGCGCCGCTGAGGAGACCGCCGGAGCATACGACGCAGCGGCTGTCAGGA
TGCGCGGCGCGGCGGCCGAAACCAACTTCAAGCAACCACCGCGCTCGGTCGCTGCTGCGGATGACGGTGAGGTGTCGGCC
ATGGACCTCAACGACTTCCTGGAGGTGGAGCTGCCGGCGCTCGACTTCCTCCCTGACAGCATCACCCCAGATGCACAGCT
GGACGATCTCTCGACTGGCTTGCCCCTGGTGGAGTTGCAGCAGGTGGATGAGCTCCTCGAGGACATGGGCTTCACCGATA
TGCTGGCCAGGGCTCAACGTACAGGTGCTCCTAG---TCCTACATAGTGAGTTCGATAGAGGCTTCACCATATATGCATG
ACAAAGTTCAGGCAACACTATGCATGCT-----TATGCTGGGTATTTGTTTGTGATCTTAGTTTGGTAGTGGACGTATGT
GTCTGACCTGATTGTGCTCTGTTATTATGAAGTCTTGGAAAGAGAATTGGCAGTAGATGCAAAGCTCCAACATGGTAATT
AGGTCTTACTAAATTTGCAATGTCAATTAAGTTGGTCTTGCAAG------------------------------------
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>chr6B_1_TraesCS6B01G159000
GGCGTTGAGGTGGATGGGCGCGGGCGTGG------AAGGCGCAATCACGCTCACCTT-GGGGAGTGTTTCCCGGAGAGTC
GGGAGACTTGCGGGTAGACGTGGAAGCCGGGCACCGGCTGCGTCTCCGACACGCGAGGCGAGACAGGCAGCACCATCCGA
GAAAACGCAGATGAGCCGGTGCTGGCCGCGACCACGGCGGCGTTGACGAAGCCGTGCTGGCCAGGGTTTAACCCTAGGTA
CATCAGCGCCTCCCTCGTTGCCGCTGCGACGCGGGCGTTGGTGGCCTCCTACTGCGCGGTGGC---CGCGATGGCGGGCG
TCG---------------TTGCGTCCGCTATGTGCCTCCGGCCCTTTCTCTTCGCCGACTCCCTTGCCCGCTCCTTGGGC
GTCAACTTCTTATTCGGCTTGGGCGCGGCGGCGGTCTTGCGGGGGGCACGAGGCTTGCCTTCGCC---AGAGGGGG-TGA
TCGTGATGGCGGACGAGGCGAGGAAGGCGAGGCCAACGGCGGCATCGAGGTCGTCGTCCATGGCGAG-CGGCGGGAGCGC
GCGCGGGCGGGAGGGTTTTGGG-------------------------------------------------G--------
------------------------------------------GAGGAGCAGGCGGGCGCCGCGCGCATCCGCCTCGTGTC
CGCGCCGACGCAAATGAGGCTCAAAAATGAGTCGGGAATAGGTCGACAGACGGATGAAAAGCGGACGTGCATCCGTTTAG
ATCGGCGCGTTA-GCCGACTTTTCTGTCTGCGCCGATCCAAATAGACGCGCGCGGAAAAAATGGGTCGCCGCGTTGGAGT
TGCTCTAATACCGTTTTTGACACTAGGTTGAATTGAACAAAACATGTTATGAATATTGAATTGCTGGGAATAACTGCCGT
GGTCAATGACAAGCGAGAGACTACTTTTATGAATGTTTATGAATCTGAATTTGCTTTTTGACTTGCGAACTTCAAAATGG
AGGCTGCTCCTACGACCACTCCTCTTCAGTTGCTCTTTTCGGATGGTAAACAGACCCTCTTCCTCTCTAAAACCCCAGGA
ACCCGACGACGTGCTTCCTCCCTCTCGAACCGGTGCTCTGATGGCGGTGGAGCACGATGAGGCCGTGGCTTCGCCTTCGG
TCACGGCCAGCAGGAAGAAGCGGGCGGCGTCCAGGCCGGCCTCCAACGGAGGGGAG---------------GGCTCATCG
TCGCGATGCAGCGGCGTGCACCGGATGCGCCCCGGGAAGCACACGGTGCAGATCAGGGTCCCGGGGCAGCAGCAATCCGC
CGGGGAGGCTGCCGGAGCGCACGGCGCGGCGGCCATCAGGCTGCACGCCGCGGCCGCGAAGACCAACTCCAAGCATCCTG
CGGCTGCTGTGACGAAGTCCCGCTCGGGGCTCTTCGGCGCGCACGGGACCCCGAGCGGAGAGCACGGGGCGCAGATCTGG
CCCCGCACCACCGCCGAGG---------------------AGGCCGACAGAGCGGACGAGGTGGCGGCCATCAGGCTGCA
CGGCACGGCGGCGGCCTTCACCGACGCCATCCAGCACGGCGACGACGGGGACGCGCCGCTCCTGCGCGTCTCCTGCGAGG
GCGAGGCGCCGGGGAACGCCGATAGAAATAAGAAGAAGCGGGCCGCGCCCAGGTCGGGGTTCCGCGGCGTGTACCGGCAT
CCCCGGAGCGGCAGGTACTCCGCGCAGATCCGGGACCCGGAGCGGCGAGCCAAGCTGTTCTGGCTCGGCAGATTCGCCAC
GGGCGAGGAGGCCGCGAGAGCCTACGACAAGGCGGCTGTCACGCTGTACGGCGACAAGGCCGTAACCAACTACGAGCAGC
CACGCACTGCCGCCATCGACGGCGAGGAGTCGCCCATGGACCTCTTCCCGGAGCTGCGCTCGAACATTCAGGCCTGGAGG
AAGGCATTGGGCGCTCGGTCGAGGCACGCCGGCGTGCACCCGTATCGCGGGGAGTACTCGGCGCAGATCTGGGACCCGGT
GTGGCTAGCTGACCAGGGGCTCGGCAGCTTCGGCGCCGCTGAGGAGACCGCCGGAGCATACGACGCAGCGGCTGTCAGGA
TGCGCGGCGCGGCGGCCGAAACCAACTTCAAGCAACCACCGCGCTCGGTCGCTGCTGCGGATGACGGTGAGGTGTCGGCC
ATGGACCTCAACGACTTCCTGGAGGTGGAGCTGCCGGCGCTCGACTTCCTCCCTGACAGCATCACCCCAGATGCACAGCT
GGACGATCTCTCGACTGGCTTGCCCCTGGTGGAGTTGCAGCAGGTGGATGAGCTCCTCGAGGACATGGGCTTCACCGATA
TGCTGGCCAGGGCTCAACGTACAGGTGCTCCTAG---TCCTACATAGTGAGTTCGATAGAGGCTTCACCATATATGCATG
ACAAAGTTCAGGCAACACTATGCATGCT-----TATGCTGGGTATTTGTTTGTGATCTTAGTTTGGTAGTGGACGTATGT
GTCTGACCTGATTGTGCTCTGTTATTATGAAGTCTTGGAAAGAGAATTGGCAGTAGATGCAAAGCTCCAACATGGTAATT
AGGTCTTACTAAATTTGCAATGTCAATTAAGTTGGTCTTGCAAGGTTTTAGGTTTGTA-ATGTTGAATTCAGCAGGAAAA
TTTAGTGAGATGTGTAACCGACACCACAGACCGACAGCAACAGATCATGGCT-AAGCACATGTTGCATAAACGCGCCTAA
TTTCACCACGTCGGTGCAGTAAACATACTGAGATGGTCTAGATGAAGAGATAATAATTTATAT------CATCATCATTA
CTCGGATGGGATTAATGGTTGGGCTCACAGATATGAGATACAGAGCTGGGTGATAAACAAACGTTGTGATTTTAGCTGGT
TCAGAATGCTGATTTCTACATACATGCTCATAATTCTCTAG---------------------------------------
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---------------------------------------------------AACTTTTAGAAGAAAGTGAAACAAAATTA
GTAATTTCAGATAGAAACTACCTTTTGGCCTTGTTCAGTGCCCTGTAACTAATCAGAACCTTGACATCTAATATAGTTAT
CTCCAATTCTTCATGCATGACTTGTAAC---TTTTATTTATTTATTCAAAAAGAGGGGAAAC------CCTTGGCCTCTG
CATCGAGTGATGCACGCTGCCCTTGATTTCCTTTTTATGGTTGATGATCTGGCTTTATTACAACCTGATATGTGCACCAT
TTTGGAACTCTGATATCCATGTTAT-----------TGTGAAGAACAAGAAGCTA-------------------------
----------------------------------------------------------GA----TGCCAGTGGTTGGTTT
CACTAAACCTTACTTCAACTATG-TAAGTTACTAGATCAGCAGCTGCATGTTCATTGCCTATAGTATTGTTATGTTCTTT
AGATTGGACCGTGCCAATCAATCTTCATCT-AGACCCTGTCCAGAATACCTCCCTTGGCCGTTGAGCAC-----------
----TTTTTCTGAATTGTTGCGTTTTTCTGTTATGTGAAACCTTTGATGGTAAAGGCTGGCCGTAGGCAGACTAAAAGGA
TTAACTTTGCATTTTTCTTAGTTTTTCCGAATTATTGTGTTTCC----AAGTGTGAAACCTTTGATGGAAAAAAGC-AAG
CAATAGGCAGAGTCAGGATTAACTTTGTGTTTTCCTTTCCAGTACTTCATCTTGAGTACGATGTGATCCTT
>chr7D_1
GGCGTTGAGGTCGATGGGCGCGGGCATGG------A-GGCGCCACCACCCTCACCTCGGGGGAGCGTTCACCGGAGAGTC
GGGAGGCTTGTGGGTAGACGTGGAAGCCGGGAATCGGCTGCGTCGCCGACGCGCGGGGCGAGTCGGGCAGCACCATCCGA
GGAAACGCAGATGAGCCGGTGTTGGCCGCGGCCACGGCATCGTTGACAAGGCCGTGCTGCCCAGGGTTTAACCCTAGGTA
CATCAGCGTCTCCCTCGTTGCCGCCGCGACGCGGGCGTTGGTGGCCTCCTACTGCGCGGCGTCCATCGCGATGGC-----
----------TTCCTCCATTGCATCTGCTGCGTGCCTCCGGCCCTTTCTCTTCGCCGACTCCCTTAACCGCTCCTCGGGC
GTCAGCTTCTTCTTCGGCTTGGGCGTGGCGGCGGTCTTGCGGGGGGCGCGAGGCTTGCCTTTGCC---GGA-GGGG-CGG
TCGTGATGCCCGACGAGGCGAGGGAGGCAAGGCTGGCGGCGGCATCAAGGTCGTCGTCCATGGCGAG-CGGCGGGAG--C
GCGCAGGCGGGAGGGTTTTGG-----------------------------------------------------------
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>chr3D_1
GGCGTTGAGGTCGATGGGCGCGGGCGTGG------AAGGCGCCACCACGCTCACCTTGGGGGAGCGTTCCCCGGAGAGTC
GGGAGGCTTGCGGGTAGACGTGGAAGCCGGACATCGGTTGCGTCGCCAACGCGCGGGGCGACTCGGGCAGCACCATCCGA
GGAAACGCAGATGAGCCGGTGCTGGCCACGGCCACGGCGGCGTTGATTAGGCCGTGCTGACCAGGGTTTAACCCTAGGTA
CATCAGCGCCTCCCTCGTTGCCGCCGTGACGCGGGCGTTGGTGGCCTCCTGTTGCGCGGCAGC---GGCGATGGAGGCCG
CCGCGATGGCTTCCTC---TCCGCCCGCCGCGTGCCTCCGACCCTTTCTCTTCGCTGACTCCCTTGCCCGCTCCC--GCC
GTCAGCTTCTTCTTCGGCTTGGTCGCGGCGGCGGTCTTGTGGGGGGCGCGAGGCTTGCCTTTGCC---GGA-GGGGGCGG
TCGTGATGCCGGACGA---------GGCGAGGCCGGCGGCGGCATCGAGGTCGTCGTCCATGGCGAGGCGGCGGGAGCGC
GTGCGGGCGGGAAGGTTTTGGGAAAATGGAGGGAAATGGTGGAGGGGCTGCCACCGACTGGCGGGCCAGGGG--------
------------------------------------------GAGGAGTAGGCGGGTGCCGCGCGCGTCCGCCTCGTGTC
CGCGCCGACGCAAATGAAGCTAAAAAATAGGCCGAAAATGGGTCGGCAGGCCGATGAAAAGCGGACGCGCGTTCGTTTGG
GTCGGCGCGTTGGGCCGACTTTTCTGTCCGCGTCGACCCAAACGGACGCGCGCGGACGAAATGGGTCGGCGCGTTGGAGT
TGCTCT--------------------------------------------------------------------------
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>chr3D_1
GGCGTTGAGGTCGATAGGCGCGGGCGTGGGCGTCGAAGGTGCCACCACGCTCACCTCGTGTGAGCACTCCCCGGAGAATC
GGGAGGCCTACGGGTAGACGTGGAAGCCGGGCGTCGGGGTGCAAGCCGACGCGCGGGGCGAGTCGGGCAGCACCTTCA-A
GGAAAGGCGGATGAGCCGGTGCTGGCCGCGGCCACAGCGGCGTTGACGAGGCCGTGCTGGCCAGGGTTTAACCCTAGGTA
CATCAGCGCCTCCCTCGTTGCCGCCGCGACGCGGGCGTTGGTGGCCTCCTGCTGCGCGGCGGC---GGCGATGGC-----
----------TTCCTCCCTTGCGTCCGCCGCGTGCCTCCAGCCCTTTCTCTTTGCCGACTCCCTTGCCCGCTCGTCGGCC
GTCAGCTTCTTCTTCGGCTTGGGCGCGGCGGCGGTATTACGGGGGGCGCGAGGCTTCCCTTTGCC---GGA-GGGGGCGG
CTGTGATGCCGGAC---------AAGGCAAGGCCCGCGGCGGCATCGAGGTCGGCGTCCATGGCGAG-CGGCGGGAGCGC
GCGCGGGCGGGAGGGTTTTGGG-------------------------------------------------GGAAAATGG
AGGGAAATGGTGGATGGTGCTACCGACCAGCGAGCCAGGGGGGAGGAGTAGGCGGGCG-CGCGCGCATCCGTCTCATGTC
CGCACCGACGCAAATTCGGCTAAAAAATGGGCCGGGAATGGGTCGGCAGGCGGACGTAAAGCGGACGCGCATTCGTTTGG
GTTGGCGCGTTGGGCCGACTTTTCTGTCCGCGCCGACCCAAAGGGACGCGCGTGGACGAAATGGGTCGCCGCGTTGGAGT
TGCTCTAA------------------------------------------------------------------------
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>chr4D_8
-------AGGTCGATGGGCGCGGGCGTGG------AAGGTGCCACCACGCTCACCTC-GGGGAGCATTCCCCGGAGAGTC
GGGAGGTTTGCGGGTAGACGTGGAAGTCGGGCATCGGCTGTGTCGCCAACGCGCGGGGCGACTCAGCCAGCCCCATCTGA
GGAAACGCAGATGAGCCGGTGCTGGCCGCGGGCACGGCGGCATTGACGAGGCCGTGCTGGCCAGGGTTTAACCCTAGGTA
AATCAACGCCTCCCTCGTTGCCGCCGCGACGCGGGCGTTGGTGGCCTCCTGCTGCGCGGCGGC---GGCGATGGCGGCCG
CCGCGCTAGCTTCGTCCCTTGCATCCGCCGCGTGCCTCCGTCCCTTTCTCTTCACCGGCTCCCTTGTCCGCTCGTCGGGC
GTCAGCTTCTTCTTCGGCTTGGGCACGACGGCGGTCTTGCGGGGGGCGCGAGGTTTGCCTTGGCC---GG---GGC-CGG
CCGTGATGCCGGATGAGGCAAGGGAGGCGAGGCCGCCGGCGGCATCGAGGTCGTCGTCCATGGCGAG-CGACGGGAGCGC
GCGCGGGCGGGAGGGTTTTGGG-------------------------------------------------G--------
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>chr4D_14
-------------ATGGGCGCGGGCATGG------AAGGCGCCACCACGCTTACCTGGGGGGAGCATTCCCCGGAGAGTC
GGGAGGCTTGCAGGTAGACATCGAAGTCGGGCATCGGCTGCGTCGCTGACGCGCGGGGCGACTCGGGCAGCACCATCCGA
GGAAACACAGATGAGCCGGTGCTGGCCGCGGCCACGACGGCGTTGACGAGGCCGTGCTGGCCAGGGTTTAACCCTAGGTA
CATCAGCGCCTCCCTTGTTACCGCCACAACGCGGGCGTTCGTGGCCTCCTGCTGTGCGGCGGT---GGCGATGGCGGCCG
CCGCGATGGCTTCCTCCCTTGCGTC--------------GGCCCTTTCTCTTCGCTGACTCCCTTGCCCGCTCCTCGGGC
ATCAGCTTCTTCTTCGGCTTGGGCGCGGCGGCGATCTTGCGGGGGGCACGACACTTGCTTTTGCC---TTA-GGGG--GG
TCGTGATGCCGGACGAGGCGAGGAAGGCGAGGCCGGTGGCGGTATCGAGGTCGTCGTCCATGGCGGG-CGGCGGA-GCGC
ACGCGGGCGGGAGGATTTTGGG----------------------------------------------------------
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>chr4D_15
--------------TGGGGGCGGGTGTGG------AAGGCGCCACCACGCTCACCTCCGGGGAGTGTTCCCTAGAGAGTC
GGGAGGCTTGCGGGTAGACGTGGAAGCCGGGCATCGACTGCATTGCCGACGCGCGGGGCGACTCGGACTGCACCATCCGG
GGAAACGCAGATGAGTTGATGCTGGCCGCGGCCACGGCGGCGTTGACGAGGCCGTGCTGGCCAGGGTTTAACCCTAGGTA
CATCGGCGCCTCCCTTTTTGCCACCGCGACGTGGGTGTTGGTGGCCTCCTGCTGCGCGGCGGC---GGCGATGGCGGCCG
CCGCGATGGCTTCCTTCCTTGCGTCCGTCGCGTGCCTCCGGCCCTTTCTCTTCGCCGACTCCCTTGCCCGCTCCTCGGGC
GTCAGCTTCTTCTTCGGCTTGGGCGCGGCGGCGGTCTTGCGGGGGGCGTGAGGCTTGCCTTTGCC---GGA-GGGGGCGG
TCGTGATGCCGGACGAGGCGAGGAAGGCGAGGCCGGCGGCGGCATCGAGGTCGTCGTCCATGGCGGG-CGGCGGGAGCGC
GCGCGGGCGGGAGGGTATTTGG----------------------------------------------------------
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>chr3D_16
---------------GGGCGCGGGTGTGG------AAGGCGCCACCACGCTCACCTCCCGCGAGCATTCCCCGGAGAGTT
GGGAGGCTTGCGGGTAGATGTGGAAGCCAGGAATCGGGTGCGTCGCCGACGCGCGAGGCGACTCTGGCAGCACCATCCGA
GGAAACACGGACGAGCTGGTGCTGGCCACGGCCACGGCGGCGTTGACGAGCCCGAGCTAGCCAGGGTTTAACCCTAGGTA
GATCAGGGCCTCCCACGTTGCCGCCGCGACGCGGGCGTTGGTTTCCTCCTGCTGCGCGGCGGC---GGCGACGGCT----
--------GCTTCATCCCTTGCGTCTGCCGCATGCCTTTGACCCTTCCTCTTCACCAACTCCGCAGCCCGCTCCTCGGGC
GTCAGTTGCTTCTTCTTCTTGGGCGCGGCGGCGGTCTTGCGGGGG-CGCGGGGCTTGCCTTTGCCCAAGG---GGG-CGG
AAGTGATGCCGGACGACGCGAGGGAGGCGAGGCCGTCCGCGACATCGAGGGCGTCGTCCATGGCGAG-TGGCTGG-GAGC
GGGCAGTCGGGAGGGTTTTGGG----------------------------------------------------------
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>chr6A_969
CTGCCTCC------------------------------------------------------------------------
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------------------------------------------------------------------CTAAAACCCCAGGA
ACCCGACGACGTGCTCCCTCCCTCTCGGGCCGGTGCTCTGATGGCGGTGGAGCACGATGAGGCCGCGGC------CTCGG
TCACGGCCAGCAGGAAGAAGCGGGCGGCGTCCAGGCCGGCCTCCAACGGAGGGGAGGCGACGGCTTGCCCGGGCTCCTCG
TCGCGACCCCGCGCCGTGCACCGGATGCGCCCCGGGAAGCACACGGTGCAGATCAGGGTCCCGGGGCAGCAGCAATCCGC
CGGTGAGGCTGCCGGAGCGTACGGCGCGGCGGCCATCAGGCTGCACGCCGCGGCCGCGAAGGCCAACCTCAAGCATCCTG
CGGCTGCTGTGACGAAGTCCCGGTCGGGGCTCTTCGGCGTGCACGGGACCCCGAGCGGAGAGCACGGGGCGCAGATCTGG
CCCTGCATCGCCGCCGAGGAGGCCGCCCGAGCGGGCGAGGCGGC---------------------GGCCGTCGGGCTGCA
CCGCGCGACGGCGGCCTTCACCGACTCCATCCAGCACGGGGACGACGGGGACGCGCCGCTCCTGCGCGTCTCCTGCGAGG
GCGAGGCGCCGGGGAACGCCGAGAGGAATAAGAAGAAGCGGGCCGCGCCCAGGTCGGGGTTCCGCGGCGTGTACCGGCAT
CCCCGGAGCGGCAGGTACTCCGCGCAGATCCGGGACCCGGAGCGGCGAGCCAAGCAGTTCTGGCTCGGCAGCTTCGCCAC
GGGCGAGGAGGCCGCGAGAGCCTATGAAGTGGCGGCTGTCATGCTGTACGGCGACAAGGCCGTGACCAATTACGAGCAAC
CACCCACGGCCGCCATCGGCGGCGAGGAGTCGCCCATGGACCTCTTCCCGGAGCTGCGCTCGAACATTCAGGCCTGGAGG
AAGGCATTGGGCGCTCGGTCGAGGCACGCCGGCGTGTACCCGTTTCACGGGGAGTACTCGGCGCAGATCTGGGACCCGGT
GCGGCGAGCTGACCAGGGGCTCGGCAGCTTCGGCGCCGCTGAGGAGACCGCCGGAGCATACGACGCAGCGGCTGTCAGGA
TGCACGGCGCGGCGGCCGAAACCAACTTCAAGCAACCACCACGCTCGGCCGCTGCTGCGGATGACGGTGAGGTGTCGGCC
ATGGACCTCAACGACTTCCTGGAG------ATGCCGGCGCTCGACTTCTTCCCTGACAGCACCACCCCAGATGCACAGCT
CGACGATCTCTCGACTGGCTTGCCCCTGGTGGAGTTGCAGCAGGTGGATGAGCTCCTCAAGGACATGGGCTTCACAGACA
TGGTGGCCAGGGCTTAACGTACAGGTGCTCCTAGTCCTCCTACATAGTGAGTTTGATAGTGGCTTCACCATATATGCATG
ACAAAGTTCAGGCAACACTATGCATGCTATGCTTGGTA-------TTGTTTGTGATGTTAGTTTGGTAGTGGACGTATGT
GTCTGACCTGATTGTGCTCTGTTACCATGAAGTCTTGGATAGAGAATTGACAGTAGATGCAAAGCTCCAACATGGTAATT
AGGTCTTACTAAATATGCAATGTCAGTTAAGTTGGTCTTAGAAGGTTTTAGGTTTGTA-CTGTTGAATTCAGCAGGAAAA
TTTGGTGACATGTGTAACCGACACCACAGACCAACAGCAACAGATCATGGCTAAAGCACATGTTGCATAAACGCGCCTAA
TTTCACCATGTCGGTGCAGTAAACATACTGAGATGGTCTAGATGAAGAGATAATAATTG----AAAATATATCATCATTA
CTCAGATGGGATTAATGGTTGGGTTCACAGATATGAGATACAGAGCTGGGTGATAAACAAACGTTGTGATTTTAGCTGGT
TCAGAATGCTGGTTTCTACATACATTTTTTTTGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTTTTAGAAGAAAGTGAAACAAATTTA
GTAATTTCAGATAGAAACTACCTTTTGGCCTTGTTCAGTGCCCTGTATCTAATCAGAACCTTGACATCTAATATAGTTAT
CTCCAATTCTTCATGCATCACTTGGTTTCCATTTTATTTATTTTCGCGAAAAGTGGAGAAACCCTTGGCCT------CTG
CATCGAGTGATGCACACAGCCCTTGGTTTCCGTTTTATGGT---TGATCTAGCTTTATTATAACCTGATTTGTGCACCAT
TTTGGAACTCTGATATCCATGTTATGTACATGGTATTGTGAAGAACAAGAAGCTA-------------------------
----------------------------------------------------------GGAACGTGCTAGTGGTTGG-TT
AACTAAACCTTACTTCATCTCATATAAGTTACTAGATCAGCAGGTGCCTGTTCGTTACCTATAGTATTGTTATGTTCTTT
AGGTTGGACCGTGCCAATCAATCTTCAGCTAAGACCCTGTCCAGAATACCTCCCTTGGCCGTTGAGCAGTTTATAATTCA
GGAGTTTTTCCGTATTATTGCATTTGCATGTCATGAGAAGACTTTGATGGTAAAGGCTGGCCGTAGGCAGGCT--CACGA
TTAACTTTGTGTTTTTCTTATTTTTTCTGAATTATCGTGTTTCGAAGTAAGTGTGAAACCTTTGATGGAAAAAGGCAAAG
CAATAGGCAGAGTCAGGATTGACTTTGTGTTTTCCATTCCAGTACTTCATCCTTGA---------------
>chr6D_972
---CCTCC------------------------------------------------------------------------
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------------------------------------------------------------------CTAAAACCCCATGA
ACCCGTCGACGTGCTCCTTCCCTCTCGAACCGGTGCTCTGATGGCGGTGGAGCACGATGAGGCCGTGGC------TTCGG
TCACGGCCAGCAGGAGGAAGCGGGCGGCGTCCAGGCCGGCCTCCGATGGAGGGGAGGCGACGGCCTGTCCGGGCTCCTCG
TCGCGATGCCGCGGCGTGCACCGGATGCGCCCCGGGAAGCACACGGTGCAGATCAGGGTCCCGGGGCAGCAACAAGCCAC
CGGGGAGGTTGCCAGAGCGCACGGCGCGGCGGCCATCAGGCTGCACGCCGCGGCCACGAAGACCAACCTCAAGCATCCCG
CGGCTGCTGCGACGGAGCGTCGGCCGGGGCTCTTCGGCGTGCACGGGACCCCGAGCGGAGAGCACGGGGCGCAGATCTGG
TCCTGCGCAGCCGCCGAGG---------------------CGGC---------------------GGCCGTCGGGCTGCA
CGGCGCGGCGGCGGCCTTCACCGACTCCAACCAGCAAGGCGATGATGGGGACGCGCCGCTCCTGCGCGTCTCCTGCGAGG
GCGAGGCGCCGGGGAATGCCGAGAGGAATAAGAAGAAGCGGGCCGCGCCCAGGTCGGGGTTCCGCGGCGTGTACCTGCAT
CCCCGGAGCGGCAGGTACTCTGCGCAGATCCGGGACCCGGAGCGGCGAGCCAAGCTGTTCTGGCTCGGCAGCTTCGCCAC
GGGCGAGGAGGCCGCGAGAGCCTATGACGCGGCGGCTGTCACGCTGTACGGCGCCAAGGCCGTAACCAACTACGAGCAGC
CACCCACGGCCGGCATCGACGGCGAGGAGTCGCCCATGGACCTCTTCCCGGAGCTGCGCTCGAACATTCAGGCCTGGAGG
AAGGCATTGAGCGCTCGATCGAGGCACGCCGGCGTGCACCCGTATCGCGGGGAGTACTCGGCGCAGATCTGGGACCCGGT
GCGGCGAGCTGACCAGGGGCTCGGCAGCTTCGGCGCCGCCGAGGAGACCGCCGGAGCATACGACGCAGCGGCTGTCAGGA
TGCACGGCGCGGCGGCCGAAACCAACCTCAAGCAACCACCACGCTCGGCCGCCGCTGCGGATGACGGTGAGGTGTCGGGC
ATGGACCTCAACGACTTCCTGGAG------CTGGCGGCGCTCGATTTCTTCCCTGAGAGCATCAGCCCAGGTGCACAGCT
CGACGATCCCTCGACTGGCTTGCCCCTGGTGGAGTTGCAGCAGGTGGATGAGCTCCTCAAGGACATGGGCTTCACCGATA
TGGTGGC------TTAACAGACAGGTGCTT---------CTACATAGTGAGTTTGATAGTGCCTTCACCATATATGAATG
ACAAAGTTCAGGCAACACTATGCATGCT-----TGGTA-------TTGTTTGTGATCCTAGTTTGATAGTGGACGTCTGG
GGCTAACCTGATTGTGCTCTGTTATTATCAAGTCTTGAAAAGAGAATTGACAGTAGATGTAAAGCTCCAACATGGTAATT
AGGTCTTACTAAATTTGCAGTGTCAATTAGTTTAGTCTTACAAGGTTTTAGGTTTGTAAATGTTGAATTCAGCAGGAAAA
TTAG-------------CCGACACCACAGGCCGATGGCAACAGATCATGGCTAA-GCGCATGTTGCATAAACGCCCCTAA
TTTTGCCATGTCAGTACAGTACACATACTGAGACGGTCTAGATGAAGAGATAATAGTTGAAAAAAAAAACATCACAATTA
CTCAGATGGGA-TAATGGCTGGGCTCACAGATATGAGATATAGAGCTGGGTAATAAACAAACATTCTGATTTTAGCTGGT
TCAGAATGTTGGTTTCACTCTCATAATCG-------TCTAG---------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------AACTGTTAGAAGAAGGTGAAGCAGAATTA
GTAATTTCAGATAGAAACTACCTTTTGGCCTTTTTCAGTGCCCTGTATCGAATCAGAGCCTTGACATCTAATATAGTTAT
CTA-AATACTTGATGCATAACTTGGTTAACATTTTATTTATTTATTCAAAAAGAGGGGAAAC------CCT------CTG
CATCGAGTGATGCACGCAGGCCCTGATTTCCTTTTTATGGTTGATGATCTGGATTTATTATAACCTGATTTGTGCACCAT
TTTGGAACTCTGATATCCTTGTTATGTACATGGTATTGTGAAGAACAAGAAGCTACTCCCTCTGTCCCAGAATATAAGAA
CGTTTTTGACACTATGCTAGTGTTAAAAACGTTCTTATATTTTGGGACGGAGGGAGTAGA----TGCCAGTGGTTGGTTT
AACTAAACCTTATTTCAACTATG-TAAGTTACTAGATCAGCAGCTGCATGTTCATTGTCTGTAGTATTGTTATGTCCTTT
AGATTGGACCGTGCCAATCAATCTTCATCT-AGACCCTATCGAGAATACCTCCCTTGGCCGTTGAGCAC-----------
----TTTTTCCAAATTGTTGCATTTTCGTGTTGTGTGAAACCTTTGATGGTAAAGGCTGGCCGTAGGTAGACT--AAGGA
TTAACTTTGCGTTTTTCTTAGTTTTTCCGAATTATCGTGTTTCC----AAGTGTGAAACCTTTGATGGAAAAAAGC-AAG
CAATAGGCAGAGTCAGGATTAACTTTGTGTTTTCCCTTCCAGTACTTCATCTTGACTGCGATGTGATCCTT
>SNPs
-----------S------------------------------S-S-----------------------S-----------
-----S---------------------------S----------S-----S-----------S-----------------
-S----------------------------S------------------S------------------------------
------------------------S----------------------------------S-----------------S--
S----------------------------SS--------------------------------------------S----
----S------S-------------------------------------------------S------S--S-----S-S
--------S-------------------------SS--------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------S-------S-S-------S-----S---S-----------------S----S-----S-
S----------S----------------S-------S-----SS------------SS----------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
---------------S-----------------------------------------------------SSSSSS-----
----------------------------------------------------------------------------S---
---------S----------------------------------------------------------------------
-------------------------------------------------------------------SS-----------
----------------------S----------------S----------------------------------------
---S-----S------------------------------S---SSSSSSSSSSSSSSSSSSSSS----S--S-------
----S--------------------S------------------------------------------------------
----------------------S--S------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------------S---SS--------------------------------------------------
---S---S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---S--------------------------------------------------------------------------
---S------------------------------------S-------S-------------------------------
------------------------SSSSSS------------------S-------------------------------
S---------------------------------------------------------S---------------------
--S-----------S--------------------------------------S-----S--------------------
----------------------------------SSSSSSSSSSS-----------------------------------
-------------------------------------------------S------------------------------
---------------------------------------S----------------------------------------
---S----S-----------------------------------------------------------------------
--------S-------------------------------------------------S-S-S-----------------
---S----------------------------------------------------------------------------
-----------S-------------SS-SS-SSSSS--------------------------------------------
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-----------------------------------------------S--------------------------------
------------------S-----SSSS-------------------------------------------SSSSSS---
-----------------S------------------------------------------S--------S----------
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S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S----------S----SS---------------------------------------------SS-----
----------S------------------------S--------------------------------------------
-----------------------------------S-------------------S-S-------------
>forward_963
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---------------------------------------------------------------CTGGGAATAACTGCCGT
GGT-----------------------------------------------------------------------------
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>reverse_2321
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GGACGATCTCTCGACTGGCT------------------------------------------------------------
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-----------------------------------------------------------------------
>forward_2201
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---------------------CCAACTTCAAGCAACCACCG---------------------------------------
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-----------------------------------------------------------------------
>reverse_3833
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------------------------------------------------------------------------GGCCTCTG
CATCGAGTGATG--------------------------------------------------------------------
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-----------------------------------------------------------------------
