>input_sequence_49569
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---ATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGGCGGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTG
GGTTCTTGTCGCAGGAGGAGTTCTGGTTAGCACGCTCTCGGTCAGACTTGGGTGCAAGCTGAAGCAGATGTTTGATACCA
AGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATTTGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGC
TGAGTGCTGACTATCTGAATTTGCAGCCAAAAGAAGACCTGGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATG
ATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTACTACAGCTTAATTTATGCTCTGTTGCCGAGTATTCATGAG
GTTGCAGCAAACTTTGCAGTCTGCAGTCTTGAGTTTTTTCAGCTGGCATTGTAAATACAGTAACGCAGTTGATGTCATTA
ACTATCATTGCGTCATTGGATTATGAGATTACAGTTATGTAATCTTCCATACCTTGAACATAATCCATGAGTACTAGCCA
TGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGACAAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCAC
TGTTACAC-------CCTTGACTGGGCTAACACAGGATGCTGTCTTGCTATTTTTATTTATGACTTAACAGTTGTTGC-A
AAAAGGCAGAAACAATGTTAACCGTTGGTTGTTATGTGCGGGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGGACCTG
CAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCTTGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGT
GGCGTCATGTGGACATCATCTCCTGACCGGCTTGAAGATCATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCC
TTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGAGAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTG
ATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCTCAAGAACTCTCTCAGCATCGAGGAAACGCAGGCCGCCAAT
TTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCGAATCCGAGAGGGAGATCCAGCAGCTAAGGAAGATCATCGC
GGACCATTGTGTGGCAGAAGCACTCTCCCGCGACAAGCCCTTGCAGGCTGGAAACTGGCAACCAGATGCTGCCAATGGGC
ATGCGAATGGCTACGCTGATAGCAGCATTGATGACCCTGAGCTGCACTGTATCGGTGTTGAGAAGAGGAATGGTGAGGCA
GAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGAAGGAGGTGATAGAAGGGAAGGACTTCCTGCTCCAGAGCTA
CAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAGCTGCAGGAAAGGCTCTCGGCGCAGGTGCCCAACATCTTGT
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr1D_1_TraesCS1D01G437200
CGAAGGGCTCGATGGTTCTCCTCAGCCCGGCCCAGGCCCAACATAACGCAGGCCGAAATCCCAACCAGCCCCTCCAG-TC
GTCTCTCCCTCCGCTCAGAGCCC------TCACTCCCCCAACTCTCGCCAGGTGGCGGCGTCGGCGGCGGCG--GGCGGG
CGATCGGCGGGGCAGGTCCACGGCGTCTGTGCACCGGGCAGGCACACGGGAGCTGCCGGAGCAGCCGCCGACCGATAGGC
CGACCGTCTGGTGAGTGGTGAGACCCCTCCTCGCCCCGTAACCTCCCCAGATCCAGTA----GCGCCAGGTCCCGTCTGG
CTGGAAATGGCCGGCTGATGCGCGGGGCGCGCCATTAGCGCCGCCGAGAGGAGCAGGAGTCGGCGCCGTTAGGGTTCTAG
GAACCGCGGGGATGGCTGTGATTATCCTTAGAGCTAGCTGGCCGCCGCCGTCG----TTTCTCGAGCTAGCTCCCTCCAT
GGATGGATGGATTATTACTGTGGCAGTGAGATCCCGAGCCGCCAGACTCGACGGAGATGCAACTCCTCTTGCTTAGATGC
AACCCCTCTTGGTCAGAAATCTAGGATGCACCCAAAAAAGAAACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCC
ATTTCACTCATGTACACGCCACCCTCAGACTTGAATGCCAAGCGAGATGCCCGTGTTATCTGCCCAGTTCACTCACTTGG
GTCGTGTAATTCAGTTCACTGCAAC-AAAAATTGCTGTTGCTGTTGC------TGTTTTACCCC-------TGTGATCCA
TATTTGCATAT-TGCTGTTGCTGCTGAAGTAGCAGCAGCAGCATGATCTTTTCTTGCCACTGTGATCCATATTTGTATGG
GCGAGACTAA-----------GATCGGATAGCGGCCTTCGCACTTCCTTTCCTGTATTTGTGTGGGCGAAATGTACCATT
CTTTTTTCCTGTACTACATGGGAACCATGATGGTTGACATGTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGTTCTT
AGGATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGGCGGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTG
GGTTCTTGTCGCAGGAGGAGTTCTGGTTAGCACGCTCTCGGTCAGACTTGGGTGCAAGCTGAAGCAGATGTTTGATACCA
AGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATTTGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGC
TGAGTGCTGACTATCTGAATTTGCAGCCAAAAGAAGACCTGGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATG
ATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTACTACAGCTTAATTTATGCTCTGTTGCCGAGTATTCATGAG
GTTGCAGCAAACTTTGCAGTCTGCAGTCTTGAGTTTTTTCAGCTGGCATTGTAAATACAGTAACGCAGTTGATGTCATTA
ACTATCATTGCGTCATTGGATTATGAGATTACAGTTATGTAATCTTCCATACCTTGAACATAATCCATGAGTACTAGCCA
TGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGACAAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCAC
TGTTACAC-------CCTTGACTGGGCTAACACAGGATGCTGTCTTGCTATTTTTATTTATGACTTAACAGTTGTTGC-A
AAAAGGCAGAAACAATGTTAACCGTTGGTTGTTATGTGCGGGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGGACCTG
CAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCTTGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGT
GGCGTCATGTGGACATCATCTCCTGACCGGCTTGAAGATCATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCC
TTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGAGAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTG
ATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCTCAAGAACTCTCTCAGCATCGAGGAAACGCAGGCCGCCAAT
TTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCGAATCCGAGAGGGAGATCCAGCAGCTAAGGAAGATCATCGC
GGACCATTGTGTGGCAGAAGCACTCTCCCGCGACAAGCCCTTGCAGGCTGGAAACTGGCAACCAGATGCTGCCAATGGGC
ATGCGAATGGCTACGCTGATAGCAGCATTGATGACCCTGAGCTGCACTGTATCGGTGTTGAGAAGAGGAATGGTGAGGCA
GAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGAAGGAGGTGATAGAAGGGAAGGACTTCCTGCTCCAGAGCTA
CAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAGCTGCAGGAAAGGCTCTCGGCGCAGGTGCCCAACATCTTGT
AGGATCTACTCCACAAGCTCGCTACAAGGCGCAATTTGCTAGGGCTAAGGTAGCTAGCAAATTGGTGTTGTCAAGGGATT
CACAGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCAGAATGTTACGTTGATTCGTTTTTCTTTCCCCTCAGTTTTA
GTCCTTGGTTGCTCAGTGTT-AAAAGAAGGGCTTACT------TTTTTCAGTTGCTAGGGCTAGGTAGGATAC----TGG
ACCTGGATGAGTGTTGTATAGGTTTTTCGGGTTTGCAGGCGTGATCGTGTTACGTGCCCCCTCTTTTAGCTCGGCGTGGT
TTAGGCCAGTGCGGCTTCAAATTTGTGGACTTTTTTTT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------AGTAATGGCTTTGTTTCTCTGTATGTTTCTGATGCCT
TGTGTTTGCAAAGGCAGTTCAGTTGATTCCAGAAAATTGATGGATTGAGCAGCCTGTAACAAATGGGCGTCATGTGTATG
GACATCACAGCCTGTAGCACTCAACTGCTCTGTACCATGGGACTCATCCATTCAGATACCAAGTACAAGGCCCAAACCTT
TCCTTGTTACAAGCTGATTAGGCC--TGTAACCAGAGAGTGCCCATCAATGGATGGTACCTGCTTGGTGCTTTGCTTCAT
CACTGAAGAGTTTCTATCCTAGAA-----TGTAGTAATGTTTCCTTCATTCCTGTGACAATCTTAACTACTATGTTTTTT
GTAATGCTGTTGTCCTGCCA------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAAAAAAAAGACGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CATGTGGCAGCAGCACTTGCTGTTGTGTGGCTTACGCAGT
GGAGCACATGACATGACCAAAATATGTCACTTGATCACTCAATCCTCCTGTGGTGGGCAGG------GCTGCAGTTCCTA
ATCTTGGTGCCAGTTTTCATGAGAAGCAACCAAGGGGGATGGGCATGCAGAGAGGAA-------GATGATGGCCAAGCAG
GGCTGGACCTCACTCACTCCTCTCCTC--TGCTCTGCTCCAGTCCACCATCATGGGAAGAAAGAAGGCCAAGCAAGATGC
CCATG
>chr1A_1
CGAAGGGCTCGATGGTTCTCCTCAGCCCGGCCCAGGCCCAACATAACGCAGGCCGAAATCCCAAGCAGCCCCCGCAGTTC
GTCTCTCCCTCCGCTCAGAGCCC------TCACTCCCCCAACTCTCGCCAGGTGGCGGCGTCGGCGGCGGCG--GGCGGG
CGATCGGCGGGGCAGGTCCACGGCGTCCGTGCACCGGGCAGGCACGCGGGAGCTGCCGGAGCAGCTGCCGACCGATAGGC
CGACCGTCTGGTGAGTGGTGAGACCCCTCCTCGCCCCGTAACCTCCCCAGATCCAGTA----GCGCCAGGTCCCGTCTGG
CTGGAAATAGCCGACTGAGGCGCTGGGCGTGCCATTAGCGCCGCCCAGAGGAGCAGGAGTCGACGCCGTTAGGGTTCTAG
GAACCGCGGGGGTGGCTGTGGTTGTCCTTAGAACTAGCTGGCCGCCGCCGCCG----TTTCTCGAGCTAGCTCCCTCCAT
GGATGGAT----TATTGCTGTTGTGGTGAGATCCCGAGCCGCCAGACTCGAGGGAGATGCAACTCCTCTTGCTTAGACGC
AACTCCTCTTGGTCAGAAATCTAGGATGCACTCAAAAAAGGAACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCC
ATTTCACTCATGTACACGCCACCCTCAGACTTGAATGCCAAGCGAGATGCCCGTGTTATGTGCCCAGTTCACTCACTTGG
GTCGTGTAATTCAGTTCACTGCAAC-AAAAATTGCTGCTGCAGAGCATAACCTTGTTTTGCCCC-------TGTGATCCA
TATTTGCATATCTGATGTTGCTGCTGAAG---CAGCAGCAGCATAATCTTGTCTTACCACTGTGATCCATATTTGTATGG
GCGAGACTAA-----------GATCGGATAGTGGCCTTCGCACTTCCTTTTCTGTATTTGTATGAGTGAAATGTACCACT
CC-TTTTCCTATACTGCATGGAAATAATGATGCCGAACATGTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGTTCTT
AGGATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGGCAGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTG
GGTTCTTGTCGCGGGAGGAGTTCTGGTTAGCACGCTCTCGGTCAGACTTGGATGCAAGCTGAAGCAGATGTTTGATACCA
AGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATTTGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGC
TGAGTACTGACTATCTGAATTTGCAGCCAAAAGAAGACCTGGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATG
ATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTGCTACAGCTTAATTTATGCT-TGTTGCCGAGTATTCATGAG
GTTGCAGCAAACTTTGCACCCTGCAGTGTTGAGTTTTTTCAGCTGGCATTGTAAATACAGTAACACAGTTGATGTCATTA
ACTATCATTGCATCATTGGATTATGAGATTACAGTTATGTAATCTTCCATACCTTGAACATAATCCATGAGTACTAAGCA
TGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGACAAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCAC
TGTTACAC-------CCTTGACTGGGCTAACACTGGACGCTGTCTTGCTATTTTTATT--TGACTTAATAGTTGTTGCAA
AAAAGGCAGAAACAATGTTAACTGTTGGTTGTTATGTGCGGGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGCACCTG
CAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCTTGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGT
GGCGTCATGTGGACGTCATCGCCTGACCGGCTTGAAGATCATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCC
CTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGAGAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTG
ATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCTTAAGAACTCTCTCAGCATCGAGGAGACGCAGACCGCCAAT
TTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCGAATCCGACAGGGAGATCCAGCAGCTAAGGAAGATCATCGC
AGATCATTGTGTGGCTGAAGCACTCTCCCGCGACAAGCCCTTGCAAGCTGGAAACTGGCAACCAGATGCCGCCAATGGGC
ATGCTAATGGCTATGCTGATAGCAGCATCGATGACCCTGAGCTGCACTGTATTGGTATTGAGAAGAGGAACGGCGAGGCA
GAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGAAGGAGGTCATCGAAGGGAAGGACTTCCTGCTCCAGAGCTA
CAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAGCTGCAGGAAAGGCTCTCGGCACAGGTGCCCAACATCTTGT
AGGATCTACTCGTCAACCTCGCT--AAGGCGCAGTTTGCAAGGGCTAATGTAGCTAGCAAATTGGTGTCGTCAAGGGATT
CACAGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCAGAATGTTTACATTGATTTG-TTTCTTTCCTCTCAGTTTCT
GTCATTGGTTGCTCAGTGTCAG-AAAAAGGGCTTAGTTTTTTCTTTTTCAGTTGCTAGGGCTAAGGTAGCTTTAGATTGA
ACTTGGATGAGTGTTGTACAGGTATTTCGGTCTTG-AGGCGTGATCATGTAATGTGCCCCCTCTTTTAGCTCAGCGTGGT
TTACGCCGGTGTGGCTTCGAATATGTGGATGCTTACATTTCTGAAGTTTGCTTTGCTAGACACATCTGCCATGCATGTTT
AAGAGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAAATGGCTTTGTTTCTCTGTGTGTTTCTGATGCCG
TGTGTTTGCAAAGACAGTTCAGTTCACTCCAGAAAATTGATGGATTGAGCAGCCTATAACAAATGGGCTTCATGTGTAAT
GGGCACCA----------------------------ATGGAGCTCATCCATTCAGATTCCAAACAGGAAGCCCAGACCTT
-----GTTATAATCTGATTAGGCTTGTGTAACTAGAGAGTACCCGTTAATGAGTGATACCTGCTTGGTGCTTTGCTTCAT
CACCGAAGAGTTTCTATCCTAGAATAGAATGTAGTAATGTTTCCTTCATTCCTGTGACAATCTTAACTAG--TAT-----
---ATGCTGTTGCCCTGCGAGAGGGCACCATCTGAACCCATGGGCATATGCACCCACTTTTCATAAAATGCATTTTAAGC
ACGTTGTAAAATATCAAAAAAATCAAAAGAAAATATCACGCATACATGTTTGCAAATGTGTGTACGCGGCACAAAGTTTT
ATGAAAAGATGTCTTTTTGTTTTGCCTCCGTAAAAAA----GACAAATTTCAGTGCTTCTAAATAGTGTTTCACGACATA
ATTTTTTGTCTTTTTTGCACAGGCCACAAAAAAAGTTATTTTTCCGTGAAACTTTATGCACGCACATAGAACATGGAGAC
GTACCCGTGCAATTTTTTTCCAGATATTTTTAGAATTTAGAAATGTGTTTTTCAAAGTGGGTTCATATGTACCCGGGTTC
ATCCATGCACTTCTCGTTGCCCTGCCTAGAAAATGTATGGCATGTGGCAGCAGCACTCGGCTGT-TGTGGCTTGTGCACT
GGAGCAC-----ATGACCAAAATATGGCACTTGATCACTGAATCCTCCTGTGGTGCCACTGCCAGTAGCTGCAGTTTCTA
ATCTTGGTGCCATTTCTGATGAGAACCAACCAAGAGGGATGGGCATGCAGAGAAGATG----ATGATGATGGCTAGGCAG
AGCTGGACCTCACTTGCTCTCCTCTGCTGTGCTCTGCTCCAGTCCACCATCATGGGAAGAAAGAAGGCCA----------
-----
>chr1B_7
------GCTCGACTGTTCTCCTCAACCCGGCCCAGGCCCAACATAACGCAGGCCGAAATCGCAACCAGCCCCCGCAG-TC
GTCTCTCCCTCCGCTCAGAGCCCGAGCCCTCACTCCACCAACTCTCGCCAGGTGGCGGCGTCGGCGTCGGCGGCGGCGGG
CGATCGGCGGGGCAAGTCCACGGCGTCCGTGCACCGGCCGGGCGCACGGGCACTGACGGAGCAGCTGCCG----------
-GACCGACTGGTGAGTGGTGAGACCCATCCTCGCCCCGTAACCTCCCCAGATCCAGTCCCCCGCACCAGGTCCCGTCCGG
TTGGAAATGGCCGACTGATGCGCGGGGCGCGCCATTAGCGCCGCCGAGAGGAGCAGGGGTCGACGCCGTTAGGGTTCTAT
GAACCGCGGGGATGGCCGTGATTGTCCTTAGAGCTAGCTGGCCCCCGCCGTCGTTTATTTCTCGAGCTAGCTCCCTCCAT
GGATGGAT----TATTGCCGTGGCAGTGAGATCCCGAGCCGCCAGACTCGAGGGAGACGCAACTCCTCTTGCTTAGATGC
AACCCCTCTTGGTCAGAAATCTAGGATGCTCTCAAAAAAGAGACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCC
AGTTCATTCATGTACACGCCACCTTCAGACTTGAGTGCCAAGCGAGATGCCCGTGTTATCTGCCCAATTCACTCACTTGG
GCCGTGTAATTCAGTTCATTGCAGCAAAAAATTGCTGCTGCAGAGCATAATCTTGTTTTACCCCTGTGAATTGTGATCCA
TATTTGCATAT-TGCTGTTGCTGCTGAAA---CAGCAGCAGCATAATCTTGTCTTACCACTGTGATCCATATTTGTATGG
GCGAGACTAAGACCGGATGCAGATCGGATAGCGGCCTTCCCACTTCCTTTTCTGTATTTGTGTGGGCGA-ATGTACCATT
CTTTTTTCCTGTACTGCATGGGAACCATGATGCTTGACATGTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGCTCTT
AGGATGAGGTCCTCCAAGAGTAATGGGAGCGTGCAGAAGGCGGGGAGAGTTAACCATGCCCAGGGAGAAGGGGCGAGCTG
GGTTCTTGTCGCAGGAGGAGTTCTTCTGAGCACTCTTTCAGTCAGATTTGGGTGCAAGCTGAAGCAAATGTTTGATACGA
AGAAGCAAAATAGCACCTCCAGAGGTCTGATGCTCTCATTTGCACTTGTAGTTCTAACTGCAGTCATATGTGCTGTCTGC
TGAGTGCTGACCATCTGAATTTGCAGCCAAAAGAAGGCATGGATCTTGTGAACTACACTCGAATCTGTACCGTTTTGATG
ATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTGCTACAGCTTAATTTATGCTCTGTTGCCGAGTATTCATGAG
GTTGCAGCAAACTTTGCAGTCTGCAGTGTTGAGTTTTTTCAGCTGGCATAGTAAATACAGTAACTCAGTTGATGTCATTA
ACTGTCATTAC--CATTAGATTATGAGATTACAGTTATATAATGTGCCATACCTTGAACATAATCCATGAGTACTAGCCA
TGAAGCCAAAAATTAAGCCACACACTGGCAGTATGCTGACACAGTGGCTATATAGCGAATTTCGCATTGTTAAATTGCAC
TTTACACCCTTGAGGCCTTGACTGGGCTAACACTGGACGCTGTCTTCCTATTTTTATTTATTACTTAACAGTTGTTGC-A
AAAAGGCAGAAACAATGTTAACTGTTGGTTGTTATGTGCCGGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGCACCTG
CAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCTTGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGT
GGCGTCATGTGGACGTCATCGCCTGACCGGCTTGAAGATCATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCC
CTGTGTTTCAGAGTCAGGATCTGACATTTATATCAAGAGAGAGGTCATACAGAAGTTGAGACAGCACCTCAGGAAACGTG
ATGAGATGATCATAGAGATGCAAGCACAGATAGCTGATCTTAAGAACTCTCTCAGCATCGAGGAGACGCAGACCGCCAAT
TTGCAGTCCCAGCTGGATGGTGCCAACCGAGATCTGTTCGAATCTGAGAGGGAGATCCAGCAGCTAAGGAAGATCATCGC
AGATCATTGTGTGGCAGAAGCGCTCTCCCGCGACAAGCCCTTGCAAGCTGGAAACTGGCAACCAGATGCCGCCAATGGGC
ATGCGAATGGCTACGCTGATAGCAGCATCGATGACCCTGAGCTGCACTGTATTGGTATCGAGAAGAGGAACGGCGAGGCA
GAGAGGGTGGAGATGCTCAAGAGAGAGGTGGGCGAGCTGAAGGAGGTGATAGAGGGGAAGGACTTCCTGCTCCAGAGCTA
CAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAGCTGCAGGAAAGGCTCTCGGCGCAGGTGCCCAACATCTTGT
AGGATCTACTCGACAACCTCACTACGG-----AATTTGCTAGGGCTAAGGTAGCTAGCAAATTGGTGTTGTCAA-GGATT
CACGGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCAGAATGTTACGTTGATTCGTTTTTCTTTCCCCTCAGTTTTA
GTCCTTGGTTGCTCAGTGTTTAAAAGAAGGGCTTATT------TTTTTCAGTTGCTAGGGCTAGGTAGGATAC----TGG
ACCTGGATGAGTGTTGTATAGGTTTTTCGGGTTTGCAGGCGTGATCGTGTTACATGCTCCCTCTTTTAGCTCGGCGTGGT
TTAGGCCAGTGCGGTCTTGAATTTGTGGACGTTTTTTTCCAGTA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAATGGCTTTGTTTCTCTGCGTGTTTCCGATGCCT
TTTGTTTCCAAAGGCAGTTCAGTTCACTCCAGAAAATCGATTTATTCAGCAGCCAATAACGAATGGGCTTAATGTTTATG
GACACCACATCCTGTAACATTCCATTCCTATGT------------ATCCATTGAGATTCCAAACACAAGGCCCAAACCTT
TC-TTGCTACAATCTGATTAGACT--TGTAACTAACGAGTACCCATGAATTA--GATAACTGCCTGGTGCTTTGCTTCAT
CACTGAAGAGTTTGTATTCTAC-----AATGTAGTAATGTTTCCTTCATTCCTGTGACAATCTTAACTATGTTGT-----
---ATGCTGTTGTCCTGCCA------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAAAA----GACAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CATGTGGCAGCAGCACTTGTGGC--TGTGGCTTGTGCACT
GGGGCAC-----ATGACCAAAATATGGCACTTGATCACTGAGTCCTCCTGTGCTGTGCAGG------GCTGCAGTTCCTA
ATCTTGGTGCCAGTTTTCATGAGAACCAACCAAGAGGGATGGGCATGCAGAGAAGATGCCTGATGATGATGGCCAAGCAG
AGCTGGACCTCACTCTCCTCCATA-TC--TGCTCTGCTCCAGTCCACCATCATGGGAAGAAACAAGGCCAAGCAAAATGC
CCATG
>SNPs
------------------------------------------------------------------------SS------
--------------------------------------------------------------------------------
---------------------------S-------------------------------------S--------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------S-----------------
-----------------------S--------------------------------------------------------
--------SSSS----S----------------------------------S----------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---S-SSSS---------------------------------
-----------------------------SSS------------S-----S----S------------------------
--------------------------------------------------S-----------------------------
---------------S----------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
---------------------------S------------------------------------S---------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---S------------------------------------------
----------------------S---------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------S-----S-----------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------------S-----------------------S------S--------
--------------------------------------------------------------------------------
S--S-----------------------------------------S-----------------------S----------
----------------------------S-----------------------S---S-------------S--S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----S---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-------------------S--------------
------------------------S-S----------------------------S------------S-----------
----S----S------S--S--S-S-S--S---SSS----SS---------------S----SS----------------
--S---------S----------S--------S-------S-----S----SS--S------------------------
---------------------------------------------------------------------SSS---SSSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SSSS---S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SS-S-S--------SS---S-
-------SSSSS--------------S------------S---------------S------------------------
-------------------------S--------S------------------S--S-----------------------
S--------------S----S---S--------------------------------------------------S----
-----
>forward_845
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GAAGTAGCAGCAGCAGCATG-----------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_1783
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGTTGGTTGTTATGTGCGGG--------------------------------------
--------------------------------------------------------------------------------
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-----
>forward_1714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------CCCTTGACTGGGCTAACACA----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----
>reverse_3799
--------------------------------------------------------------------------------
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--------------------------------------AAAGACGACATGTGGCAGCA----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----
