>input_sequence_49396
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-----------------------------------------ATGGCTAAGCTTGCCGCATTGGCTATGGTAGCGTTGCTT
GGCTGCGTGGCGCGGACGTGCCACGCTTCAGGGTATGGTGGGTATCCCAGCCCGGGCACGCCTAGCAGCTACCCT-----
-------------------------------------CCACCTCCACCCAGCCCAACGCCAACCCCGCCTAGCCCGAGCC
CTCCTCCTGCTGCGCCGGCGCTCGCGATCGGACACTACTACAAGACATGCTACAAAGCTGAACAGATCGTGAGGGATTCA
GTGAGAAAGGCGGTGTATGCCAACCGCGGCATCGGCGCCGGGCTCATCCGCCTTTTCTTCCACGACTGCTTCGTCAGGGT
ATGTAAACATGCAAAAGTGTCGCTACGTACGCACTCTTATACATATACTCCTTCATTTTCGGTTTATAAGGCTTATCTCA
AAATTTTAGTATTTTTATTTTATAAGGCTTGATTTGGTTGTTTCCCATCACAAATTCAGATTTCAATGTGCATTAAATCA
TTGCATGCAAGTATTAAGAGAAAATTGATCAATGCATGTACTTTATGCATGCATGCATTGGTTAGAGCATTAATTGGGTG
CTTTTGCAAACTTCAAAAAATATTTCACCACTCACCATCTACATTGGTTGGTGAGATTCTTGAATTAAGCCCTATAAACC
GGAAAGGAGGGAGTAACAATGTACTACATCGTGTAGTGTCAAAAATG---------------------CTCTTATATTAT
GAGACAGAGGGAGTATGTGATTGTGATGTCACAGGACGTGACGAGCAGAGTTCTTTTGTTGCGCAGGGGTGCGACGCCTC
GGTCCTCCTCGACCCGACGCCGGCCAACGCTCAGCCAGAGAAGCTCGGCATCCCCAACTTCCCGAGCCTGCGCGGCTTCG
AGGTGATCGACGCGGCAAAGGCGGCGCTCGAGGAGGCCTGCCCTGGAGTCGTCTCGTGCGCGGACATCGTCGCTTTCGCT
GGCCGCGATGCCACTTTCTTCCTCAGCAACGGGAGGGCGTATTTCGACATGCCGGCCGGCCGCTACGACGGGAACGTGTC
CCTCGCCAGCGAGACCCTCCCCAACCTGCCTCCGCCCTTCGCCACCCTCCAGACGCTCAAGGACATGTTCGCCTCCAAAG
GGCTCACCGCCGACGAGATGGTCACCCTCTCCGGCGCACATAGCGTCGGGGTCTCCCACTGCTCGTCCTTCTCGGACCGC
CTCCCTCCCAACCCCTCTGACCCCTCGGCCATGGATGCCACGCTCGCCGCGTCTGTGCAGGTAAAATGCAACCGCACTGG
TGACCCCGTGGTGGTGCAGGACTTCAGGACCCCGGGGGACCTAGACAACCAGTATTACAAGAACGTGCTCGATAAAAAAG
TATTGTTCAAGTCGGACGCCGCACTCCGTTCGTCGGAGACTGGGGCACAAGTGCTCCTCAACGCCTGGATCCCTGGGCAG
TGGGAGCAAAAGTTCAAGGCGGCCATGGTGAGGATGGGCAGTATCGAAGTGAAGACCAGGGCCAACGGGGAGATCAGAAA
ACAGTGCCGGTTTGT-------GAACTAG---------------------------------------------------
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>chr2D_1_TraesCS2D01G153800
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAA-GGTATTTTCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTAAAAAAATATTCGCG-GTAATATTAAAAATAGGCATGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCAAACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTAAAAAATC--TTTTTTT-GCGTATTATTTCTGTAA----TTTT
TTTT-AAAAAATGTATTATTTAAAAAAAA-TTAGCCAATTATAGACAATGCCAACAGCAGACCGGTGTAGTAGTAACCCA
GGAAACGATAATCCACTGGACACACATGGGGTACAATTATCAGACAATGCCAACAGCAAACGGGTGTAAGTACACACCCA
---CATGCATGCCAGCAGCTTCCTCCCACCTCCCAAGGAAACAAATGTTCATCCATCACCCCGAGTTCATTGCGGCACAC
GATGTAGCATCAATTATGAA---AACCTATTGGCACGT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AATGTCAACCAGTCCGAGCTGT---GAGGTTACCCTCCCCGCGTCTCCGCTTGACTTTGCTCTCCAA
GCTAGTGTAAAGAAGTCATTATTCCATGCGAGCAAGTTTGTC------GATGTTCGAATTCGAACTACATAACGCATGGA
GTATTGTGGACTTATAAATAGACCTGAGAAACAGCAAGCTTCCTTCACCCATCGTCCTCCCATTGCTCGAGGCAACACAC
AAGTAACACAGGGAGCACAGATACGTTCGGCCATACCGAAGATGGCTAAGCTTGCCGCATTGGCTATGGTAGCGTTGCTT
GGCTGCGTGGCGCGGACGTGCCACGCTTCAGGGTATGGTGGGTATCCCAGCCCGGGCACGCCTAGCAGCTACCCT-----
-------------------------------------CCACCTCCACCCAGCCCAACGCCAACCCCGCCTAGCCCGAGCC
CTCCTCCTGCTGCGCCGGCGCTCGCGATCGGACACTACTACAAGACATGCTACAAAGCTGAACAGATCGTGAGGGATTCA
GTGAGAAAGGCGGTGTATGCCAACCGCGGCATCGGCGCCGGGCTCATCCGCCTTTTCTTCCACGACTGCTTCGTCAGGGT
ATGTAAACATGCAAAAGTGTCGCTACGTACGCACTCTTATACATATACTCCTTCATTTTCGGTTTATAAGGCTTATCTCA
AAATTTTAGTATTTTTATTTTATAAGGCTTGATTTGGTTGTTTCCCATCACAAATTCAGATTTCAATGTGCATTAAATCA
TTGCATGCAAGTATTAAGAGAAAATTGATCAATGCATGTACTTTATGCATGCATGCATTGGTTAGAGCATTAATTGGGTG
CTTTTGCAAACTTCAAAAAATATTTCACCACTCACCATCTACATTGGTTGGTGAGATTCTTGAATTAAGCCCTATAAACC
GGAAAGGAGGGAGTAACAATGTACTACATCGTGTAGTGTCAAAAATG---------------------CTCTTATATTAT
GAGACAGAGGGAGTATGTGATTGTGATGTCACAGGACGTGACGAGCAGAGTTCTTTTGTTGCGCAGGGGTGCGACGCCTC
GGTCCTCCTCGACCCGACGCCGGCCAACGCTCAGCCAGAGAAGCTCGGCATCCCCAACTTCCCGAGCCTGCGCGGCTTCG
AGGTGATCGACGCGGCAAAGGCGGCGCTCGAGGAGGCCTGCCCTGGAGTCGTCTCGTGCGCGGACATCGTCGCTTTCGCT
GGCCGCGATGCCACTTTCTTCCTCAGCAACGGGAGGGCGTATTTCGACATGCCGGCCGGCCGCTACGACGGGAACGTGTC
CCTCGCCAGCGAGACCCTCCCCAACCTGCCTCCGCCCTTCGCCACCCTCCAGACGCTCAAGGACATGTTCGCCTCCAAAG
GGCTCACCGCCGACGAGATGGTCACCCTCTCCGGCGCACATAGCGTCGGGGTCTCCCACTGCTCGTCCTTCTCGGACCGC
CTCCCTCCCAACCCCTCTGACCCCTCGGCCATGGATGCCACGCTCGCCGCGTCTGTGCAGGTAAAATGCAACCGCACTGG
TGACCCCGTGGTGGTGCAGGACTTCAGGACCCCGGGGGACCTAGACAACCAGTATTACAAGAACGTGCTCGATAAAAAAG
TATTGTTCAAGTCGGACGCCGCACTCCGTTCGTCGGAGACTGGGGCACAAGTGCTCCTCAACGCCTGGATCCCTGGGCAG
TGGGAGCAAAAGTTCAAGGCGGCCATGGTGAGGATGGGCAGTATCGAAGTGAAGACCAGGGCCAACGGGGAGATCAGAAA
ACAGTGCCGGTTTGT-------GAACTAGCTAAGCGGTGGATCAAAATATCACAAGAATTGAC-----------------
------------------------------------GCATATCTTATCTTGATTCTCCACGCTGGAGACTCATGAGAATA
TGCTAATGGTTTATGTATGTGCCATTTTCGAGTTATCGTTGCTGTTTGATTTCAGATACGGTTATTTTTAGCAAAAAT--
----------------------------------------------------AACTATGACTATTTTTGCATTACATGTA
CCGACATTTTCCGTGCACTTGATTAATTAAAGAGATTA------------------------------------------
--------------------------------------------------------------------------------
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------------------TAATTACATTGTCTTTTG--------------------------------------------
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------------------------------------------------TTTTATCGGTCTCTCGTACTAAGTTTCAAGAG
TTGAAATTTAACATTAATTTTGAAAATTCGTCAAAATGTATTCAGGATCTTATTTGAAAGGCCTCGTCACGAGAAACATG
AATATGAAAACAGAATTAATTTTAGACTTATCGTTCAAAATATATAAATTTTTGAAAACCGGAAGCCAAAAATAAAT-CA
CGCGGGGAGACTAGGTGCCCTGAGACCTGCATGCCACAGATCCTCATCCGTCCAAGAAGAGCTTTGCTACACATACAGGA
TATTACAGGAATGAGGGGTTTACAGGGTGTTGCGGCGGTTTTTAATTGGTCATTAGTAGAAGCACGAGCCCACCCCCATT
GAAATCAGGGGGATGTGTTTAGAAAGTTTGGAAGGAGCCTTAGAAACATCTAAAAGCCTGTATGTCTAGTATTTTTGGTC
CAAGAACCATCACTTGTGAGAACACTAAAAGTAAATGCTCTCGACGCATGTTTGGTTGTCGGTGTGATCTACATTTCGGT
GGCCTGTGCCATACTCACTCCGTTCCTTTATATAAGGTGTATTTGTTTTTGATAAAACTTCATAATGTAAGGTGCATTTC
TTTTAATTCCTTATAATTTCCTTGTTAGTCCTTCAGAAAAAGGAAAGTATCTCTCTCCTGATTGTCTGTATCTCTCCTTG
TAACAAAATAAGGAAACTATCTCTATGTCGATTGCATGTATCTCTTACTTTGCCGGACTAACTGATTTACTTGCCACTGA
CTAACAAAT
>chr2D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGTGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTAAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATATATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCATGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCAAACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-GCGTATTATTTCTGTAA----TTTT
TT--AAAAAAATGTATTATTTAAAAAAAA-TTAGCC--------------------------------------------
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>chr1D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATTTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCATGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCAAACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATCTTTTTTTTT-GCGTATTATTTCTGTAA----TTTT
TTTT-AAAAAATGTATTATTTAAAAAAAAATTAGC---------------------------------------------
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---------
>chr3D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCATGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCAAACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC--TTTTTTT-GCGTATTATTTCTGTAA----TTTT
-----AAAAAATGTATTATTTAAAAAAAA-TTAGC---------------------------------------------
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>chr7D_1
TACATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCACGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGGCCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCACCACACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-GCGTATTATTTCTGTAA----TTTT
TTG-AAAAAAATGTATTATTTAAAAAAAA-TTAGCCACTTTATA------------------------------------
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>chr7D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTAAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCACGCACCAGTCGGCCCACAGCAGGCCAACTAA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGGCCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCACACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTTTGCGTATTATTTCTGTAAT-TTTTTT
-----TAAAAATGTATTATTTAAAAAAAAATTAGCCA-------------------------------------------
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>chr6D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACATGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCACGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCACACTGATGGGCCTCCAGTCGGCCTGTTGTGGGCCGACTGGGCT
CTGTCGGCCTGCGGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-GCGTATTATTTCTGTAAAATTTTTT
-----TAAAAATGTATTATTTAAAAAAAA-TTAGC---------------------------------------------
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>chr5D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTCAGAAAAGCATTTTTAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCAAGTATTCATAACATGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCACGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGGCCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCACACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGCAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-GCGTATTATTTCTGTAA----TTTT
TTTTAAAAAAATGTATTATTTAAAAAAAA-TTAGC---------------------------------------------
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>chr5D_1
TAGATGGATCATGATATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTCTGAAATTTTCAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAA-GGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCGTGTATTATTAAAAATAGGCATGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGACCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCAAACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-GCGTATTATTTCTGTAA----TTT-
--A-AAAAAAATGTATTATTTAAAAAAAA-TTAGC---------------------------------------------
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>chr5D_1
TAGATGGATCATGACATTTTAAGAAAATATTCGCGTGTTTCTAAAAAAAGTTTGTGAAATTTTTAGAAAAGCATTTTAAA
AAATGTTGTGTGGTTTAAAAAAATGGTATTTCCATTAAAAATGTATTTGAAGAAATGTTACCATGTATTCATAACGTGTT
AAAATATATACTTTTAAAAAATATTCGCG-GTAATATTAAAAATAGGCACGCACCAGTCGGCCCACAGCAGGCCAACTGA
GCCTAGTCGGCCCACTGCAGGCCTATCGGCCAACTGCAGGCCGACTGGGCCCTGTCGGCCAACTGGAGGCCGACTGGGCT
TGAATCTGCTGGCCGACAGCCCAATCGGCCAGCAGCACACTGATGGGCCTCCAGTCGGCCTGCTGTGGGCCGACTGGGCT
CTGTCGGCCTGCAGTAGGCCGATGGTGTATTATTTTTGAAAAATC-TTTTTTTT-ACGTATTATTTCTGTAA----TTTT
TTA-AAAACTATGTATTATTTAAAAAAAA-TTAGCC--------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_546
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----------------------------------------------------------------------------CCCA
GGAAACGACAATCCACTGGACACACAT-GGGTACAATTATCAGACAATGCCAACAGCAAACCGGTGTAGTAGTAGTACAC
AACCATGCATGCCAGCAGCTTCGTCCCAACTCCCAAGGAAACAAATGTCCATCCATCACCCCTTC--CATTGCGGCACAC
GGTACAGCATCAATGATCAA---AACCTATTGGCACGTA---ATCTAGTAGTACTCTTACTACTACTATGTATTCCACCC
GGCCGACACCGATAATTCTAAACGCACGGACCTTTACGGGCCTTTCACGGGCTCTTTCCTTAACTAATCTTCTCCCCCCT
GATTTTCAGTGAAGGTGGACCCCTCATCCTAATTTCTATCCAATCAAAATATCACAACTAGGACAGTCCGTGAATTCAGT
AAAAACCAATGTTTCAAATAGCGGGATATGAAAAATAGCGGCGGGCCTGTAAATCAGTTATAGCGGAGCTATAGCGGGCT
AAAGCGGACTATTTGTGAAGGCGATCATTTAGCGGCACCTTACTAAAAAGGCTATAGCGGGCTATAGCGGAGCTATAGCC
GGCTATTTAAAACTATGATAAAAACACAGCCCGTGAGTATAGCATTGCTCGGCCGACACCCACATCAACA----CAGGGA
ACTAGCACACGACAATGTCAACCAGTCCGAGCTGTACTGAGATTACCCTGCCCACGTCCCCGCTTGACTTTGCTCTCCGA
GATAGTGTAAAGAACTCATTATTCCATGCGAGCAAGTTTGTCGCTGTCGCTGTTCGAATTCAAACTGCATAACA----CA
GCATTGTGGGTTTATAAATAGACCTGAGCAACAGCAAGCTTCCTTCACCCATCGTCCTCCCATTTCTCGAGGAAACACAC
AAGTAACAGAGGGAGCACAGATACGTACGGCCATAGCGAAGATGGCTAAGCTTGCCGCATTGGCTATGGTAGCGTTGCTT
GGCTACGTGGCGCGGACGTGCCACGCTTCAGGGTATGGTGGGTATCCCAGCCCGGGCACGCCTAGCAGCTACCCT-----
-------------------------------------C------------------------------------------
------CTGCTGCGCTGGCGCTCGCGATCGGACACTACTACAAGACCTGCTACAAAGCCGAAGAGATCGTGAGGGATTCA
GTGAGGAAG-----------------------------------------------------------------------
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>chrUn_599
--------------------------------------------------------------------------------
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-------------------------------------------------CCAACAGCAAACCGGTGTAAC-ACACACCCA
---CATGCATGCCAGCAGCTTCGTCCCAACTCCCAAGGAAACAAATGTCT----ATCACACCTTC--CATTGCGGCACAC
GATACAGCATCAATTATCAAAGGAACCTATTGGCACGTACTAATCTAGTAGTGCTC------CTACTATGCATTCCACCC
GGCCGACACC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CACATCAACGCATGCAGGGA
ACTAGCACACACCGATGTCAACCAGTCTGAGCTG---TGAGGTTACCC--CCCACGTCTCCGCTTGACTTTGCTCTCCAA
GGTAGTGTAAAGAAGTCATTATTCCATGCGAGCAAGTTTGTC------GCTGTTCGAATTCGAACTGCATAACGCATGCA
GTATTGTGGACTTATAAATAGACCTGAGAAACAGCAAGCTCCCTTCACCCATCGTCCTCCCAAGTTT--------CACAC
AAGTAACAGAGGGAGCACAGATACGTTCGGCCATAGCGAAGATGGCTAAGCTTGCCGCATTGGCTATGGTAGCGCTGCTT
GGCTGCGTGGCGCGGACGTGCCACGCTTCAGGGTATGGTGGGTATCCCAGCCCAGGCACGCCTAGCAGCTACCCTCCACC
TCCACCCAGCACCACCCCGCCTAGCCCGAGCCCTCCTC------------------------------------------
------CTGCTGCGCCGGCGCTCGCGATCAGACACTACTATAAGACCTGCTACAAAGCCGAAGAGATCGTGAGAGATTCA
GTGAGGAAGGCGGTGTACGCCAACCGCGGCAT------------------------------------------------
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>chr2A_1238
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GTGAGGAAGGCGGTGTACGCCAACCGCGGCATCGGCGCCGGGCTCATCGGCCTCTTCTTCCACGACTGCTTCGTCAGGGT
ATGTAAACATGCAAAACTGTCGCTACGTACGCACTCTTATATACATA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TAACAATGTACTTCGTCAGGGTATGTAAACATGCAAAACTGTCGCTACGTACGCACTCTTATATACA
TATAAC-------TATGTGATTGTGATGTCACCGGACGTGACGAGCATAGTTCTTTTGTTGTGCAGGGGTGCGACGCATC
GGTCCTCCTCGACACGACGCCGGCCAACGCTCAGCCAGAGAAGCTCGGCATCCCCAACTTCCCGAGCCTGCGCGGCTTCG
AGGTGATCGACGCGGCAAAGGCGGCGCTCGAGGAGGCCTGCCCCGGAGTCGTCTCGTGTGCGGACATCGTCGCTTTCGCT
GGCTGCGACGCCACTTTCTTCCTCAGCAACGGGAAGGCGTACTTCGACATGCCAGCCGGCCGCTACGACGGGAACGTGTC
CCTCGCCAGCGAGACCCTCTCCAACCTGCCTCCGCCCTTCGCCACCCTCCAGATGCTCAAGGACATGTTCGCCTCCAAAG
GGCTCACCGTCGACGAGATGGTCACCCTCTCCGGCGCACACAGCGTCGGGATCTCCCACTGCTCGTCCTTCTCGGACCGC
CTCCCGCCCAACCCCTCGGACCCCTCGGCCATGGACGCCACGCTCGCTGCATCTGTGCAGGTAAAATGCAACCGCACTGG
TGACCCCGTGGTGGTGCAGGACTTGAGGACCCCTGGGGACCTAGACAACCAGTATTACAGGAACGTGCTCGATAAAAAAG
AATTGTTCAAGTCGGACGCCGCACTCCGTTCGTCGGAGACTGGGGCACAAGTGCTCCTCAACGCCTGGATCCCTGGGCGG
TGGGAGCAAAAGTTCAAGGCGGCCATGGTGAGGATGGGCAGTATCGAAGTCAAGACCAGGGCCAACGGGGAGATCAGAAA
GCAGTGCCGGTTTGTGAACTAGGAACTAGCTAAGTGGTGGATGAAAATATCACAAGAATTGACGCATATCTTATCTCGAT
TCTCCACGCTGGAGACTCATGAGAATATGCTAATGGGCATATCTTATCTTGATTCTCCACGCTGGAGACTCATGAGAATA
TGCTAATGGTTTCTGTATGTGCCATTTTCGAGTTATCGTTGCTGTTTAATTTCAGATACGGTTATTTTTAGCAAAAAT--
----------------------------------------------------AACTATGACTATTTTTGCATTACATGTA
CCGACATTTTCTGTGCACTTGATTAATTAAAGAGATTA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TAATTACATTGTCTTTTGTTTTATAGGCACTTACTTTACCCAATTTATTTTCGTTCATTCTT
GTTGTAACGTTTTTATTGGTATTATTGGTGTATTTTATTTATTTTTTGACAATCTTATTGGTATACTTTATTACACTACT
AAAATCAAGACTTTTACCTAAAGCCGTGATCTTTAC-----GTACAATGATCTCCTCAAGGGGGAAAAAAGCCATGCACG
GAACAATCCAAGGAAAGGTAAATTTTATGTGAAGAAAAGAAGGAAATGATCACAAGACCCGGAAATTTGCAGGAGCACGC
ACCTGCCAAGCCCTGTCGGGCTGCTCGATTGCCTCGCGATTCGCGGAGTAGTTGAACCCCGCACAAGGGCATAATACATT
TTTAGTTTCAGTCGTTGAAACTTACGATTTTGAATCAGAAACTTGTGATTCTCTTGCTTGTTCTTACCAAGTTTTGGAGA
TAAAATTTTAATATATTTTTTATTACAGTTGTAGGCATAAAATCATGATTTTATCGGTCTCTCTTACTAAGTTTCAAGAG
CTGAAATTTAACATTAATATTGAAAATTCATCAAAATGTATTCAGGATCTTATTTGAAAGGCCTCGTCATGAGAAACATG
AATATAAAAACAGAATTAATTTT-GACTTATCGTTGGAAAGATATAAATTTTTGAAAACTGGAAGCCAAAAATAAAT-CA
CACGGGGAGACTAGGTGCCGTGAGACCTGCATGCCACAGATCCTCATCCGCCCAAGAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>chrUn_1712
TGTGAGTC------------------------------------------------------------------------
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---------------------TGTGGTGTCACCGGACGTGACGAGCAGAGTTCTTTTATTATGCAGGGGTGCGACGCATC
GGTCCTCCTCGACCCGACGCCGGCCAACGCTCAGCCAGAGAAGCTCGGCATCCCCAACTTCCCGAGCCTGCGCGGCTTCG
AGGTGATCGACGCGGCAAAGGCGGCGCTCGAGGAGGCCTGCCCTGGAGTCGTCTCGTGCGCGGACATCGTCGCTTTCGCT
GGCCGTGATGCCACTTTCTTCCTCAGCAACGGGAAGGTGTACTTCGACATGCCGGCCGGCCGCTACGACGGGAACGTGTC
CCTCGCTAGCGAGACCCTCCCCAACCTGCCTCCGCCCTTCGCTACCCTCCAGATGCTCAAGGACATGTTCGCCTCCAAAG
GGCTCACCGTCGACGAGATGGTCACCCTCTCCGGCGCACATAGCGTCGGGGTCTCCCACTGCTCGTCCTTCTCGGACCGC
CTCCCGCCCAACCCCTCTGACCCCTCGGCCATGGATGCCACGCTCGCTGCGTCTGTGCAGGTAAAATGCAACCGCACTGG
TGACCCCGTGGTGGTGCAGGACTTGAGGACCCCTGGGGACCTAGACAACCAGTATTACAAGAACGTGCTCGATAAGAAAG
TATTGTTCAAGTCAGACGCCGCACTCCGTTCGTCGGAGACCGGGGCACAAGTGCTCCTCAACGCCTGGATCCCTGGGCGG
TGGGAGGCGAAGTTCAAGGCGGCCATGGTGAGGATGGGCAGTATCGAACTCAAGACCAGGGCCAACGGGGAGATCAGAAA
GCAGTGCCGGTTTGT-------GAACTAGCTAAGCGGTGGATCAAAGTATCACAAGAATTGAC-----------------
------------------------------------ACATATCTTATCTTGATTCTCCACGCTGGAGACTCATGAAAATA
TGCTGATGGTTTCTGTATGTGCCATTTTCGAATTATCGTTGCTGTATGATTTCAAATACGGTTATTTTTTCTTGGGCCGT
CCCATAGTGTAGAAAACCCTCTTATATTATGGGACGGAGGAAGTAGCGAAAAAACCATTACTTTTTTTGCATTACATGTA
CCGACATTTTC-GTGCACTTGAGTGGTTTTTCAGCTCCCAGCCGGGTGCTTAGGCACCCTCTTTGAACAGTTAATCAAAA
AATAGAAAAATAAATTAAAAAATCTGAAACTTTGCAGCATCAAAGATGATCAAACTTTGTAGATGCTTGCAAGTTTTCGT
GCCAAAAATCCATTCGAGGAGCTCTAAACATGAAAAAGATTCCAGTGCTTGAAGTTTTGAGCACTTTTAGCACTGAAATC
TGAAACTCGTCACCTTTCTCCACATGATATTTTGGCATGAAAACTTGCAAGAAGCTACAGAGTTTGACCATCTTTGATGT
TGCAAAGTTTCAGATTTTTTTTAAATTTGTTTTCAATTTGTTTGAATTTACTGTTCATAGAGGGTGCCTATGCACCCGGG
AGCTGTTACACCTTTCTGTAATTACATTGTCTTTTGTTTCATAGGCACTCACTTTACCCAATTTATTTTGGTT-------
---------TTTCTATTGGTATTATTGGTGTGCTTTATTTTT------------TTATTGGTGTACTTTATTACACTACT
AAAATCAACGATTTTACCTAAAGCCGAGTTCTTTACCTAGAGTACAATGATCTCCTCAGGTTGGGCTTGTTTCAAGAGTT
GCTGTTTGATTTCAGATACGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--TAATTTTTGTTGTTTGAATTTCAGATACGGTTATTTTTTACAA------TCTCGCTCGTCTTTACCAAGTTACAGAGA
TAC------AATATATATATTGTTACGGTTGTAGGCATATAATCATGATTTTATCGGTCTCTCGTACTAAGTTTCATGAG
TTGAGACTTAACATTAATTTTGGAAATTCGTCAAAATGTATTCATGATCTTATTTGAAAGGCCTCGTCATGAGAAACGTG
AATATGAAAGCAGAATTAATTTT-GACTGTTCGTTCAAAAGACATAAAAGTTTCAAAACCGGAAGCCAAAAATAAAAACA
CGCGGGGAGACTCGGTGCCCTGAGACCTTCGTGCCGCAAATCCTCTTCCGC-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CAAGAACCATCACTTGTGAGAACACTACAAGTAAATGTTCTTGACGCTTGTTTGGTTGTCGGCGTGCTCTACATTTCGGT
GGCATGCGCCATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>SNPs
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
--------S------------------S---------------------------------S-------SS---------
----------------------S-----S-------------------S-------------SSSSS-------------
---SS------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S---S--------------------------
-S-----------------------------------------------S----------------S-----------S-
----------------------------------------------------------------S-------S-------
--------S--------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS----------------------------------------S-----------S---S-----------------
-----S-----------S------------------------------S----S--------------------------
----------------S------------------------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------------S-S--SS-SSS---S--S-SSS------------------------------SSS
S-S-SSSSSSSSS-------------------S----------------------------S---------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------S--------------------------------------
-----------------------------------------------------S--------------------------
---------S----------------------------------------------------------------------
-----S-----------------------------------------S--------------------------------
------------------------S--------S----------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------S-----------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------S----------------S---------------------------------------
--------------------------------------------------S-------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---------------------------S---------S---S-----S--------------S---S-------------
---S--S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS
>forward_1425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CACCCATCGTCCTCCCATTG---------------
--------------------------------------------------------------------------------
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---------
>reverse_3041
--------------------------------------------------------------------------------
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ACAGTGCCGGTTTGTGAACT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_2515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTCTTCCTCAGCAACGGGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>reverse_4574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AGGGGTTTACAGGGTGTTGC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
