>input_sequence_49364
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--------------------------------------------------------------CCCAACTCGTTTCCTGCA
GCTCGTGTCGTGAGAAGAGGAGGCCGGAGACGACGGGGGCCATGGAGAGCGAGCAGGTGAAGCGGCGGTTCGGGCGGTGC
CCCTACTGCCGCGCCATGATCTACCAGGACCCGCAGGCCGTCATCTACTACTGCAGCAAGTGCCGCACGCCCATCCGAGG
CAAGAACCCGGAGCCCACGGACGACACCGAGTACTCGCTGGCGCAGCTCGAGATCCTCTCCTTCGACACCATGTCCACCT
ACTCCGACGAGACGGATCCGCCCAATGGCGGAAACCTCGAGCCGGGCAGCCGGGACAACGGGGTCGCGTCCTCCTCGTCC
GCGTACCGGCCCTACAGCGCGATCAGGACCGGTCCAAGGAGCGGCGATCTGGGCCGGCACGACGAAGCGGATCAGGTTCG
GCGAAGCGGGTCGCCGCTCCACAGCCGCGTGAGCGAGCTCCGGCCGGCGTCCCGGAGGACCAGGCGGCCGGCGAGCGCTG
ACCTCGACGCGCCCAAGGACGGAGGCGGCGAGTTCGACGTGCCGCGGACGAGGTCGGCCTCGTCCTACGGCCGCCGGGCG
TCGCCGCTCAACTCGCAGGAACTCGAGGCGGCGATGGGCATGGTGGGGGATGGACCGGCCGCTGGTGTGGCCTCGAGATC
GCCGCTGGCTGACCCGGGGTTCCAGCAGAACCTCCTGCACGCTCTCGAGAACCTCCGGAAGCTCATCGTCGCCGTCGAGG
AGCCGCTCAGAGTCGACGCGCCCCGGCTCGCTCCTGGTGTGCCTCCCAAGAGCGCGCCTGGCAGCAACAGCGCCCCTCAG
AAAGTCACGCGGCGCGACTCCCGCATCCTGCGCCGCCTCGAGTCGCAGCTCGCCCAGGCATTGCCGGCCACCGACAGCGG
CCGGCGCCTTGGCAAGCCCAACACCTCGTCGTCATTGTCTTCGTGGATGTCCGCGTCGGCGTCGGCATTGGCACCGGTGT
CGGAACCGGCATCGGCATCGAGCAGCCGGCGCGGGGCGTCGGCGAGGCACCTAATCTGCCGCCCGGTCATGGGCGGCACG
CCGTTCGTCCTCTGCGACAAGTGCGAGGAGATACTGCTGCTACCGGCCGGCCTATCTGTAGACAAATTCGCCAGGCTGCA
GTGCGGCGGCTGCGACGAAATGCTCGAGGTGACGCTGCCGGCGAGGGGCGGCGGCTCGACGACGGACCGGCCGAGGAAGA
TATTCTCCGCGCCGCAGCCAGCTGGTTTTGGCGCCGACGACGCGGAGGAGCAGAACACGCGTGCAACTGCGAGGAGCCGT
TTGAGCGGCGAGCAGCTACGGCAGGGCCCCGACCATGGGCTACTCCACCACGTGCTCGGCTACAGCTCGGTGAGCTCGGT
TCTCCGGAGCCGTCGGTACGACGACGAGGACAGCTGAGCAAACATTTGCCTTCCGCTTCTCCTGGCGCGTAAAGATGCAA
TTGAATTGTGGATATTTACAACCATTCTTCATTTTTTTGTTATTGTGTAAGAGATCTGATT-------------------
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>chr3A_1_TraesCS3A01G342600
GGCGGAGGGGTAGTACAGCAGCGACGACT------GATCACACCGGTATACAACAAGGACGAAGGAACCGGGTGAGAAAA
GCGGGACTCCGGGTGAGTTTTTTGTGTGGGCAAGGGTGTCGGAGTCTGACGTGGCGGCTATCCAGACGCC-GCAAACCTT
CTCAAGATTTGTTTCTAGCGTTCAAATTTGCTTCTAGTTCGCAAGAATTCAAACATACGTACGGGCGTTGAAGGGCTTAA
AGTGTCCGGACATTTATGGGTGGTTTGATGCACGTGGTTAGATGCCCTGGTCTGTACCACTCCCAGGATCCAAGTAGCAC
TTGGCAGTGGGAAAGTCGCCTTCTGAATTCTTCAGGGAGATG---GGGGAGCGCTCGCAGGCAGGACCAGGTCCCCTAT-
--TCTTCGCTTTCAACGCCAGTGCACCTACCGAATGAATTCACTCGTTGCTCTAACGCGCCCGTCAACGCGGGGGTTTGG
AAGCAGCGATCCGCGCTCCGCCTCCGGCTCCGGCCCCTTCCTAAACGTGTGGTGTGGTGCCTTCCTCTTATTTGGCCTCG
TCGAGAATTGTCATCCTCACATCTCTTCTCCCCGCTGGCTGCTTCCGCGCTCGCTGTCACGGGAGCTGGAGGGAGACTTT
TCTGCTGCTTCGCTTCCTCGCCCGGTCGTCCTGCTCCTACTGGTTGCTTGCTTGCTTTGGGATCCGCGTTG-----CAGA
AAAGAAAATACGCAGAGCTATTTTATC---TTCTTCGCTCTGCGCCCGTGGGAGATCGGGCTGCGAATGATCAGCGAGCG
GTGGACGAAGAGACGAGGAATCTGAGACTGAGAATTTGACCGGCATCGATCGAGGTAAACCCTCCATCAGTTCTTGGTCC
TGCTCATGAA-----------TTCTTGCCGACTAGGGTAGGTTGGATAACAGAGGACGCGATCATGTAGAAATCTCGATG
CAT-------ATGGGGGATGGTGGTCTCTCCAACCCTAGCTGCCCACTGATTCGACATGCCAGATGCTATGA--------
-------------------------------------------------------TTGCTAACCCAACTCGTTTCCTGCA
GCTCGTGTCGTGAGAAGAGGAGGCCGGAGACGACGGGGGCCATGGAGAGCGAGCAGGTGAAGCGGCGGTTCGGGCGGTGC
CCCTACTGCCGCGCCATGATCTACCAGGACCCGCAGGCCGTCATCTACTACTGCAGCAAGTGCCGCACGCCCATCCGAGG
CAAGAACCCGGAGCCCACGGACGACACCGAGTACTCGCTGGCGCAGCTCGAGATCCTCTCCTTCGACACCATGTCCACCT
ACTCCGACGAGACGGATCCGCCCAATGGCGGAAACCTCGAGCCGGGCAGCCGGGACAACGGGGTCGCGTCCTCCTCGTCC
GCGTACCGGCCCTACAGCGCGATCAGGACCGGTCCAAGGAGCGGCGATCTGGGCCGGCACGACGAAGCGGATCAGGTTCG
GCGAAGCGGGTCGCCGCTCCACAGCCGCGTGAGCGAGCTCCGGCCGGCGTCCCGGAGGACCAGGCGGCCGGCGAGCGCTG
ACCTCGACGCGCCCAAGGACGGAGGCGGCGAGTTCGACGTGCCGCGGACGAGGTCGGCCTCGTCCTACGGCCGCCGGGCG
TCGCCGCTCAACTCGCAGGAACTCGAGGCGGCGATGGGCATGGTGGGGGATGGACCGGCCGCTGGTGTGGCCTCGAGATC
GCCGCTGGCTGACCCGGGGTTCCAGCAGAACCTCCTGCACGCTCTCGAGAACCTCCGGAAGCTCATCGTCGCCGTCGAGG
AGCCGCTCAGAGTCGACGCGCCCCGGCTCGCTCCTGGTGTGCCTCCCAAGAGCGCGCCTGGCAGCAACAGCGCCCCTCAG
AAAGTCACGCGGCGCGACTCCCGCATCCTGCGCCGCCTCGAGTCGCAGCTCGCCCAGGCATTGCCGGCCACCGACAGCGG
CCGGCGCCTTGGCAAGCCCAACACCTCGTCGTCATTGTCTTCGTGGATGTCCGCGTCGGCGTCGGCATTGGCACCGGTGT
CGGAACCGGCATCGGCATCGAGCAGCCGGCGCGGGGCGTCGGCGAGGCACCTAATCTGCCGCCCGGTCATGGGCGGCACG
CCGTTCGTCCTCTGCGACAAGTGCGAGGAGATACTGCTGCTACCGGCCGGCCTATCTGTAGACAAATTCGCCAGGCTGCA
GTGCGGCGGCTGCGACGAAATGCTCGAGGTGACGCTGCCGGCGAGGGGCGGCGGCTCGACGACGGACCGGCCGAGGAAGA
TATTCTCCGCGCCGCAGCCAGCTGGTTTTGGCGCCGACGACGCGGAGGAGCAGAACACGCGTGCAACTGCGAGGAGCCGT
TTGAGCGGCGAGCAGCTACGGCAGGGCCCCGACCATGGGCTACTCCACCACGTGCTCGGCTACAGCTCGGTGAGCTCGGT
TCTCCGGAGCCGTCGGTACGACGACGAGGACAGCTGAGCAAACATTTGCCTTCCGCTTCTCCTGGCGCGTAAAGATGCAA
TTGAATTGTGGATATTTACAACCATTCTTCATTTTTTTGTTATTGTGTAAGAGATCTGATTCTTT--TGGGGCGATGAGG
AGGATGAGTAGTTTTTCTCTCTTCTTTTTTGGAAGCCAGGATGAATAGTTATTTGATTCATCAAAATACTGCTATTTTAG
TGTACATACTACTAAATCAAACTGGGGGGTTCCATTGCATTGCACCAAACCAACGCCAGGTCCTAGGAGGCGCGCACTCG
CCCCCGCGTCGTCTCCTCTGGAGGC----GACTCGGGCGGATCCCCGACCCCCGCCGCCGAAGCCCACCCCCTCCTCCCG
CTCCTCCCTCGCCGCCGCCGGCACACGTCACTGGGCAAAGCCCGCTGGCAGCTGGCGGCAGCGGGACCAACCCTTTTTAT
CCGCGCGGGGAGCTCGTGGCGGCTG---GCGGCTGCTGGATCTCGCGGTGGTGCGCGGCGGTTGTCCGGCTAGGCTGGCT
CTCGAGTTGCGGCGGCTCGGGGTTTGCCGGTGTTGGCTGCTGGGCGGCCCGTGCGGTGGAGCCGGGCTCGCCCTGGGTTG
GTGCGGGCGCACGTACATCTGGCCCAGAGTTGGCGGGT----------TTGCGTGGCTCTAGATCTGGGCGAGCGACCGT
GTCCTACGGCCTACCTCCCGCCATCCCGCG----------------------CTTCTGCGCCGGTGGTGCCTGCTGCCGG
CTCCGG-CTGGTCCAGCTCATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGGCGGCTCTTGCGGCCCCTCT
TCTCGTGGCGCAGTGGGGGTGCTCCT--CTCCCCTCCCAGGGCCTGCTGCGGCGGCCAGAGGTGACCCGGTCTTCGGATT
TTGAGGCGAGGCATTCGTGT-TTGGCTCCAGGTGAAAACCTTGCAGAGACCTCGGTCGATGCCGGTGACGCGCGATGCTT
TTTGGTGTCGTTCTCCTCCCTGTAGGCGCGTTCCTGAGGAGTCCAATTCACCCAAATCCCTCGAGTCTGGGGTCTCCGGA
CGAAAGTCCATGATCTGATTT-GCTGGATCGGGCGACGATGGCGTCGTGTACATCGCTACCTCCTTG
>chr3D_1
GGCGGAAGGGTAGTACAGCGGCGACGACTGTCTCGGATCACGCCGGTATACAACAAGGACGGAGGAACGGGGTGAGAAAA
GCGGGACTCCGGGTGAGTTTTTTGTGTGGGTGGGGGTGTCGGAGTCCGACGTGGCGGCTATCCGGACGCCCGCAAACCTT
CTCAAGATTTGTTTCTAGCGTTCAAATTTGCTTCTAGTTTGCAAAAATTCAAACATACGAACGGGTGTTGAAGGGCTTAA
AGTGTCCGGACATTTATGGGTGGTTCAATGCACGTGGTTGGATGCCCTGGTCTGTACCACTCCCAGGATCCAAGTAGCAC
TTGGCAGTGGGAAAGTCGCCTTCTGAATTCTTCAGGGAGA-G---GGGGAGCGCTCGCAGGCAGGACCGGGTCCCCTACT
ACTCTTCGCTTTCAACGCCAGTGCACCAACCGTATGAATTCACTCGTTGCTCTAACGCGCCCGTCAACGT--GGGTTTGG
AAGCAGCGATCCGCGCTCCGGCTCCGGCCCATT-CCTTTCCTAAACGTGTGGCGTGGCC---TCCTCTTAATTGGCATCG
TCGAGAATTGTCATCCTCACATCTCTTCTCCCCGCTGGCTGCTTCCTCGCTCGCTGTCACGGGAGCTGGAGGGAGACTTT
TCTGCTGCTTCGCTTCCTCGCTCGGTCGTCCGGCACCTACTGGTTGCTTGCTTGCTTTGGGATCCGCGTTGGAGAACAGA
AAATCAAATACCCCGAGCGATTTTATC---TTTGCTCT-----GCCGGTGGGAGATCGGGC-------------------
-----CGTAGAGACGAGGAATCCGATACTGAGAATTTGGCTGGCATCGATCGAGGTAAACCCACTATCAGTTCTTGGTCC
TGCCCATGAATTCTCGCCCTGTTCTTGCCGACTAGGGTATGTTGGATAACAGAGGACGCGATCATGTAGAATTCTCGATG
CAT-------ATGG----------TCTCTCCAACCCTAGCTGCCCACTGATTCCACATGCCAGATGCTTTGCAGTGGT-G
GAGGACTAATTTGAGAGACGAATCCCCAATCCAACACGGAGGAGGGCATTGCTATTTGTTAACCCAACTCGTTTCCTGCA
GCTAC-----TGAGAAGAGGAGGCCGGAGACGACGGGGGCCATGGAGAGCGAGCAGGTGAAGCGGCGGTTCGGGCGGTGC
CCCTACTGCCGCGCCATGATCTACCAGGACCCGCAGGCCGTCATCTACTACTGCAGCAAGTGCCGCACGCCCATCCGAGG
CAAGAACCCGGAGCCCACGGACGACACCGAGTACTCGCTCGCGCAGCTCGAGATCCTCTCCTTCGACACCATGTCCACCT
ACTCCGACGAGACGGATCCGCCCAATGGCGGAGACCTGGAGCCCAGCAGCCGGGACAACGGGGTCGCGTCCTCCTCGTCC
GCGTACCGGCCCTACAGCGCGATCAGGACCGGTCCAAGGAGCGGCGATCTGGGCCGGCACGACGAAGCGGATCAGGTTCG
GCGAAGCGGGTCGCCGCTGCACAGTCGCGTGAGCGAGCTCCGGCCGGCGTCGCGGAGGACCAGGCGGCCGGCGAGTGCTG
ACCTCGACGCGCCCAAGGACGGGGGCGGGGAGTTCGACGTGCCGCGGACGAGGTCGGCCTCGTCCTACGGCCGCCGGGCG
TCGCCGCTGAGCTCGCAGGAACTGGACGCCGCGATGGCCTTGGCGGGGGATGGACCGGCCGCTGGTGTGGCTGCGAGATC
GCCGCTGGCTGACCCGGGGTTCCAGCAGAACCTCCTGCACGCTCTCGAGAACCTCCGGAAGCTCATCGTCGCCGTCGAGG
AGCCGCTCAGGCTCGACGCGCCCCGGCTCGCTCCCGGCGTGCCTCCCAAGAGCGCGTCTGGCAGCAACAGCGCCCCTCAG
AAAGTCACGCGGCGCGACTCCCGCATCCTGCGCCGCCTCGAGTCGCAGCTCGCCCAGGCATTGCCGGTCACCGACAGCGG
CCGGCGCATCGGCAAGCCCACCACCTCCTCGTCATTGTCTTCGTGGATGTCGGCGTCGGCGTCGGCATTGGCACCGGTGT
CGGCACCGGCATCGGCATCGAGCAGCCGGCGCGGTGCGTCGGCGAGGCACCTAATCTGCCGCCCGGTGATGGGCGGCACG
CCGTTCGTCCTCTGCGACAAGTGCGAGGAGATACTGCTGCTACCGGCCGGCCTATCTGTAGACAAATTCGCCAGGCTGCA
GTGCGGCGGCTGCGACGAAATGCTCGAGGTGACGCTGCCGGCGAGGGGCGGCGGCTCGACGACGGACCGGCCGAGGAAGA
TATTCTCCGCGCCGCAGCCAGCTGGTTTTGGCGCCGACGACGCGGAGGAGCAGAACACGCGTGCAACTGCGAGGAGCCGT
TTGAGCGGCGAGCAGCTACGGCAGGGCCCCGACCATGGGCTACTCCACCACGTGCTCGGCTACAGCTCGGTGAGCTCGGT
TCTCCGGAGCCGTCGGTACGACGACGAGGACAGCTGAGCAAACATTTGCCTTCCGCTTCTCCTGGCGCGTAAAGATGCAA
TTGAATTGTGGATATTTACAACCATTCTTCATTTTTTTGTTATTGTGTAAGAGATCTGATTCTTT--TGG-GCGATGAGA
AGGATGAGTAGTTTTTCTCTCTTCTTTTTTGGAAGCTAGGATGAATAGTTATTTGATTCATCAAAATACTGCTATTTTAG
TGTACATACTACTAAATCAAACT---------------------------------------------------------
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>chr3B_338
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------------------------GAATTCTTCAGAGAGAGGGGAGGGTAGAGCTCGCAGGCAGGACCGGGTCCCCTACT
ACTCTTCGCTTTCAACGCCAGTGCACCTACCGTATGAATTCACTCGTTGCTCTAACGCGCCCGTCAACGT--GGGTTTGG
AAGCAGCGATCCGCGCTCCGGCTCCGGCCCATT-CCTTTCCTAAACGTGTGGCGTGGCC---TCCTCTTAATTGGCATCG
TCGAGAATTGTCATCCTCACATCTCTTCTCCCCGCTGGCTGCTTCCTCGCTCGCTGTCACGGGAGCTGGAGGGAGACTTT
TCTGCTGCTTCGCTTCCTCGCTCGGTCGTCCTGCTCCTACTGGTTGCTTGCTTGCTTTGGGATCCGCGTTG-----CAGA
AAAGAAAATACGCAGAGCTATTTTATCTTCTTTGCTCT-----GCCCGTGGGAGATCGGGCTGCGAATGATCAGCGAGCA
GTGGACGAAGAGACGAGGAATCTGAGTCTGAGAATTTGACCGGCGTCGATCGAGGTAAACCCTCCATCAGTTCTTGTTCT
TGCTCAGGAATTCTCGCCCTGTTCTTATCAAGTAGGGTAGATTGGATAACAGAGGACGCGATCATGTAGAATTCTCGATG
CATCTGAGGGATGG----------TCTCTCCAACTCTATCTACGAATTGGACACGCCGAATGTTCCCCTCCTTTGGAGCG
GAGGACTAATTAGAGAGAATAATCCCCGATCGAATACGGAGGAGAGCATTGCTAAC------CCTACCTCATTTCCTGCA
GCTCGTGTCGTGAGAA---GAGGCCGGAGACGACGGGGGCCATGGAGAGCGAGCAGGTGAAGCGGCGGTTCGGGCGGTGC
CCCTACTGCCGCGCCATGATCTACCAGGACCCGCAGGCCGTCATCTACTACTGCAGCAAGTGCCGCACGCCCATCCGAGG
CAAGAACCCGGAGCCCATGGACGACACCGAGTACTCGCTCGCGCAGCTCGAGATCCTCTCCTTCGACACCATGTCCACCT
ACTCCGACGAGACGGAGCCGTCCAATGGCGGGGACCTCGAGCCGACCAGCCGGGACAACGGGGTCGCGTCCTCCTCGTCC
GCGTACAGGCCCTACAGCGCGATCAGGACCGGTCCAAGGAGCGGCGATCTGGGCCGGTACGACGAGGCGGAGGTTCGAG-
--GAAGCGGGTCGCCGCTCCACAGCCGCGTGAGCGAGCTCCGACCGGCGTCGCGGAGGACCAGGCGGCCGGCGAGCGCTG
ACCTCGACCCGCCCAAGGACGGGGGCGGAGAGTTCGACGTGCCGCGGACGAGGTCGGCCTCGTCCTACGGCCGCCGGGCG
TCGCCGCTGAACTCGCAGGAACTCGAGGCGGCGATGGGCATGTCGGGGGATGGACCGGCCGCTGGTGCGGCCTCGAGATC
GCCGCTGGCTGACCCGGGGTTCCAGCAGAACCTCCTGCACGCTCTCGAGAACCTCCGGAAGCTCATCGTCGCCGTCGAGG
AGCCACTCAGAGTCGACGCGCCCCGGCTCGCTCCCGGCCTGCCTCCCAAGAGCGCGTCTGGCAGCAACAGCGCCCCTCAG
AAAGTCACACGCCGCGATTCCCGCATCCTGCGCCGCCTCGAGTCGCAGCTTGCACAGGCATTGCCGGCCACCGGCAGCGG
CCGGCGCCCTGGCACGGCCACCACCTCATCATCATTGTCTTCGTGGATGTCGGCGTCGGCGTCGGCATTGGCACCGGCAT
CGGCACCGGCATCGGCATCGAGCAGCCGGCGCGGTGCGTCGGCGAGGCACCTAATCTGCCGCCCGGTGATGGGCGGCACG
CCGTTCGTCCTCTGCGACAAGTGCGAGGAGATACTGCTGCTACCGGCCGGCCTATCTGTAGACAAAATCGCCAGGCTGCA
ATGCGGCGGCTGCGAGGAAATGCTCGAGGTGACGCTGCCGGCGAGGGGCGCCGGCTCGACGACGAACCGGCCGAGGAAGA
TATTCTCCGCGCCGCAGCCAGCTGGTTTTGGCGCCGACGACGCGGAGGAGCAGAACACGCGTGCAACTGCGAGGAGCCGT
TTGAGCGGCGAGCAGCTACGGCAGGGCCCCGACCATGGGCTACTCCACCACGTGCTCGGCTACAGCTCGGTGAGCTCGGT
TCTCCGGAGCCGTCGGTACGACGACGAGGACAGCTGAGCAAACATTTGCCTTCCGCTTCTCCTGGCGCGTAAAGATGCAA
TTGAATTGTGGATATTTACAACCATTTTCA----TTTTTTTATTCTGTACGGGATCTGATTTTTTGGTGG-GCGATGTGG
AGGATGAATAGTTTTTCTCTTTTCTTTTTTGGAAGCTAGGATGAATAGTTATTTGATTCATG-AAAAACTGCTATTTTAG
TGTGCATGCTACTAAATCAAA-----------------------------------------------------------
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>chr3A_2691
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--------------------------------------------------------------------------CACTCG
CCCCCGCTTCGTCTCCTCTGGAGGC----GACTCGGGCGGACCCCCGACCCCCGCCGCCGAAGCCCACCCCCTCCTCCCG
CTCCTCCCTCGACGCCGCCGGCACACGTCACTGGGCAAAGCCCGATGGCAGCTGGCGGCGGCGGGACCAACCCTTTTTAT
CCGCGCGGGGAGCTCCTGACGGCTG---GCGGCTGCTGGATCTCGCGGTGGTGCGCGGCGGTTGTCCGGCTAGGCAGGCT
CTCGAGTTCCGGCGGCTCGGGGTTTGCCGGTGTTGGCTGCTGGGCGGCCCGTGCGGTGGAGCCGGGCTCGCCCTGGGTTG
GTGCGGGCACGCGTACATCTGGCCCAGATTTGGTGGGT----------TTGCATGGCTCCAGATCTGGGCGAGCGACCGC
GTCCTA----------------------CG----------------------CTTCTGCGCTGGTGGTGCCTGCTGCCGG
CTCCGG-CTGGTCCAGCTCATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGGCGGCTCTTGCGGCCCCTCT
TCTCGTGGTGTAGTGGTGGTGCTCCT--CTCCCCTCCCAGGACCTGCTGCGGCGGCCAGAGGTGACCCAGTCTTCGGATT
TTGAGGCGAGGCATTCGTGT-TTGGCTCCGGGTGAAAACCTTGCAGAGACCTCGGTCGATGCTCGTGACGCGCGAAGCTT
TTTGGTGTCGTTCTCCTCCCTGTAGGCGCATTCCTGAGGAGTCCAATTCACCCAAATCCCTCGAGTCTGGGGTCTTCGGA
CGAAAGTCCATGATCTGGTTT-GCTGGATCGGGCGACGACGGCGTCGTGTACATCGCTACCTCCTTG
>chr7D_2692
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---------------------------------------------------------------------------ACTCG
CCCCCGCGTCGTCTCCTCTGGAGGCAGGCGACTCGGGCGGACCCCCGACCCCCGTCGCCGAAGCCCACCCCCTCCTCCCG
CTCCTCCCTCGCCGCCACCGGCACGCGTCGCTGGGCAAAGCCCGCTGGCGGCG------G-CGGGACCAACCTTTTTT-T
CATGCGGGGA--------GCGGCTG---GCGGCCGATGGATCTCGCGGTAGTGCGCGGCGGCTGTCCGGCTAGGCGGGCT
CTCGAGTTGCGGTGGCTCGGGGTTTGCCGGTGTTGGCTGCTGTGCGGCACGTGCGGTGGGGCCGGACTCGGCCTGGGTTG
GTGCGGCCGCGCGTGCATCTGACCTAGATTTGGCGGGT----------TTGCCTGGCTCCAGATCTGGGCATGCGGCCGC
GTCCTA----------------------CGTCCTCCCTCCTGCCATCCCGCGCTTCTGCGCGGGGGGTGTCTGCTACTGG
CTCCAG-CTGGTCCAGCTCATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGACGGCTCTTGCGGCC--TCT
TCTCGTGGCAAAGTGGGGGTGCTCCTCTCTCCCCTCCCCGGGCCTGCTGCGGCGGCCAGAGGTGACCCAGTCTTTAGATT
TTGAGGCAAGGCGTTCGTGTGTTGGCTCCGGGTGAAAACCTTGTAGAGACCTCGGTCGATGCCGGCGACGCATGATGCTT
TTTGGTGTCGTTCTCCTTCCTATAGGCGCGTTGCTGAGGAGTCAAGTTCACCCAAATCCCTCGAGTCTGGGGTCTCCAGG
CAAAAGTCCATGATCTGGTTT-GCTAGATCGGGCGACGACGACATTGTGTATGTCGCTACCTCCTTG
>chr7A_2693
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----------------------------------------------------------------------------CTCG
CCCCCGCGTCGTCTCCTCTGGAGGC----GACTCGGGCGGACCCCCGACCCCCGCCGTTGAAGCCCACCCCCTCCTCCCG
CTCCTCCCTCGCCGCCGCCGGCACACGTCACTGGGCAAAGCCCGCTGGCAGCTGGCGGCGGTGGGACCAACCCTTTTTAT
CCGCGCGGGGAGCTCCTGGCGGCTG---GCGGCTGCTGGATCTCGCGGTGGTGCGCGGC--TTGTCCGGCTAGGCGGGCT
CTCGAGTTGCGGCGGCTCGGGGTTTGCCGGTGTTGGCTGCTGGGCGGCCCGTGCGGTGGAGCCGGGCTCGCCCTGGGTTG
GTGCGGGCGCGCGTACATCTGGCCCAGATTTGGAGGGT----------TTGCGTGGCTCCAGATCTGGGCGAGCGACCGC
GTCCTA----------------------CGGCCTCCCTCCCGCCATCCTGCGCTTCTGCATCGGTGGTGCCTGCTGCCGG
CTCCGG-CTGGTCCAGCTCATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGACGGCTCTTGCGGCCCCTCT
TCTCGTGGCGCAGTGGGGGTGCTC--CTCTCCCCTCCCAGGGCCTGCTGCGGCGGCCAGAGGTGACTCGGTCTTCGGATT
TTGAGGCAAGGCGTTCGTGT-TTGGCTCCGGGTGAAAACCTTGCAGAGACCTCGGTCGATGCCGGTGACGCGCGATGCTT
TTTGGTGTCATTCTCCTCCCCGTAGGGGCGTTCCTGAGGAGTCCAATTCACCCAAATCCCTCGAGTCTGGGGTCTCCGGA
CGAAAGTCCATGATCTGGTTT-GCTGGATCGGGCGACGACGGCGTCGTGTACGTCGCTACCTTCTTG
>chr4A_2696
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-------------------------------------------------------------------------------G
CCCCCGCGTCGCCGCCTCTGGAGGC----AACTCGGGCGGACCCC-GACCCCCGCCACCGAAGCCCACCCCCTCCTCCCG
CTCCTTCCTCGCTGCCGCCGGCACACGTCACTGGGCAAAGCCTGCTGGCGGCTGGCGGCG-CGGGACCAACCCTTTTT-T
CCGCGCGGGGAGCTCCTGGCGGCTG---GCGGCTGCTGGATCTCGCGGTGGTGCGCGGCGGCTGTCCGGCTAGGCGGGCT
CTCGAGTTGAGGTGGCTCGGGGTTTGCCGGTGTTGGCTGTTGGGTGGCGCGTGCGGTGGAGTCGGACTCGGCCTGGGTTG
GTGCGGGCGCGCGTGCATCTGGCCCAGATTTGGCGGGT----------TTGCGTGGCTCCAGATCTGGGCGGGCGACCGC
GTCCTA----------------------CGGCCTCCCTCCCGCCATCCTGCACTTCTGCGCCGGTTGTGCTTGCTGCCGG
CTCTAG-CTGGTCCAGCTCATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGACGGCTCTTGCGG-CCCTCT
TCTCGTGGTGCAGTGGGGGTGCTC--CTCTCCCCTCCCAGGGCCTGCGGCGGCGGCCTGAGGTGAACCGGTCTTCAGATT
TTGAGGCGAGGCGTTCGTGT-TTGGCTCCGGGTGAAAACCTTGCAGAGACCTGGGTCGATGCCGGTGACACACGATGCTT
TTTGGCGTCGTCCTCCTCCCTGTAGGCGCGTTGCCGAAGAGTCCAGTTCACCCAAATCCCTCGCCTCTGGGGTCTCCGGA
TGAAAGTCCCTGATCTGGTTT-GCTAGATCGGGTGACGACGGCGCCATGTACGCCGCTACCTCCTTG
>chr1A_2697
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CCCCCGTGTCGTCTCCTCTGGAGGC----GACTCGGGCGGACCCCCGACCCCTGCCGCCGAAACCCACCCCCTCCTCCCG
CTTCTCCCTCGCCGCCGCCAGCACACGTCGATGGGCAAAGCCCGCTGGCGGCTGGCGGTGGCGGGACCAACTCTTTTTTT
CCGCGTGGGGAGCTCCTGGTGGTTG---GCGGCTGCTGGATCTCGTGGTGGTGCGTGGCGGCTGTCCAGCTAGGCAGGCT
CTCGAGTTGCGGCGGCTTGGGGTTTGCCGGTATTGGCTGCTGTGCGGCGCGTGCGGTGGAGCCGGACTCGGCCGGGGTTG
AGGCGGGCACGCATGCATCTGACCCAGATTTGGCGGGT----------TTGTGTGGCTCCAGATCTGGGCGTGCGGCCGC
GTCCTATGGCCTCCCTCCTGCCATCCTGCG----------------------CTTGTGCGCCGGTGGTGCCTGCTGCCGG
CTCCGG-CTGCTCCAACTCATGTGAGGGTAGAGGTGGAGGGGGTCCCAGGCTTCATGGCAACGGCTCTTGTGG-CCCTCT
TCTCGTGGCGCAGTGGGGGTGCTC--CTCTCCCTTCCCCGGGCTTGCTGTGGCGGCCAGAGG-----CGGTCTTCGGATT
TTGAGGCGAGGCGTTCGTGT-TTGGCTCCGGGTGAAAACCTTGCAGAGACCTCAGTCAATGCCGGTGACGCGTGATGCTT
TCTGGTGTCATCCTCCTCCCTGTAGGCGCGTTGCTGAGGAGTCTAGTTCATCCAAATCCCTCGAGTCTAGGGTCTTCGGG
CGAAAGTCCATGATCCGATTT-GCTAGATCGGGCGACGACGGCGTCGTGTACGTTGCTACCTCCTTG
>chr1B_2697
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CCCCCGCGTCGTCTCCTCTGGAGGC----GACTCGGGCGGACCCCCGACCCC-GCCGCCGAAGCCCACCCCTCAC-CCCC
CTCCTCCCTCGCCGCCGCCGGCACACGTCACTTGGCAAAGCCCGCTGGCGGCTGGCGGCGGTGGGACCTGCCCTTTTT-T
CCGT-TTGGGAGCTCCAGCCGGCTGGCTACGGCTAGTGGATCTCGTGGTGGTGCGCGGTGGCAGTCCGGCTTGGCGAGCT
CTCGAGTTCCGATGGCTTGGGGTTTCCCGGTGGTGGATGTTGTGCGGCGCGTGCGGTGGAGCCGGGCACGACCTGTGCTG
GTGCAGGCGCGCGTGCATCTGCTCG-GATCTGGATGGTGCCGCCGCCATTGCGTGGCTCCAGATCTGGGCAGGCGCCCGC
ATTCTTCGGCCTCCCTCCTGCCACCCTCCG----------------------CTTCTGCGCCGCTGGTGCCTGCTGCCGG
CTCCGGGCCGGTCCAACTTATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGACGGCTATTGCGG-CCCTCT
TCTCATGGCGCAGTGGGGGTGCTC--CTCTCCACTCCCCGGGGCTGCTGCGGCGGCTGGAGGTGACCCGGTCTTTGGATT
TTGAGGCGAGGCGTT-GTGT-TTGGCTCCGGGTGAAAACCTTGCAGAGACCTCGGTTGATGCCGGTGACGCACGGTGCCT
TTTGGTGTCGTCCTCTTCCCTGTAGGCGCGTTGCTGAGGAGTCCAAATCACTCAAATCCCTCAAGTCT-GGGTCTCCTGG
CGAAAGTCCATGATCTGGTTTTGCTGGATCGGACGATGATGGCGTTGTGTACGTCGCTACCTCCATG
>chr2D_2697
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CCCCCGCGTCGTCTCCTCTGGAGGC----GACTCGGGCGGACCCCAGACCCC-GCCGCCGAAGCCCACCCCTCAC-CCCC
-TCCTCCCTCGCCGCCGCCGGCACATGTCGCTGGGCAAAGCCCGCTGGCGGCTGGCGGCGGCGGGACCTGCCC-TTTT-T
CCGT-TTGGGAGCTCTAGGCGGCTGGCTGCGGCTGGTGGATCTCGTGGTGGTGCGCGGCGGCAGTCCGGCTTGGCAAGCT
CTCGAGTTCTGGCGGCTCGGGGTTTCCCGGGGTTGGCTGCTGTGTGGCGCGTTCGGTGGAGCTGGGCACGACATGTGCTG
GTGCAGGCGCGCGTGCATCTGCCCG-GATCTGGCTGGTGCCGCCGCCGTTGCGTGGCTCCAGATCTGGGCAGGCGCCCGC
GTTCTCCGGCCTCCCTCCTGCCACCCTGCG----------------------CTTCTGCGCCGCTGGTGCCTGCTGCCGG
CTCTGGGCCGGTCCAGCTTATGTGAGGGTGGAGGTGGAGGGGGTCCCAGGCTTCATGGCGACGGCTATTGCGG-CCCTCT
TCTCATGGCGCAGTGGGGGTGCTC--CTCTCCCCTCCCCGGGGCTGCGGCGGCGGCCGGAGGTGACCCAGTCTTCGGAT-
TTGAGGCGAGGCGTT-GTGT-TTGGCTCCGGGTGAAAACCTTACAGAGACCTCGGTTGATGCCGGTGACGCGCGGCGCCT
TTTGGTGTCGTCCTCCTCCCTGTAGGCGCGTTGCTGTGGAGTCCTAATCACTCAAATCCCTCAAGTCT-GGGTCTCCGGG
CGAAAGTCCATGATC----------------------------------------------------
>chr3A_2795
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----------------------ACACGTCGCTGGGCAAAGCCCGCTGGCGGCTGGCGGCGGTGGGACCTGCC--TTTT-T
CCGT-TTGGGAGCTCCAGGCGGCTGGCTGCGGCTGGTGGATGTCGTGGTGGTGCGCGGCGGCAATCCGGCTTGGCAAACT
CTCGAGTTCCGGCGGCTCGGGGTTTCCCGGGGTTGGCTGCTGTGCGGCGCGTGCGGTGGAGCCGGGCACGACCTATGCTG
GTGCAGGCGCGCGTGCATCTGCCCG-GATCTGGCTGGTGCCGCCGCCGTTGCGTGGCTCTAGATCTGGGCAGGCGCCCGC
GTTCTCCGGCCTCCCTCCCGCCACCCTGCG----------------------CTTTGGCGCAGCTGGTGCCTGCTGCCGG
CTCCGGACCGGTCCAGCTTATGTGAGGGTGGGGG----GGGGGTCCCAGGCTTCATGGCGACGGCTATTGCGG-CCCTCT
TCTCATGGCGCAGTGGGGGTGCTC--CTCTCCCCTCCCCGGGGCTGCTGCGGCGGCCGAAGGTGACCCGATCTTCGGATT
TTGAGGCGAGGCGTT-GTGT-TTGGCTCCGGATGAAAACCTTGTAGAGTCCTCGGTTGATGCCGGTGATCCGCGACGCCT
TTTGGTGTCGTCCTCCTCCCTGTAGGCGCGTTGCTGAAGAGTCCAAATCACTAAAATCCCTCAAGTCT-AGGTCTCCGGG
CGAAGGTCCATGATTTGGTTTTGCTGGATCGGGCGATGACGACGTTGTGTACGTCGCTACCTCCATG
>SNPs
------S------------S---------------------S-------------------S------S-----------
------------------------------SSS-------------S----------------S----------------
---------------------------------------S----S--------------S-----S--------------
-------------------------SS------------S----------------------------------------
----------------------------------------S---------------------------S---------S-
--------------------------------S------------------------------------SSS--------
--------------------S-------S-SSSS--S---------------S----SSSSS--------S-----S---
----------------------------------------------S---------------------------------
---------------------S----------------------------------------------------------
--------------------------------SSSSSSSSSSS------------------------------------S
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------SSSSSSSSSS-----------------------------S--------------S--S--------
----------------------------------------------------------S---------------------
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---------------------------------------S----------------------------------------
--------------------------------S-----------S-----------------------------------
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---------------------------------------------------S----------------------------
----------------------S-----S---------------------------------------------------
--------S----------------------------------S------------------------------------
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----------------------------------S--S------------------S-----------------------
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--------------------S------S-----------------------S----------------------------
---S------------------------------S--------------------------------S------------
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----------------------------------------------------------------------S---------
------------------------------------S-------------------------------------------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
-----------------------------------------S--------------------------------------
-----------------------------------------------------------S--------------------
---------------S-----------------------------------------------------------S----
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----------S-----------------S--------------------------------------------------S
------------S-------------S-----------------------------------------------------
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-----------------------------S--------------------------------------------------
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>forward_540
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----------------------------------------CTAAACGTGTGGTGTGGTGC--------------------
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>reverse_2021
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--------------------ACACCTCGTCGTCATTGTCT----------------------------------------
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>forward_982
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--CGATGCATATGGGGGATGGT----------------------------------------------------------
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>reverse_2767
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----------------------------------------------AAACCAACGCCAGGTCCTAG--------------
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