>input_sequence_49381
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-------------------------------------------ATGGCCGCCGACGCCAACCACAGGAAGGGTTAGATCC
CTTCCCCACTCGCCTCTTCCTCCTCTTCCGTCCGATCTCCGCTCACTCCTCTCGTGGCTCCCGATCCGCAGTCGTGGTGA
ACTTCCAGTCGGTCGCCAACGCGCCGAAGCTGCGGCAGTCCAAGTTCAAGGTGCGGGCACTTTTTTCTCGCCGTTGCTTG
CCTCACGCGACCAGCAAGCTCAGAAATACGCCTCAGGTT------ACTATCCCGTGAGAGATCTCGCATTCACGCAGGTT
GCTGGGCTGTCTTGCTTGGGCGATTTGAGCGGTAATTTTTGTCGGGGCCGATCAAATCGGCAGTTAGCTGCAACCACAGA
ACATTGATTATTTTGGGGGAAGAACG-----------------------------CAGCAGCGCCGTAGCCTAGAAGTAA
TGCCGTACTGGTCTGTTCTTTGCCCGGGGGCGGGGCCATCGTAGCAACGTGTCTTTGGTTGTAGCCAGCAGGAGAAAAAG
ATCGCTGTGATGGGGAAGG-CATGCTTGGCTTTGCCTCGTCAAGTCTCTGGTTGATGAAGATGTCATCGCGCCAACAAGA
AAATTGTGTATGCCAAAGACATCGGTATCTTGACCCTTACTATTGCTAATATGCTG-----TACATGTCCATGTCAGTTG
TACTCGCCGAGAACCTTTCCTCACTCCCCACTTGGATGCATCGATAGCTCTCAGTACTTGCAAC--------TTTCTGGA
CATACACTATTACAAAATTTACAAATATATGCACTAGGGATGATGTTTTCTTCTAGAAGGAAGTCATTTTTCTGAAAACA
AAAACTTGATGTAATTCGACAATGTCGCCTGAAGACCTATCCTAACAGATTATTTTTGTGGATTTTTGTAGCTTTTCACA
------TTTGAGCTTGCCTCCCCTTGTGTGAAACTTATGTTTGTGCCCTGTAGCCTGTGGAGGGTAGCAGTATTAAATTT
TAGAATCCACCATAGCTCTAGATA------------------------------CATCAGTATCTGTTAGTTTTACAGAT
ACTAGCCTTTGTGTTCAAGTTATGGATGGCCCTGGTTTCACGAGTAAATAGTATGCCCTGAAGTCCATCATCTAATG-GA
ATTATATGCATATTTCTTATTTCAGTAAGGAAATGAATCAATATATGCTAGTAATAATGAAGTAGTACTTTGTTATGGCT
CATGCAATTTGAACATCAAATTAGACAGACTGTGCTTCCAGTCAGTGCCTTCGTGGTTGGTAATCTTTCTTTTCTAACCT
CCTTGTACTCTTTCAGATTGGTGGAAACGAGAAATTTGCGAGGGTGATTGAATTTCTTCGCTGCCAAATTCACCAGGACA
CAGTGGTAAGAACGCGGTTTATAATTCATCTGGAGTGGATCATAGTGTCAACATACATGGAAATAATATCGATAGCCTCT
CTATGTTTTGCCAACAGTTTCTCTACGTGAATAGTGCATTTTCCCCGAATCCAGACGAGTTGATATCTGATTTATACAAT
GTAAGATCCAATACTCTCACTACTTTTATATGCCCTCTTCAGTCTTAA--------------------------------
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>chr7B_1_TraesCS7B01G070300
TGGAAGGACGCAATGGATTCCCGATGGATGGAGTCCTCCCGGGCGCGCGGAGTGCAAGCTGGACGACCATCCCTCGCACG
GGCCGCGTGAGATGAGCTCGGAGTCGACGGATCTGGAGGTCAAGGATTCGGATCCGCTGCCCGCCATGCCAGAGACGAAC
TTGGATGACGAAGGGGAGTGGAGAGGTGGGAAGTGAAGTGGCTAGGGTTTGGTCCGGCGAGCGGATGGGGAGGATTTTAT
GTGGGGTCGGGTGGGCCAGCGTGGGACGGCTCCGACGTGGCGGGCATGCCCAAGCGCGCCCGTGCGCCCCCATATCCGCC
CCGTATTTGGGCTGAATATGGGGAGTGCCGGTCAGCCCGGGTGTTTGAGGGCCGTTTGAGGGGCCTGTCTGGATCAAAAA
ATCGTGACCGGACGGCCCGCCCAGACGTATGAGGCGGATTTGAGGCGCCCGGCTATAGATGCTCTTACGTGGCATTTTTT
TAAACATTTTTTTCATTCAGATTTGCATCCACTACCTCCGTTTCTAAATATAAGTCTTTTTAATATAAACTACATATGAA
TGTATATAGAGATATTTTAGAGTGTAGGTTCATTCATTTTGCTCCTATATAGTCCCTTATTTGAATATGTAAAATGACTT
ATATTAGGATGGAGGGAGTACTTTTCTTTCGGGAGAGCATCTACGATTTTATATCTATACATAAATTTTCAATTCTAGAT
AACAGATGCATTTATCCTCTTATGCAGGACCGAACACGCTCAAACTCTTCTTGGGCCTGGTTGAGCCTCATGCGGACAAC
CTAACTGGCTCTCCATACTGTTTGCCGCCGCGGGCGGCAAATAGGATCAGCCAAACCGGCGCTCTCGCACGAAAACCCAT
CCCCAATCCAAATCCAAAACCCGTCTGCAAGGGTCGCATCCTACAGAGCCCTTCTCACGAGGGCCTTCCCGCAAATTTCG
TCCTCCTTCTTCACTCCCTCGT---CTCCGTTCCCCTTCGGCGATGGCCGCCGACGCCAACCACAGGAAGGGTTAGATCC
CTTCCCCACTCGCCTCTTCCTCCTCTTCCGTCCGATCTCCGCTCACTCCTCTCGTGGCTCCCGATCCGCAGTCGTGGTGA
ACTTCCAGTCGGTCGCCAACGCGCCGAAGCTGCGGCAGTCCAAGTTCAAGGTGCGGGCACTTTTTTCTCGCCGTTGCTTG
CCTCACGCGACCAGCAAGCTCAGAAATACGCCTCAGGTT------ACTATCCCGTGAGAGATCTCGCATTCACGCAGGTT
GCTGGGCTGTCTTGCTTGGGCGATTTGAGCGGTAATTTTTGTCGGGGCCGATCAAATCGGCAGTTAGCTGCAACCACAGA
ACATTGATTATTTTGGGGGAAGAACG-----------------------------CAGCAGCGCCGTAGCCTAGAAGTAA
TGCCGTACTGGTCTGTTCTTTGCCCGGGGGCGGGGCCATCGTAGCAACGTGTCTTTGGTTGTAGCCAGCAGGAGAAAAAG
ATCGCTGTGATGGGGAAGG-CATGCTTGGCTTTGCCTCGTCAAGTCTCTGGTTGATGAAGATGTCATCGCGCCAACAAGA
AAATTGTGTATGCCAAAGACATCGGTATCTTGACCCTTACTATTGCTAATATGCTG-----TACATGTCCATGTCAGTTG
TACTCGCCGAGAACCTTTCCTCACTCCCCACTTGGATGCATCGATAGCTCTCAGTACTTGCAAC--------TTTCTGGA
CATACACTATTACAAAATTTACAAATATATGCACTAGGGATGATGTTTTCTTCTAGAAGGAAGTCATTTTTCTGAAAACA
AAAACTTGATGTAATTCGACAATGTCGCCTGAAGACCTATCCTAACAGATTATTTTTGTGGATTTTTGTAGCTTTTCACA
------TTTGAGCTTGCCTCCCCTTGTGTGAAACTTATGTTTGTGCCCTGTAGCCTGTGGAGGGTAGCAGTATTAAATTT
TAGAATCCACCATAGCTCTAGATA------------------------------CATCAGTATCTGTTAGTTTTACAGAT
ACTAGCCTTTGTGTTCAAGTTATGGATGGCCCTGGTTTCACGAGTAAATAGTATGCCCTGAAGTCCATCATCTAATG-GA
ATTATATGCATATTTCTTATTTCAGTAAGGAAATGAATCAATATATGCTAGTAATAATGAAGTAGTACTTTGTTATGGCT
CATGCAATTTGAACATCAAATTAGACAGACTGTGCTTCCAGTCAGTGCCTTCGTGGTTGGTAATCTTTCTTTTCTAACCT
CCTTGTACTCTTTCAGATTGGTGGAAACGAGAAATTTGCGAGGGTGATTGAATTTCTTCGCTGCCAAATTCACCAGGACA
CAGTGGTAAGAACGCGGTTTATAATTCATCTGGAGTGGATCATAGTGTCAACATACATGGAAATAATATCGATAGCCTCT
CTATGTTTTGCCAACAGTTTCTCTACGTGAATAGTGCATTTTCCCCGAATCCAGACGAGTTGATATCTGATTTATACAAT
GTAAGATCCAATACTCTCACTACTTTTATATGCCCTCTTCAGTCTTAAATGCCTGAAATGCAT-TGTCAAACAAGTAGCC
TTCAGCTATTCTGATTGTTTATAGGCTTTG-AGAGAAGTACAAAAACATTATGCTGGTAAAATTTGCATTCCATTCTTTT
TGCTAGTCGATTAGACAATCTAAGCACTAGCACGGATCATTCAGCCACCTAATCTTATTGTAGCAGCAATTGAAATTCGA
TATATGCCACAGGGCTCACTACTCGGATTAACACTTTCCAAACTAAATAGCTGGGCATCGACAGCGACAATCAGCGGATG
AAGGAGTGGATGAAAAGGGTACCTGAGTGCTTGCATGCCTGGATCAGCCCAATCCCTATTAGTGAGTGATCAAGCAAGGT
CAAAAAGAAGAGCAAGCCCACGGCTAGGCATAGTATCAAGAGATTGCTCGCCCGTCGCATGCCTAACGAATCCAGAGAAA
CAAGAAAAGCATGACCAATTGAAGGGGTCGACTGCCCAAGGAGAGTAAAATAATGACTAATGGTGGTTAAACATGTTGCA
C----------GGCAGAACTTTGGGATCGACGGGCAGCTGGTGGTCAATTACGCATCATCCATGGCATGGGGGTAAAAGG
TGAACTTGCTTGAAATCAGCTTGAGCAAACACAGGAAACCCTTTTATTTCCAAAATTAACTTTTCACGGCACTGCTAATG
GATGTAAAGCACTGCAAATTGAGTTTCAAAAGGAAGCTCTTTCGTTCACATGATATTCAGCATGATGGCAAAAGCAAGAT
CGTTTTCCACATTCTTTCCATCTGCATTAAAAACCCAAGACGTCTTTTCTTCCTGGTAGCGACAATGCTCTGCTGTTCTA
CGGCCACCATTGCTGGAAACAAATTAAATTGTTTTGTCTTTAGCGAGATGCTTACTTCAATTTTCTTCTCTTCCCTGGAA
TCTACCATCTTT---CTTCATCTTTGATCGTGCCACTAAGACAGTCACCAGTTGTTGAGCACGTCAAACCGAGCTTCAAG
CGAAAGCTCTTTCGTGCACCTTG
>chr7D_871
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----------------------------------------------------------------------GAAAACCCAT
--CCAATCCAAATCCAAAACCCGTCTGCAAGGGTCGCATCCCACAGAGTCCTTCTCACGAGGGCCTCGCCGCAAATTTC-
--CTCCTTCCTCCCTCCCTCGTCGTCTCCGTTCCCCTTCGGCGATGGCCGCCGACACCAACCACAAGAAGGGTTCGATGC
CTTTCCCACTCCCCTCTTCCTCCCCTTCCGTCCGTTCTCCGCTCAACCCTCTCGTGGCTCCCGATCCGCAGTCGTGGTGA
ACTTCCAGTCGGTCGCCAACGCGCCGAAGCTGCGGCAGTCCAAGTTCAAGGTGCGCGCACTTTT-TCTCGCTGTTGCTTG
CCTTACGCGACCAGCAAGCTCAGAAATCTACTCGTACCTCGGGTCACCATCCCGTGAGAGATCTCGCATTGACGCAGGTT
GCTGCCCTGTCTGGCTCGGGCGATTCGAGCGGTAATTTTGGCCCGGGCCGACCAAATCGGCAGTTAGCGGCAGCCACAGA
ACATCGATTATTTTTGGGTAAGAGCGGAATTAGTGCTATTTTGGGGGGGAGAAAGCAGCAGCGCCGTAGCCTAGAAGTAG
TGCCGTACTGGTCTGTTGCTTGCC------CGGGGCCATCGCAGCAACGTGTCTTTGGCTGTAGCCAGCAGGAGAAAAAG
ATTGCTGTGATGGGGAAGGGCATGCTTGGCTTTGCCTCATCAAGTCTCCTGTTGATGTA------ATCGTGCCAAAAAGA
AAGATGTGTATGCCAAAGACATCAGGATCTCGACCCTTACTACTGTCTAACTAGTATATGCTACATGTCCATGTCAGTAG
TACTCACCCAGAACATGTCCTCACTCCCCACTTGGATAGAATCATTAGAATGCGTCTTTGATAGTTGCAACTTTTCTGTA
CATACACTTTCAATAAATTTATGAGAATGTGCAGTAGAGGTGATGTTTCTCTTCGAGAAGTAGTTG-TTTTCCGAAAACA
GTAACTTGGTGTAATTCGACAATGTCGCCTTAAGAC--ATCCTGTCAGATTATTTTGGCGGGTGTTTGTAATTGCTTACT
TTTGATTTTGAGCTTGTCAGATTG-GTGTGAAACTTACGTTTATTCACTGTAGGCTGTAGAGGGTTACAGTATTAAGTTT
TAGAATCCGTCATAGCTTTAGATGCATCAGTATTTGTTAGTTTTTTTTTTTGACCATAAGTATTTGTTAGTTTTACGGAT
ACAACCATTTGTGCTCAAGTTATGGAAGGCCCTGGTTTCATGAGTAGATTGTCT-CCGTAAAGTCTGTCATCTAGTGAGA
ATTATATGCTACTCT-TTATTTCAACAAGTGAATGAATTAATATATGTCACTAATGA------AGTACTTTGTTCTGGTT
CATGCAATTTGAACAT------AGACAGACTGTG-TTCCAGTCAGTGCCTTGGTGGTTGGTAATCTTTTTTAACCCCCTG
GTTT----TCTTTCAGATTGGTGGAAATGAGAAATTTGCGAGGGTGGTTGAATTTCTTCGCCGCCAAATTCACCAGGACA
CAGTGGTAAGAACGCGATATGTAATTCATATGGAGTGGATCA--------ACATACGTGGAAAT-ATATCAATAACCTCT
CTCTGTTTTTCCCACAGTTTCTCTATGTGAATAGTGCATTTTCGCCGAATCCAGATGAGTTGATATCTGATTTATACAAT
GTAAGATTCAATACTCTCGTTACTTTTTTTGGCCCTCTTCAGTCTTACATGCCCTGAAATGTACTGTCAAATAAATAGCC
TTCAGCTATTCTGATTGTTTATCAGCTTTGAAGAGAAGTACAAAAACATTATGCTTGTAAAGTTTACACTTCATTTTTTT
TGCTAGTCTAGCAGACAATCTATGAAGTAGCACGGATCGTTCAGTCACCTAATCTTATTGTAGCAGCAATTGGAATTCGA
TATG----------------------------------------------------------------------------
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-----------------------------------------------------TGATTAATGGTGGTTAAACATTTTGCT
TCCTTTTACATGGCAGAACTTTGGAATCGATGGGCAGCTGGTGGTCAATTACGCATCATCCATGGCATGGGGGTAAAAGG
TGAACTTGCTGAAAATCTGCTTGAGCAAGCATAGGAAACCCTTTCGTTTCCAAAATTAACTTTTCACGGCACTGTTAATG
GATGTAAAGCACTCCAAATTGAGTTTCAAAAGGAAGCTCTTTCGTTCACGTGATATTCAGCATAATGGCAAAAGCAAGAT
CGTTTTCCACATTCTTTCCATCTGCAATTAAAACCCAAGACGTCTTTTCTTCCTGGTAGAGACAATGCTCTGCTCTTCTA
CGGCTGCCATTGCTGGAAACGAATTAAATTGTTTTGTCTGTAGCGAGATGCTTACTTGAATTTTCTTCTCTTCCCTGGAA
TCTACCATCTTTATTCTTCATCTTTGATCGTGCCACTAAGACAGTCACCGGTTGTTGAGCACGTCAAGCCGAGCCTCAAG
CGAAAGCTTTTTCGTGCACCTTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
SS---------------------------------------S------S-----------------SS-----------S
SS-------S--S------------------------------------------S---------S--------S---S-
---S-------S-----------S----------S----------SS---------------------------------
-------------------------------------------------------S--------S------S--------
---S-----------------------SSS-SSSSSSS---------S----------------------S---------
----SS------S---S--------S-------------S-S-S-------S----------------S---S-------
----S---------S---S----S-------------------------------------------------------S
-----------------SS-----SSSSSS-----------S----------------S---------------------
--S-----------------------------------S---------SS-------S-SSSSSS----S-----S----
--SS-------------------S-S----S-----------S--SSS-SS-SS-S----------------------S-
-----S--S-----S-S--------------------SS-SSS--SSSSS-SS--SS---SS-S--------------S-
--------S-S-SS-------SS-SS--S----S---S-S--------SSS-SSSSS-S-S---SSS-----S-------
SS------S---------------------S-----SS-----SS-----------S-S--S-S------SS-SS-S--S
----------------S-SSSSSSS------------S----S-S-S------S----S------SS---------S---
--------SS-------S-----S---------------------------------S-----S------------S---
--S-S-S------S------------S-------------S-----S--S--S-S--S-S-----SS-------S-----
---------SSS-S-S--------SS---SS-------S--------SS-S----S-SSSSSS-----------S---S-
----------------SSSSSS------------S----------------S----------------S--SS-SSS-SS
SS--SSSS-------------------S------------------S--------------S------------------
----------------S-S-S--------S------------SSSSSSSS------S-------S-----S---S-----
--S------S--S------------S-----------------S-----------S------------------------
-------S----------SS-------S-SS----------------S-----SSS--SSSSS--------S--S-----
----------------------SS-------------------------------S-----S---S--S-S----S----
--------S-SS----------S-S-S-----------S-----S---------------------------S-------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------S----S
S-----------------------S-----S-------------------------------------------------
----------SS-----S----------S--S------------SS----------------------------S-----
-------------S-----------------------------------S-------------S----------------
--------------------------S-S------------------------------S--------------S-----
----SS--------------S------------------S-----------------S----------------------
-------------------------------------------------S-----------------S------S-----
--------S--------------
>forward_254
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--------------------------------------------------------------------------TTTTAT
GTGGGGTCGGGTGG------------------------------------------------------------------
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>reverse_2275
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----------------------------------CTTCCAGTCAGTGCCTTCGT--------------------------
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>forward_1596
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--------------------------------------------------------GAAGATGTCATCGCGCCAAC----
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>reverse_2809
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--------ACAGGGCTCACTACTCGGAT----------------------------------------------------
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