>input_sequence_49323
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-----------------------------------------------------ATGGATGATCCGCAGCAAGCAGAAATG
GCTCCGCCGGAAGACGCGCCCGCGCAC------------CCCGTGCCGCACCCGGTGCGCGGCGTCTTCCTCAACTACAT
CGACTACTGGCGGCCACGGTTCTTCGCCCGTCCCTCGGCGCGCCC------CGCGGTCGACTACGGTAACCTCGACTTCC
TCCCCGAC--TATAGCCGGGGGTACAACTCCATCCTGGACCACTGCAACGGGCTCTTGCTCTACGGCAACGCCTGGCTGT
ACTGCGTGGTGAACCCCGCCACGAGGCGGTGGGAGCGTCTCCCGCGCATGGACGCCAACGACTACGTCCCGTATCTGGTC
TTCGACCCAGCCCTGACGCATGGCTACGAGGTGTTGCTGTTCCGCCGCGAGCCCGAGAAGCCCAAGAAGTTCGACCTCAT
TGAGTTTTTGTCTTTGCTGGATGACATGTCGGTCGGCGAGGAGGACGCAGAGAATGAGGGCCAAGATGAACCGGCTGTAG
AACCT------------TTGCCAAGACAGTCCATCGAAGACTTGCATCGTTTGACGGAATGGCCACCGTCACAATGGACG
CTGCCTGTGTTCTCATCGGCTACCG--GAGTGGCAGGAGAGGTCATTTGTCCGGGAAGGAGAGGCTGTCAAGACGATGGC
TAGTATGCAACTGGATGCAGTACAACCCATGGAATGGGGCCCAAGATGGCGTTACAGTGTGTATTGGCGAGGCGTGCTTT
ACGTCCATTGTCGTGGTGCATTTGTTGCAAGGTATGCATCCTAGATCCAAGTGCATAACTATAAAACTCCTTCCATTATA
GTATTGATG----TTTTTTTACTAATTTATATTAGAAAAAATAACTTTCCATCCGTGGATGT------------------
----TTTTTTATATCACCCAATAC--------------------------------------------------------
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---------------------ATTTTAGACTATTAAAAC-TTTTAGCGAGTAAATTTGTGTTTTGTAGGCTATCTTTACC
TGAGGGTAAATACCGGGTACTTAATACACCAGTAGATTTTGAGGAAAGCAAACATGCACGACCATATCTTGGGAAGTCAG
AAAAAGGAGTGTATTTTGCGACAATTCACAAGTACAACAACCTTCTTCAGGTTTGGAACCTCAATGAATCAAGCGGTCCA
ATAGATTGGATACTAGAGCATACTATCGAGCTTGATGAATCTACTTTGTGGGCCGCGGCGCGTTTCTACCAACACGAGAT
TAATGGACCTTGGATCTTAGAGGACAATAACAACGATGATGTGGAAAACAAGATGGTGCCGCTAAAAGAAAATATTGAAT
GGAACTCCGATGATGATAATGTAATGAGTAATCAAGGTGGTTGTGAAGAACAGTACGGTCACATTTATTTCTTGGGTTTT
CACCCGTACAAAGAGGTAATTTTCTTAGGGTTGTCATTTATAGGAGTGGCTTATCATTTGAATAGCTCAAAAGTCCAATA
CCTCGGAAAACTACGCCCAAAAGATTACTGCACAGCGTATTCAAATGGCATATATGAATCATTTATGTACACTCCCTGCA
TGGTTGGGGAGCTTTCAGAGACTCCTCCATAA------------------------------------------------
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---------
>chr4B_1_TraesCS4B01G201700
TGTCCACCCGGGTTTAAGTCTCGTCATCTCCGTTCATTCTCTGCTAGAAAAGCTGGGTCATCGCTGCACCTCATGGTCGT
GAATACCATTAGGACTCGTGAATATCGTTAGGGCATGCCCATTTTAACACAAGTCTTGATTCATTTTATTGCCATGTTGT
ACCTTGTAACATCTTAGTTTCTTAGAAGTTTCCGTAGGCAGGTGTAAGTTGCTCAGTAAGGTTTCTCCTGAGAGAACCTT
GTGTTGTATTGTAAAAGAATGTATGTATCATAACTTTGTCACACACATTTGTTAGAAGCTCACATGGGCAGGTGTAGGTG
GCTGCAGTG-AGTTCCTCTGCCTTTGTTGTACTATAAAAGACTC----TATGTATGTATGTATGTATGTATAGACAAGCT
GGGTGGTCAGGGGAATAAAATGTACACCTTCTGACGTGCTGGTGGTGTTC----TATACTTCTATGCATTTTCCTGTGAG
TGAACATAAGAAATGCCTAAGAGCATTTTGAACAGATGATGTAAAACTGGTTTCCTAATTATTTTTTTGCCTTTCTCTTT
TACGTCTCAATTGCATACGCATTAAAGCAAAACTTGATACGATAGTTAAAACTCATGTCAAGAATGGAGATATTTTTTTC
TTCCTTCCTTTTTGGGCGCGATCTGATCAAGCCAATGGAAATACTCCAGGAACAAAGCGAATGGAAATACTCCAGGAACA
AGAACCGATCGGTACGCCAACTAATCAGCCTCCAATAATTATCAATTTTATCATGTTACCCGGATGGCCGGATGATACGA
TCCGATCCCGTGGAGCAATGCTACACATACGTAGACTTACATTGGGTCTTTGGGCATCGTCAGCACAGCAGCCGGGCTAT
AAGCTTTCTAGTTTCGTTATAACTTGAGTTGATATCCCGCCCAAGCACGCCGCGTGCAGTTGACTCGCGCCTCCGCTGAT
CTGCTCTGCATCAAGAACCCAAGATCCAG----GCTAGGCTGCCGTGGAAGCCATGGATGATCCGCAGCAAGCAGAAATG
GCTCCGCCGGAAGACGCGCCCGCGCAC------------CCCGTGCCGCACCCGGTGCGCGGCGTCTTCCTCAACTACAT
CGACTACTGGCGGCCACGGTTCTTCGCCCGTCCCTCGGCGCGCCC------CGCGGTCGACTACGGTAACCTCGACTTCC
TCCCCGAC--TATAGCCGGGGGTACAACTCCATCCTGGACCACTGCAACGGGCTCTTGCTCTACGGCAACGCCTGGCTGT
ACTGCGTGGTGAACCCCGCCACGAGGCGGTGGGAGCGTCTCCCGCGCATGGACGCCAACGACTACGTCCCGTATCTGGTC
TTCGACCCAGCCCTGACGCATGGCTACGAGGTGTTGCTGTTCCGCCGCGAGCCCGAGAAGCCCAAGAAGTTCGACCTCAT
TGAGTTTTTGTCTTTGCTGGATGACATGTCGGTCGGCGAGGAGGACGCAGAGAATGAGGGCCAAGATGAACCGGCTGTAG
AACCT------------TTGCCAAGACAGTCCATCGAAGACTTGCATCGTTTGACGGAATGGCCACCGTCACAATGGACG
CTGCCTGTGTTCTCATCGGCTACCG--GAGTGGCAGGAGAGGTCATTTGTCCGGGAAGGAGAGGCTGTCAAGACGATGGC
TAGTATGCAACTGGATGCAGTACAACCCATGGAATGGGGCCCAAGATGGCGTTACAGTGTGTATTGGCGAGGCGTGCTTT
ACGTCCATTGTCGTGGTGCATTTGTTGCAAGGTATGCATCCTAGATCCAAGTGCATAACTATAAAACTCCTTCCATTATA
GTATTGATG----TTTTTTTACTAATTTATATTAGAAAAAATAACTTTCCATCCGTGGATGT------------------
----TTTTTTATATCACCCAATAC--------------------------------------------------------
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---------------------ATTTTAGACTATTAAAAC-TTTTAGCGAGTAAATTTGTGTTTTGTAGGCTATCTTTACC
TGAGGGTAAATACCGGGTACTTAATACACCAGTAGATTTTGAGGAAAGCAAACATGCACGACCATATCTTGGGAAGTCAG
AAAAAGGAGTGTATTTTGCGACAATTCACAAGTACAACAACCTTCTTCAGGTTTGGAACCTCAATGAATCAAGCGGTCCA
ATAGATTGGATACTAGAGCATACTATCGAGCTTGATGAATCTACTTTGTGGGCCGCGGCGCGTTTCTACCAACACGAGAT
TAATGGACCTTGGATCTTAGAGGACAATAACAACGATGATGTGGAAAACAAGATGGTGCCGCTAAAAGAAAATATTGAAT
GGAACTCCGATGATGATAATGTAATGAGTAATCAAGGTGGTTGTGAAGAACAGTACGGTCACATTTATTTCTTGGGTTTT
CACCCGTACAAAGAGGTAATTTTCTTAGGGTTGTCATTTATAGGAGTGGCTTATCATTTGAATAGCTCAAAAGTCCAATA
CCTCGGAAAACTACGCCCAAAAGATTACTGCACAGCGTATTCAAATGGCATATATGAATCATTTATGTACACTCCCTGCA
TGGTTGGGGAGCTTTCAGAGACTCCTCCATAATATGTATGCAAAGGTTACCATATGTGAACTGCAAATGGTTCAACAATG
CAAGAAAAAGTGTATCCTAAAGTTCGAGTCTTATTTTCAGCCATGAATACCATATTATTTTATACA-TTTCACAATCTTC
TGAGGTAGTTTGTCATATGGTTATGTAATTTGTACTTCTTATGCATTTGAACCAACCAGTTGTCTTCTTGCATAGTTCTA
CCTTCTTTTGAGGGAGCATAAGTCTACATGTAAGTACCGCAAAGTGTAGAAACATATATACTGGTTACAAATGTCTTACT
T-CCCCACGCTCTTCGATCACTTCTGGGCATGCAAAAGTAGTCATGTGCTTTTGAAATCGTGTCAAATTTTGCGCCATGT
TAATCATCATAATATAGTTCTATATCAATTGCATGTGAAAAG-GCATTCATCAATGGTAATGTCAAGGAAGAACTATGTG
TCAAACAACCCCC---TTTTGAAGGCCACAAGCATCCTGACAGAGTGTATAGGCTCCACAAAGTCCTTTATGGGCCCAAG
CAAGCTCCTTGATCTTGGTATGATACACTCAAGAAGTTCTTG-GAAAAGAAGGGCTTCAAACTAGGAGGCACTGAATCCA
CTCTCTTCACCAAATCTTATAATGGTGATCTATTCACATGTTAA-ATATATGTGGATGATATTATCTTTGACAATACTAA
CTCTCATTACAACGGATAATTTGCCAAATTAATAGCCGAA-GAATGTCAAATGTCCATGATGGGGGAACTAAAAATATTC
TTAT---TCCAAGTTCGTCAACAACGGAATGACATCTTTGTCTCTCAGGAAAAATACCTCAAAGCCGC-CTGAAGAAATG
TTTCATGGAAAATTGGAAAGACATCAAGACTCCAATGCCAACACATGGACACCTTGAC-CCCAAGATAATGGTAAATCAT
TCAACAAAAAGGTATATTGCTCCG---TTGGCTTTCCATTTTATCTGTGTGCATCTAGGCCCAACATTATGTTTAGTGTT
TGCATGTGT
>chr4D_1
TGTCCACCCGGGTTTAAGTCCCGTCTTCTCCGTTCATTCTCTGCTAGAAAAGCTGGGTCATCGTTGCACCTCATGGTCGT
GAATATCATTAGGACTCGTGAATATCGTTAGGGCATGCCCATTTTAACATAAGTCTTGATTCATTTTATTGCCATGTTGT
ACCTTGTAACATCTTAGTTTCTTAGAAGTTTCCGTAGGCAGGTGTAAGTTGCTCAGTAAGGTTTCTCCTGTGAGAACCTT
GTGTTGTACTGTAAAAGAATGTATGTATCATAACTTTGTCACATACATTTGTTAGAAGCTCACAT-GGCAGGTGTAGGTG
GCTGCAGTGGAGTTCCTCTGCCTTTGTTGTACTATAAACGACAGTATGTATGTATGTATGTATGTATGTATAGACAAGTT
GAGTGGTCAGGGGAATAAAATGTACACCTTCTGACGTGTTGGTGGTGTTC----TATACTTCTATGTATTTTCCTGTGAG
TGAACGTAAGAAACGCCTAAGAGCATCTTCAACAAATGATGTAAAACTGGTTTCCTAAATTTTTTTTTTG----------
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---------
>chr4A_3
--TCCACCTGGGTTTAAGTCTCGTCATCTCCGTTCATTCTCCGCTAGAAAAGCTGGGT---------ACCTCATGGTCGT
GAATATCATTAGGACTCGTGAATATCGTTAGGGCATGCGCATTTTAACATAAGTCTTGATTCATTTTATTGCCATGTTGT
ACCTTGTAACATCTTAGTTTCTTAGAAGTTCCTGTAGGCAGGTGTAAGTTGCTCAGTATGGTTTGTCCTGAGAGAACCTT
GTGTTGTACTGTAAAAGAATGTAGGTATCATAACTTTGTCACATACATTTGTTAGAAGCTCACATGGGCAGGTGTAGGTG
GCTGCAGTGGATCTCCTCTGCCTTTGTTGTACTATAAAGA---C----TATGTATGTATGTATGTATGTATAGACAAGCT
GAGTGGTCAGGGGAATAAAATGTACACCTTCTGACGTGTTGGTGGTGTTCTATATATACTTGTATGTATTTTCCTGTGAG
TGAATGTAAGAAACGCCTAAGAGCATCTTCAACAAGTGATGTAAAACTGGTTTCCTGGA---TTTTTTGCCTTTCTCTTT
TACGTCTCAATTGCATACGCATTAAAACAGAACTTGATACGATAATTAAAACTCATGTCAAGAATCGAGATCTTTTGTTC
TTTCTTCCTTTTTGGGTGCGATCTGATCAAGCCAATGGAAATACTCCAGGAACG--------------------------
AGAACCGATCGGTATGCCAACTAATCAGCCTCCAATAATT---------ATCATGTTACCCGGATGGCCGGATGATACGA
TCCGATCCCGTG---------------------------CATTGGGTCTTTGGGCATCGTCAGCACAGCAGCCGGGCTAT
AAGGATTCTAGTTTCGTTATAACCTGAGTTGATATCCCGCCCAAGCACGCCGCGTGCAGTTGACTCGCGCCTCCGCTGAT
CCGCTCCGCATCAAGAACCCAAGATCCAA----GCTAGGCCACTGCGGAAGCCATGGATGATCCGCAGCAAGCAGAAATG
GCTCCGCCGGAAGACGCGCCGGCCGGCGTCCCCGCGCATCCCCTGCCACACTCGGTGCGCGGCGTCTTCCTCAACTACAT
CGGTTACTGGCGGCCACGGTTCTTCGCCCGTCCCTCGGCGCGCCGCCCG---GCGGTCGACTACGGTGACCTCGACTTCC
TCCCCGACTATATAGCCGGGGGTACAACTCCATCCTGGACCACTGCAACGGGCTCTTGCTCTACGGCAACGCCTGGCTGT
ACTGCGTGGCCAACCCCGCCACGAGGCGGTGGGAGCGTCTCCCGCGCATGGACGCCAACGACTACGTCCCGTATCTCGTC
TTCGACCCCGCCCTATCGCGTGGCTACGAGGTGTTGCTGTTCCGCCGCGAGCCCGAGAAGCCCAAGAAGTTCGACCTCAT
TGAGTTTCTGTCTTTGCTGGATGACATGTCGGTCGGCGAGGAGGACGTAGAGAATGAGGGCCAAGATGAACCGGCTGGAG
AACCT------------T------------CCATGGATGACTTGCATCGTTTGACGGAATGGCCACAGTCACAATGGACG
CTGCCTGTGTTCTCATCGGCCACTGGAGAGTGGCAGGAGAGGTCATTTGTCCGGGAAGGAGAGGCTGTCAAGACGATGGC
CAGTATGCAACTGGATGCGGTACAACCCATGGAATGGGGCCCAAGATGGCGCTACAGTGTGTATTGGCGAGGCGCGCTTT
ACGTCCATTGCCGTGGTGCATTTGTTGCAAGGTATGCATTCTAGATCGAAGTGCATAACTACAAAACTCCTTCAATTATA
GTGTTGATATGTTTTTTTTTACTAATTTATATAATCTTTTTT-ACTTTCTATTCATGGATTT------------------
----TTTTATATCATCTATACTCCATCCATTCCATAATGTAGTGCTTCCTCTATCCCCGTGCTTCAACTTTGACCGTAAA
TTTAACTATCAAGATCGATTGCGGCGGGAGCAAAAGTTATATCAGTGAATTCGTATTCGAAAGAAATTTTTAATTATATA
ACTTTTTCTCCCGCCGCAGTCGGTCTCGTTCGTTAAATTTATGGTCAAAATTCGACCTCGGGAAGCACGGGCGCACTATA
TTTTGAAATGGAGGGAGTAATATTTTAGACTATTAACATATTTTAGCGAATAAACTTGTGTTTTGTAGGATATCTTTATC
AGATGGTAAATACCGGGTATTTAATACACCAATAGATTTTGAGGAAAGCAAACATGCATGTCCTTATCTTGGGAAGTCGG
AAAAAGGGGTGTACTTTGTGACAATTCACAAGTACAATAACCTTCTTCGTGTTTGGAACCTCAGTGAATCAAGCGGTCCA
ATAGATTGGGTACTAAAGCATACTATCGAGCTTGATGAATCTACTTTGTGGGCCGCAACGCGTTTCTACCAACACGAGAT
TAATGGACCTTGGATCTTAGAGGACAATAACAACGATGATGTGGAAAACAAGATGGTGCCGCTAAAAGAAGATATTGAAT
GGAACTCCGATGA-GATAATGTAATGAGTAACCAAGGCGGTTGTGAAGAACCATACGGTCACATTTATTTCTTGGGTTTT
CACCCGTACAAAGAGGTAATTTTCTTAGGGTTGTCATTTATAGGAGTGGCTTATCATTTGAATAGCTCGAAAGTCCAATA
CCTCGGAAAACTACGCCCAAAAGATTACTGCACAGCGTATTCAAATGGCATATATGAATCATTTATGTACACTCCATGCA
TGGTTGAGGAGCTTTCAAAGACTCCTCCATAATATGTACGCAAAGGTTACCATATGTGAACTGCAAATGGTTCAACAGTG
CAAGAAAAAGTGTATCATAAAGTTCGAGTCTTATTTTCAGCCATGAATACCATATTATTTTATACA-TTCG-CAATCTTC
TGAGGTAGTTTGTCATCTGGTTATGTAATTTGTACTTTTTATGCATTTGAACCAACCAGTTGTCTTCTTGCATAGTTCTA
CCTTCTTTTGAGGGAGCATAATTCTACATGTAAGTACTGCAAAGTGTAGAAATATATGTACTGGTTACATATGTCTTACT
TCCCCCACGCTCTTCGATCACTTCTGGGCATGCAAAAGTAGTCCCGTGC-TTTTAAATCGTGTCAAATTTTGCACCATGT
TAATTATCATAATATAGTTCTATATCAGTTGCATGTGAAAAG-GCATTCATCAATGGTAATATCAATGAAGAACTATGTG
TCAAACAACCCCC---TTTTGAAGGCCACAAGCATCCTGACAGAGTGTATAGGCTTCACAAAGTCCTTTATGGGCTCAAG
AAAGCTCCTTCAGCTTGGTATGATACACTCAAGAAGTTTTTG-GAAAAGAAGGGCTTCAAACTAGGAGCCAATGATTCCA
CTCTCTTCACCAAATCTTATGATGGTGATCTATTCACGTGTT-A-ATATATGTGGATGATATTATTTTTGACAGTACTAA
CTCTCATTACAATGAATAATTTGC-AAATTAATAGCCGAA--AATATCAAACATCCATGATGGGGGAACTAAAAATATTC
TGAT---TCCAAGTTCATCAAAAACGGAATGACATCTTTATCTCTCAGGAAAAATACCTCAAAGCCGC-TTGAAGAAATG
TTTCATGGAAAATTGGGAAGACATCAAGACTCCAATGCCAACACATGGACACCTTGACTCCCAAGATAATGATAAACCAT
TCAACAAAAAGGTATATTGCTCCA---TTGGCTTTCCGTTGTATCTGTGTGCATCTAGGCCCAACATTTTGCTTAGTATT
TGCATGTGT
>chr4D_536
TTTTC---------------------------------------------------------------------------
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----------------------------------------------------------------------CTTTCTCTTT
TACGTCTCAATTGCATACGCATTAAA-CAAAACTTGATAAGATAATTAAAACTCATGTAAAGAATCGAGATCTTTCTTTC
TTTCTTCCTTTTTGGGCGCGATCTGATCAAGCCAATTG-AATATTCCAGGAACG--------------------------
AGAACCGATCGGTACGCCAACTAATCAGTCTCCAGTAATT---------ATCATGTTTCCCGGATGGCCTGATGATACGA
TCCGATCCCATG---------------------------CATTGGGTCTCTGGGCATCGTCAGCACAGCAGCCGGGCTAT
AAGCTTTCTAGTTTCGTTATAACCTGAGCTGACATCCCGCCCAAGCACGCCGCGTACAGTTGACCTGCTCCTCCGCTGAT
CCGCTCTGCATCAAGAATCCAAGATCCAAGCTAGCTAGGCCGCCGCGGAAGCCATGGATGATCCGCAGCAAGCAGAGACA
GCTCCGCCGGAAGACGCGCCCGCGCGC------------CCCCTGCCGCACTCGGTGCGCGGCGTCTTCCTCAACTACAT
CGGGCACTGGCGGCCACGGTTCTTCGCCCGTCCGTCGGCGCGCCCCGCGGGCGCGCCCGACTACGGTGACCTCGACTTCC
TCCCCGACTATA--GCCGGGGTTACAACTCCATCCTGGATCACTGCAACGGCCTCCTGCTCTACGGCAACGCATGGCTGT
ACTGCGTGGTGAACACCGCCACGAGGCGGTGGGAGCGTCTCCCGCGCATGGACGCCAACAACTACGTCCCGTATCTGGTC
TTCGACCCCGCCCTGTCGCATGGCTACGAGGTGCTCCTGTTCCGCCGCGAGCCCGACAAGCCCAAGAAGTTCGACCTCGT
TGAGTTTCTGTCTTTGCTGGATGACATGTCGGGTGTCGAGGAGGACGCAGAGAATGAGGACCAAGATGAGCCGGCTGTAG
AACCTTTGCCAAGACAGT------------CCATCGATGACTTGCATCGTTTGACGGAATGGCCACCGTCACAATGGACG
CTGCCTGTGTTCTCATCGGCTACTGGAGAGTGGCGGGAGAGGTCATTTGTCCGGGAAGGAGAGGCTGTCAAGACGATGGC
CAGTATGCAAC------------AACCGATGGAATGGGGCCCAAGATGGCGTTACAGTGTGTATTGGCGAGGCGCGCTTT
ACGTCCATTGTCGTGGTGCATTTGTTGCAAGGTATGTATTCTAGATCGAAGTGCATAACTACAAAACTCCTTCCATTATA
GCGTTGATATG-TTTTTTTTACTAATTTATATAATCTTTTTT-ACTTTAGACTATCAACATTTTAGTTATGGTGCATTCC
TGGATTTTTTATATCACCTACAAC--------------------------------------------------------
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---------------------ATTTTAGACTATTAACAT-TTTTAGCGAATAAATTTGTGTTTTGTAGGTTATCTTTATT
AGATGGTAAATACCGGGTATTTAATACACCAATAGATTTTGAGGAAAGCAAACATGCATGTCCTTATCTTGGGAAGTCGG
AAAAAGGGGTGTACTTTGCGACAATTCACAAGTACAACAACCTTCTTCGCGTTTGGAACCTCGGTGAATCAAGCGGTCCA
ATAGATTGGGTACTAAAGCATACCATCGAGCTTGATGAATCTACTTTGTGGGCCGCGGCGCGTTTCTACCAACACGAGAT
TAATGGACCTTGGATCTTAGAGGACAATAACAATGATGATGTGGAAGAAAAGATGGTGCCGCTAAAAGAAAATATTGAAT
GCAACTCCGATGATGATAATGTAATGAGTAACCAAGGTGGTTGTGAAGAACAGTATAGTCACATTTATTTCTTGGGTTTT
CACCCGTACAAAGAGGTAATTTTCTTAGGGTTGTCATTTACAGGAGTGGCTTATCATTTGAATAGCTCAAAAGTCCAATA
CCTCGGAAAACTACACCCAAAAGATTACTGCACAGCGTATTCAAATGGCATATATGAATCATTTATGTACACTCCCTGCA
TGGTTGGGGAGCTTTCAGAGACTCCTCCATAATATGTACGCAAAGGTTACCATATGTGAACTGCAAATGGTTCAACAGTG
CAAGAAAAAGTGTATCCTAAAGTTCGAGTCTTATTTTCAGCCATGAATACCATATTATTTTATACATTTCG-CAATCTTC
TAAGGTAGTTTGTCATCTGGTTATGTAATTTGTACTTTTTATGCATTCGAACCAATCAGTTGTCTTCTTGCATAGTTCTA
CCTTCTTTTGAGGGAGCATAATTCTACATGTAAGTACCGCAAAGTGTAGAAACGTATGTACTGGTTACATATGTCTTACT
TC-CCCACGCTCTTCGATCACTTCTGGGCATGCAAAAGTAGTCATGTGC-TTTTAAATCGTGTCAAATTTTGCACCATGT
TAATCATCATAATATAGGTCTATATCAATTGCATGTGAAAAG-GCATTCATCAATGGTAATATCGAGGAAGAACTATGTG
TCAA-----------------------ACAAGCATCCTGACAGAGTGTATAGGCTCCACAAAGTCCTTTATGGGCTCAAG
TAAGCTCCTTGAGCTTGGTATGATACACTCAAGAAGTTTTTTTGAAAAGAAGGGCTTCAAACTAGGAGCCACTGATTCCA
CTCTCTTCACCAAATCTTATAATGGTGATCTATTCACGTGTT-AAATATATGTGGATGATATTATCCTTCACAGTACCAA
CTCTCGTTACAACGAATAATTTGC-AAATTAATAGCTGAA--AATATCAAATGTCCATGACGGGGGAACTAAGAATATTT
TGAT---TCCAAGTTCGTTAAGAACGGAATGACATCTTTATCTCTCAGGAAAAATACCTCAAAGCCGC-GTGAAGAAATG
TTTCATGGAAAATTGGGAAGACATCAAGACTCCAATGCCAGCACATGGACACCTCGACTCCCAAGATAATGGTAAACCAT
TCGAACAAAAGGTATATTGCTCCA---TCGGCTTTCCGTTCTATCTGTGTGCATCTAGGCCCAACATTATGCTTTGTGTT
TGGATGTG-
>chr3D_2908
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--------------------TATATCAAATGGATGTGAAAAGTGCATTCCTCAATGGTAAGCTAGAGGAAGAAGTATATG
TTGCTCAACCCCCAGGTTTTGAAGATCTAAAGCATCCTGACAAAGTCTTCAGACTCAATAAGGCCCTCTATAGCCTCAAG
CAAGCCCCTCGGGCGAGGTATGATACTTTGAAGGAATTCCTC-ATGAAGAAAGGCTTCAAACCCGGTTCACTTGACCCAA
CACTTTTCACCAAAACCTATGATGATGAATTATTTGTGTGCT-AAATATATGTGGATGATATTATCTTTGGCTGTACTGA
CCAACGTTACAGTGACAAATTTTC-CTATATGATGAGTGAGGAATATCAAATGTCTATGATGGGAGAATTGAAATTCTTC
TTAGGTCTTCAAATTCGTCAACAGAGCAACAACATCTTCATATCTCAGGAGAAATACCTCAAGGATGTATTGAGGAAATT
CGGCATGCAAGATTGCAAAGGCGTCAAAATCCCTATGCCCACAAATGGCCATCTATGCACTGATGAAAATGGTATTGACT
TTGATCAAAAGGTATACCGCTCCATGATTGGCTCTTTATTGTATCTATGTGCATCTAGGCCAGATATTATGCTTAGTGTT
TGCATGTGT
>SNPs
---------------------------------------------------------------S----------------
-----S-------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------S----------------------------------S------------------------------------
--------------------------------------S---S-------------------------------------
-S------------------------------------S---------------------------S-------------
-----S-------S------------S--S----S-----------------------S-S-------------------
--------------------------S-----------------S--------------------S-----S--------
--S--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
----------------------------------------SSSSSSSSS-------------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------
-----------------------S--------------------------------------------------------
-S--------------------------S-----------S----S----------------------------------
-------------------------S----------------S--------S----------------------------
--SS---------------------------------------------------------------S------------
--------------------------------------------------------------------------------
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--------S------S----------------------------------------------------------------
-------S------------------------------------------------------------------------
------------------SSSSSSSSSSSS-------S------------------------------------------
-----------------------S--------------------------------------------------------
S-----------------S-------------------------------------------------------S-----
---------------------------------------S-------S-------------S------------------
--S-----S-----------------------S-SSSSSSS-S------S--S-S-----S-------------------
------------------S-S-----------------------------------------------------------
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------------------------------------S-S----------S-------------------S--------S-
S--S---------------S-----------S--------------------------S-S--S--------------S-
-------S-----S----------------------------------SS-------------S----------------
---------S-----S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
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--------------------------------------S--------------------------------------S--
---------------------------------------------------------------------SSS--------
----------------S--------------------S------------------------------------------
---------------------S-----------------------------------S-----------S----------
-------------------------------------------------S---S-------------------S------
-------------------------------------------------------------S------------------
---------------------------------------------------------------------------S----
------------S-------------------------------------------------------S------S----
-------------------------------------S----S------------------------------S------
--------------S---------S--------------------S----------------------------------
---------------------------------------S-----------------------------S----------
----------------------------------------------------------------------------S---
-----------------------S----------------S------------------------------S--------
---------
>forward_823
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---GATCCCGTGGAGCAATGCTA---------------------------------------------------------
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>reverse_2239
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------------------------------------------------------------------------------CC
TGAGGGTAAATACCGGGT--------------------------------------------------------------
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>forward_824
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----ATCCCGTGGAGCAATGCTAC--------------------------------------------------------
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>reverse_3110
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---------------------------------------------------------------------AATGTCTTACT
TCCCCACGCT----------------------------------------------------------------------
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