>input_sequence_49241
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-------------------------------------ATGTCGACAATGGAGGTGACGAAGCCCCGGCAGGTGGTGAGGA
GGTTCCTGGCGCGGCCGCAGCACGAGGGCGCCGGCGCCGTCGTCCGCCGCAGCATCGGCAGGTTCGAGCTGAGGTACTTC
GACCCGTTCCTCGTCCTGGACGAGTTCTCAGGTGAGT---CCCGCCGCAGGGTGCTCTTCCCTTCGTTTGCTTCGGATTT
TCGTTTGGAATCGTCGTTAATGGATCCATTCCTTGTCCGAATTTGCTGCATGCAGCTTCTGCTCCGGCTGGGTTCCCTGA
TCATCCACACCGGGGCTTCGAGACCGTCACCTACATGCTCGAGGTAA----GCATGCATTC-------------------
--------------------------------------------------------------------------------
---------------------------------------CTTATTTAATTCTCATTATT--AAGCTGTAACGGAAGTGGC
ACCTTTGACTACCAAACATGCAACGGAAAACAAGCGCGTTCTGTTTGTCAAACTTAATTGCAACTTTACTGCAAAAAAAA
TTTAATTGC---------------------------AACTTTTCTTGCCCTTCACTCGAAGAAGCTATCTGAACGCGGGT
CCTGCTTTCGGTAGCTTGGCATCGATCTCTCCCTACTACGCCAACCACCCCCTGTGCTTTCGTGGAATGACAACGAAATC
TTCGTTCAAAGATAACTGAAAA--CCGTGTGAAAATTAGAAGTACCAGTAGGAATGTTCACGGGACAACGATGGCGCGGG
G-----AGTAGATTTGTTGGTTAACCGCCCTGACCTGACGACCCTTTCCTCTGGCTGGCTG----CAGGGAGCGGTGACG
CACGAGGACTTCGAGGGCCACCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGCCGCGGCATCGTGCA
CTCCGAGATGCCCGCCGGCCCCGGCACCTCCAAGGGCCTCCAGCTCTGGGTCAACCTCGCATCCAAGAACAAAATGTGAG
CATT-TATTAACTTCACCTTCCTCTCTCCCGCGACGTCACGCGAGCCGTCTGACCGCGTCATGTGCGCCTCGATGACTAA
CACGTGCGAT---CGATCCAGGGTCGAGCCGGGGTACCAGGAGTTCCAGAGCAAGGACATCGCGTCCACCACGTCGGCGG
ACGGCGACGTGACGGTGCGCGTCATCGCGGGGGAGTCCATGGGCGCCCGGTCGCCGGTGCGCACGCGGACTCCGACCATG
TACCTTGACTTCACGGTGCGCCCGCACGCCGCCGCGCCCGTGCGGCAGCCGGTGCCGGCGTCGTGGAACGCGTTCGTGTA
CGTGCTCGAGGGCGAGGGCGTGTTCGGGCCGA---------------------CGGAGCAGCCGGCGGGGGCGCACCACC
TGCTGCTGCTCGGGCAGGGCGGCGACGGCGTGGAGGTTTGGAACAGGTCGGACAAGCCGCTCCGGTTCGTGCTCGTGGCC
GGCGAGCCCATCGGCGAGCCCGTGGCGCAGCTGGGCCCGTTCGTGATGAACACCGAGGAGGAGATCGACGCCACCGTCAA
CGACTTCGAGTACTTCATCAACGGGTTCGAGAAGGCCAAGCATTGGAAGTCGCAGGCGATGATCGCGCTAGAGCTAGAGT
ACGTAGGGTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr5B_1_TraesCS5B01G261100
TTCATCTATTAAGTTATAGACTCATAGTGCTTGGGACATGTGATGTTACGGTAACTAGCTAAGTTATTCAAACTATCTCT
CTTCTCATTAACTCATTGCCACATAAGCAAATTTACTTAGTTGGACTTGATGTTACTGCTGAAATTACTCCCACCGTGGC
TAGTCTTAGCCCCGAGGCGGA-GGGTTAACGTGGTGGCTTTTTCTAGCCTGACAAGTGG-CTCAGCCAGTTAGTTTAGCA
ATCAAAATTGTGGTTTCAGATGTTATGTGAATCATTAAAACAGAAGTTGTGGTTTTGTGTGGAAAAAAAATGTTATACTA
GTAAAAACTGGAATCTCCTCAAGTTACTCAGAAAATATCTCCCGTCACTCAAGAGCCGTGGATGAACCAGC---------
---TGAGGATAATCATGGAGCCGTGGCTTGGAAGAACAAAAAACCCCGTCGACGCCACGACACGCACGACCGTAGGTTTT
CACGTCAAGGCAACATTTTAAC-TTTTGACCATCCGGTAATTAATACT------GTAACAGCGAGGTGACAGGGCAGGTA
---AGATCAAAACCGGGTAACCATATGC--------TGCTGACGCGACGCTGGCACAAGGCAGACGCACGCAGCTCGCAG
AGCGGCGGAGGGA-AGGCGTGCGTGCGCGTGGCGTCAGCGTGACCGGCGGACGGCGACGGCGACATCGAGCTGTCGAACA
CATGAC-TTTTTGGAGCGATGCGCCTCGGGACGGACGGGCTCTTTGTATCAAGATTAAGATAGAAAAGGTCAAGAAACTA
GCTGGGCGATTCGCCACACCTTGGAG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAGAGAGAG-GAGGGAGGAACTG
TCGCTCTCCTTCGGTCCCGGAGACGAGAGGA-----GGTAACGGAATCAAGGCGATCTCGCACCCAAGCCGTGGCGCCCT
ATATAAGAGACCCGCGACGAAGCCGTCGTAGTACTTCCATATCCACAATTCCACACATATTCATCGACACAAAGATTCAT
CGCTCCATTCGCCTTCCTTGCCTGGTGT-------CTATGTCGACAATGGAGGTGACGAAGCCCCGGCAGGTGGTGAGGA
GGTTCCTGGCGCGGCCGCAGCACGAGGGCGCCGGCGCCGTCGTCCGCCGCAGCATCGGCAGGTTCGAGCTGAGGTACTTC
GACCCGTTCCTCGTCCTGGACGAGTTCTCAGGTGAGT---CCCGCCGCAGGGTGCTCTTCCCTTCGTTTGCTTCGGATTT
TCGTTTGGAATCGTCGTTAATGGATCCATTCCTTGTCCGAATTTGCTGCATGCAGCTTCTGCTCCGGCTGGGTTCCCTGA
TCATCCACACCGGGGCTTCGAGACCGTCACCTACATGCTCGAGGTAA----GCATGCATTC-------------------
--------------------------------------------------------------------------------
---------------------------------------CTTATTTAATTCTCATTATT--AAGCTGTAACGGAAGTGGC
ACCTTTGACTACCAAACATGCAACGGAAAACAAGCGCGTTCTGTTTGTCAAACTTAATTGCAACTTTACTGCAAAAAAAA
TTTAATTGC---------------------------AACTTTTCTTGCCCTTCACTCGAAGAAGCTATCTGAACGCGGGT
CCTGCTTTCGGTAGCTTGGCATCGATCTCTCCCTACTACGCCAACCACCCCCTGTGCTTTCGTGGAATGACAACGAAATC
TTCGTTCAAAGATAACTGAAAA--CCGTGTGAAAATTAGAAGTACCAGTAGGAATGTTCACGGGACAACGATGGCGCGGG
G-----AGTAGATTTGTTGGTTAACCGCCCTGACCTGACGACCCTTTCCTCTGGCTGGCTG----CAGGGAGCGGTGACG
CACGAGGACTTCGAGGGCCACCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGCCGCGGCATCGTGCA
CTCCGAGATGCCCGCCGGCCCCGGCACCTCCAAGGGCCTCCAGCTCTGGGTCAACCTCGCATCCAAGAACAAAATGTGAG
CATT-TATTAACTTCACCTTCCTCTCTCCCGCGACGTCACGCGAGCCGTCTGACCGCGTCATGTGCGCCTCGATGACTAA
CACGTGCGAT---CGATCCAGGGTCGAGCCGGGGTACCAGGAGTTCCAGAGCAAGGACATCGCGTCCACCACGTCGGCGG
ACGGCGACGTGACGGTGCGCGTCATCGCGGGGGAGTCCATGGGCGCCCGGTCGCCGGTGCGCACGCGGACTCCGACCATG
TACCTTGACTTCACGGTGCGCCCGCACGCCGCCGCGCCCGTGCGGCAGCCGGTGCCGGCGTCGTGGAACGCGTTCGTGTA
CGTGCTCGAGGGCGAGGGCGTGTTCGGGCCGA---------------------CGGAGCAGCCGGCGGGGGCGCACCACC
TGCTGCTGCTCGGGCAGGGCGGCGACGGCGTGGAGGTTTGGAACAGGTCGGACAAGCCGCTCCGGTTCGTGCTCGTGGCC
GGCGAGCCCATCGGCGAGCCCGTGGCGCAGCTGGGCCCGTTCGTGATGAACACCGAGGAGGAGATCGACGCCACCGTCAA
CGACTTCGAGTACTTCATCAACGGGTTCGAGAAGGCCAAGCATTGGAAGTCGCAGGCGATGATCGCGCTAGAGCTAGAGT
ACGTAGGGTGAAACAAAGAATGGGAGGACAAACTGTGAAGAACGTACTGTGCGCATTTCGTGTACGAGGTTATTTATTTG
TTTATTTATTTCTTTCTTTCATCCCGACATCAGTGATCGCTTTCATGTACATATCCCACAACATAAAGGTACAGTATACT
GATTCTAGAAAAACAGTATACTGAATTATAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AAAACTACTCCTCCCTCCGTTCCTAAATACCACGGATACCTACGTATA
GGGATTTTTTCTAAAAAAAAACCTATGTAGAAGGAAAAAAATTAGATGGATCATATGTCGGACTGTATTTTCTTCGTCAC
GGATACCATGGGCACCCATTCCCCACGAAAGTGAATGCGGGTGTACAACGGGCACCCAGGTT-GATATCCTAAAATTTCA
AAAAAAAAAATCTTCTAATTTTCTGCTATTTTTTT--TGCCGTACTCATACAGGGGTGTGGGGCACCTAAGAGCGGCAAT
GCATTTCCGACTTCAAGAATCATATACTGAATGATAAAGTGGAGTGGCCTTCCTGTGAGCTATTACGCTCAAGTTTGGCT
TTACTGAGAGGTGGGTGGACATACTTATGGGCTTGGTTAAAGCATCTACAGCCGAACTTGGCAAATTCTGTCCTTAAACA
CTCGCGGACGCGCCCTGGTGCATCCGAGGGCACTCACTGGTCATCCATCAAATAATGGCGTCCACATCCGGACACCTCAA
TTACCGTATTTCAAATCCATACAAACTCATGCAACTACGTCACTGCACATA--TCGTCCGGCTACTTCATCACTACCAAA
ACTACTCCCTCTATTTCAAAATAGATGACTCAACTTTGTACTAACTTTAGTACAAAGTTAGTATAAAGTTGAGTCATCTA
TTTTGGAACGGAGGGAGTACATGCCATCGGACTATCAAAATTTGGCCTGTTCGACTATGGTGGAGTTCATCCACGACCGC
CCTTGCCCTTCGCGTCGCCCTTGCCGTCCTTCTCGCGGAAGTACCGGTCGAAGACGC
>chr5D_162
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AGTCTTAGCCCCGAGGCGGA-GGGTTAACGTGGTGGCTTTTTCTAGCCTGACAAGTGG-CCCAGCCAGTTAGTTTAGCA
ATCAAATTTGTGGTTTCAGATGTTATGTGAATCATTAGGACAGAAGTTGTGGTTTTGTGTG--AAAAAAATGTTATACTG
GTAAAAACTGGAATCTCACCAAGTTCCTCAGAAAATATCTGCCGTCACTCAAGAGCCGTGGATGAGCCAGC---------
---TGAGGATAATCATGGAGCCGTGGCTTTGAAGAACAAAAA-CCATGGCGACGCCACGACACGCACGGCCGTTGGTTTC
CACGTCAAGGCAACATTTTTAACTTTTGACCATCCGGTAATTCCAAAGGCCTTAGTAACAGCGAGGTGACAGGACAGTTA
TCAAGATCAAAACCCGCGACGGCCGGTAAACCACGGTGCTGACGCGACGCTGGCACAAGGCAGACGCACGCAGCTCGCGG
AGCGGCGGAGGGAAAGGCGTGCGTGCGCGTGGCGTCAGCGTGACCGGCGGACGGCGACGGCGACATCGAGCTGTCGAACA
CATGAC-TTTTTGGAGCGATGCGCCTCGGGACGGACTCTCTCTATTAAG-AAGATTAAGATAGAAAAGGTCAAGAAACTA
GCTGGGCGATTCGCCACACCTT--AG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAGAGATAT-GAGGGAGGAACTG
TCGCTCTCCTTCGACCCCCGTACCCGGAGGA-----GGCAACGGAATCAAGGCGATTTCGCACCCCGGCCGTGGCGCCCT
ATATAAGAGACCCGCGACGAAGCCGTCGTAGTACTTCCATATCCACAGCTCCATACACATACATCGATCCATTGGCCTGC
CT----------CTGCCTTGCCTGGTGGTATCTAGCTATGTCGACAATGGAGGTGAAGAAGCCCCGGCAGGTGGCGAGGC
GGTTCCTGGCGCGGCCGCAGCACGAGGGCGCCGGCGCCGTCGTCCGCCGCAGCATCGGCAGGTTCGAGCTGAGGTACTTC
GACCCGTTCCTCGTCCTGGACGAGTTCTCAGGTGAGT---CCCGCCGCAGGGTGCTCTTCCCTTCGTTTGCTTCGGATTT
TCGTTTGGAATCGTCGTTAATGGATTCATTCCTTGCCCGAATTTGGTGCATGCAGCTTCTGCGCCGTCTGGGTTCCCCGA
CCATCCGCACCGAGGCTTCGAGACCGTCACCTACATGCTCGAGGTAC----GCATGCATTTCCGTTGCTGTCGATCGCGC
GCACTTTGTTCTTGATGTGCTAGCTAGTAGCACT---AGAAAACTGCCAAATAAACCTAGCTAGCAGCATCAAAGTCCAG
AATATCCACACCAAAATACATTGGCAATACTTCCA---------------------ATT--GAGCTGTAACGGCGGTGGC
AGCTTGGACAACCAAACATGCAACGGGGAACAAGCGCGTTTCATTTGTCAAAC---------------------------
-TTAATTGC---------------------------AACTTTTCTTGCCCTTCACTCGAAGAAGCCATCTGAACGCGGGT
CCTGCTTTCGGTAGCCTGGCATCGATCTCTCCCTAGTACGCCAACCACCCCCTGTGCTTTTGTGCAATGAGAACGAAATC
TTTGTCCAAAGATAACTGAAGAAGCCGTGTGAAATT---AAGTACTGGTAGGAATGTTCACGGGACAACGATGGCGCGCA
TACAGTAGTAGATTTGTTGGCTAACCGCTCTGACCTGACGACCCTTTCCTCTGGCTGGCTGGCTGCAGGGAGCGGTGACG
CACGAGGACTTCGAGGGCCACCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGCCGCGGCATCGTGCA
CTCCGAGATGCCCGCCGGCCCCGGCACCTCCAAGGGCCTCCAGCTCTGGGTCAACCTCGCCTCCAAGAACAAAATGTGAG
CATT-TATTAACTTCACCGTCCTCTCTCCCGCGACGTCACGCGAGCCGTCTGACCGCGTCATGTGCGCCTCCATGACTAA
CACGTGCGCT---CGATCCAGGGTCGAGCCGGGGTACCAGGAGTTCCAGAGCAAGGACATCGCGTCCACGACGTCGGCGG
ACGGCGACGTGACGGTGCGCGTCATCGCGGGGGAGGCCATGGGCGCCCGGTCGCCGGTGCGCACGCGGACGCCGACCATG
TACCTCGACTTCACGGTGCGCCCGCACGCCACCGCGCCCGTGCGGCAGCCGGTGCCGGCCTCGTGGAACGCGTTCGTGTA
CGTGCTCGAGGGCGAGGGCGTGTTCGGGCCGACGG------------------CGGACCAGCCGGCGGGGGCGCACCACC
TGCTGCTGCTCGGGCAGGGCGGCGACGGCGTGGAGGTTTGGAACAGGTCGGACAAGCCGCTCCGGTTCGTGCTCGTCGCC
GGCGAGCCCATCGGGGAGCCCGTGGCGCAGCTGGGCCCATTCGTGATGAACACCGAGGAGGAGATCGACGCCACCGTCAA
CGACTTTGAGTACTTCATCAATGGGTTCGAGAAGGCCAAGCATTGGAAGTCGCAGGCCATGATCGCGCTAGAGCTAGAGT
ACGTAGGGTGAAAGAACGCGGTGAAGCCTG----------------CTGTGCGCATTTCCTGTACGAGGTTATTTATTTG
TTTATTTATTTCTTTCTTTCATCCCGACATCAGTGATCGCTTTCATGTACATATTCCATAACATAAGGGTACAGTATACT
GATTAAAAAAAAACAGTATACCGAATTATACTCCCTCAGTTCCTAAATATAAGTCTTTGTAGAGATTCCACTAGATGGAC
TGCATACGGAGCAAAACGGATGAATCTACACTTAAAATGCATCTATATACATCCGTATGTGGTTCATAGTGTAATCTCTA
CAAAGACTTATATTTAGGAACGGAGGGAGTATAAAACTACTACTCCCTCCGTTCCTAAATACCACGTATTCTTT------
-------------AAAAAAAACCTATGTATAGGGAAAATTTTG-GATGGATCGTATGTCGGATCGTATTTCCTTCGTCAC
GGATACCACATGCACCTATTCCTCACGAAAGTGAATGCGGGTGTACAACGGGCACCCAGGTTTGATATCCTAAAATATCA
GTTTTTATTTTT-----ATTTTCTGCTATTTTTTTAATGCCATACTCATATAGGGGTGTATGGCACATGAGAGCTGCAAT
GCATTTCCGACTTCAAGAATCATATACTGAATGATAAGTTGGAGTGGCCCTCCTGCGAGCTATTATGCTCAAGCTAAGCT
TTACTAAGAGGTGGGTGGACATAGTTATGGGCTTGGTTAGAGCATCTACAGCTGGACTTGGCAAATCTGGCCCTCAAACA
TCCGCGGACGCGTCCGGGCGCATCCGCGGGCACTGACCAGTCATCCCTCAAATAACGGCGTCCACATCCGGACACCTCAA
TTACCGTATCTCTTATCCATACAAACTCATGCAACTACGTTGATGCACGCACGTCGTCCGGCTACTTCATCACTACTAAA
CTAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5A_163
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GTCTTAGCCCCGAGGCGGAGGGGTTAACGTGGTGGCTTTTTCTAGCCTGACAAGTGGGCTCAGCCAGTGAGTTTAGCA
ATCAAATTGTGGTTTTGGATGCC-ATATGGATCATTAGGACAGAAGTTGTGATTTTGTGTA--AAAAATGCTACGGTAAA
AAAAAAAGAGGAATTTCACCAATTTCCTCAGAAAATATCTCCCGTCACTCAAGAGCCGTGGATGAACCAGGAACCAGGTG
AGGTGATGACAATCATGGAGCCGTGGCTTGGAAGAACAAAAA-CCCTGGCGACGCCACGACACGCACGACCGTAGGTTTT
CACGTCAAGGCAACATTTTAACTTTTTGACCATCCGGTAACTTCAGAGGCCTTAATAACAGCGAGGTGACACGACAGTTA
TCAGGATCAAAACCCGCGACGGCCGGTAA-CCATGGTGCTGACGCGACGCTGGCACAAGGCAGACGCACGCAGCTCGCGG
AGCGGCGGAGGAG-AGGCGTGCGTGCGCGTGGCGTCAGCGTGACCGGCGGACGGCGACGGCGACGTCGAGCTGTCGAACA
CATGACTTTTTTGGAGCGATGCGCCTCGGGACGGGCGGGCTTTGT--------ATTAAGATAGGAAAGGTCAAGAAACTA
GCTGGGCGATTCGCCACACCTT--AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAGAGAGGAACTG
TCGCTCTCCTTCGGCCCCGGAGACGAGAGGAGATGAGGTAACGGAATCGAGCCGTGGTGCTACT-------------CCT
ATATAAGAGACCCGCGACGAAGCCGTCGTAGTACTTG--------CATATCCACACGCATACATCGATCCATTCGCCTGC
CTTGCCCGGTGTATGTA-------------------TATGTCGACAATGGAGGTGGCGAAGCCCCGGCAGGTGGCGCGGA
GGTTCCAGGCGCGGCCGCAGCACGAGGGCGCCGGCGCCGTCGTCCGCCGCAGCATCGGCAGGTTCGAGCTGAGGTATTTC
GATCCGTTCCTCGTCCTGGACGAGTTCTCAGGTCAGCCCCCCCGCCGCTTCCTCCTCCTCCCTCGGTTCGTTTCGGCG--
---------ATGGTCGTTAATCGATTCCTTCCTCGTCCGAATTTGCTGCATGCAGCTTCTGCGCCGGCCGGGTTCCCTGA
CCATCCACACCGGGGCTTCGAGACCGTCACCTACATGCTCGAGGTACGCACGCATGCATTTCTGTTGCCGTCGATCGCGC
GCAC-TTGTTCTTGATGTGCTAGCTAGTAGCACTGCTAGAAAACTGCCAAATGAACCTAGCAGTATGAACATCCGCAGAG
CA----CACACCAGAATACATTGCCATCCTGAACCCTTTCTTACTTAAGTCCCATTGCGCAGAGATGTAACGGTAGTGGC
ACCTTTGACGACCAAACATGCAACGGGGAACAAGCGCGTTCCGTTTGTCAAAC---------------------------
-TTAACTGCAACCTGGAACCTTTTTTTGCAACTTGGAACTTTTCTTGCCCTTCACTCAAACAAGCCCTCTGAACGCGGGT
CCTGCTTTTGGTAGCCTGGCATCGATCTCTCCCTAGTACGCCAACCACCCCCTGTGCTTTCGTGCAATGAGAACGAAGTC
TT-------------CTGAAAA--CCGTGTGAAATT---AAGTACTGGTAGGAATGTTCACGGGACAACGATGGCGCGCA
TACACTAGTAGATTTGTTGGCAAACCGCCCTGACCTGACGACCCTTTCCTCTGGCTGGCTGGCTGCAGGGGGCGGTGACG
CACGAGGACTTCGAGGGCCACCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGCCGCGGCATCGTGCA
CTCCGAGATGCCGGCCGGCCCCGGCACCTCCAAGGGCCTCCAGCTCTGGGTCAACCTCGCCTCCAAGAACAAAATGTGCG
CACTCTATTGATTTCACCTTGCTCTCTCCCG-----------------TCTGACCACGTCACGTGCGTCTCGATGACTAA
CACGTGCGATCGACGATCCAGGGTCGAGCCCGGGTACCAGGAGTTCCAGAGCAAGGACATCGCGTCCACCACGTCGGCGG
ACGGCGACGTGACGGTGCGCGTCATCGCGGGGGAGGCCATGGGCGCCCGGTCGCCGGTGCGCACGCGGACGCCGACCATG
TACCTCGACTTCACGGTGCGCCCGCACGCCACCGCGCCCGTGCGGCAGCCGGTGCCGGCCTCGTGGAACGCCTTCGTGTA
CGTGCTCGAGGGCGAGGGCGTGTTCGGGCCGATGACAGACCAGAAGCAGCAGGCGGCGCAGCCGGCGGGGGCGCACCACC
TGCTGTTGTTGGGGCAGGACGGCGACGGCGTGGAGGTTTGGAACAGGTCGGACAAGCCGCTCCGGTTCGTGCTCGTGGCC
GGCGAGCCCATCGGCGAGCCCGTGGCGCAGCTGGGCCCGTTCGTGATGAACACCGAGGAGGAGATCGACGCCACCGTCAA
CGACTTCGAGTACTTCATCAACGGGTTCGAGAAGGCCAAGCATTGGAAGTCGCAGGCCATGATCGCGCTAGAGCTAGAAT
ACGTAGGGTGAAGGAAAGAATGGGAGGACAAACTGTGAAGAACGTACTGTGCGC------------AGGTTATTTATTTG
TTTATTTATTTCTTTCTTTCATCCCGACATCAGTGATTGCTTTCATGTACATATTCCATAACATAAAGGTACAGTATACT
GATTCTAAAAAAACAGTATACTGAATTATACTC-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CTACTACTCCCCCTCCGTT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-------------------------------------------------------------------------------
------S------------------------------SS----------------------SS-----------------
-----------------SS------S------------------------------------------------------
------------------------------------------S---S-S-------------------------------
------------------------------------------SSS-SS-------------------------S---S--
--------------S-SS-SSSSSSSSS--------------------------------------------------S-
--------------------------------------------------------------------------------
-------------------------------------------S-SS-SS------------------------------
----------------------SS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------S--------SS-------------
-----------------------------------------------SS--------S--S------SS--SS-SSSSSS
-SSS--SSSS-S--S------------S----------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------S-----------------
S---------------------------------------------S-------------S-------------------
--------------------------------------------------------------------------------
-------------------------------------------S----S--S---------S-----------S------
---------S----------------SS-------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSS
S----------------------------------------------------------------S--------------
---------------S-------------------S----------------------------S-----S---------
--S--S----------------------------S-SSS------SS-------------------------------SS
S-------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------------------------------S---------
-----S------------------------S----------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-------------S---------------------------------------------S--------------------
------------------------------------------------------S---S---------------------
-------S----------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------------------------S--S-S-SSSSSSS
SSSSSSSSSSSSS----------------S-S------SSS-SS--------S---------SS------S---------
--------SSS-----S-----S-----------------------------------------------------S---
SSSSSS-SSS-SSSSSS------------------------S--------S--------SS-----S-S-----S-----
-------------------------------------SS----------S-----S---------S-------S-SS---
-----S-----------------S---------------S------------S-S-----------SSS-S---S-----
SS----------S--S--S-------S-------S--SS-------S--------S------------------------
---------S--SS--------------------------SSS-----SS--------------------------S---
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1455
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TTCAT
CGCTCCATTCGCCTT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3829
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AAGAGCGGCAAT
GCATTTCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
