>input_sequence_49589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGCCCTGTTCTTTCTTGCTTTCAGAATTTCCATTCAAC
AGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGGTCAGAAAAGCAAAAGATGA
TGCTATAAGCCCATCTGACAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTAAAACAT
AGCCATAAATAATTTATTTTCTATTTGGCTGGGCGGTTGCTCAGGGTTTAAGTTATGGTACAAGTTTTTTTCTCTCAAGT
GCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCCGAATCTTATGGCAATGCACTTTTCTATGCAATACAGTAAACGTT
TCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTTATAC------CTATTTGCAGTTCATTATGAAGGGACACT
TGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTACATTTGAAGTTGGCCAGGGAGCTGTCA
TTAAAGCATGGGACATAGCCTTAAGAACTATGAAAGTATGTGAACGCTTATAATTGCTTGCTCACTTTGATAGCCTCGAA
AGTTTCTTTCTAATATGGCATGGTGCATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCCGGAATA
TGCGTATGGAAGTCCAGGCTCGCCACCAGAGATACCAGCCAAGTTTGTTTGCCATTTCACCTCTTGATTGACTGAAGTTG
TAAGCATCCCCAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGTGGAATT
AGTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACATCTCCA
AGTGTTTCCTCTTTTATATTTATTAATGCATCAAGTACCCAATAATCAGACGGTGGTCAACAAAATACTCAATGAAGCTG
ATCTGTGGAGGTTGGCAGTTGGCAGGGAGCTAAGGAATTGAGAACTCTGCCTCTGAATGCTCGTCCACCCCATAACATCT
CTAG----CCATAGC-TTTTTTAATCCTCCATTTTTAAGAGTTTTTGTCCTTTTTTTTCTGTTTC-ATGGGGATGGTGGA
GCTTTTGCTGTTTTTTTGGTCAGTAGTACTGTTAAGCCAGTTTTGGCAC-TTTTTTCTAATACAAAAATTAGTACCCAAT
AATCATGTTAAACAGCATTGGACATCATATTGGAATTAAATAATAGAT--------------------------------
---------------TTGAGAACTACGTATCATGCCTATTATCCATTTTGTAGTACCCTTGTGATTGTTAAAAAAATACA
TGATTTTTGATACATAAATTTCGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCAGCTGCCACCAAAGAGGAAGAGAAGA
AGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGAAAAGGA
AAGGGCAAATAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_1_TraesCS1B01G292400
TTCTGATATTTTTCAAAGAGAATGTTTAGTTTTTGATACTTTGCACAAAAGATATTGAGTCTATACAACATAAAAAAAAA
CTAAAGATTTTACATTA-TTTTTAATAAAGAAACAAAGGTTTTTTAATGCCCACAATTTTT----------TTTTTCTTT
GGAAGGAGAATATTACAGTCCGTAGTAGTGACGACCGAATCGAATCGAATCGACGAAGGGCATCCTCCGGTAAAAATCAC
GCGAAACCATCCTCTGATTCCCCCTTCCCCTCGTCCCATCCAGATCTGTCTATCATCGTCGCTCCCTCCACTCTGAATTC
CCCTCCCCTTCTCTCGGTGAAGGTACGTGCCGCCCGC--------ATCCATCTCCCTCCTCTCGGCTCACC-CTTCTAAT
CCCAACACCACACCCATCCGTTCAGCAGGTCCTCACCGGCGCCCCCGCTGCCACGGCTCTCTCTCCAAATCGTCGCCGAT
CCGAGGTAAATTCTACTTCCTTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTTAGGTCT
CCAATACTTGAGCACAGTTTCAGTTCAGGTTGTGCCATGCGGTAGTG-CTTGAGGAAGATTGCAGTTGC-TCTAGGTTCG
GCTTTAAGCCTGTAGGTTGTTGATCTGGGAGGGGCAACACAATT-AACTTT--TAGGTTACATAAATGCATACTGGGAGA
AGATCT--------------AAGTAGGGCCGCCCTATCACCTATTGGAATTGTTTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TGTAACTCAGCTGTTGGAATTGGGTTATT
TGTGAGACTGGTA--CTGTGTTTTTCATTTTTGTTTTGATGAG-AAAAACGGTTATAGAGTCTACTTGAGTATTC-----
-----------------------------------CTTCGGTCGCACTGCCTACCCTAAGGCTGAAACCTTTTATTTTAA
AACTGGCTTCAAATTTAATTGAAAGAATTTAGATAAGTGAAGGAACTGACTATG-----CATTTTCAAGTGCTTGTACCC
ACTAGTTTGATCAAATTTGGTTTTGCTAGAGCACTCTAATAATGCCCTGTTCTTTCTTGCTTTCAGAATTTCCATTCAAC
AGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGGTCAGAAAAGCAAAAGATGA
TGCTATAAGCCCATCTGACAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTAAAACAT
AGCCATAAATAATTTATTTTCTATTTGGCTGGGCGGTTGCTCAGGGTTTAAGTTATGGTACAAGTTTTTTTCTCTCAAGT
GCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCCGAATCTTATGGCAATGCACTTTTCTATGCAATACAGTAAACGTT
TCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTTATAC------CTATTTGCAGTTCATTATGAAGGGACACT
TGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTACATTTGAAGTTGGCCAGGGAGCTGTCA
TTAAAGCATGGGACATAGCCTTAAGAACTATGAAAGTATGTGAACGCTTATAATTGCTTGCTCACTTTGATAGCCTCGAA
AGTTTCTTTCTAATATGGCATGGTGCATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCCGGAATA
TGCGTATGGAAGTCCAGGCTCGCCACCAGAGATACCAGCCAAGTTTGTTTGCCATTTCACCTCTTGATTGACTGAAGTTG
TAAGCATCCCCAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGTGGAATT
AGTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACATCTCCA
AGTGTTTCCTCTTTTATATTTATTAATGCATCAAGTACCCAATAATCAGACGGTGGTCAACAAAATACTCAATGAAGCTG
ATCTGTGGAGGTTGGCAGTTGGCAGGGAGCTAAGGAATTGAGAACTCTGCCTCTGAATGCTCGTCCACCCCATAACATCT
CTAG----CCATAGC-TTTTTTAATCCTCCATTTTTAAGAGTTTTTGTCCTTTTTTTTCTGTTTC-ATGGGGATGGTGGA
GCTTTTGCTGTTTTTTTGGTCAGTAGTACTGTTAAGCCAGTTTTGGCAC-TTTTTTCTAATACAAAAATTAGTACCCAAT
AATCATGTTAAACAGCATTGGACATCATATTGGAATTAAATAATAGAT--------------------------------
---------------TTGAGAACTACGTATCATGCCTATTATCCATTTTGTAGTACCCTTGTGATTGTTAAAAAAATACA
TGATTTTTGATACATAAATTTCGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCAGCTGCCACCAAAGAGGAAGAGAAGA
AGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGAAAAGGA
AAGGGCAAATAGATTACTCCCAACTGATGTATTAGTAGTTGCATTTGCTGCTGAGTGCCGACTGTTGTAACC--------
-----------------------------------------TACTCCCTCCGTCGCATAAAAGAAAACATCTTACATTGT
GGGACGAAGTAGTACGGAGTATAAATTAATCTGCACAAAGCATCAGACTGCGAGAAGATTGCTTGTTGGCTACTGTGCTT
TGGGGGATGC-------CGTATGCTGCCCAGCACCAGCCTTACTGAAAACATTAAATAATCACAGCAAACTTCTCTTGGT
TTTTACACAAGATGTGAAATGTCACCACTTCTGA-CGAGTCATTTTTACTGCACAGCAATGACATTTCCATGTCTGAGAT
AATGTAATTGCAGATGAGTGTATACAGCAAATGTGGCATTTACTTCTGAACAGGCGTGCATCTCAGTCTCTGCAAAATTT
GCTTTGATATGCTTTTGCTTCCGAACACAGCATGTACATTCACTTTACAACAC-AAGGGTTAAACTTTTTGTGTACAAAC
ACAGCTGAGACCGGATTATGAGCTGAGGCAGCAGTCATCTTCCTCGTACCGGAAATACGACCATCTCAAAACGGAACCCT
GGAGAGGTGTAAATACTTCTGGATCCGCATGTATCTTTTCTCATATCTTACATTTGAGGGTTTTAAGAAGTATCCGCTAA
CCTGTTACAATCCGAAATGGCTCAGAAATTGTACACTTTGGGCACTTGAATAGGAATATCAATCCCCTTTTTCATATTAG
CAA-CTATGTACCTCAATGTGAATGTAATGCTATCTTTTGTAAATCACATGGCGGTGTAGATGGTAAAATATCATAGGAT
GCACGGAACCGTAGGCCACTGCCTGTATTGACTGATACTGGGCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGG
ATAAACAATCAGAAACATCAGAACATATAACACACGATGCTTTCGAGGGTTAAGAAAGCAACCAAGCAAACACGATTATA
GTTCGGGAAGCGGCACCGCGCAAGCCCGCAT
>chr1D_4
---TGATATATTTCGAAGAGAATGATTAGTTTTTTATAGTTTGCACAAAAGATATTGAGTCTATACAACATAAAAAACTA
G--AAAATTTTGCATTATTTTTTAATAAAGGAACAAAGGTTTTTTAATGCCCACAAAAAGTTTTTTTATTCTTTTTCTTT
GGAAGGAGAATACTACAGTCCGTAGTAGTGGCGAC-----CGAATCGAATCAACGGAGGGCATCCTCCGGTAAAAATCAC
GCGAAACCATCCTCTGATTCCCCCTCCCCCTCGTCCCATCCAGATCTGTCTATCATCGTCGCTCCCTCCACTCTGAATTC
CCCTCCCCTTCTCTCGGTGAAGGTACGTGCCGCCCGCCCGCCCGCATCCATCTTCCTCCTCTCCGCTCACCCCTTCTAAT
CCCAATACC-CACTCATCCGTTCAGCAGGTCCTCACCGGCGCCCCCGCTGCCACGGCCCTCTCTCCAAATCGTCGCCGAC
CCGAGGTAAATTCTACCTCCCTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTTAGGTCT
CGAATAGTTTAACACAGACTCAGTTCAGGTTGTGCCATGCGGTAGTTACTTGAAGAAGATTGCAGTTGCCTCTAGGTTCG
GCTTTAAGCCTGCAGGTTGTTGATCTGGGAGGGGCAGCACAAGT-AACTTTTATAGGTTACATAAATGCATACCGGGAGA
AGATCTCCTAAGGACATGCTAAGTAGGGCCGCGCTACCACTTATTGGAATTGTTTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TGTAACTCAGCTGTTGGAATTGGGTTATT
TGTGAGACTGGTACTCTGTGTTTTACATTTTTGTTTTGATGAGG-AAAACGGTTATAGAGTCTACTTGAGTGTTGTTCGA
TATACCTTCAATTCATTGACGATTGTCTCTGGGGCCCTTTGTCGCACTGCCAACCCGAAGTCTGAAACCTTG-ATTTTAA
AATTGGCTTCAAATTTAATTGCAAGAATTTAGACAAGTGCAGGAACTGACTATGTTATGCATTTTCAAGTGCTTGTGCCC
ATTAGTTTGATCGAATTTGGTTTTGCTAGAGCACTCTAATAATGCTCTGTTCTTTCTTGCTTTCAGAATCTCCGTTCAAC
AGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGATCAGAAAAGCAAAGGATGA
TGCTATAAGCCCATCCGATAGCCTTCCATTGGTTGATGGTACTGCAGTCAATACATAGCCCTCTGATCTGAGTAAAATAT
AGCCATAAATAATTTATTTTATATTTGACTGGGCGGTTGCTCATGGTTTAAGTTATGGTAGAAG-TTTTTTCTCTCAAGT
GCTTCCAACGTTTTTCCATTCGGCTACTTTGCCCCTGAATATTACGGCAATGCACTTTTCTATGCAATACAGTAAACGGA
TCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTCGTACACTTTTCTATGTGCAGTTCATTATGAAGGGACACT
TGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTTCATTTGAAGTTGGCCAGGGAGCTGTCA
TTAAAGCATGGGATATAGCCTTAAGAACTATGAAAGTATGTGAACGTTTATAATTGCTTGCTCAAATTGATAGCCTCGAA
AGTTTCTTTCTAATATGGCACGGTGTATCG-GCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCCGGAATA
TGCGTATGGAAGTCCAGGCTCGCCGCCAGAGATACCAGCGAAGTTTGTTTGCCATTTCACCTCTTGATTGACTGAAGTTG
TAAGCATCCCGAGGCCAGAAGTTTCTGTAACAAGGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGTGGAATT
AGTTGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACATCTCCA
AGTGTTTCCTCTTTTATATTTAAC---GCATCAAGTACCCAATAATCAGATGGTGGTCGACAAAATCCTCAATGAAGCTG
ATCTGTGGAGGTTGGCACTTGGCAGGGAGCTAAGGAGTTCAGAACTCGGCCTCTGAATGCTCGTCCACCCCATAACATCT
CTAGACAACCATAGC-TTTTTTAATCCTCCATTTTCAAGTGTTTTTGCCCTTTTTTTTCTGTTTCTATGGGGTTAGTGGA
GCTTTTGCTGTGTTTTTGGTCAGTAGTACAGTTAAGCCAGTTTTGGCATTTTTTTTCTAATACAGAAGTTAGTACCCAAT
AATTATGTTAAACAGCGTGGGACATCATATTGGAATT-------------------------------------------
--------------CTTGAGAGCTACGTATCATGTCTATTATCCATTTTGTAGCATCCTTGTGATTGTTAA-AAAGTACA
TGATTTTTTATGCATAAATTTTGATAGGGAGCTTAAGAAACAGCGGGAGCTGGCTGCTGCCACCAAAGAGGAAGAGAAGA
AGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGAAAAGGA
AAGGGCAAATAGATTACTCCCAACTGATGTATTAGTAGTTGCATTTGCTGCTGAGTGCCGACTGTTGTAACC--------
-----------------------------------------TAG------------------------------------
----------------------AAAATAATCTGCACGAAGCATCAGACTGCAAGAAGATTGCTTATTGGCTACTGTGCTT
TGGGGGATGCTACATGGCCTATGTTGCCCAGCACCAGCCGTACTGAAAACACTAAATAATTACAGCAATCTTCTCCTGGC
TTTTACACAAGATATGAAATGTCAACTCTTCTGACCGAGTCATTTTTACTGCACAGCAATGACATTTCCGTGTCT--GAT
AATGTAATTGCAGATG----TATACAGCACATGTGACATTTACTTCTGAACAGACGTGCA------TCTCAGCAAAATTT
GCTTTGATATGCTTTTGCTTCCGAACACAGCATGTACATTTACTTTACAACACGAAGGGTTAAGCTTTTTGTGTACAAAC
ACAGCTGAGACCGGATTATGAGCTGAGGCAGCAGTCATCTTCCTCATACTGGAAATACGACCATCTCAAAACGAAACCCT
GGAGAGGTGGAAATACTTCTGGATCCGGAGGCATCTTTTCTCATATCTTACATTTGAGGGTTTTAAGAAGTATCCGCTAA
CCTGTTACGATCCGAAATGGCTCAGAAATGGTATACTTTGGGCACTTGAATAGGAATATCAATCCCCTTTCTCATATTAG
CAA-CTATGTACCTCAATGTGAATGTAATGCTATCTTTTGTAAATCACATGGCGGTGTAGATGGTAAAATATCATATGAT
GCACGGAACCGTAGGCCATTGCCTGTATTGACTGATACTGGGCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGG
ATAAACAATCGGAAACATCAGAACATATAACACACGATGCTTTCCAGGGTTAAGAAAGCAACCAAGCAAACATGATTATA
GTTCGGGAAGCGGCACCGCGCAAGCCCGCAT
>chr1A_141
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTTTTCTTT
GGAAACGAGAATATACAGTCCGTGGTAGTGGCGAC-----CGAATCGAATCGACGGAGGGCATCC-----------TCAC
GCGAAACCATCCTCTGATTCCCCCTCCCC-TCGTCCCATCCAGATCTTTCTGTCATCGTTTCTCCCCCCACTCCGAA-TC
CCTCCCTCCTCTCTCTGTGAAGGTACGTGCCGCACGCCCGC----ATCCATCTTCCTCCTCTCCGCACACCCCTTCTAAT
CCCAACACCACACCCATCCGCTCAGCAGGTCCTCACCGACGTGCCCGCCGCCACGGCCCTCCCTCCAAATCGTCGCCGAC
CCGAGGTAAATTCTACCTCCTTTGCCTGATTTTGTCATGGACCTGTAGTAGATTTTGTTGCCGTGGAGGCCTTTAGGTCT
CGAATAGTTGAACACAGTCTCAGTTCAGGTTGTGCCATGCGGTAGTG-CTTGAGGAAGATTGCAGTTGCCTCTAGGTTCG
GCTTTAAGCCTGTAGGCTGTTGATCTGGGAGGGGGGCAACACAAAAACTTT--TAGGTTACATAAATGCGTGCTGGGAGA
AGATCTCTTAAGGACATGCTAAGTAGGGCCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACATTGTAACTCAGTTGTTGGAATTGGGTTATT
TGTGAGACTGGCA--CTGTATTTTACATTTTTGTTTTGATGAGGAAAAACGGTTATAGAGTCTACTTGAGTGTTGTTCGG
TACACCTTCAATTCACTGACGATTGTCTCTTGGGTCTTTTGTCGCGCTGCCAACCCTATGTCTGAAACCTTG-ATTTTAA
AACTAGCTTCAAATTTAATTGAAAGAATTTAGACAAGTGAAGGGGCTGACTATGTTATGCATTTTCAAGTGCTTGTGCCC
ATTAGTTTGACCAAATTTGGTTTTGCTAGAGCACTCTAATAATGCCCTGTTCTTTCTTGCTTTCAGAATCTCCGTTCAAC
AGCAAGGTCATGGCAGAAACCATAGATCTAACAGGGGATGGAGGCGTTCTTAAGACGGTGGTCAGAAAAGCAAAGGATGA
TGCTATAAGCCCATCTGATAGCCTTCCATTGGTTGATGGTACTGCAGTCAATCCATAGCCC-----TCTGAGTAAAACAT
AGCCTC-AATAATTTATTTTCTATTTGGCTGGGCGGTTGCTCAGGGTTTAAGTTATGGTACAAG-TTTTTTACCTCAAGT
GCTTCCAATGTTTTTCCATTCAGCTACTTTGCCCCCGAATCTTACGGCAATGCACTTTTCTATGCAATACAGTAAACGTT
TCACTGCTTAATCTGCCATGTTGGGTTAAACATTTGCCTTTATAC------CTATCTGCAGTTCATTATGAAGGGACACT
TGCTGAAAATGGCGAAGTTTTTGACACCACACATGAAGACAATTCTATTTTTTCATTTGAAGTTGGCCAGGGAGCTGTCA
TTAAAGCATGGGATATAGCCTTAAGAACTATGAAAGTATGTGAACGTTTATAATTGCTTGCTCACTTCGATAGCCTCGAA
AGTTTCTTTCTAATATGGCATGGTGTATCACGCATGTTGAAGGTTGGCGAGATTGCAAAAATAACATGCAGGCCGGAATA
TGCGTATGGAAGTCCAGGCTCGCCGCCAGAGATACCAGCGAAGTTTGTTTGCCATTTCACCTCTTGATTGACTGAAGTTG
TAAGCATCCCCAGGCCAGAAGTTTCTGTAACAACGTTTGCTTTGTTTCTGCAGTGCAACACTCATTTTTGAGGTGGAATT
ACTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGTAAGACATCTCCA
AGTGTTTCCTCTTTTATATTTAAC---GCATCAAGTACCCAATAATCAGACGATGGTCGACAAAATCCTCACTGAAGCTG
ATCTGTAGAGGTTGGCACTTGGCAGGGAGCTAAGGAGTTGAGAACTCTGCCTCTGAATGCTCGTCCACCCCATAACATCT
CTAGACAACCATAGCTTTGTTTAATCCTCCATTTTTAAGAGTTTTGTCC--TTTTTTTCTGTTTC-TATGGGGTAGTGGA
GCTTTTGCTGTGTTTTTGGTCAGTAGTACAGTTAAGCCAGTTTTGGCA-TTTTTTTCTAATACAGAAGTTAGTACCCAAT
AATCATGTTAAACAGCATGGGACATCATATTGGAATTACATAATATAGCATATAGCCTAGCTAATATTCTTGTTTACGCG
ATTTCTTGAGAACACTCGAGAGTTACGTGTCATGTCTATTATCCATTTTGTAATACCCTTGTGATTGTTAG-AAAGTACA
TGATTTTTGATACATAAATTTCGATAGGGAGCTTAAGAAACAGCGGGAGCTGTCTGCCGCCACCAAAGAGGAAGAGAAGA
AGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGAAAAGGA
AAGGGCAAATAGATTACTCCCAACTGATGTATTAGTCGTTGCATTTGCTGCTGAGTGCT-ACTGTTGTAACCTACTCCCT
CCGTCTCATCAAAAAACATTTTACATTATGGGATGTAGTAGTAG------------------------------------
----------------------AAAATAATCTGCACAAAGCATAGATTGCCTGTTGC----CTTGTTGGCTACTGTGCTT
CGGGGGAG-----ATGGCGTATGTTGCCCAGCACCAGCCTTACTGAAAACATTAAATAATCACAGCAATCTTCTCTTGGT
TTTTA-------------------------------------------CTGCGCAGCAATGACATTTCCATGTCT--GAT
AATGTAATTGCAGATG----TATACAGCACATGTGACATTTACTTCTGAACAGATGTGCA------TCTCAGCAAAATTT
GCTTTGATGTGCTTTCGCTTCCGAACACAGCATGTACATTTACTTTACAACAT-AAGGGTTAGACTTTTTGTGTACAAAC
ACAGCC-------GATTATGAGCTGAGGCAGCAGTCATCTTCCTCA--CCAGAAATACGACCATCTCAAAACAAAACCCT
GGAGAGGAAGAAATACTTCTGGATCCGCAGGTATCCTTTCTCATATCTTAAATTTGAGGGTTTTAAGAAGTATCCAG---
---------------AATGGCTCAGAAATGGTACACTTTGGGCACTTGAATAGGAATATCAATCCCCTTTCTCATATTAG
CAACCTATGTACCTCAATGTGAATGTAATGCTATCTTTTGTAAATCACATGGTGGTGTAGATGGTAAAATATCATACGAT
GCACGGAACCGTAGGCCATTGCCTGTATTGACTGATACTGGGCAGAGCCAGCAGAATATGCTACGCCCAAGCACCTGTGG
ATAAACAATCGGAAACATCAGAACATATAACACACGATGCTTTCCAGGGTTAAGAAAGCAAGCAAGCAAACATGATTATA
GTTCGGGAAGCGGCACCACGCAAGCCCACAT
>SNPs
SSS------S----S---------S---------S---S--------------------------------------SS-
SSS--S-----S------------------S-------------------------SSSS--------------------
------------S-----------------S----SSSSS---------------S------------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------S---------S----------------
---------------------------------------------------------S---------------------S
----------------S---------------------------------------------------------------
-S----S----S------S-------------------------------------------------------------
------------------------------------S-----S-------------------------------------
--------------------------------S---S---S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----------------------------------------------S--S-----
--------------------------------------SS-----------S--------S----------SS-------
---------------------------------S------------------------------------------S---
-S-------------------------------------------------------------------S---S------
--------------------------------------------------------------------------S-----
------------------S-------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------S-----------------------------------
-------------------------------------------------------S------------------------
----------------------------------------------------S---------------------------
-------------S--------------------------------S---------------------------------
-------------------------S------------------------------------------------------
------------------------S--------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSSSS-------------------------------S-------S-------------
-----------------S------------------S-------------------------------------------
-----------------------------------------------S------------------------S-S-----
-----------S-----------------S------------------S---------------S--S------------
------------------S-------------------S------S-S--------------------------------
---------------------S------------S------------------------------------S---S----
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---S-------------------------S----------------------------
-----------------------S--------------------------------------------S-----------
-------------S----------S-S------------------------------------------------SS---
----------------SSSS---------S-----S-----------------S------SSSSSS----S---------
----------------------------------------S---------------------------------------
---------------------------------------------S---------------------------S------
---------S-------------------S--------------------------------------------------
--------S--------------------S----------------------------------------S---------
----------------------------------------------------------------------------S---
------------------S-------------------------------------------------------------
----------S---------------------------------S---------------------------S-------
-------------------------------
>forward_198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TCCGTAGTAGTGACGACCGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTTGGCAGGGAGCTAAGGAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GAAGATCTAAGTAGGGCCGCC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCTGCCACCAAAGAGGAAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_2338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
ATCTGTGGAGGTTGGCAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_3334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GCGTGCATCTCAGTCTCTGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
