>input_sequence_49374
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--------------CGCGTTTGCTACCACTCGGCCTCTCTCTTCCGCCGGCCGCCGCCAAAACCAATCCCCAAACAACGA
TGCTCCGCCGCATCGCCGCCCTACGGCCGCCGCCGCCGCGCGCGGTGGCGGCGGCGCTCGTCGGAGGGGCCGACGCAGGC
TACTCCTCCAAGTCCACCTCCCTCCCCCAGAAGCAGCAGCGCGTCCGCGACCACGCCTTCGACGGCATCATGGAGGTGCA
GAAGCGCGTCCGCCGCTTCCTCGCGCTCCACGCGCTGCTCCTCTACGCCGCCACCCCCACCGCGCCCTCGGGCAAATTCT
CCGCCGGGGGCAGCGGCGCGGTCTCTGTGCCCTTCTCCCGCCTCGGCGCCCTCTCGCGCCGCCAGCTCCGCCTCGCGCCC
CTCGACGCTGGCAACTTCATGCTGCGCCACCCGCACGCCTTCCACCTCTTCCTCCACCCGGTCCACCGCATCCTCCACGT
GCGCCTCACCCCGCGCGCCTCCGCCGCGCTGCGCCTCGAGGCCGACGCCATCGCCTCCCTGCGCCCCGGCGCCGTCCTCC
GCCTCCGCAAGCTGCTCCTCCTCGCGCCCCCGCACCACCGCCTCCGGCTGGAGCACATCCGTCTCCTCCGCCGCGACTTC
GGCCTCCCCGACGACTTCGCCGACTCCGTCATCCTGTCCAATCCCGCTCTGTTCCGCCTCACGCCTGACGGGTTCGTCGA
GTTTGTGCCCTCCCCTGACGACCCACCCGACCTCACCGTCGCCGCCGTCGAGCGCTCCCGGGAGCGCCACTACCGCGAGC
ACC---GTGCTCCCGGCGCTGGCGAGGAGGACGCGCGCTTCGCGTTCCCCACCCGCTTTCCGCCGGGCTTTAAGATTGGC
AAGTATTTCCGCATTGCAGTTTGGAAGTGGCAGCGCCTCCCCTACGCTTCCCCGTATGCGGACGTCTCTGGCCACGACCT
GCGCTCACTTGAGGCACAACGCCGCATGGAGAAGCGCGCTGTCGCTGCTGTCCATGAGCTGCTCTCTCTCACCGTCGACA
AGCGTACCACGCTCGAGCGTCTCGCGCTCTTCCGTGACGCCCTTGGTGTGCCGAAGAAGATTAAAGAGTTCTTGCTTAAG
TATCAGGGGATATTTTACATATCAACAAGAGGAAACCAGGGGAAGCTGCACACTGTGTTCCTCAGGGAGGCATACTATAA
AGGGGAGCTTTTAGATTCCAATGAGATACATGACGCAAGGCGGAAGCTGGAGGAGCTGCTCTTGATGAGCCGAGAGAAGG
CGAATTTGGATCGGATGTTCACCAGCATGGGCCGTGGATGGGATGAGCTTGGTGGTGGTCGTCGTGGAGGAGCAGAATTG
AGGGAGAAGTTTCTTGGGGATGCAGGTGGCAGAAAGAGGAAAGTTGGCGCTGACGATGAGGACGATGGTGCCGATAGTGG
GGAGGACTCGGGAGTTGAATCACTCTACATCGACTGAGGAACAGAATCATACAACGGCACTGAATGTCATATAGTGTAGC
CTGAGTTCTGAATCTG----------------------------------------------------------------
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-----------------
>chr5A_1_TraesCS5A01G314300
ACACTCTCACGCTCAGTCTGGCAGCGTCCATCGCTCCTGAGTAAGAATCTAATATACACAAACAAGCAGCAGTAGGGTTT
TACGCATCCGTGCGGCCCAAAGCTGGGTAAAATCGCCCGTGTGCACTGCCTCGATCCGCTCTTTGTGCGCTCTCCGCCCC
CCACCGAACCGAAAGGGGCCCTGTCCGCATAGGTGTTGGCGGAATCAGCATCGCCGCCCGACAATCGTATCCCTAACATA
CCCCACAAGAAAATGCACTGTTGGAGTTAGAACAGAATAAGGTACAGAGAATTAAATTATATTTTCATACATTGCATCGG
TCCAAAAATTTAGTGAACCATTTTTAGACATCGGACGACATGGCCCCTTCCAAGGAAAAAGAGGAGGTCTGCAACTGGGG
AAACTGATGACCTAACCGCAGATTCCAAATCAAAGAAAGCGTTACCACAATTTAATTACAACCAGTAATGGAATACCTGA
ATGTTTACAATACTGACAAGATGTTACTGAATAATATGCACATCTGTTGTAAAAGAGTTGTTCCCTCTAAAAAGTGATAA
ATAAAAAAGAGGCCTAACGTCGATAAGGAGT-----ACAGCGCATTTCAAGTCTATCATACCCCACTGATTGAAAATGCC
GCTGCCTGCTTTGTAAACATGTATCGTCCCCTTCTGAACTGAGTACATTGTTCTTTTGTGCTATCTCAAACCGAGGTGCT
TTTGGCTG------------------------------------------------------------------------
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---------------------------------------------------------TAATAAGATCTCTCTGCTCACTC
GACAGCTTGGTGAATCCAATGTTTACCCATTATTTCTTTGTGTTCAGCTAGATCACCATAATATGGTCGCGAGTATCCAC
GACATGTGAGAAAAGTTGCCAATAAATTTTAAGTATGAAAACAAAAGCTGCCAGAGTTGCAAATGATAGTTCAACTGGTT
AGAATGCACTGGCCAGCGGAAAGAAAAAAGGAAAACATGAAAACTGCGTCGCGATTCGTGTCTCGTGCGCATCCGACGGC
TTGCCTCTTTCACCCGCGTTTGCTACCACTCGGCCTCTCTCTTCCGCCGGCCGCCGCCAAAACCAATCCCCAAACAACGA
TGCTCCGCCGCATCGCCGCCCTACGGCCGCCGCCGCCGCGCGCGGTGGCGGCGGCGCTCGTCGGAGGGGCCGACGCAGGC
TACTCCTCCAAGTCCACCTCCCTCCCCCAGAAGCAGCAGCGCGTCCGCGACCACGCCTTCGACGGCATCATGGAGGTGCA
GAAGCGCGTCCGCCGCTTCCTCGCGCTCCACGCGCTGCTCCTCTACGCCGCCACCCCCACCGCGCCCTCGGGCAAATTCT
CCGCCGGGGGCAGCGGCGCGGTCTCTGTGCCCTTCTCCCGCCTCGGCGCCCTCTCGCGCCGCCAGCTCCGCCTCGCGCCC
CTCGACGCTGGCAACTTCATGCTGCGCCACCCGCACGCCTTCCACCTCTTCCTCCACCCGGTCCACCGCATCCTCCACGT
GCGCCTCACCCCGCGCGCCTCCGCCGCGCTGCGCCTCGAGGCCGACGCCATCGCCTCCCTGCGCCCCGGCGCCGTCCTCC
GCCTCCGCAAGCTGCTCCTCCTCGCGCCCCCGCACCACCGCCTCCGGCTGGAGCACATCCGTCTCCTCCGCCGCGACTTC
GGCCTCCCCGACGACTTCGCCGACTCCGTCATCCTGTCCAATCCCGCTCTGTTCCGCCTCACGCCTGACGGGTTCGTCGA
GTTTGTGCCCTCCCCTGACGACCCACCCGACCTCACCGTCGCCGCCGTCGAGCGCTCCCGGGAGCGCCACTACCGCGAGC
ACC---GTGCTCCCGGCGCTGGCGAGGAGGACGCGCGCTTCGCGTTCCCCACCCGCTTTCCGCCGGGCTTTAAGATTGGC
AAGTATTTCCGCATTGCAGTTTGGAAGTGGCAGCGCCTCCCCTACGCTTCCCCGTATGCGGACGTCTCTGGCCACGACCT
GCGCTCACTTGAGGCACAACGCCGCATGGAGAAGCGCGCTGTCGCTGCTGTCCATGAGCTGCTCTCTCTCACCGTCGACA
AGCGTACCACGCTCGAGCGTCTCGCGCTCTTCCGTGACGCCCTTGGTGTGCCGAAGAAGATTAAAGAGTTCTTGCTTAAG
TATCAGGGGATATTTTACATATCAACAAGAGGAAACCAGGGGAAGCTGCACACTGTGTTCCTCAGGGAGGCATACTATAA
AGGGGAGCTTTTAGATTCCAATGAGATACATGACGCAAGGCGGAAGCTGGAGGAGCTGCTCTTGATGAGCCGAGAGAAGG
CGAATTTGGATCGGATGTTCACCAGCATGGGCCGTGGATGGGATGAGCTTGGTGGTGGTCGTCGTGGAGGAGCAGAATTG
AGGGAGAAGTTTCTTGGGGATGCAGGTGGCAGAAAGAGGAAAGTTGGCGCTGACGATGAGGACGATGGTGCCGATAGTGG
GGAGGACTCGGGAGTTGAATCACTCTACATCGACTGAGGAACAGAATCATACAACGGCACTGAATGTCATATAGTGTAGC
CTGAGTTCTGAATCTGGCATGGGAACCATATTGGAAGATTGATTTATCATGCTAGCATCTACACCATGGTGTAGTGATCT
TGATTGATAAGAGAGTGTTGTAGTCTGAGGTGAAATTTTGAGTGAGAGGTCTCGTCCTAAACTTGCGGACACTATGGATT
GGGGAAGTTATCACCCTCAATGCTGCCATGCATCTGCACTAGGATGGTTGATGGAATTTTCATTTGCTCAGCATTATGTG
AAGGGACAAAGACACAAGCAAGAGAACTCCTTTCTGCCCCCAAGCTAATTTGATCAGTGTCTTTTGACTTGTGAGTAACT
CTGGATCTATTTCACTCATTGCTCCCATGGAAAACTGTTTGTGTTATGGATGGAATATCACCATAGCAACATTCTGTCAG
TCAGTTCTATGTTTTGCAACATATTGTAACCAAACAATTGATACTGTAATCGGTTAGATGATCTGCAAATAAAATCAGAA
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----------------------------------ATGCTGACGGGGCGTCAGAAAA-ATCCCAGTGCTTTGGTG-TGTTT
TTGTGTTTTTTGGTCAGTGCTTGAACACATGTTTTTGCAGCAGGGGAGTTGAGAGCTATGCATTCAGCCACTT-TTTTCC
CATTTTCAGTTGAGACGATAAGCAACTTCGTTGTAGGTTCTCTTTTTAGTTTTTTTTAATGTAATTCAGTGGTGATG--G
TTCAATAGTATA--GTTCGGAGAAAATTATATCGTCTTAAATATCAATTTTGACGAAGCAGGCGAAGAAGGCCGCAAAGC
GAGCTGTTGGTGAAGCAAGGGGTCGGGCATATGAGGACCTCTACCAACGGTTAGGCACGAAGGAAGGTGAAAGGGACATC
TATAAGATGGCCAAGATCCGAGAGAGGAAGACGAGGGATATTGGCCAAGTCAAATGCATCAAGGACGGAGCAGGCCAACT
CTTGGTGAAGGACGAGGAGATTAAGCATAGATGGCGGGAGTACTTTGACAAGCTGTTCAATGGGGAGAATGAGAATTCTA
CCATTGAACTGGACGAC
>chr5B_251
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----------AAATGCACTGTTGGAGTTAGAACAGAATAAGGCACAGAGAATTAAATTATATTCTCATACATTGCATCGG
TCC-AAAATTTAGTGAACTATTTTTAGACATCGGACGACATGGCCCCTTCCAAGGAAAAAGAGGAGGTCTGCAACTG---
------ATGACCTAACCGCGGATTCCAAATCAAAAAAAGGGTTAGCACAATCTAATTACAACCAGTAATGGACTACCCAA
ATGTTTACAATACTGACAAGATGTTACTGAATAATATGCACATCTGTTCTAAAAGAGTTGTTCCCTCCAAAAAGTGACAG
ATAAAAAAGAGGCCTCACGTCCATAACCATAAGGAGACAGCGCATTTCAAGTCTATCATACCCCACTGATTGAAAATGTC
GCTGCCTGCTTTGTAAACACGTACCGTCCT-TTTTGAACCGAGTACATTGTTCTTTTGTGCTATCTAGAACCGATGTGCT
TTTGGCTGTAAGAGCAACTCTAGCAGACCCCGCATCCAGCCGACCCGCAAAACGCGTTTGCAGTTCGGGGGAAACCGCTT
TTGCGGGCTGACTCGGACGGCCGCAGATGCAGACTCCCCAAACGGGCCCGTATAAAAGTATATTCGCCGAATATGCTTTT
ATACGGGTCGACTTTTGCGGTGTCTGTTCGGACACCGCCGCGTCGACCCGAAAACAGGAAACGCTCAATTCTCGCATTTG
ACATAAGTTCCCACAAATAAGTTCAAATTCAAACAAACATAACACAGTTTTACGCGTAAATAAGAGCCAAGTTCAGCACG
ACAAACGCAAAAGAGGGCCTTGCAAAAGTTATGGCCATGTCCGGCATCATCTTGGTCGATCTTCACTCCGCACCAACGAG
TCCATCTTGAAGTTCATCGGCACCACCGAATCCACCTCCGGCGCTTGTCCCAACTCCCGCACCGAAATCATCGACATTGC
CACCATATGGAGAAGAGAAAACATCTCCGGAACTGTACCACAGACCGACCGACACGATCATTCTCCTCTTCAAGATTTCT
CTCCTTGCCATATCATGGCATGTTTTGGTGAGGTTGTCCATGTCATCGCGGTTCATTGACATGATCTTGTTCTCTTCGAC
GAGCAACAAGGACATGGATTTGTTTTCAGCGGCGCGTGCTCTTCTCTCCTTAATGGCAGCTTTGCGGAGCCCCTCTTCCT
TGAGCAATTGCCACTTTTCTTGCTTTTCTTTTGCCTTCTTCTCGGCCAACTCTTTCTTGATCTCCAATGACTTCAACAAC
ATCAACTCGTTTGATTGCACCATGGCATCAATCTTCTCCCTCAAGCTCGATGCTTCTTCATCTCTCTTCATCTTCTCCTT
AGTCTTCTTGTCGCTACCGGGCTTGTTCAAATTTCTTGGGCCATCATCATCCTCATCTTCATCCATGTTTGTAAGCGAGC
CTCTCTTCGGTGGCGATTCTTTGTCGATCAACTTCCACTTCTCGCACTTTTGGAGCAACTCCCAACAATGCTATAGTTTG
AAGAATTTGCCTTCTGAAGCTTCCATGTCTTTGTATCTATGTTGGGCAATCTTGTCCTACACAATGTGAACAAAGTGATG
TGATAAATTCTCATGATGTAAATATGATTATGCACAACTTGAACAAAGGCAAAACAAACTCACGTAATCGGACTCCACGG
TCCCACTTGGAGGTGCATTGCGTACTTGCTCCAAGCAAGCTGCCCAACGGCTGCATATAGGCTTGATATTCTCCCAACAC
CCTTGAAGCGACCGAAATGTGCGTGGAGTCCTATTGGGATACTTTACCATAATGTGGAAGTATTGATCTTCGATCCTTTG
TCAATATCCCTTGGCGGTTTGAGAAGTACTCGTGCATGCATCAAGAGACACCGCACTCCATGCTTGAATTAAAGCTTGAT
CTTCCAAAATCGTGTAGTTCTTCAATCTTTGGCTTTTCCTAGATGTTGATTGCGATTGCTTATACGCTTCTGCTTCGATC
TCCGCCAATTCGTCCTCACAACCATGATCATCCACGCCGTCCTCCGTTTCATTGTAGTCGAATGTGGCGAACGAGGCTTG
ATCAATGTCAACGACATTAGTGTCCAACAAGTTCACGAACTTGGAAGTTGGATTGTTTGAACCACAACTATACTGAACGA
TAACAAGTTATGAGATATCACAAAAAATGGCGAAAACGAAAGGAAATTGCCATGACCGAAGACGCATACCTTCCGGCCAT
TTCGTCGAACACCTTGCTTGCGGGGGGAGCGACACCGTTTAACGACATCGTCGGGGCACCTCTTTCCAGGATGGAGTGAG
AGGATGAAGGAGGCGGCTTGTTTGTAGCTGGAATCCTCTTCCTCTTGCCGCCCGCGGCCTTGGTGACCTTCTCCGCCGCC
GGCCGAGATCGCGCAGCAGTGTTGGCGCCCGGAGTGCGAGCCTTCGCGGCGGGGGCTGCCGGATTCCCGCCCTGCACGAC
CACGTTGCCCTACCGCTTGCGGGCAGGCGCGGCGCTAGCTTGAGCGACGGCGGGGCCAACATGGCTGGCGGCGAGACCCA
CCCGAGGGGAAGGAGCGTGCGCGACCTCGACAGTGACGAGGGGCAGCAGGGAGTCGTCCATGTTAGTGAGGGACGACCGC
GGAGGATGCGCCGGAGCGTGCGGTGGTGAGGCAATGGTGGCGGCGGGTGGGGGAGCGGAAAGGCCGCGCGGAAATGTCCC
TCCCGCCAAATCTCGCTGCGGGTAGGGGCTGAGCTCGGGTCGGCCTTCTAACCCGTGAAACTAGAGGTTGGGGGAGAAGT
TTTGTCGCGCCCCGCAAAAATATTTGCAGACCGGGGCGGGATGCTGGGTCTGATCGGGCAGGTTTTCCCGCCCCGACCCG
CACTTTGACGGTTATTTTGCGGGCCGGGGCGGGATGCGGGGTCTGCTAGAGTTGCTCTAATAAGATCTCTCTGCTCACAT
GATAGCTTGGTGAATCCACTGTTTACCCATTATTTCTTTGGGTTCAGCTAGATCACCATAATATGGTTGCAAGTATCCAC
TATGTGTGAGAAAACTTGCCAATAAATTTGAAGTATGAAAACAAAAGCTGCCAGAGTTGCAAATGATAGTTCAACTGGTT
AGAATGCATTGGCCAGCGGAAAGAAAGAAATAAAACATGAAAATTGCGTCGCGATTCGCGTCTCGTGCGCATCCGACGGC
CTGCCTCTTTCACCCGCGTTTGCTACCACTCGGCCTCTCTCTTTCGCTGGCCGCCGCCAAAACCAATCCCCAAACAACGA
TGCTCCGCCGCATCGCCGCCCTACGGCCGCCGCCGCCGCGCGCGGTGGCGGCGGCGCTCGTCGGAGGGGCCGACGCAGGC
TACTCCTCCAAGTCCACCTCCCTCCCCCAGAAGCAGCAGCGCGTCCGCGACCACGCCTTCGACGGCATCATGGAGGTCCA
GAAGCGCGTCCGCCGCTTCCTCGCGCTCCACGCGCTGCTCCTCTACGCCGCCACCCCCACCGCGCCCTCGGGCAAATTCT
CCGCCGGGGGCAGCGGCGCGGTCTCCGTGCCCTTCTCCCGCCTCGGCGCCCTCTCGCGCCGCCAGCTCCGCCTCGCGCCC
CTCGACGCCGGCAACTTCATGCTGCGCCACCCGCACGCCTTCCACCTCTTCCTCCACCCCGTCCACCGCATCCTCCACGC
GCGCCTCACCCCGCGCGCCTCCGCCGCGCTGCGCCTCGAGGCCGACGCCATCGCCTCCTTGCGCCCCGGCGCCGTCCTCC
GCCTCCGCAAGCTGCTCCTCCTCGCGCCCCCGCACCACCGCCTCCGCCTAGAGCACATCCGTCTCCTCCGCCGCGACTTC
GGCCTCCCCGACGACTTCGCCGACTCCATCATCCTGTCCAATCCCGCCCTGTTCCGCCTCACGCCTGACGGGTTCGTCGA
GTTTGTGCCCTCCCCTGACGATCCACCCGACCTCACCGTCGCCGCCGTCGAGCGCTCCCGGGAGCGCCACTACCGCGAGC
ACC---GCGCTCCCGGTGCCGGCGAGGAGGACGCGCGCTTCGCGTTCCCCACCCGCTTTCCGCCGGGCTTTAAGATTGGC
AAGTATTTCCGCATTGCAGTTTGGAAGTGGCAGCGCCTCCCCTACGCTTCCCCGTATGCGGACGTCTCTGGCCACGACCT
GCGCTCACTTGAGGCACAACGCCGCATGGAGAAGCGTGCTGTCGCTGCTGTCCATGAGCTGCTCTCTCTCACAGTCGACA
AGCGTACCACGCTAGAGCGTCTCGCGCTCTTCCGCGACGCCCTTGGTGTGCCAAAGAAGATTAAAGAGTTCTTGCGTAAG
TATCAGGGGATATTCTACATATCAACAAGAGGAAACCAGGGGAAGCTGCACACTGTGTTCCTCCGGGAGGCATACTATAA
AGGGGAGCTTTTAGATTCCAATGAGATACATGACGCAAGGCGGAAGCTGGAGGAGCTGCTCTTGATGAGCCGAGAGAAGG
CGAATTTGGATCGTATGTTCACCAGCATGGGTCGTGGATGGGATGAGCTTGGTGGTGGTCGTCGTGGAGGAGCAGAATTG
AGGGAGAAGTTTCTTGGGGATGCAGGTGGCAGAAAGAGGAAAGTTGGTGCTGGCATTGATGACGATGGTGCCGATAGTGG
GGAGGACTCAGGAGTTGAATCACTCTACATCGAATGAGGAACAGAATCATACAATGACACTGAATGTCATATAGTGAAGC
CTGAGTTCTGAATCTGGCATGGGAACCATATTGGAGGATTGATTTATCATGCTAGCATCTACACCATGGTGTAGTGATCT
TGAGTGATAAGAGAGTGTTATATTCTGAGGTGAAAATTTGAGTGAGAGTTCTCGTCCTAAACTTGCGGACCCTATGAATT
GGGGAAGTTATCACCCTCAATGCTGCCATGCATCTGCACTAGAATGGTTGATGGAATCTTCATTTGCTCAGCATTATGTG
AAGGGACAAAGACACAAGCAAGAGAACTCCTTTCTGCCCCCAAGCTAATTTGATCAGTGTCATTTGACTTGTGAGTA-CT
CTGGATCTATTTCATTCATTTCTCCCTTGGAAAACTGTTTGTGTTACGGATGGAATATCACCATAGCAACGTTCTGTCAT
TCAGTTCTATGTTTTGCAACATACTGTAACCAAACAGTTGATACTGTAATCGGTTAGATGACCTGCAAATAAAATCAGAA
ATGCTATTTTTTTCCTCTGTTGTTTGGCTTCATTCAGACTAAAAATCGAGGGGGCATTCGGGATTTCAGCCGTGGGAATG
TGGGATTGGATGTGCTGCTCCATGTTTTGTGTGTTGTTTTTCTCGTGCACATGGTGGCATAGTGGAATTTTCATGCAGGC
AGCTCATGCTAAGGGGGCATCAGGGTTGCCACTCATGCTGAGGGGGCGTCAGAAAACATCCCAGTGCTTTGGTGATGTTT
TTGTGTTTTTTGGTCAGTGCTTGAACACATGTTTTTGCAGCAAGGGAGTTGAGAGCTATGCGTTCAGCCACTT-TTTTTC
CATTTTCAGTTGAGACGATAAGCAGCTTCGTTGTAGGTTATCTTGTTAGTTTTTCTTAATGTAATTCAGTGGTGATGATG
TTCACTAGTATATAGTTCGGAGAAAATTATATCGGCTTAAATATCAATTTTGAC--------------------------
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>chr5D_1043
CCAAAACC------------------------------------------------------------------------
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-----------------------------------------------------------------ATCCACAAACCACGA
TGCTCAGTCGCATCGCCGCAAT---GCGGCCGCCGCCGCGCGCGGTTGCGGCGGCGCTCGTCGGCGGGGCCGACGCCGGC
TACTCCTCCAAGTCCACCTCCCTTCCCCAGAAGCAGCAGCGCGTCCGCGACCACGCCTTCGACGGCATCATGGAGGTGCA
GAAGCGCGTCCGCCGCTTCCTCGCGCTCCACGCGCTGCTCCTCTACGCCGCCACCCCCACCGCGCCCTCGGGCGCCTTCT
CCGCCGGGGGCAGCGGCGCGGTCTCCGTGCCCTTCTCCCGCCTCGGCGCCCTCTCGCGCCGCCAGCTCCGCCTCGCGCCC
CTCGACGCCGGCAACTTCATGCTGCGCCACCCGCACGCCTTCCACCTCTTCCTCCACCCCGTCCACCGCATCCTCCACGT
GCGCCTCACCCCGCGCGCCTCCGCCGCGCTGCGCCTCGAGGCCGACGCCATCGCCTCCCTGCGCCCCGGCGCCGTCCTCC
GCCTCCGCAAGCTGCTCCTCCTCGCGCCTCCGCACCACCGCCTCCGCCTAGAGCACATCCGTCTCCTCCGCCGCGACTTC
GGCCTCCCCGACGACTTCGCCGACTCCATCATCCTGTCCAATCCCGCTCTGTTCCGCCTCACGCCTGACGGGTTCGTCGA
GTTTGTGCCCTCCCCTGACGACCCACCCGACCTCACCGTCGCCGCGGTCGAGCGCTCCCGGGAGCGCCACTACCGCGAGC
ACC---GCGCTCCCGGCGCCGGCGAGGAGGACGCGCGCTTCGCGTTCCCCACCCGCTTTCCGCCGGGCTTTAAGATTGGC
AAGTATTTCCGCATTGCAGTTTGGAAGTGGCAGCGCCTCCCCTACGCTTCCCCGTATGCGGACGTCTCTGGCCACGACCT
GCGCTCACTTGAGGCACAACGCCGCATGGAGAAGCGTGCTGTCGCTGCTGTCCATGAGCTGCTCTCTCTCACTGTCGACA
AGCGTACCACGCTAGAGCGTCTCGCGCTCTTCCGCGACGCCCTTGGCGTGCCAAAGAAGATTAAAGAGTTCTTGCTTAAG
TACCAGGGGATATTTTACATATCAACAAGAGGAAACCAGGGGAAGCTGCACACTGTGTTCCTCCGGGAGGCCTACTATAA
AGGGGAGCTTTTAGATTCCAATGAGATACATGACGCAAGGCGGAAGCTGGAGGAGCTGCTCTTGATGAGCCGAGAGAAGG
CGAATTTGGATCGTATGTTCACCAGCATGGGTCGTGGATGGGATGAGCTTGGTGGTGGTCGTCGTGGTGGAGCAGAATTG
AGGGAGAAGTTTCTTGGGGATGCAGGTGGCAGAAAGAGGAAAGTTGGTGCTGACGATGAGGACGATGGTGCCGATAGTGG
GGAGGACTCGGGAGTTGAATCACTCTACATCGACTGAGGAACAGAATCATACAACGACACTGAATGTCATATAGTGAAGC
CTGAGTTCTGAATCTGGCATGGGAACCATATTGGAAGATTGATTTATCATGCTAGCATCTACACCATGGTGTAGTGATCT
TGATCGATAAGAGAGTGTTATATTCTGAGGTGAAAATTTGAGTGAGAGGTCTTATCCTAAACTTGCGGACACTATGAATT
GGGGAAGTTATCACCCTCAATGCTGCCATGCATCTGCACTAGAATGGTTGATGGAATCTTCATTTGCTCAGCATTATGTG
AAGGGACAAAGACACAAGCAAGAGAACTCCTTTCTGCCCCCAAGCTAATTTGATCAGTGTCATTTGACTTGTGAGTA-CT
CTGGATCTATTTCATTCATTTCTCCCATGGAAAACTGTTTGTGTTACGGATGGAATATCACCATAGCAACGTCCTGTCAT
TCAGTTCTATGTTTTGCAACATATTGTAACCAAACAATTGATACTGT-------------------AAATAAAATCAGAA
ATGCTATTTTTTCCCTCTGTTGTTTGGCTTCATTCAGACTAAAAATCGAGGGGGCATTCGGGATTTCAGCCGTGGGAATG
TGGGATTG------CTGCTCCATGTTTTGTGTGTTGTTTTTCTCGTGCACATGGTGGCATAGCAGAATTTTCATGCAGGC
AGCTCATGCTAAGGGGGCATCAGGGTTGCCGCTCATGATGAGGG--CGTCAGAAAACATCCCAGTGCTTTGGTGATGTTT
TTGTGTCTTTTGGTCAGTGCTTGAACACATGTTTTTGCAGCAGGGGAGTTGAGAGCTATGCATTCAGCCACTTTTTTTTC
CATTTTCAGTTGAGACGATAAGCAGCTTCGTTGTGGGTTATCTTGTTAG-TTTTTTTAATGTAATTCAGTGGTGATGATG
TTCACTAGTATATAGTTCGGAGAAAATTATATCGGCTTAAATATCAATTTTGAC--------------------------
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>chr6D_1726
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-------------------GACCCGCCTGACCTCACCGTCGCTGCCGTCGAGCGCTCCAGGGAGCACCACTACCGCGAGC
ACCATGGTGCTCCCGGCGCTGGCGAGGAGGACGCGCGCTTCATATTCTCCACCCTCTTTCGGCCAGGGTTTAAGAATGGC
AAGTATTTCCGCATTGCAGCTTGGAAGTGGCAGCGCCTCCCA------------TATGCTGACGCCTCTGGCTACGACCT
ACGGTTGGTCGAGGCACAGCGCCGCATGGAGAAGCGAGCCGTCGCGGCCGTCCATGAGCTGCTCTCTCTCACCGTCGAGA
AGCGTACCACGCTTGAGCGTCTCGCGCTCTTCCGTAACGCCCTTGGTGTGCCAAACTAGATTAAAGAGTTCTTGCTTAAG
TACCAGGGGATATTTTACATATCCACAAGGGGAAACCAAGGGAAGTTGCACAACGTTTTCCTCCGGGAGGCATACTACAA
GGGGGAGCTCGTAGATTCCAATGAGATACACGACGCAAGGCAGAAACTAGAGGAGCTGCTCTTGATGAGCCGAGAAAAGG
CAAATTTGGATCGTATGTTCACCAGCATGGGCCGTGGATGGAATGAGCTT----GTGGTGGTCGTGGAGGAGCAGACTTG
AGGGACAAGTTTCTTGGGGATGCAGGTG----------------------------------------------------
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>SNPs
S--SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS--------------------------------S--------------------S----------------
---S--------------S----------------------------------------------------------SSS
SSSSSS-------------S--------------S----S----S------S--------------------S----SS-
------------------------------------------------S------------------S---------S-S
---------------S-----S----SS-SS-----------------------------------------------S-
-------------------S---S-----SS--S-----S--------------------------SS------S-----
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------------------------------------------------------------------------------SS
--S---------------S---------------------S--------------------------S--S---------
S-SS----------S--------------S--------------------------------------------------
--------S-----------------S--SS------------S--------------S---------------------
S------------------------------------------S---S--------------------------------
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-------------------------S------------------------------------------------------
--------S--------------------------------------------------S--------------------
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----------------------------------------------S--S------------------------------
---------------------------S----------------------------------------------------
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------------------------------------S-------------------------------------------
-------------S--------------------------------------S---------------------------
---------------------------------------------------------------S----------------
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-------------S------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------S-------------------S---
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-------------------S--S------------S----------------------------------------S---
------------------------------------------S--------------S----------------------
-------------------------------------------------------------S---------------S--
--------------S-----S-------------------------S-----------------------S--------S
-------------------------------------------------------------S------------------
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-----------------------------------------S--------------------------------------
------------------------------------------------------------------------------S-
------------------------S--------------S----S-----------------------------------
----S-----------------------------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_212
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--------------------------------GTGTTGGCGGAATCAGCATC----------------------------
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>reverse_4108
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---------------------------GTCATCCTGTCCAATCCCGC---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------
>forward_403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GAGGTCTGCAACTGGGG
AAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_4848
--------------------------------------------------------------------------------
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-----------------------------------------------CGCTGACGATGAGGACGATG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>forward_404
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGGTCTGCAACTGGGG
AAAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_4937
--------------------------------------------------------------------------------
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--------------------------------------------------------GCACTGAATGTCATATAGTGTAGC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_3387
--------------------------------------------------------------------------------
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-------ACTGGCCAGCGGAAAGAAAA-----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_5642
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CGGGGCGTCAGAAAAATCCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
