>input_sequence_49529
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-------------------------------------------------------------ATGTCCCGCCACCCCGCTC
GCCACTTCCTCCCGTTGCTTCGCCGCCGCCACCTCCACCATTCGGTCCATCTCCCCTACACATCCGTGCCCATTCCCCCC
GACGCGATCCCCTCCACCTCCATCCCGTCGTCCACGTCCCCGCCGCCGTTTCATCCCGCGCCCTGGCCGCAGTCGTGTTC
GCCCACCTCCACGCCGCTCCCGCCTTTCACGGCCTCCCACCTCCGCGCGGCCGTCTCCTCCCTCGCCGCCTCTCTTCTGG
CTCTGCCCGACCCGGATCCCGACCCCCTGCCCGCCCTCCACGCCCATTCATTCCCCACCATCCTCGCAGTCTCACCGCTC
GCCTCCCTCGAGCTCCTGTCCCTCCTCCGCCCCAAGCCCTACCTCGGCCTCGCGGTCTTTTCGTTTCGCCGCACGCTTTC
GCCGCCGCCCACGCTCCCCGAGTTTGTCTTCGCCATCTCGCTTGCCAGCCGCGCCCGCGACCCCACCGCCGCGGCCAACA
TCTTCACCGACGCCTCCAGCGCCTACTGCCCCGACCAGGCGCTCTACAATGCCCTCATGGCCGCCTACATGCACAGTGGC
CTTGTGAATAGCTGCGTCGAGGCCTTCCACGCGCTGCGGCGTGATCCACGGTGTGGTCCGCCCAATGCGGACTCCTTCAA
CATCCTCATCGCTCTCTTCGGTCGCTCCCTCCTCGTCGACCACATGGAGGCTACACTCCAGTCGCTGGATGCCTCAGGAC
AGCCCCGTACAATTGGTACCTATAACGCAGTCATCGCTGGCTACCTCACGGCATGGATGTGGGACAAGATGGAAGCAGTG
TTCCATGAAATGATGCCAGGTGGAGTTGTTCCAGACACCACTACACATTTGTTGATGTTAAGAGGTTACTCACATGCTGG
GAAGATTTATAAGATGGAGCTGGCTTATGAGCGTGCTCGTGAGCATGCTGGCGAGGTTGATATAGTGCATATACGTGCAA
TGCTATGTGCATATTGCAAGTTTAAACATGTAGATAGGATTCAAAAGATCGAGGAGTTGCTTCTGAAGTTGCGTCCTGAG
GATTATAGGCCCTGGCTCAATGTGTTGTTAATTAGTGTGTATGCCAAGGAGGGGTTGGTTGAGGGGATGGAAAGAAGGAT
CGCTGAGGCATTGGAACGCAATACCACAGTCACCACAACACATGTGATGCGGTCCGTCATAACCAACTATTTCCAGTGTG
ACGCTGTCGACAGACTCGCACACTTTGTCCGGCAGGCTGAGGAGGCCGGATGGAAGCTGTGCCGGAGTTTATACCACTGC
AAGATGGTGATGTATGGGAAGCACCATCGACTTGCAGAGATGCATGGGGTGTTGGATGAGATGGAGTATTTTAGGTTTGA
CCGGACAAAGAAGACCTTCTGGATTCTGCACAAAGCATATCTGAGCTGTGGAAGAAGATCTGAGGCTGATACGATACTTG
GCATGATGTGGAAGCACGGTTTTGGATCCCCTTCTGGCGTATTTTTTCAATAA---------------------------
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>chr1D_1_TraesCS1D01G254600
CTAGAAACAACAAAACACAGGACCCTACCACCAAGGACCCTGGCGGTAGGGTCAGACACCCTACCGCCAGCC-CCA-TGG
CGGTAGGGCGCACCTACCGCCAGGGCCCTTGCATTTTTCGTTACAGAAACTTTACACTG-AAAAACACAGGACCCTACCG
TCAGGGGACCTGGCGGTAGGGTCACACAGCCTACCGCCAGGCCCCATGGCGATAGGGCGAACCTACCGCGAGGCCCCATG
GCGGTAGGGCGAACCTACCGCCAGGTCCACTGCACATTTCGTTACAGAAGGATTGTACGGCAAAACCCTGCCACACCCTA
CCGCCAAGGGCTCTGGCGGTAGGGTTAGACAGCCTACCGCCAGGCCCCCTGGCGGTAGGTACTTATCCACGTCAGCGCAG
TCAAACGGCCGCCGTCCCCCTCCGTCG-CACCCTACCGCCATGGGCCGTGGCGGTAGGCTGTATAACCCTACTGCCAGAG
-CCCTGGCGGTAGCAAAAAGGTCAAATCCCGATTTTTTTTATAACCGGGATCAGATCCTGAAATTCTTTGTCAAAAGGGT
CAAAACATGAAATTTAGCCCCTTCTCGAATGCGCTTCACCCGAGTCGCCTGTCATGGCAGAATGTCTCGTTTGACAGGAG
GTTTGCCAGAAACGAGTGCGAACACTTCTTTTTTAGAATATTTTCTGAG-----------------------ACAAACGT
CAACCGCATCTCAA------------------------------------------------------------------
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----------------------------------------AAACCCTGGATTTGAGAACTG--CCTCTCTCAC-------
-------------------TGGTCTGACCAGCAAGGCCCGTGAAGCCGACATCACC----------GCAGGCCCGTTAAG
CCCACATCACTGGTCTGACCAGCCCGGTCCGTCAAGAGCACTCTTCAACCAGGCCGGGCCGAGCCGTCTCCAAGTTGTCA
GCTTGCTCAAGGCGACGCAAAAACGCTACGCCGAGCTGGCCGCCTTTGCCCCTCTTCTTCCTCTCCCCCCACATCGATCC
CTAAAACCCATCGCGCCGCCGCCGCCGCCGCCGCC---------GAATCCCTCCTCCTCCCATGTCCCGCCACCCCGCTC
GCCACTTCCTCCCGTTGCTTCGCCGCCGCCACCTCCACCATTCGGTCCATCTCCCCTACACATCCGTGCCCATTCCCCCC
GACGCGATCCCCTCCACCTCCATCCCGTCGTCCACGTCCCCGCCGCCGTTTCATCCCGCGCCCTGGCCGCAGTCGTGTTC
GCCCACCTCCACGCCGCTCCCGCCTTTCACGGCCTCCCACCTCCGCGCGGCCGTCTCCTCCCTCGCCGCCTCTCTTCTGG
CTCTGCCCGACCCGGATCCCGACCCCCTGCCCGCCCTCCACGCCCATTCATTCCCCACCATCCTCGCAGTCTCACCGCTC
GCCTCCCTCGAGCTCCTGTCCCTCCTCCGCCCCAAGCCCTACCTCGGCCTCGCGGTCTTTTCGTTTCGCCGCACGCTTTC
GCCGCCGCCCACGCTCCCCGAGTTTGTCTTCGCCATCTCGCTTGCCAGCCGCGCCCGCGACCCCACCGCCGCGGCCAACA
TCTTCACCGACGCCTCCAGCGCCTACTGCCCCGACCAGGCGCTCTACAATGCCCTCATGGCCGCCTACATGCACAGTGGC
CTTGTGAATAGCTGCGTCGAGGCCTTCCACGCGCTGCGGCGTGATCCACGGTGTGGTCCGCCCAATGCGGACTCCTTCAA
CATCCTCATCGCTCTCTTCGGTCGCTCCCTCCTCGTCGACCACATGGAGGCTACACTCCAGTCGCTGGATGCCTCAGGAC
AGCCCCGTACAATTGGTACCTATAACGCAGTCATCGCTGGCTACCTCACGGCATGGATGTGGGACAAGATGGAAGCAGTG
TTCCATGAAATGATGCCAGGTGGAGTTGTTCCAGACACCACTACACATTTGTTGATGTTAAGAGGTTACTCACATGCTGG
GAAGATTTATAAGATGGAGCTGGCTTATGAGCGTGCTCGTGAGCATGCTGGCGAGGTTGATATAGTGCATATACGTGCAA
TGCTATGTGCATATTGCAAGTTTAAACATGTAGATAGGATTCAAAAGATCGAGGAGTTGCTTCTGAAGTTGCGTCCTGAG
GATTATAGGCCCTGGCTCAATGTGTTGTTAATTAGTGTGTATGCCAAGGAGGGGTTGGTTGAGGGGATGGAAAGAAGGAT
CGCTGAGGCATTGGAACGCAATACCACAGTCACCACAACACATGTGATGCGGTCCGTCATAACCAACTATTTCCAGTGTG
ACGCTGTCGACAGACTCGCACACTTTGTCCGGCAGGCTGAGGAGGCCGGATGGAAGCTGTGCCGGAGTTTATACCACTGC
AAGATGGTGATGTATGGGAAGCACCATCGACTTGCAGAGATGCATGGGGTGTTGGATGAGATGGAGTATTTTAGGTTTGA
CCGGACAAAGAAGACCTTCTGGATTCTGCACAAAGCATATCTGAGCTGTGGAAGAAGATCTGAGGCTGATACGATACTTG
GCATGATGTGGAAGCACGGTTTTGGATCCCCTTCTGGCGTATTTTTTCAATAACAGGTCAGTACACACCTCTATTCTTAT
TGCATTGACTGCTATTCATAAATTTATGTTCTTTTTGCATAAGATGGCATACTTTCGTTGCAGACGCAGGCATTTAATCT
TTGATTTAGCGAACTTGGGCAACAACAAAGACAAGGACACATCCAAAATTTGAATTACGGTAGTAGTGCAATTGTTGTGT
AGAAGAAACAATGAGCCTCTATTCACTATTCAAAAGTGCTGCAATGGCTCGTCCATTTATTATGTGATCAGGTCGTAAGG
CATTTTATAATTTTCTTATTCTCTAGCATCTTAGGTAATTCAATCAATCTTGTCTGGATTAGATGTATATTTTCAGCCGC
TTACCTAGAGATAACATG-AAAAAAATACTCCTTCATGGTTAGACCATGAATAATGGTTATTTGTTTTTAAGCCACCCGG
CATCACAATCCGAGCAGACTTTTACTGTGAATAAAATGAAGCCTAAATCATTGATTCACATTCTCAATTT-CAGTGTCTC
AGAGTCTTTGCTTACTCCTATATTGTGTGATGTTACAGCATAACTGGCTGCGAGTTAGCATTTTGAAAAAAAAATGCTTC
TTTTTTTACACACAGTTCGAGTCACTTGTTGACTCACGATTACACCTGTTAAAAGTTTCCCTCTCAATCTCTCTTTCAAT
TCGAGGATCCAGAGAGGTGTTTTCATAGTGGTTTCAGTGTTTAGCATTGCATTTTATTGCAATTAAATATACTTATACTC
CGACAACTGCATATATTTTCACACTGGCTGGGAGTTACGTTTCAGTGT-----TTATAGATGCTTCCCTTTGCACTTATA
TG-------TCTCCAACAACTGCATATATATGCAGGCAGAAGCTCTTCTTAGCCTACGTTTTCTATGCCCGTATTCCTCT
GTAGTTTACTGC--------------------------------------------------------------------
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-------------------------------------------------------TTATTATAGGAAATATTTTGTTCTA
TGCAGTTTGATCCATAGGAATTTT-TTTCACGCACCCGTATTGTTCTGTATCAAAAAGTAAAGACTGTCTA
>chr3D_1
CTAGAAACAACAAAACACAGGACCCTACCACCAAGTACCCTGGCGGTAGGGTCAGATACCCTACCGCCAGCC-CCCTTGG
CGTTAGGGCGCACCTACCGCCAGGGCCCTTGCACTTTTCGTTACAGAAACTTTACACCGG-AAAACACAGGACCCTACCG
CCAGGGGCTCTGGCGGTAGGGTCACACAGCCTACCGCCAGGCCCCATGGCGGTAGGG-----------------------
---------TGTACCTACCGCCAGGTCCACTGCACATTTCGTTACAGAAGGGTTGTACGGCAAAACCCTGCCACACCCTA
CCGCCAGGGGCTCTGGCGGTAGGGTTAGACAGCCTACCGCCAGGCCCCCTGGCGGTAGGTACTTATCCACGTCAGCGCAG
TCAAACGGCCGCCGTCCCCCTCCGTCG-CACCCTACCGCCATGGGCTGTGGTGGTAGGCTGTATAACCATACCGCCAGAG
CCTCTGGCGGTAACAAAAGGGTCAAATCCCGAAATTTTTTGCAACCGGGCTCAGATCCTGAATTTCTTACCAAAAAGGGT
CAAAACACGAAATTTTGCCCC-----------------------------------------------------------
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>chr5D_1
CTAGAAACAACAAAACACAGGACCCTACCGCCAAGTACCCCGGCGGTAGGGTCAGACACCCTACCGCCAGCCTCCA-TGG
CGGTAGGGCGCACCTACCGCCAGGGCCCTTGCACTTTTCGTTACAGAAACTTTACACTGG-AAAACACAGGACCCTACCG
CCAGGGGCTCTGGCGGTAGGGTCACACAGCCTACCGCCAGGTCCCATGG-------------------------------
-CTGTAGGGTGAACCTACCGCCAGGTCCACTGCACATTTCGTTACAGAAGGGTTGTTCGGCAAAACCCTGCCACACCCTA
CCGCCAGGGGCTCTGGAGGTAGGGTTAGACAGCCTACCGCCAGGCCCCCTGGCGGTAGGTACTTATCCACGTCAGCGCAG
TCAAACGGCCGCCGTCCCCCTCCGTCG-CACCCTACCGCCATGGGCCGTGGCGGTAGGCTGTATAACCCTACCGCCAGAG
CCTCTGGCGGTAACAAAAGGGTCAAATCCCGAAATTTTTTGCAACCGGGGCCAGGTCCTGAATTTCTTACCAAAAAGGGT
CAAAACACGAAATTTAGC--------------------------------------------------------------
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>chr4D_1
CTAGAAAAAACAAAACAGAGCACCCTACCGCCAAGGCCCCTGGCGGTAGGGTCAGACACCCTACCGCCAGCCCCCA-TGG
CGGTAGGGCGCACCTACCGCCAGGGCCCTTGCATTTTTTGTTACAGAAGCTTTACACTGGAAAAACACAGGACCCTACCG
CCAGGGGACCTGGCGGTAGGGTCACACAGCCTACCGCCTGCCCCCATGG-------------------------------
-CGGTAGGGTGAACCTACCGCCAGGTCCGTTGCACATTTCATTACAGAAGGTTTGTACGGCAAAACCCTGCTACACCCTA
CCGCCAGGGGATTTGGCGGTAGGGTTAGACAGCCTACCGCTAGGCCCCCTGGCGGTAGGTACTTATCCACGTCAGCGCAG
TCAAACGGCCGCCGTCCCCCTCCGTCGGCACCCTACCGCCAGGTGCTTTGGCGGTAGGCTGTCTAACCCTACCGCCAGAG
TCCCTGGCGGTAGCAAAAGGGTCAAATCCCGATTTTTTTTGAAACCGGGGTCAGATCCTAAAATTCTTTGTCAAAAGAGT
CAAAACACGAAAATTTGCC-------------------------------------------------------------
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>chr4D_1
CTAGAAACAACAAAACAGAGGACCCTACCGCCAAGGTCCCTGGCGGTAGGGTCAGACACCCTACCGCCAGCCCCCA-TGG
CGGTAGGGCGCACCTACTGCCAGGCCCCTTGCTTTTTTCGTTACAGAAGCTTTACACTGGAAAAACACAGGACCCTACCG
CCAGGGGACCTGGCGGTAGGGTTACACAGCCTACCGCCTGCCCCGATGG-------------------------------
-CGGTAGGGTGAACCTACCGCCAGGTCCATTGCACATTTCGTTACAGAAGGATTGTACGGCAAAACCCTGCCACACCCTA
CCGCCAGGGTATCTGGCGGTAGGGTTAGACAGCCCACCACCAGGCCCCCTGACGGTAGGTACTTATCCACGTCAGCGCAG
TCAAACGGCCGCCGTCCCCCTCTGTCGGCACCCTACCGCTAGGTGCTTTGGCGGTAGGTTGTCTATTCCTACCGCCAGAG
CCCCTGGCGGTAGCAAAAGGGTCAAATCCCGATTTTTTTTTAAACCAGGGTCAGATCCTAAAATTCTTTGTCAAAAGGGT
CAAAACACGAAATTTAGCCCCTTCT-------------------------------------------------------
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>chr4D_1
CTAGAAACAACAAAACAGAGGACCCTACCGCCAAGGCCCCTGGCGGTAGGGTCAGACACCCTACCGCCAGCCCCCA-TGG
CGGTAGGGCACACCTACCGCCAGGGCCCTTGCTTTTTTCGTTACAGAAGCTTTACACTGGAAAAATACAGGACCCTACCG
CCAGGGGACCTGGCGGTAGGGTCACACAGCCTACCGCCTGCCCCCATGG-------------------------------
-CGGTAGGGTGAACCTACCGCCAGGTCCATTGCACATTTCGTTACAGAAGGTTTGTACGGCAAAACCCTGCCACACCCTA
CCGCCAGGGGATCTGGCGGTAGGGTTAGA---CCTACCGCCAGGCCCCCTGGCGGTAGGTACTTATCCATGTCAGCGCAG
TCAAACGGCCGCTGTCCCCCTCCGTCGGCACCCTACCGCCAGGTGCTTTGGCGATAGGTTGTCTAACCCTACCGCCAGAG
CCCCTGGCGGTACC-AAAGGGTCAAATCCCGAATTTTTTTGAAACCGGGGTCAGATCCTAAATTTTTTTGTCAAAAGGGT
CAAAACATGAAATTTAGCC-------------------------------------------------------------
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>chr1B_575
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-------------------CCTTCTCGAATGCGCATCATCCGAGTCGCCTGTCATGGCAGAATGTCTCGTTTGACAGGAG
GTTTGCCAGAAACGAGTTCGGACACTTTTTTTTTTGAGATTCTTTTTTTGAGACAAACGAGTGCAAACACATACAAACGT
CAAGCGCAACTCGA------------------------------------------------------------------
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----------------------------------------AAACCCTGGATTTGAGCGTTGCTCCTCTCTCACT------
--------------------GGTCTGACCAGC-AGGCCCGTCAAGCCCACATCACTGGTCTGACCAGCAGGCCCGTCAAG
CCCACATCGCTGGTCTTACCAGCCAGGCCCGTCAAGAGCACTCTTCAACCAGGCCGGGCCAAGCCGTCTCCAA-------
GCTTGCTCAGGT-GACGCAAAAACGCTACGCCGAGCTGGCCGCCTTTGCCCCTCTTCTTCCTCTCCCCCCACATCGATCC
CTAAAACCCATCG------------CGCCGCCGCC---------GAATCCCTCCTCCTCCCATGTCCCGCCACCCCGCTC
GCCACTTCCTCCCGTTGCTTCGCCGCCGCCACCTCCACCATTCGGTCCATCTCCCCTACACATCCGTGCCCATTCCCCCC
GACGCGATCCCCTCCACCTCCATCCCGTCGTCCACGTCCCCGCCGCCGTTTCATCCCGCGCCCTGGCCGCAGTCGTGTTC
GCCCACCTCCACGCCGCTCCCGCCTTTCACGGCCTCCCACCTCCGCGCGGCCGTCTCCTCCCTCGCCGCCTCTCTTCTGG
CTCTGCCCGACCCGGATCCCGACCCCCTGCCCGCCCTCCACGCTCATTCATTCCCCACCCTCCTCGCAGTCTCGCCGCTC
GCCTCCCTCGAGCTCTTATCCCTCCTCCGCCCCAAGCCCTACCTCGGCCTCGCGGTCTTTTCGTTTCGCCGCACGCTTTC
GCCGCCGCCCACGCTCCCCGAGTTTGTCGTCGCCATCTCGCTTGCCAGCCGCGCCCGCGACCCCACCGCCGCGGCCAACA
TCTTCACCGACGCCTCCAGCGCCTACTGCCCCGACCAGGCGCTCTACAATGCCCTCATGTCCGCCTACATGCACAGTGGC
CTTGTGAATAGCTGCGTCGAGGCCTTCCACGCGCTGCGGCGTGATCCTCGGTGTGGTCCGCCCAATGCGGACTCCTACAA
CATCCTCATCGCTCTCTTCGGTCGCTCCCTCCTCGTCGACCACATGGAGGCCACACTCCAGTCGCTGGATGCCTCAGGAC
AGCCCCGTACAATTGGTACCTATAACGCAGTCATCGCTGGCTACCTCACGGCATGGATGTGGGACAAGATGGAAGCAGTG
TTCCATAAAATGATGGCAGGTGGAGTTGCTCCAGACACCACTACACATTTGTTGATGTTAAGAGGTTACTCACATGCTGG
GAAGATTTATAAGATGGAGCTGGCTTATGAGCGTGCTCGTGAGCACGCTGGCGAGGTTGATATAGTGCATATACGTGCAA
TGCTATGTGCATATTGCAAGTTTGAACATGTAGATAGGATTCAAAAGATCGAGGAGTTGCTTCTGAAGTTGCGTCCTGAG
GATTATAGGCCCTGGCTCAATGTGTTGTTAATTAGGGTGTATGCCAAGGAGGGGTTAGTTGAGGGGATGGAAAGAAGGAT
CGCTGAGGCATTGGAACGCAATACCACAGTCACCACAACACAGGTGATGCGGTCCGTCATAACCAACTATTTCCAGTGTG
ACGCTGTCGACAGACTTGCACACTTTGTCCGGCAGGCTGAGGAGGCGGGATGGAAGCTGTGCCGGAGTTTATACCACTGC
AAGATGGTGATGTATGGGAAGCACCATCGACTTGCAGAGATGCATGGGGTGTTGGATGAGATGGAGTATTTTAGGTTTGA
CCGGACAAAGAAGACCTTCTGGATTCTGCACAAAGCATATCTGAGCTGTGGAAGAAGATCTGAGGCTGATACGATACTTG
GCATGATGTGGAAGCACGGTTTTGGATCCCCTTCCGGCGTATTTGTTCAATAACAGGTCAGTACACACCTCTATTCTTAT
TGCATTGACTGCTATTCACAAATTTATGTTCTTTTTGCATAAGTTGGCATGCTTCCGTTGCAGACGCAGGCATTTAATCT
TTGATTTAGCGAACTTGGGCAACAACAAAGACAAGGACACATCTAAAATTTGAATTACGGTACTAGTGCAATTGTTGTGT
AGAAGAAACAATGAGCCTCTATTCACTATTCAAAAGTGCTGCAATGGCTCGTCCATTTATAAAGTGATCAGGTCGTAAGG
CATTTTATAATTTTCTTATTCTCTAGCATCTTAGGTAATTCAATCAATCTTGTCTGGATTAGATGTATATTTTCAGCCGC
TTACCCAGAGATAACATG-AAAAAAATACTCCTTCATGGTTAGACCATGAATAATGGTTATTTGTTTTTAAGCCACCTGG
CATCACAATCCGAGCAGACTTTTACTGTGAATAAATTGAAGCCTAAATCATTGATTCATATTCTCAATTTACAGTGTCTC
AGAGTCTTTGCTTACTCCTATATTGTGTGATGTTACAGCATAACTGGCTGCGGGTTAG----------------------
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------------------------------GTTTCAGTGTTTAGCATTGCATTTTATTGCAATTAAATATACTTATACTC
CAACAACTGCATATATTTTCACACTGGCTGGGAGTTATTTCAGTGTTTATAGATTATAGATGCTTCCCTTTGCACTTATA
TG-------TCTCCAACAACTGCATATATATGCAGGCAGAAGCTCTTCTTAGCCTACGTTTTCTATGCCCGTATTCCTCT
GTAGTTTACTGC--------------------------------------------------------------------
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-------------------------------------------------------TTATTATAGGAAATATTTTGTTCTA
TGCAGTT-GATCCATAGGAATTTT-TTTCACGCACCCGTATTGTTCTGTATCACAAAGTAAAGACTGTCTA
>chr1A_575
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-------------------CCTTCTCGAATGCGCTTCACCCGAGTCGCCTGTCATGGCAGAATGTCTCGTTTGACAGGAG
GTTTGCCAGAAATGAGTACAAACACAA----------------TTTTTTGAGACAAAGGAGTGCGAACACATACAAACGT
CAACCGCATCTCGTAAGGCCACTGCTACAAATCAACCGACTGATTTCGGGAGAAACCAGTCGGGTCCGCAGCCATTCGAT
TCATCCTCCCTACCCGTAGATGGGGTCAAACGCATCAGCTTGCTCCCGGCTTTCTCCTCTCGAGTCAGCAAACACAGACA
AGTCGCACGCAGCACACCTCTCCAGCACCGTCGCTCCAGTGCTGCTACATGGTAGGAGAACCACCCCCGTGGCCGGTGAC
GACGTGGCTTCATTGCAGCATGGTGGCCAGCGACGAGGGCTTCGTTGTAGCACCGGCGGCCAGCGACGAGGGCTTCATTG
CATCACCCGTGGCTTCCATTGCAACGTCGGTAGTTGGCGATGAGGGCTTCATTGCAGCACCCGGAGGCCGGCGCCGAGAG
CTTTCATCGCAGCACCGGTGGTCGGCGAGCGCTCCATTGCAGCGCCGAGGAGCGCTCCATTGTAGCGCCGGGAGGGAGCG
CTGACGAGCACTCATTGGAGCACGGCGAGCGCTCCATTGCAGCTCCGCCGCCCCGTGACTTGCAGCACCAGCAGCCCCCG
ACGAGGTTGCAACGCAGCGAGGCGGTCGGGGACGAGTTGCTGCGTTAAAGCACCAACAGTCGTTGAGACGAGCGGTGCGT
GGCTAGCTCGTGCTGCTACTGTGAAACACGGCAGTGGTGCGTGGCGAGCTCGCATCAACCGCCTAGGAACTCCGATGTGC
ACTATTTCGGCCGCGGAGCTTGCTGCATATTGGCCGGGAGAGGTAGCGAGTGGTGTGCGATGGCGGCTTCACGTCCAAAG
GATAAGGCCACCGATGGAAAGGGAAACGAATGGCTCTCCCGTAACCGCGAGAGATAAGGCTAGTCATAATGGGATAACTT
AGGTAGTAACTTAACATACCCCAAGACAATTTTGCTTATGTGACAAGTATTTAATGAGATGAGAGGTGTTTGGAATAACA
TAATACTCCCTCCGTCCCAAAATAAGTGTGTCAAGCTTAGTACAACTTTGTACTAGAGTTAGTATAAAGTTGAGACACTT
ATTTTGAGACGGAGGAAGTATGTTATTGTAACATAGCGCTTCCCGAGGTAAAATGAGTCTATAAGGCAATAAATGAAACA
TTCTATGACACTACTACTATGATACTTTGCACCATGAAAATAGTAATTTAGACTAATGTCATATGCATGACACTAGTATA
AATTACTCCCACTATAACCAGCCTAAGGGAGAAAAACGCGTGATAGATGGTCTCCACGGGGACGCGTGGCGTGTGGCATG
CGAGGAGCGTGGCGGATGTTTTAAAGAGTTTTCCATCTCGAAACCCTGGATTTGAGAGTTGCTCGTCTCTCACTTTTTTT
TTGAGAAACCTCTCTCACTTGGTCTGACCAGCAAGGCCCGTCAAGTCGACATCACT----------GCAGGCCCGTTAAG
CCCACATCACTGGTCTGACCAGCCAGGCCCGTAAAGAGCACTCTTCAACCAGGCCAGGCCGAGCCGTCTCCAAGTTGTCA
GCTTGTTGAGGT-GACGCAAAAACGCTACGCCGAGCTGGCCGCCTTTGCCCCTCTTCTTCCTCTCCCCCCACATCGATCC
CTAAAACCCATCG------------CGCCGCCGCCGCCGCCGCCGAATCCCTCCTCCTCCCATGTCCCGCCACCCCGCTC
GCCACTTCCTCCCGTTGCTTCGCCGCCGCCACCTCCACCATTCGGTCCATCTCCCCTACACATCCGTGCCCATTCCCCCC
GACGCGATCCCCTCCACCTCCATCCCGTCGTCCACCTCCCCGCCGCCGTTTCATCCCGCGCCCTGGCCGCAGCCGTGTTC
GCCCGCCTCCACGCCGCTCCCGCCTTTCACGGCCTCCCACCTCCGCGCGGCCGTCTCCTCCCTCGCCGCCTCTCTTCTGG
CTCTGCCCGTCTCGGATCCCGACCCCCTGCCCGCCCTCCACGCCCATTCATTCCCCACCCTCCTCGCAGTCTCGCCGCTC
GCCTCCCTCGAGCTCCTGTCCCTCCTCCGCCCCAAGCCTTACCTCGGCCTCGCGGTCTTTTCGTTTCGCCGCACGCTTTC
GCCGCCGCCCACGCTCCCCGAGTTTGTCGTCGCCATCTCGCTTGCCAGCCGCGCCCGCGACCCCACCGCCGCGGCCAACA
TCTTCACCGACGCCTCCAGCGCCTACTGCCCCGACCAGGCGCTCTACAATGCCCTCATGGCCGCCTACATGCACAGTGGC
CTTGTGAATAGCTGCGTCGAGGCCTTCCACGCGCTGCGGCGTGATCCACGGTGTGGTCCGCCCAATGCGGACTCCTTCAA
CATCCTCATCGCTCTCTTCGGTCGCTCCCTCCTCGTCGACCACATGGAGGCCACACTCCAGTCGCTGGATGCCTCAGGAC
AGCCCCGTACAATTGGTACCTACAATGCAGTCATCGCTGGCTACCTCACGGCATGGATGTGGGACAAAATGGAAGCTGCG
TTCCATGAAATGATGGCAGGTGGAGTTGTTCCAGACACCACTACACATTTGTTGATGTTAAGAGGTTACTCACATGCTGG
GAAGATTTATAAGATGGAGCTGGCTTATGAGCGTGCTCGTGAGCATGCTGGCAAGGTTGATATAGTGCATATACGTGCAA
TGCTATGTGCATATTGCAAGTTTGCACATGTAGATAGGATTCAAAAGATCGAGGAGTTGCTTCTGAAGTTGCGTCCTGAG
GATTATAGGCCCTGGCTCAATGTGTTGTTAATTAGGGTGTATGCCAAGGAGGGGTTGGTTGAGGGGATGGAAAGAAGGAT
TGCTGAGGCATTGGAACGCAATACCACAGTCACCACAACACAGGTGATGCGGTCTGTCATAACCAACTATTTCCAGTGTG
ACGCTGTCGACAGACTCGCACACTTTGTCTGGCAGGCTGAGGAGGCCGGATGGAAGCTGTGCCGGAGTTTATACCACTGC
AAGATGGTGATGTATGGGAAGCACCATCGACTGGCAGAGATGCATGGGGTGTTGGATGAGATGGAGTATTTTAGGTTTGA
CCGGACAAAGAAGACCTTCTGGATTATGCACAAAGCATATCTGAGCTGCGGAAGAAGATCCGAGGCTGATACGATACTTG
GCATGATGTGGAAGCATGGTTTTGTATGCCCTTCCGGCGTATTTGTTCAATAACAGGTCAGTACACACCTCTATTCTTAT
TGCATTGACTGCTATTCATAAATTTATGTTCTTTTTGCATAAGTTGGCATACTTTTGTGGCAGACGCAGGCATTTAATCT
TTGATTTAGTGAACTTGGACAACAACAAAGACAAGGACACATCTAAAATTTGAATTATGGTAGTAGTGCAATTGTTGTGT
AGAAGAAACAACGAGCCTCTATTCACTATTCAAAAGTGCTGCAATGCCTCATCCATTTAATATGTGATCAGGTTGTAAGG
CATTTTATAAAAAAAATATTCTCTAGCATCTTAGGTAATTCAGTCAATCTTGTCTGGATTAGATGTATATTTTCAGCCGC
TTACCCAGAGATAACATGAAAAGAAGTACTCCTTAATGGTCAGACCATGAATTATGGTTATTTGTTTTTAAGCTACGTGG
CATCATAATCCGAGCAGACTTTTACTGTGAATAAAATGACGCCTGAATCATTGATTCATAGTCTCAATTTACAGTGTCTC
ACAGTCTTTGCTTACACCTATATTGTGTGATGTTACAGCATAACTGGCTGCAAGTTAG----------------------
--------------------------------------------------------------------------------
------------------------------GTTTCAGCGTTTCACATTGCATTTTATTGAAATTAAATATACTTATACTC
CAACAACTGCAGATATTT-CACACTGGCCAGGAGTTACGTTTCAGTGT-----TTATAGATGCTTCCCTTTGCACTTATA
TATCCTTATTCTCCAACAACTGCATATATATGCAGGCAGAAGCTCTTCTTAGCCTACGTTTTCTATACCCATATTCCTCT
GTAGTTTACTGATTATTATAGGAAATATTTTGTTCTATGCAGTTGATCCAACAAACAACAACAACAACAACAAAGCCTTT
AGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTCGCAACCAACTCATGGCTCTGGCACATGGATAG
CAAGCTTCCACGCACCCCTGTCCATAGCTAGCTCTTTGTCGATACTCCAATCCTTCAGGTCTCTCTTAACGGACTCCTCC
CATGTCAAAATCGGTCGACCCCGCCCTCTCTTGACATTCTCCGCACGCGTTAGCCGTCCGCTATGCACTGGAGCTTCTGG
AGGCCTGCGCTGAATATGCCCAAACCATCTCAAACGATGTTGGACAAGCTTCTCCTCAATTGGTGCTACCCCAACTCTTA
TCTCGTATATCATCATTCCGGACTTCTATACCCATATTCCTCTGTAGTTTACTGATTATTATAGGAAATATTTTGTTCTA
TGCAGTT-GATCCATAGGAAAAAAATTTCACGCACCCGTATTGTTCCGTATCACAAAGTAAAGACT-----
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------------------------------------------S-----SSSSSSSSSSSSSSSSSSSSSSS
S--------S----------------------------------------------------------------------
------S-------------------------------------------------------------------------
------------------------------------------------------------------------S-------
------------------S---------------------SS-------S------------------------------
--------------------------------------------------------------------------------
-----------------S---------S------S--SSS-S--S-SSS-------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------SS---------------------
-----------------------------------------S-------------S------------------------
------------------------S--S----------------------------------------------------
---------S-SS-------------------------------------------------------------------
-------------SSSSSSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S-------------S------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------S-----------------------------------
-------------------------------------------S------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------------------------------------------------------S--
----------------------------------------------------------S---------------------
----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------S---------------------------------------------S-----------------
>forward_2253
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-------------------------------------------------------------------------GTTGTCA
GCTTGCTCAAGGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3563
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------------------------------------------TGTGATGCGGTCCGTCATAA------------------
--------------------------------------------------------------------------------
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>forward_2336
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----------------------------------------------------------------------------ATCC
CTAAAACCCATCGCGC----------------------------------------------------------------
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>reverse_4318
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-----------------------------------------------------------------------------CGG
CATCACAATCCGAGCAG---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
