>input_sequence_49287
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-------------------------------------------------------------------------G------
----TATATATCATCCGTATAGCAATCAGATTGGCCTTCAATCGTACGTAGAGAGCTCTCGCAA----CAAGTGCCAACC
CGCCGGCCGGCCCCAAGGAAGATCGATGGAGACGCTGCCGGACGACATGGTCCTGGAAATCCTGGTACGCATGCCGGATG
CCCCACACCTGTTCCGCTGCGCGGCGACGTGCAAGCGATGGTGGTTCCTCGTAGCACAACCCTCCTTCCTCCGCCGCCGC
TGGCCAGAGGACACGCACCATCCCTCCTCCCTCCTCGGCTTCTTCGCCGAGGAATATCGATCAGCCGGTCCACGGAGCTA
CAAAACTAGGCATGTGCCATCCTTTATTCCGGCGCCCTCGTCGCCCTTTCGGCCTCGCAGCCCCATCGCGAGCTTCGCCG
ACGCCGGCGACATACGGGAATTGCCACTCGCCTCGCGCCGCGGCTTTCTTCTCGTGCATCTCGTCGTGGGCCATCACCTT
TGGGACGCATACAAGGAATTCAACCTGGCGGTGTGCGACCCGCTCACTGGCACGAGCCGTGTGCTGCCCACGCTCAAGTA
CGACAGGCTTTTCAGAATCAAAGGTTGTGCTATTCTAACCGGTGCAGACTGTTGCTCCAAGG------------------
---------AACAACAACAACATCCGGTGTTATCAACCTGCTCGGCCTTCTCCAAAGTGTTAATAATTGGCTTCGACAAT
GATGACCAGCAGTACAGTATCTCCATGTTCTCATCGGATGAGTCGAGCTGGAGGGCGCCTGAAAACTGCTTCGATCCTTC
GGAGCACGGCATTCAGCTGGCGCCTTTACAGTTCAACGCGGTTGTGTGCCAAGGAGCGGCGCACTGGCTCTTCAGGGACA
ATTCAAACTTCTACACGCTGGACGCGAGCGTCGAGACGGGCCATGCCACCTTGACCAAGCTCTCGGTCACACTGGGCCGC
CTCGGCCGCAACTTTAGGGACGTGCCACGGCTAAGCCTAAGCGTCACCAACGGAGTTCTATCGCTGCTCGCCTTGCATAA
GAAATGCCTAAGAGTACAGATCTGGACATGTCGAGGTGACAAAAAGAGCGGAGGTTGCACCAGAGACTGGCGCCACGCTA
AGATGATCGAGCTAGAACGACCGGAACAGAATCATACCAAGATATTAGTGCATTGCATGTGGGCAGGGGAGAGGAGCGGT
GTATTGCTTATCAAGGCAAGCCCCTACTTCAAACGGTGCGTATATGTTGCTAACCTTCAAACCGGGGCAGTGGAGGAGGT
CATCGACAAGTTTTGCAACGAGTGCACGACGCCTATCCCGTTTGAGATTGATTGGCCGGCCTTCTTCGTGTCTCACTTGG
CAGGCGATAGCATCAAGCAGGCTAAATTGGGAGAAACCATACTGAGCATTGCCAACCTTCTCGGGGGCCAATAGTGGG-C
TCTATAATTTTCGGTTCAG----TTGCTATGAGTTGTGCCACA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAAGAGCTACAGGAGATATAGGTTATGTATATGC
ATGGAAGACTTGATGAACCGGCAACCTTTTTCTTTGCATGCAAA------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G359200
AGAACCGAGGGGAAAATAGGCCACATGAAAGTGGTTTTCTCTCCTTATTTGCCACCTAGGACAGCCGTTTCATCAAACAC
GCCCATCCCACCCTCGACAACCTTCATCCTCCCCTGCTGCCACACCACCACCCCGACAACCACTAGCGGTGCCCCTCCCC
GCATATGCCACACCCACCTCCAACCACATGATTTGGTTCATACATTGCCGCCCTTCCATTGCAGTGCAGCAGGCTCCGGC
GAGCCGCCACCGACGAGCTCCCGCGTCGATGCCCTAGCTTCCTCTGTGCTACATCCGAAACCATCTTCCCTGGATCCAAG
CTCTGCCGTGTTCGGCCATCTCTCCCCCGTGGACGAGGTCCTTCTCCCCACCATGCGACGACGACCTTAGATCTGTTCGC
CCTTGCGCTG----------TCTTTGTCGTGGACCTCCCATCTTTCTGCTTGTTGATATGACCCTGCGTGGCTGACCAAG
CCATGATGGGATTATGGGCTCCAGCACCGCAGTGATAAGTGTGTTTGACCAAACTGCCCATCCTACGTGGCAAATGAAGA
GAGAGAAAACCACTTCCAACTGGCGGATTTTT----AGATCTGGTTTTCGATGAAATTAAATCGATTTCGAGACTTGCGA
GACGAAATATTGCCCAACAAATATTGAGGGATCTGATGTATACTTTCGGTAAACTTGAGGGCCAAAAACTTTTTTTTTCT
CTTA-AATAAATTGGTATTCCATGTGTTTAGTTACAA--------TGGTGTTTGCTTTCATTAGCAGTACGTGTCCGGTC
TCTGCATCCGAAGACAATACGTAACCAGGCAAATTCTTTTGTA-----ACAAACAAA----ATCTGAAGCAAAGAAGAGT
AACTCGCACGGCACGCTAAGTCCAGGAGAACTCTC-GGACTCGGACTCTCAACACGATTCGGACGTTAACAGTACGTGAA
TTCCAAATAAATAGAAGTTGCATCGAGAAAGGAGAAACATATATAGAGAACTCACGTAAAACTGTAGGCGAAGG------
----TATATATCATCCGTATAGCAATCAGATTGGCCTTCAATCGTACGTAGAGAGCTCTCGCAA----CAAGTGCCAACC
CGCCGGCCGGCCCCAAGGAAGATCGATGGAGACGCTGCCGGACGACATGGTCCTGGAAATCCTGGTACGCATGCCGGATG
CCCCACACCTGTTCCGCTGCGCGGCGACGTGCAAGCGATGGTGGTTCCTCGTAGCACAACCCTCCTTCCTCCGCCGCCGC
TGGCCAGAGGACACGCACCATCCCTCCTCCCTCCTCGGCTTCTTCGCCGAGGAATATCGATCAGCCGGTCCACGGAGCTA
CAAAACTAGGCATGTGCCATCCTTTATTCCGGCGCCCTCGTCGCCCTTTCGGCCTCGCAGCCCCATCGCGAGCTTCGCCG
ACGCCGGCGACATACGGGAATTGCCACTCGCCTCGCGCCGCGGCTTTCTTCTCGTGCATCTCGTCGTGGGCCATCACCTT
TGGGACGCATACAAGGAATTCAACCTGGCGGTGTGCGACCCGCTCACTGGCACGAGCCGTGTGCTGCCCACGCTCAAGTA
CGACAGGCTTTTCAGAATCAAAGGTTGTGCTATTCTAACCGGTGCAGACTGTTGCTCCAAGG------------------
---------AACAACAACAACATCCGGTGTTATCAACCTGCTCGGCCTTCTCCAAAGTGTTAATAATTGGCTTCGACAAT
GATGACCAGCAGTACAGTATCTCCATGTTCTCATCGGATGAGTCGAGCTGGAGGGCGCCTGAAAACTGCTTCGATCCTTC
GGAGCACGGCATTCAGCTGGCGCCTTTACAGTTCAACGCGGTTGTGTGCCAAGGAGCGGCGCACTGGCTCTTCAGGGACA
ATTCAAACTTCTACACGCTGGACGCGAGCGTCGAGACGGGCCATGCCACCTTGACCAAGCTCTCGGTCACACTGGGCCGC
CTCGGCCGCAACTTTAGGGACGTGCCACGGCTAAGCCTAAGCGTCACCAACGGAGTTCTATCGCTGCTCGCCTTGCATAA
GAAATGCCTAAGAGTACAGATCTGGACATGTCGAGGTGACAAAAAGAGCGGAGGTTGCACCAGAGACTGGCGCCACGCTA
AGATGATCGAGCTAGAACGACCGGAACAGAATCATACCAAGATATTAGTGCATTGCATGTGGGCAGGGGAGAGGAGCGGT
GTATTGCTTATCAAGGCAAGCCCCTACTTCAAACGGTGCGTATATGTTGCTAACCTTCAAACCGGGGCAGTGGAGGAGGT
CATCGACAAGTTTTGCAACGAGTGCACGACGCCTATCCCGTTTGAGATTGATTGGCCGGCCTTCTTCGTGTCTCACTTGG
CAGGCGATAGCATCAAGCAGGCTAAATTGGGAGAAACCATACTGAGCATTGCCAACCTTCTCGGGGGCCAATAGTGGG-C
TCTATAATTTTCGGTTCAG----TTGCTATGAGTTGTGCCACA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAAGAGCTACAGGAGATATAGGTTATGTATATGC
ATGGAAGACTTGATGAACCGGCAACCTTTTTCTTTGCATGCAAAATAAACAAGAATGTACCATGTGCACGTTGGTTAAGA
GGTTTTTCTTGGTCATA----TCAAGCATATGCAATTGGGGTAGTGTGTATATTAGTTTGAGGTGCAGAATGTTGTCTCT
GCGATCTTGTTGTCCGATTTAACCCGTGCTTCTTTACTTGGTGAGCTAGATGAGCCTTTGATGTTTTGTCTAGTAATAAG
GTGTCGCATGGCGTTCTGTTCTGTGAATCGCCGCTATCTAAAATGGAAGTTTGCAGTTTGTTGTAATTAAATAAAACATT
CATTTGCACCTTTGGCACTATCTTGGTTGCTTAATTAACTTGTTCAATACCCTTCCACGAAGTAGATATCAAGGTAAACT
TGTAGAAAATTGTGCTATTTAGCTAGCTCACACGCTAAATGGTCTGCTCATGATCAAATACACAAAGCAAGCAGCACATC
AGTTGAACATGCACCAGGAGAGGATGAGTTAATGGTTCACACCAATGGGAGCGGAGACTCGTCGCTGGACAACGACCTAC
TCGATGGTGATACAGCAATGGTTGTGGGAGGGAAGGTTCCTTTTTTTGTGTGTGGAATACGCTTGAGTATGCGTATCATC
TATTGATAGAGAGGAGAGGGTAGAAGAATACCCGCCTGCAGAGTTACATCGTTACAGCCCAGGTACGGGCAAAGGCCAGA
GGCCGGAAACAAAAAAGCTACGTCTCCCCGCTCACCCGCCTGTCCACTCTAGCTAACCAATCGCTCATGTCGCT------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATGAAAGAACCCTGCAAG
AACCCATTCCCTCCCCACGTTCACGATGAGCCGTAGAACATCTTGCAGCGACGGAGAGGCGTTATTGAAAATGACCGCGT
TCTGGTGCTTCCACATCTCCCAAAGGACCAGCATCGCGAGGGTGTTGAGGTCTTTCCTGGTCCGTTGGCCCGAGGCGAGC
GCCATGCACCAATGTAACAACTGATCGTCCAGCCCCGGAGACCGGTTCTCCTGACCCAAGGCCAAGAGCGCCTGGA
>chr1B_257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GCTCCCGTGTCGATGCCCTAGCCAGCTCTTTGCTGCATCTCAAACCATCTTCCCTAGATCCGAG
CGCTGCCATCTTCGACGATCT---CCCCATGGAAGAGCTCCTTCTCCACACCACACGAAGATGACCTCAGACCCGTTCGC
CCCTCTACCATCACATTTCATCTTCATTGTGGTCCTCCCATCTTTCTGCTCGCTTAAGAGCACCATGTGTGGCCCCAGG-
---TGATGGGAGCATGGACTCCAGCACTCTAGTGATAAGTGTGTTTGACCAAACTACCTGTCCTACGTGGCAAATGAAGA
GTGAGAAAACTACTTCCAAGTGGCCGATTTTCCCGCAGATCTGGTTTTCGACGAAACTTAATCAGTTTTGGGACTTGCGG
GACGAAATATCGCCCAGCAAATATTGAAGGGCCAGATATATACTTTCGGTAAACAGAAGGACTTAAAACATTTTGTCTCT
TAAATAAAAAATTGGTCTTCCATGTGTTTAGTTACAAACTTACAACG-----------------------GTGTCCGGTC
TCTGCATCCGAAGACAATAGGTATCCAGGCAAATTCTTTTGTA-----ACAAACAAACAAAATCTGAAGGAAAGAAGAGT
AACATGCACGGCACGCTGGGTCCAGGAAAGCTCTCAGGACTCGTACTGTCAACACGATTCGGACGTCAACAGTACGTGAA
TTCCAAATAAATAGAAGTCGCATCGAGAAAGGAGAAAC--ATGTAGAGAACTCACGTAAAACTGCAGGCAAAGGTATATA
TATATATATATCATCCGTATAGCAATCAGATTGGCCTTCAATCGTACGTAGAGAGCTCTCGCAAGTCGCAAGCACCAACC
CGCCTGG----CCCAAGGAAGATCGATGGAGACGCTGCCGGACGACGTGGTCCTGGAAATCCTGGTACGCATGCCGGATG
CCCCACACCTCTTCCGCTGCGCGGCGACGTGCAAGCGATGGTGGTTCCTCGTAGCACAACCCTCCTTCCTCCGCCGCCGC
TGGCCAGACGACAGGTACCATCCCTCCTCCCTCCTCGGCTTCTTCGCCGAGGAATATCGATCACCTGATCGACGGAGCTA
CAAAATTAGGTATGTGCCATCCTTTATTCCGGCGCCCTCGTCGCCCTTTCGGCCTCGCAGCCCCATCGCGAGCTTCGCCG
ACGCCGGCGACTTACGGGAGCTGCCACTCGCCTCGCGCCGCGGCTTTCTTCTCGTGCATCTCGTCGCGGGCCATCACCTT
CGGGACGCATACAAAGAATTCAACCTGGCCGTGTCCGACCCGCTCAGTGGCACGAGCCGCGTGCTACCCACGCTCAAGTG
CGACAGGCTTTTCAGAATCAAAGGTTGTGCTATCCTAACCACTGCAGACCATTGCTTCAAGG------------------
---AACAACAGCAGCAGCAGCAGCCGGTGTTATCAACCTGCTCGGCCTTCTCTAAAGTGTTAATAATTGGCTTCGACAAC
GACAACCAACAGTACAGCATCTCTATGTTCTCGTCCGATGAGTCGAGCTGGAGCGCGCCTGAAAACTGCTTCGACCCTTT
GGAGCACAGCATTCAGCTGGCGCCTTTACAGTTCAACGCGGTTGTGTGCCAAGGAGCGGCACACTGGCTCTTCAGGGACA
ATTCAAACTTCTACACGCTGGACGCGAGCGTCGAGACGGGCCATGCCACCTTGACGAAGCTCTCGGTCACACCGGGCCGC
CTCGGCCGCAACTTTAGGGACGTGCCACGGCTA------AGCGTCACCAACGGAGTGCTATCGCTGCTCGCCTTGCATAA
AAAATGCCTCAGAGTGCAGATCTGGACATGTCGAGGTGGCACAAGGAGCGGAGATTGCACCAGAGAGTGGCGCCACACTA
AGATGATCAAGCTAGAACGACCGGAACAAAATCATACCAAGATATTAGTGCATTACATGTGGGCAGGGGAGAGGAGCGGT
GTATTGCTTATCAAGGCAAGCCCCTACTTCAAACGGTCTGTATATGTTGCTAACCTTCAAACTGGGACAGTGGAGGAGGT
CATCAGCAAATTTTGCGACGAGTGCACGACGCCTATCCCGTTTGAGATTGATTGGCCGGCCTTCTTCATGTCTCGCTTGG
CAGGCGATAGCATCAAGCAGGCTAAATTGGGAGAAACCATACTCAACATTGCCAACCTTCTTGGGGGCCAATAGTTTGGG
CCTATAATTTTCGGTTCAG----TTGCTATGAGTTGTGCCACA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAAGAGCTACAGGAGATATAGGTTATGTATATGC
ATGGAAGACTTGATGAATCGGCAACCTTTTTCTTTGCATGCCAATTAAACAAGAATATACCACGTGCATGTTGGTTAAGA
GGTTTTTCTTTGTCATACATATCAAACATATGCAAT--------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr1A_690
AAAAACAT------------------------------------------------------------------------
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----------------------------------------------------------------------TTTTGTCTCT
TAAATAAAAA-TTGGTCTTCCATGTGTTTAGTTACAAACATACAATGGTGTTTGCTTTCATTACCAGTAAGTGTCCGGTC
TCTGCATCCGAAGACAATAG-TAACCAGGCAAATTCTTTTGTACTAGTACAAACAAA----ATCTGAAGCAAAGATGAGT
AACACGCACGGCACTCTAGGTCCAGGAAAACTCTC-GGACTCGGACTCTCAACACGATTCGGACGTTAACAGTACGTGAA
TTCCAAATAAATAGAAGTTGCATCGAGAAAGGAGAAAC--ATATAGAGCACTCACGTAAAACTGTAGGCGAATG------
----TATATATCATCCGTATAGCAATCAGATTGGCCTTCAATCGTACGTAGAGAGCTCTCGCAA----CAAGTGCCAACC
CGCCGGCCGGCCCCAAGGAAGATCCATGGAGACGCTGCCGGACGACGTGGTCCTGGAAATCCTGGTACGCATGCCGGATG
CCCCGCACCTGTTCCGCTGCGCGGCGACGTGCAAGCGCTGGTGGTTCCTCGTAGCACAACCATCCTTCCTCCGCCGCCGC
TGGCCAGAGGACACGCACCATCCCTCCTCCCTCCTCGGCTTCTTCGCCGAGGAATATCGATCAGCCGGTCCACGGAGCTA
CAAAATTAGGCATGTGCCGTCCTTTATTCCGGCGCCCTCGTCGCCCTTTCGGCCTCGCAGCCCCATCGCGAGCTTCGCCG
ACGCCGGCGACATGCGGGAATTGCCACTCGCCTCGCGCCGCGGCTTTCTTCTCGTGCATCTCCTCGCCGGCCATCACCGT
CGGGACGCATACAAGGAATTCAACCTGGCCGTGTGCGACCCGCTCAGTGGCACAAGCCGCGTGCTGCCCACGCTCAAGTA
TGACAGGCTTTTCAGGATCAAAGGTTGTGCTATTCTAACCGG------CTGTTGCTCCAAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACCGGTGTTATCAACCTGCTCGGCCTTCTCCAAAGTGTTAATAATTGGCTTCGACAAC
GATGACCAGCAGTACAGTATCTCCATGTTCTCGTCGGATGAGTCGAGCTGGAGGGCGCCTGAAAACTGCTTCGACCCTTC
AGAGCACGGCATTCAGCTGGCGCCTTCACAGGTCAACGCGGTCGTGTGCCAAGGAGCGGCGCACTGGCTCTTCAGGGACA
ATTCAAACTTCTACACGCTGCACGCGAGCGTTGAGACGGGCCATACCACCTTGACGAAGCTCTCGCTCACACTCGGCAGC
CTCGGCCGCAACTTTAGGGACGTACCACGGCTA------AGCGTCACCAACGGAGTGCTATCACTGCTTGCATTACATAA
AAAATGCCTAAGAGCGCAGATATGGACATGTCGAGGTGACAAAAAGAGCAGAGGTTGCACCAGAGACTGGCGCCACACTA
AGATGATCAAGCTAGAACGACCGGAGCAGAATCATACCAAGA---TAGTGCATTACATGTGGGCAGGGGAGAGGAGCGGT
GTATTGCTTATCAAGGCAAGCCCCTACTTCAAACAGTGTGTATATGTTGCTAACCTTCAAACCGGGACAGTGGAGGAGGT
CATCGACAAGTTTTGCGGCGAGTGCACGACGCCTATCCCGTTTGAGATTGATTGGCCAGCCTTCTTCATGTCTCGCTTGG
CAGGCGATAGCATCAATCAGGCTAAATTGGGAGAAACCATACTGAGCATTACCAACCTTCTTGGAGGCCAATAGTTGT-G
CCTATAACTTTCGGTTCAATTAATTGCTATGAGTTGTACCTCCTCCGTTCCTAAATATAAGTCTTTTTAGATATTTCAAA
TAGACTAGAACATACGAATATATGTAGACATATTTTAGAGTGTAGATTCACTCACTTTGCTCCGTATGTAGTCACTTGTT
GGGATCTCTAAGAAGATTTATATTTCAGAACGGAGGGAGTACCTCGTAGGAGCTACATGAGACATAGGTTTTGTAT--GC
ATGGAAGACTTGGTGAACCGGCAACCTTTTTCTTTGCATGCAAAATAAACAAGAATGTACCATGTGCACGTTGGTTAAGA
GGTTTTTCTTGGTCATA----TCAAGCATACGCAATCGGGGTAGTGTATATATTAGTTTGAGGTGCAGAATGTTGTCTCT
GCGATCTTGTTGTCCGATTTAACCCCTGCGTCTTTACTTGGTGAGCTAGACGAGCCTTTGATGTTTTGTCTAGTAATAAG
GTGTCGCATGGCGTTCTGTTATGTGAATCGCCGCTATCTAAAATGGAAGTTTGCAGTTTGTTGTAATTAAATAAAACATT
CATTTGCACCTCTGGCACTATCTTGGTTGCTTAATTAACTTGTTCAATACACTTCCACGAAGTAGATATCAAGGTAAACT
TGTAGAAAATTGTGCTATTTAGCTAGCTCACACGCTAAATGGTCTGCTCATGATCAAATACACAAAGCAAGCAGCACATG
AGTTGAACATGCACTAGGAGAGGATGAGTTAACGGTTCACACCAATGGGAGCGGAGACTCGTCGCTGGACAACGACCTAC
TCGATGGTGATATGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGAATAACCCTGCATGAAAGAACCTTGCAAG
AACCCATTCCTTCCCCACGTTCACGATGAGCCGTAGAACATCTTGCAGCGATGGAGAGGCGTTATCGAAAATGACCGCCT
TCTAGTGCTTCCACATCTCCCAAAGGACTAGCATCGCGAGGGTGTTGAGGTTCTTCCTGTTCCGTTGGCCCGAAGCAAGC
GCCGTGCACCAATGTAACAACCGATCGTCCAGCCCTGGAGACCGGTCCTCCTGACCCAAGGCTGAGAGCACCTGGA
>SNPs
-S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------S--------------SSS----S----S----SS--------------S-----S--
-S-----S-S----S-S----SSS----S----S---S---------S-----SS---S--S-----S---S-S------
--S-SSS-SS--------------SS-S----S-----------------S-S-S-SSS-SS--SSSSSS-SSSS-SSSS
SSS--------SS----S---------SSS-------------------------S--SS--------------------
-S--------S--------S----S------S-------------------S----S-S----SS---S-S--------S
----------S-----S----------S--SS-S---S----------------SSS---S-SS-----S----S-S---
SSS----S--------S----------------------------------------------S-----S----------
-------------------S------------------------------------------------------------
---S--------------S--------S----------------------------------------------------
--------------------------------------SS----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------------------------------S-------------
S----------------------------S----------------S------------S--------------------
--------------------------------------------------------------------------------
----------------------S--------------------------------------------------------S
--------------------------------S-----------------------------------------S-----
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---------------------------------SSSSSS-----------------S-----------------------
S--------------S------------------------------------------------------------S---
--------S---------------------------------------------S-------------------------
--------------------------------------S---------------------------S-------------
----------------S--------------------------------------------------S------S-----
-------------------------------------------------------------S-------------S---S
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S----------S--------------------------------
-------------------------S---S--------------------S-----------------------------
--------------------S-----------------------------------------------------------
-----------S--------------------------------------S-----------------------------
-------------------------------------------------------------------------------S
--------------S-----------------S-----------------------------------------------
------------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
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-------------------------------------------------------------------------S------
----------S----------------------------------------S-------------S------------S-
---S------------------------S----------------------SS------S-------------S--S---
---S-----------------S-------------S----------S---------------SS-----S------
>forward_286
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--------------------------CGATGCCCTAGCTTCCTCTG----------------------------------
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>reverse_1793
--------------------------------------------------------------------------------
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--------------------------------ATCGGATGAGTCGAGCTGGA----------------------------
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>forward_1507
--------------------------------------------------------------------------------
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-----------------------------------------------CTTCTCGTGCATCTCGTCGT-------------
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>reverse_3764
--------------------------------------------------------------------------------
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---GGTGCTTCCACATCTCCCAA---------------------------------------------------------
----------------------------------------------------------------------------
