>input_sequence_49547
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----------------------------------------------------------------------------ATGG
GGACAAGCAACATGGGCAATGAAGGGAGCTCAGCCGCAAGCAACGATGACAGCACGGTGGAGGAGGAAGGCGGCCAGGAC
ATGACCAGGGCCGGCGACTCGTCGTCGTCAGTGCGCCCCTATGTTCGTTCCAAGAATCCCCGCCTCCGCTGGACGCCAGA
GCTCCACCACTGCTTCGTCCGCGCCGTG------GAAAGGCTCGGCGGCCAAGATCGTAAGCCTACTCTCATTTTCCACA
ATCCTAGC------------------------------------------------------------------------
----------------------TATATATGCATCCATCGACATGTTAACTTGATGTTCATCTTTGTGCAGTTGCAACTCC
TAAGCTGGTCCTTCAGTTGATGAACGTTAGAGGGCTTAGCATAGGCCATGTCAAGAGCCATCTCCAGGTACGCATCACTT
TACTTCTTATTTTTGCATCGTCGTCTTTTGCTGTGCGTTCATATTTCACTGATTCCCCTTTGCATGCGCAATGCTAATTC
TGCAATTAATTGACGATGGGCCTTCAGATGTACAGAAGCAAGAAGATTGACGATTCCGGCCAGGGTATGTCCACGAACTC
ATGAATTTCACAGCCCTCCTT-------------TGGATTCAGTATATTTTGCCC-TGATCTGGTCGACTCTTATGT--G
CAGTCATCATAGGTCACTTGCAACAGGGAGGACAAGTCTATAACTATGCTCATCTCCCCTTCCATCATCGTGTCAGTGGT
GCCGGTACAATGCTCTCTAGGTAGTTCATTGGATCTACTAAATTGCCCTCTACACATTCAAGTTTTTTGTTAAGCGATCG
ACTATATA----TTTTGGATAATTGGGGATAAATTTATTTTCCTCGTCCTCTGCATTATGAGATAAAACGACTAGCAAAG
TTATTCAATAATCCTAATTTGTTAGTTCTGAGTACTGACTAATTAATCTCCTTGGATGGCGAACTAGGTTTGGCACTAGA
CCATGTCCTCCATCGAGGG---GGAGCTGGCATGAACCATACTGGCTCCATGGCCACCGTTTACTTGGATCAAAACCATA
CTATTCATCATCAGCAGCAGCTCATCATGACGAGGCTCTCCTTAGAGCACGTGCTCAACATGTATCTGGCTATAACCCAG
CTTTGATAGTCCAAGAATCCTCTTCATCGAGAAATGATTATCACGCCATGAATCGCTACCACTATGAAAGACGGCCGCTG
CAAGCTGCTACGACGGAGGACA------------ACGATGATCAGATCCATGGTCGTGATATAAACCTGGATCTCTCGCT
CGATATCGGTGGTGGACAGCGGCTAGAGATGAAGAGCAAGAGAGGCTGCACGAGATGGGGGAAACAAGCAGAAGAAGATG
ATGACGATCAGGTTGATGTCAATGAAGAATTGAAGAGCACTGCTACTAGACTGTCTCTATCCCTACTCTCTCCTAGTCCT
ATTACT-------CTTGATCG-----------------------------------------------------------
-------------------------------------------------------------------AAAGGGGAGTAGT
GCTAGTGATCATGCACTAGGTCTAGATGTCAATGTGGATAAGATAGGGAAAGTGCAATATGCAATCAGGGCAAGCACTCT
TGATCTCACCATATGA----------------------------------------------------------------
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>chr4A_1_TraesCS4A01G180900
TCTTCTTAAAAAAAAGAAGCACAACTTTTTCTTGAAACTCAGGTAACCTTTAATTGCACAATGTACCAAAAAGTTAAAGT
GCTAACATATAACATTCAACCAGAAATTTAGTTAATGTGTCTTACAAGAAGAAATCATGATTACTGTTACTACTAAGCAA
ACGATTGACCTATAATGATGTCTACCCTGTGATGTCTACTGTACAAAAGAACAAAAGTTTAGTAGTGGGCCCACCAGGCA
GTGA-GGGATGCCAATATG-------------------------------------------------------------
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-----------------------------------GATGTTGAGTATTCAAGGACTATTTTTTTAAAA-GGTCGGCACTG
ATCTGCTTTTGCACAAACACAATGAAACGTGCGCTTGTGATGTACCGCGCTTCTTCTAGGACCCACCGATTGCACAC---
----------------------------------TAGTGTATTACGTGAAAACTCATGCAATCTC---------------
--------------------------ATGCACGCGTGTACTTAAGATTCATTGCGTGTGCAAGGACCTAGCTGGACTTTT
TAGTTAGTGTTCAGTGCTGGCCTTAGATCTCTCTTTTCCAAACCAACTAGAGAAAGTGAAAGCCACACACACCAAAGTGA
TAGCTAGTCAGAACGGGCGACTTTGGACTAACTTTAATTAATTTCAACAGTAAAAAAACGAGCTTGCTTCCAGCACTTAA
CTGTCCTTCTCTCCTTAGGTATACAGGACTAGTACAT-GTACTGTAAAGTGTAAAGGTTAGACTTAACTCAATCTTTCAC
CACCTCACTTTTAATTTGGATCTCCCATGCATTAGTATGCTTCCTTCCAAAGTCCACATATAATGTAGGAGTATGCATGA
GCTCACTTCTGTTGTCTCCCACGCGCCAGCTAGCTT--------CACATGCAGATAGATAGAATTCAATGGCGACCTCCT
TTAATTTGGCCTGATCTAT-ATCTTCCACCAGAGTTGATTAAATGATAATGAGATGAGATCGATGCAAC----------A
CAACAACAACAGCCTCAAATCAGGTCTCAAGCGCCTCGATCATCAAGTAGCTAGCGAGATCACCATCGGCTAAACGATGG
GGACAAGCAACATGGGCAATGAAGGGAGCTCAGCCGCAAGCAACGATGACAGCACGGTGGAGGAGGAAGGCGGCCAGGAC
ATGACCAGGGCCGGCGACTCGTCGTCGTCAGTGCGCCCCTATGTTCGTTCCAAGAATCCCCGCCTCCGCTGGACGCCAGA
GCTCCACCACTGCTTCGTCCGCGCCGTG------GAAAGGCTCGGCGGCCAAGATCGTAAGCCTACTCTCATTTTCCACA
ATCCTAGC------------------------------------------------------------------------
----------------------TATATATGCATCCATCGACATGTTAACTTGATGTTCATCTTTGTGCAGTTGCAACTCC
TAAGCTGGTCCTTCAGTTGATGAACGTTAGAGGGCTTAGCATAGGCCATGTCAAGAGCCATCTCCAGGTACGCATCACTT
TACTTCTTATTTTTGCATCGTCGTCTTTTGCTGTGCGTTCATATTTCACTGATTCCCCTTTGCATGCGCAATGCTAATTC
TGCAATTAATTGACGATGGGCCTTCAGATGTACAGAAGCAAGAAGATTGACGATTCCGGCCAGGGTATGTCCACGAACTC
ATGAATTTCACAGCCCTCCTT-------------TGGATTCAGTATATTTTGCCC-TGATCTGGTCGACTCTTATGT--G
CAGTCATCATAGGTCACTTGCAACAGGGAGGACAAGTCTATAACTATGCTCATCTCCCCTTCCATCATCGTGTCAGTGGT
GCCGGTACAATGCTCTCTAGGTAGTTCATTGGATCTACTAAATTGCCCTCTACACATTCAAGTTTTTTGTTAAGCGATCG
ACTATATA----TTTTGGATAATTGGGGATAAATTTATTTTCCTCGTCCTCTGCATTATGAGATAAAACGACTAGCAAAG
TTATTCAATAATCCTAATTTGTTAGTTCTGAGTACTGACTAATTAATCTCCTTGGATGGCGAACTAGGTTTGGCACTAGA
CCATGTCCTCCATCGAGGG---GGAGCTGGCATGAACCATACTGGCTCCATGGCCACCGTTTACTTGGATCAAAACCATA
CTATTCATCATCAGCAGCAGCTCATCATGACGAGGCTCTCCTTAGAGCACGTGCTCAACATGTATCTGGCTATAACCCAG
CTTTGATAGTCCAAGAATCCTCTTCATCGAGAAATGATTATCACGCCATGAATCGCTACCACTATGAAAGACGGCCGCTG
CAAGCTGCTACGACGGAGGACA------------ACGATGATCAGATCCATGGTCGTGATATAAACCTGGATCTCTCGCT
CGATATCGGTGGTGGACAGCGGCTAGAGATGAAGAGCAAGAGAGGCTGCACGAGATGGGGGAAACAAGCAGAAGAAGATG
ATGACGATCAGGTTGATGTCAATGAAGAATTGAAGAGCACTGCTACTAGACTGTCTCTATCCCTACTCTCTCCTAGTCCT
ATTACT-------CTTGATCG-----------------------------------------------------------
-------------------------------------------------------------------AAAGGGGAGTAGT
GCTAGTGATCATGCACTAGGTCTAGATGTCAATGTGGATAAGATAGGGAAAGTGCAATATGCAATCAGGGCAAGCACTCT
TGATCTCACCATATGATCGATCTGTTGCAGTGTAGTACTTAATACTTATCCATA--------------------------
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-------------------------------------------------TCCATATATACATATGTAGAGCAAGAAACCT
ATGTATAACATATAAAACTTATTTAGTATTTATTATATGTGTCCTTTTT--TCCAAAAACAGGGGAACGCCCTCGGCCTC
AGTCATTATATATTCCTTTTTTTCTTTGAAAAGAAGGTTGAACCCCCCGCCTCTGCATCGAGTGATGCACACAGTCATTT
TTGTTACTCCCTCTAATTCTAATTAATTGACTCAGCCTTGTATAGAGGTTGCATCAATGAATTTGGATCGGAGGGAGTA-
TATTATTCAACAATGCCTTATAAGAT-AAAACATCGATCCTTCTTTCACCCTCTAGGCAATAAAGACA-CACCACCTTCA
AACTTGATGATAATGGTGGTCTTGATCAGGGTTGCTTGCCCTGACCTCAT------------------------------
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---------------------------------------CGAGTCTGCCATCCTCACGATTCAACCAGAGTGCCACCGAG
AGGAGCAGACGTCGTGCACTGCGCCTCTAGACAGCCACGGTCGCGGGACACTAGATCCCTGCCACCCCCTTCACCGGCAG
CGCAC-GGCTTTCTTGATGGCCACCTGTGTGGGGATGACAAGGGGAGAGGGGAGGGCGGAGGGGTTGGCGGTAGATGGGG
TAAGGTTTTGCGCCCCCGGTCGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NN----------------------------------------------------------AGAGAGAGAGAGTCCATGTA
TATCTGCCATTATAT-TGTCATTGGTATTTCATCTTGATGATGACCCTACTCTTCTAAACTAAGGGATCCTCTAACTCAA
AAGGGATTTCAAAGGGTTTTGAAGT
>chr4D_1
TCTTCTTAAAAGAAAGAAGCACAACTTTTTCTTGAAACTCAGGTGACCTTTAATTGCACAATGTACCAAAAAGTTAAAGT
GCTAACATATAACATTCAACCAAAAATTTAGTTAATGTGTCTTACAAGAAGAAATCATGATTACTGCTACTACTAAGCAA
ACGATTGACCTATAATGATGTCTACCCTGTGATGTGTACTGTACAAAAGAACAAAAGTTTAGTAGTGGGCCCACCGGGCA
GTGAAGGGATGCCAATATG-------------------------------------------------------------
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-----------------------------------GATGTTGAGTATTCAAGGACTATTTTTTTT-AA-GGTCGGCACTG
ATTTGCTTTTGCACAAACATAATCAAACTTGCGCTTGTGATGTACCGCGCTTCTCCTAGGACCCACCGATTGTACAC---
----------------------------------TAGTGTATTACGTGAAGACTCATGCAATCTC---------------
--------------------------ATGCACGCGTGTACTTAAGATTCATTGCGTGTGCAAGGACCTAGCTGGACTTTT
TAGTTAGTGTTTAGTGCTGGCCTTAGATCTCTCTTTTCCAAACCTACTAGAGAAAGTGAAAGCCACACACACCAAAGTGA
TAGCTAGTCAGAACGGGCGACTTTGGACTAACTTTAATTAATTCCAACAGTA-AAAAATGAGCTTGCTTCCAGCACTTAA
TTGTCCTTCTCTCCTTAGCTATACAGGACTAGTACATTGTACTGTAAAGTGTAAAGGTTAGAGTTAGTTCGATCTTTCAC
CACCTCACCTTTAATTTGGATCTCCCATGCATTACTA-GCTTCCTTCCAAAATCCACATATAAT------GTATGCATGA
GCTCACTTCTGTTGTCTCGCACGCGCCAGCTAGCTT--------CACATGCAGATAGATAGAATTCAATGGCGACCTCCT
TTAATTTGGCCTGATCTAT-ATCTTCCACCAGAGTTGATTAAATGATAATGAGATGAGATCGATGCAAC----------A
CAACGACAACAGCCTCAAATCAGCTCTCAAGCGCCTCGATCATCAGGTCGCTAGCGAGATCACCATCGGTTAAACGATGG
GGACAAGCAGCATGGGCAACGATGGGAGTTCAGCCGCAAGCAACGATGACAGCACGGTGGAGGAGGAAGGCGGCCAGGAC
ATGACCAGGGCCGGCGACTCATCGTCGTCGGTGCGCCCCTACGTTCGTTCCAAGAATCCCCGCCTCCGCTGGACGCCGGA
GCTCCACCACTGCTTCGTCCGCGCCGTG------GAAAGGCTCGGCGGCCAAGATTGTAAGCCTACTCAT-TTTTCCACC
ATCCTAATTACTCCCTCCGTCCCATAATATAAGAACGTTTTTGACACTAGCCGTCCCATAATATAAGATTTTTTTTATAT
TATAGGACGGAGGAAGTATATATATATATGCATCGATTGACATGTCAACTTGATGTTTATTTTTGTGCAGGTGCAACTCC
TAAGCTCGTCCTTCAGTTGATGAACGTTAGAGGGCTTAGCATAGGCCATGTCAAGAGCCATCTCCAGGTACGCATCACTT
TACTTCTTAATTTTGCATCGTCGTCTTTTGCTGTGCGTTCATGTTTCACTGATTCCCCTTTGCATGCGTAATGCTAATTC
TGCAATTAACTGACGATGGGCCTTCAGATGTACAGAAGCAAGAAGATTGACCACTCCGGCCAGGGTATGTCCACGAATTC
GTGAATTTCACAGCCCTTTCTTATTTGATTTGAATGGATTCAGTATATTTTGCCCCTGATCTGACCGATTATTATGT--G
CAGTCATCATAGGTCACTTGCAACAGGGAGGACAAGTCTATAACTACGCTCATCTCCCCTTCCATCATCGTGTCAGTGGT
GCCGGTACAATGCTCTCTAGGTG------TGGATCTACTAAATTGCCCTCTACACATTTTG--TTGTTGTTAAGCAATTG
ACTATATC----TTTTGGATAATTTAGGATAAATTTATTTCCCTCATCCTCTGCATTATGAAATAAAACGACTAGCAAAG
TTATTCAACAATCCTAGATTGTTAGTT-------CTGACTGATTAATCTCCTTGGATGACGAACTAGGTTTGGCACTAGA
CCATGTCCTCCATGGAGGG---GGAGCTGGCATGAACCATACTGGCTCCATGGCCACCGTTTACTTGGATCAAAACCCTA
CTATTCATCATCAGCAAGAGCTCATCATGACGAGGCTCCCCTTAGAGCACGTGCTCAACATGTATCTGGCTATAACCCAG
CTTTGATAGTCCAAGAATCATGTTCATCAAGAAATGATCATCACGCCATGAACCGCTACAACTATGAAAGACGGCCGATG
CAAGCTGCT------------ACAATGGTGGACAACAATGATCATATCCATGGTCGTGATATAGACCTGGATCTCTCGCT
CGATATCGGTGGTGGACAGCGGCTAGAGATGAAGAGCAAGAGAGGCTGCACGAGATGGGGGAAACAAGCAGAAGAAGATG
ATGACCATCAGGTTGATGTCAATGAAGAATTGAAGAGCACTGCTACTAGACTGTCTCTATCCCTATTCTCTCCTAGTCCT
AGTACT-------CTTGATCG-----------------------------------------------------------
-------------------------------------------------------------------AAAGGGGAGTAGT
GCTAGTGATCATGCACTAGATCTAGATGTCAATGTGGATAAGATAGGGAAAGTGCAATATGCAATCAGGGCAAGCACTCT
TGGTCTCAGCATATGATCGATCAGTTGCAATATAGTACTTAATACTTATCCATA--------------------------
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-------------------------------------------------TCCATATATACATATGTAGAGCAAGAAACCT
ATGTATAACATATAAAACTTATTTAGTATTTATTATATGTGTCCTTTTTTTTCCAAAAACAGGGGAACGCCCTCGGCCTC
AGTAATTATATG----TTTTTTTCTTTGAAAAGGAGGTTGAACCCCC---------------------------------
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>chr4B_1
TCTTCCTAAAAAAAAGAAGCACAACTTTTTCTTGAAACTCAGGTGACCTTTAATTGCACAATGTACCAAAAAGTTAAAGT
GCTAACATATAACATTCAACCAAAAA-TTAGTTAATGTGTCTTACAAGAAGAAATAATGATTACTGCTACTACTAAGCAA
ACAATTGACCTATAATGATGTCTAC--------------TGTACAAAACAACAGAAGTCTAGTAGTGGGCCCACCGAGCA
GTG-AGGGATGCCAATATGGATGTTGAGTTTTTTTGAGAGTATGCCAATGGCAATACCGTATTTTTATAGAAGGCACAAT
AATATGTACAAGAGTCCTGATGAGATGCGAACAAGTCGTAGGGAGAACCCACACAATGCCTACGCCCTAGCAACTACGGC
TACTCTCTCGCGAAAGGATCTAGAGCACCAACTCCGCCTAGTGCGGCCTTCCTCCAATCATCTATCTCATCTAGGATCTC
TGTCTTAAGTTGCGCAGCCGATATTTGCCTCGAAACATTGTTGAACGCGCCGTTGCTTCCATAGGGCCCAAGCAATTAGG
ATCATGATGGAGTCGAATCTTCTCAGGTCCGCACTGATGTTGAGTATTCAAGGACTATTTTTTTT-AAAGGTCGGCACTG
ATCTGCTTTTGCACAAACATAATCAAACGTGCGCTTGTGATGTACCGC--TTCTTGTAGGACCCAGCGATTGTACACACT
AGTAGTGTTTTTTTTAGAAAAGGAAACACACTAGTAGTGCATTACGTGAAAACTCATGCAATCTCTTTTTTTTTTCTTTT
GAACCGGGCAAAACTCATGCAATCTCATGCACGCGTGTACTTAAGATTCATTGCGTGTGCAAGGACGTAGCTGGACTTGT
TAGTTAG-------TGCTGGCCTTAGATCTCTCTTTTCCAAACCTACTAGAGAAAGTGAAAGCCACACACACCAAAGTGA
TAGCTAGTCAGAACGGGCGACTTTGAACTAACTTTAATTAATTCCAACAGTA-AAGAATGAGTTTGCTTCCAGCACTTAA
TTGTCCTTCTCTCCTTAGGTATACATGACTAGTACAT-GTACTGTAAAGTGTAAAGGTTAGGCTTAATTCAATCTTTCAC
CACCTCACTTTTAATTTGGATCTCCCATGCATTAGTATGCTTCCTTCCAAAGTCCACATA--AT------GTATGCATGA
GCTCACTTCTGTTGTCTCGCACGCGCCAGCTAGCTCAGACATAACATATGCAGATAGACAGAATTCAATGGCGACCTCCT
TCAATTTGGCCTGATCTATAATCTTCCACCAGAGTTGATTAAATGATAATGAGATCGGTGCAACACAACAACAACAACAA
CAACAACAACAGCCTCAAATCTGCTCTCAAGCGCCTCGATCATCAAGTAGCTAGCGAGATCACCATCGGCTAAACGATGG
GGACAAGCAACATGGGCAATGAAGGGAGCTCAGCCGCAAGCAACGATGACAGCACGGTGGATGAGGAAGGCGGCCAGGAC
ATGACCAGGGCCGGCGACTCGTCATCGTCGGTGCGCCCCTACGTTCATTCCAAGAATCCCCGCCTCCGCTGGACGGCGGA
GCTCCACCACTGCTTCGTCCGCGGCCGCGCCATCGAAAGGCTCGGCGGCCAAGATTGTAA--------------------
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---------------------------------------------TAACTTGATGTTCATTTTTGTGCAGGTGCAACTCC
TAAGCTCGTCCTTCAGTTGATGAATGTTAGAGGGCTTAGCATAGGCCATGTCAAGAGCCATCTCCAGGTATCCATCACTT
TACTTCTTAATTCTGCATCGTCGTCTTTTCCTGCGCGTTCATGTTTCACTGATTCCCCTTTGCATGCGTAATGCTAATTC
TGCAATTAACTGACGATGGGCCTTCAGATGTACAGGAGCAAGAAGATTGACGACTCCGGCATGGGTATG-----------
---AATTTCACACCCCTTTGTTATTTGATTTGAATGGATTCAGTATATTTTGCCCCTGATCTGGCCGATTATTATGTGCG
CAGTCATCATAGGTCACTTGCAACAGGGAGGACAAGTCTATAACTACGCTCATCTCC---TCCATCATCGTGTCAGTGGT
GCTGGTACAATGCTCTCTAGGTAGTTCATTGGATCTACTAAATTGCCCTCTACACATTCAATTTCTTTGTTAAGCGATCG
ACTATATATTAATTTTGGATAATTGGGGATAAATTTATTTTCCTCGTCCTCTGCATTATGAGATAAAATGACTAGCAAAG
TTATTCAATAATTCTAGATTGTTAGTTCTGAGTACTGACTGATTAATCTCGTTGGATGACGAACTAGGTTTGGCACTACA
CCATGTCCTCCATGGAGGAGGAGGAGCTGGCATGAACCATACTGGCTCCATGGCCACCGTTTACTTGGATCAAAACCCAA
CTATTCATCATCAGCAGCAGCTCACCATGACGAGGCTCTCCATAGAGCACGTGCTCAACATGTATCTGGCTATAACCCAG
CTTTGATAGTCCAAGAACCCTGTTCATCAAGAAATGATCATCATGCCATGAACCGCTACAACTATGAAAGACGGCCACTG
CAAGCTGCT------------A------------ACGATGATCATATCCATGGTCGTGATATAAACCTGGATCTCTCGCT
CGATATCGGTGGTGGACAGCGGCTAGAGATGAAGAGCAAGAGAGGCTGCACGAGATGGGGGAAACAAGCAGAAGAAGATG
ATGACCATCAGGTTGATGTCAATGAAGAATTGAAGAGCACTCCTACTAGACTGTCTCTATCCCTATTCTCTCCTAGTCCT
AGTACTCTTGATCGAAAGGGGAGGGACGAGGCTTCTCTGCCGTGCGGCAGGGTACCGTTCGGCCACTGACAGGTGGGCCC
ATCAGGGATCAGGCCCACATGTCAGTGCCCCCAACGGCATGTGCCGTACGTCAGGGGAGCTGCTTCTAAAGGGGAGTAGT
GCTAGTGATCATGCACTAGGTCTAGATGTCAATGTGGATAAGATAGGGAAAGTGCAATATGCAATCAGGGCAAGCACTCT
TGATCTCACCATATGATCGATCAGTTGCAGTGTAGTACTTAATACTTATCCATACGAAAATTCGTTTCTGATCCCGTGCT
CAGATGGACCCGTTATCAGGTCGTCCGTTGTCCTCGTGATGTGGGCCTCCTGCCGTATTTCATTGACGTATCTCCCGTGT
ATGTTGTCAAATCAGTTAAATCGCCTACTGCATTTATTACTATCTGTTGAGGAGATCGCCGTCCTGGTCCTTCAACAATG
CCAACGGAACGGAGACTTTTCTGAGCCTACCTGGTCTGTCGCGAACGACGGGTCCATCCAACATGATCTTAGCATACCAC
ATCTACCTCCGCCCCTCACTCCTGTTCTCCAGACCACCTTTCTCCTCCGAATAGCCATGTACGCCGGGCCAAAACACCAG
ATGTCGGCATCAGGATCTTGTCCTCAACCGGGCATCATCAGGAACTACTCCCCATCGCCTGCTGGTTGTGTGGAGATAGG
CTCGACACATCCATCAGTAGGCGGCTGCAGGAGCAATTCATTACCCAGATGTCTGCTGACCGTACACATTGGGCACCATC
AGAGACCAAATCAAATGACAGATAAAACCGCAAGTTATCACATAGCCCTCGTGGTATGACAAAGATAAGTCCAAGCATCC
CACTAATTGAACACGTACAATCAAATACAGACTACAACCTGGAGTCCAGTACAACACCGTTTCTAGAAAATTCATGTCGA
TTCAATCGACTGTGTCGGCGAGGTACTCTTCCGTCTTTCCATGTTCTCCTCCCCGCCGTAGGTCCGCGGCTGGATAGCTG
CAACCGCGCACGACGAGAACGGTCTAAATTCTGAGCCACGTATCTTATTCTGTGCCACGGGCTGGAATCTAACACACCAC
GGCATCCCGTCAGGGAATCGAAACCAACACCATGCCTACGCTCAGGACCCACCGTATCCGCACTGTTCTCTACCCCTGCC
ATGAATACGCTCACTTTTTACAGCTCGCACTGCACCTGCCAGCCCCTATTTTCATCAATCCCCATGCCTGGACCTATGGA
CATGATTTCAGGTCCAGCTGAGCTCGGGCGCTGAAACGCCCTGTCCATATCCATATATACATATGTAGAGCAAGAAACCT
ATGTATAACATGTAAAACTTATTTAGTATTTATTATATGTGTCCTTTTTT---CAAAAACAGGGGAACGCCCTCGACCTC
AGTCATTATATA-----TTTTTTCTTTGAAAAGGAGGTTGAACCCCTCGCCTCTGCATCGAGTGATGCACACAGTCATTT
TTATTACTCCCTCCAATTTGAATTAATTGACTCAGCCTTGTATAGAGGTTGCGTCAATGAATTTGGATCGGAGGGAGTAA
TATTATTCAACAATGCCTTATAAGAT-AAAACATCGATCCTTCTTCCAACCTCTAGGCAATAAAGACA-CACCACCTCCA
AACTTGGTGATAATGGTGGTCTTGATCAGGGTTGCTTGCCCTGACCTCACCCCTACGCACATCATCTAAAATCGGAGCAC
CGGTCCGGCAGACCATTGGCGCACACCGCATGCGCATGCTCCATAAGTCAGTTGATGTTCTCTTCCACAAACCCATTTTC
GGGGCAGGGATAAATGAAATGACCTTGTCAGGTTGCCGC-CTGCCACCACGACACCAGACAGCGTCATCGCCCTACGCTC
ATCAATCATCATGAGTCCGCCGCCGAGACCCGGCTACAACACATCGTCGAGACTTGTCGTCTTCTACTCGGAAGAAACCA
TGCCGTTCCACCACATGACCTCTCCAGACAACACCTGCTCCAAAGAAGTGATGCTGTCAAGAGGAAAAACGACGTTGTGT
GCTGCCATCGTCTGATCCAGGAGACCTAAATTTAGGGTTTCCCTAACAACCTGAGCAGGAAGACGACATCTGCAACAACG
ATGCCTTCAACAAAAAAATGACGCAAATACGCCACCATCATTTGCCATGACTGAAATCAGCGTGGTTTTCAACGGCAGCC
ACACCCCTCCAAACCGGCAGGCGTCTTTTGATCCGTTAACCCCGGAGGACTATGGATCGCCCGCACCAAGTGCCATAGAC
ACTGGAGAAAGCTTCGACTGCCATGCGTCTCCTATGACGTACCTAGGTACAGAATCCCTTGGC----------CAAGCAA
TGTCACATGGAGCTGCCTCCTAGCCCACCATCCCC-----GACAGAGAGGGGTTGCCTCCATTGCCGTGTACGGAGCTGC
CCCGGGGCCCTTCCGCCGTAGATCGGTCACACCCCCTACCGAGTCCTCCATCCTCGCGATTCAACCAGAGCGCCACCGGG
AGGAGCAGACGTTGTGCACTGCGCCTCTAGACAGCCACGATCGTGGGACACTAGATCCCTGCCACCCCCTTCACCAGCGG
CGCACGG-CTTTCCCGATGGCCACCTG--TGGGGATGACGAGGGGAGAGGGGAGGGCGGAGGGGTTGGCGGAAGAGGGGG
TAAGGTTTTGCGCCCCCGGTCGCCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAGAGTCCATGTA
TATCTGCCATTACATGTGTCATTGGTATTTCATCTTGATGATGACCCTACTCTTCTAAACTAAGGGATCCTCTAAATCAA
AAGGGATTTCAAAGGGTTTCGAAGT
>chr4D_1880
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-----------------------------------TGACTAATTAATATCCTTGGATGGCGAACTAGGTTTGGCACTGCA
CCATGTCCTCCATGGAGGAGCTA------GCATGAACCATACTGGCTCCATGGCCACCGTTTACTTGGATCAAAACCCTA
CTATTCATCAGCAGTAGCAACTCATCATGAAGAGGCTCTCCTTAGAGCACGTGCTCAACATGTCTCTGGCTATAACCCAG
CTTTGATTGTCCAAGAATCCTCTTCATCGAGAAATGATTATCACGCCATGAACCGCTACCACTATGAAAGACGGCCGCTG
CAAGCTGCTACGACGGAGCACA------------ACGATGATCATATCCATGGTCGCGATATAAACCTGGATCTCTCGCT
CGATGTCGGTGGTGGACAGCGGCCAGAGTTGAAGAGCAAGAGAGGCTGCACCAAATGGGGGAAACAAGCAGAAGAAGATG
ATGACGATCAGGTTGATGTCAATAAAGAATTGAAGAGCACTGCTACTAGACTATCTCTATGCCTATTCTCTCCTAGTCGT
AGTACTCTTGAATCTTGATCG-----------------------------------------------------------
-------------------------------------------------------------------AAAGGGGAGTAGT
GCTAGTTATCATGCACTAGGTCTAGATGTCAATGCAGATAATGTTGGGGAA-----------------------------
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>chr4D_2701
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-----------------------------------------ACCCCCCGCCTCTGCATCGAGTGATGCACACAGTCATTT
TTACTACTCCCTCCAATTCGAATTAATTGAGTCAGCCTTGTATAGAGGTTGCGTCAATTAATTTGGGTCGGAGGGAGTA-
TATTATTCAACAATGCCTTATGAATAAAAAACAACAATCCTTCTTCCACCCTCTAGGCAATAAAAGTCGCACCACCTTCA
AACTTG---ATAATGGTGGTCTTGATCAGGGTCGCTTGCCCTGACCTCACCCCTAGGCACATTATCTAAAATCAGAGCAC
CGGTCCGGCAGACTATTGGCGCACACCGCATGCACATGCTCCATAAGTC-GTTGATGTTGTCTTCCACGAACCCATCTTC
GGGGCATGGATCAATGAAATGATCTTGTCAGGCCTGTCGTCTGCCACCACAACACCAGACAGTGCCACCGTCCTACGCTC
ATCAATCATCACGAGTCCACCGTCGAGACCCGGCTACACCACGTCGTCGAGACTTGTCATCTTCTACTCAGAAGAAACCA
TGCGGTTCCACCACAGGACCCCTCTAGACAACACCTGCTCCAAAAAAGTGATGCCACCAGGAGGAAAAACGATGTTGCGT
GCTGCCATCGTCTGATCCGGGAGACCCAAATCTAGGGTTTCCCCAGTAGCCTGGGCGGGAAGACGACATCTGCAACAATG
ATGCCTTCAACAAAAAAACGACGCAAATACGCCACCATCATCTGCCATGACCGAAGTTAGCGTGGTTTTCAACGGCAGCC
ACACCCCTCCGAACCAGCAGGCGG-TTTCGATCCGTAAACCCCGGAGGACTATGGATCGCCTGCATCAAGTGCCATAGAC
ACCGGAGAAAGCTCCGACCGCCATGTGTCTCCTATGACGTACCTAGGTACGGGATCCCTTGATCTGCCACCGACAAGCAC
CGCCACATGAAGCTGTCTCCTAGCCCGACCCACCATCCCTGACGAAGAAGGGTTGTCGCCATCGCCGTGTACGGAGCT--
---GGGGACCTTCCGCTGTAGATCGGTCACACCCCCTACCAGGTCCGCCATCCCCGCGATTCAACCGGAGCGCCACCGGG
AGGAGCAGAGGTCGTGCACTACGCCTCTAGACAGCCACGGTCGTGGGACACTAGATCCCTGCCATCCCCTTCACCGGCGG
CGCACGGGCTTTCTCGATAGACACCTG--TGGGGATGACGAGGGGAGAGGGGAGGGCGGAGGGGTTGGCAGAAGAGGGGG
TAAGGTTTTGCGCCCCCGGTCACCCTGGAGGAGGCTACACAAGGGACGCGAGAGGAGGGCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GAGAAAGAGAGAGTCCATGTA
TATCTGCCATTATATGTGTCCTTGGTATTTCATCTTGATGATGACCCTACTCTTCTAAACTAAGGGATCCTCTAACTCAA
AATGAGTTTCAAAGGGTTTTTAAGT
>SNPs
--------------------------------------------S-----------------------------------
----------------------S-------------------------------------------S-------------
-----------------------------------S---------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------SS--------------
-------------------S---S------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------S-----------------------------------
-------------------------------------------S--------S-----S---------------------
S------------------------------------------------------------------S------------
----------------------------------------------------------------SSSSSS----------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S-----------S-----------------------------------S--
-------------------------------------------------------S------------SSS--------S
------SS------------------------------------------------------------------------
----------------------------------S--S----------------------S---------S---------
------S-------------------------------------------------------------------------
---------S--------------------------------S-------------------------S-----------
---------S-------------------------------------------S-----------------------S--
S----------------SSS--------------------------------------------S---S-S---------
----------------------------------------------S---------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
----------------SS--------------------------------------------------------------
-------------S---------------------------------------------------------------S--
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------------S-------------------------S-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-S------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
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------------SSSS-----------------S----------------------------------------------
--S----------S-----S--------------------------------S---------------------------
---------------------------------------------S----------------------------------
------S------------------------------------------S------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S---------S--------------S-------S-
-------------------------------------------S----------------------------------S-
--------------S------------SS----------S-------------------------------S---S----
--------------------------S-----------------------------------------------------
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-------------------------
>forward_713
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-----------------------------------------------------TTCTAGGACCCACCGATTGC-------
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>reverse_2010
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---------TTGACGATGGGCCTTCAGAT---------------------------------------------------
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>forward_1847
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------------------------------------------------------------------GCAGTTGCAACTCC
TAAGCTG-------------------------------------------------------------------------
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>reverse_5496
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-------------------------------------------------------ACGATTCAACCAGAGTGCCA-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
