>input_sequence_49233
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----------ATGGCCGGTGTCCAAGAAGTATTCCGTGGCGACGT---CCGGCGACAGCACGCGC------GTCGGGTGC
TAGTCTTCCCGCTGCCGTTCCAGGGCCACATCAACCCGATGCTGCAGCTCGCCGACGTGCTCCACGGCCGAGGCCTCGCC
GTCACCGTCCTCCACACCCAGTTCAACGCGCTGGACCCCGCGCTCCACCCCGAGTTCACCTTCGTCGCCGTGCCCGACGG
CATCCCCGCCGACGTCGCCGCCTCGGGGAGCATCATCCCCATCATCCTCGCCATGAACGCCGCCATGGAGGCGTCGCTGG
CCGTCCGCGATGTGCTCGCGTCCGTCCTCGCGGACGACGGCC------AGCCCCCCGCCGCGTGCCTGTTCATCGACGCC
AACCTCCTCGCCGTGCAGAAGGCCGCCTCGGCGCTCGGGCTCCCGACGATGGTGCTGCGTACCGGCAGCGCCGCCTGCTT
CAGCTGCTTCCTAGCCTATCCCATGCTCCACCACAACGGTTATCTACCTCCAAAAGGTCAGTAAA------------GCC
AAT-----------------------------------------------------------------------------
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-------------------------------------------ATAGTTACTCCATGCATGTTAGGATGAGATCTGC---
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------------------------------------------------ACCTGATCATGTATTGTGATCCAT----GCAT
GTTCTGCACCTTAAGCT---------------------------------------------------------------
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-----------------------------------------------------------------TTTGCTGATTGAATG
TTATTGTG----------------------ATCCATG-------------------------------------------
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--------------------------------------------TGTTTCAGAATCACAGCTCTACACACCGGTGAAAGA
GCTGCCGCCGCTGCGTGTCAGGGACCTATTCCGCACGAGCAGCAGAGACCACGAAATGGTGCGCAAGGTTCTAGCCCGAG
CCTCTGAAACCGTGAGGAACTCCTCCGGCCTCGTCGTCAACACGTCCGACGCTCTGGAGACCGCCGAGCTGGACAGGATA
CGCCGCGAACTGGACGTGGCCTTCGTGCTCGCCGCCGGCCCGCTCCACAAGCTCTCCTCCCGGAGCACCGGGAGCAGCCT
GCTGCGCGAGGACCGTAGCTGCATGGAATGGCTGGACAAGCAGGTCGCGGGGTCCGTGCTGTACGTGAGCTTCGGGAGCT
TGGCATCCATGGATGGCGTCGAGCTCTCGGAGGTCGCGTGGGGACTGGCCAACAGCGGCCACCCTTTTCTCTGGGTTGTC
CGACGGGACCTCGTGCCGGGATCGGACGGACCAGGCCTGCCGGAGGGGTTTGATCGTGCGGTGGAGGGCAGAGGCAAGGT
GATCCCGTGGGCCCCGCAGCAGGAGGTGCTGGCCCACTTTGCAGTGGGTGGGTTCTGGACCCACAACGGCTGGAACTCGA
CATTGGAGAGCATCAGCGAGGGTCTCCCAATGATCTGCATGCCTCACTTTGCGGATCAAATGATGAACACAAGATATGTG
GAGGCAGTATGGGGTGTAGGGTTTGAGCTCGAGGGCAAGCCAGAGAGAAACAAAATCACGGGGGCAATTCAGAAGCTTAT
GAATGAGAGGGAAGGGGAAGTGGCTAGGAAAAA---AGCAAGAGAACTTCAGAAAAACGTAGCGTCGTGCTTGGAAACTG
GTGGGTCTTCTTTACTGGCTATTGATAAACTTGTCGAGCATATATCGTCTTTGTAA------------------------
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>chr4B_1_TraesCS4B01G070700
CATAGCACCAATGGAGACATACCTTCCCC-TCCCGGGAG-----CGGTCTCGTCTCTTCTCATCATCCGG--CTGGATTG
AGACAAAGATGGTAGTGCCCGGGAACCTCACGGCAAGTCCGGCGGCCACTGCCATCCGACACGGTGTCGCGGAGCAATAT
CCTCTCATCGTGGTCGTCGCCGGTCGCCCAAACCCCAAGTCCAAGTC-------------GCACGCGGATGAATCAATAT
TTCTAGTATATATAAAGATAGGGATGATTTTAGAAGGTTGGCTTTGGACATGGGAGTTAGAACAAGGAGGGTGTGGTCTA
TGGTTAAAGGAAAGGCCATGCCGCGGATCACTGACCTGGCACAAGACAGACCGCATATCAGTGAGGTGGCGCAAGCCAGG
GCACCCTGGCTAGGGTCGGCATTGGACGTGGCTGCCCTCTACACAACGCAAGAGGAAGCGGCGCGGCTCCTCCGCAAGCG
GCAGGCGGCTGC-------------CGAGCCCCCATGCCCTTCTGCCGCTAGAAGCACTACTCCAACGATGACAACATGG
ATGAAGACGGCGGTGCCACTGGCCAGGCAACCACGCGTACGTGGTCATCATCCGCTCCAAGATAGTTTTGTTTTAAGTTT
TAGTTAAACGGATGAAATATCGTTTTATGTCCAAACTTAAGTTTATTCCATCGTGT--GCATGAAATTCATCATGCTTGT
CCAAATCCGATTTGAATTGCACGAGGACATGGTTGGATGGCCGGCTTTCGT--ATCACTGTGCGTCGACGAGTGTCCATT
TTTTCGCTTCATCTTTCCCCTTCCGTATCACTGTAGCATGGTGCGGTGCAGCCACTGCTTTTTCCTTACGGTAGGTGATC
ACTCCACAGTCCGCACCAACTCCCCTCCCGTGTTTAAGAAGTCAGAACATGT--------GTGTACGAACTAAGAAGTGA
GAACTGTGAGTGTTTATAAAAACTCATGGAGATTTTGGCGATTCCAGCTTGCTAAGAT----CGGATCAAACAGCCCGAG
CATCAGCAAAATGGCCGGTGTCCAAGAAGTATTCCGTGGCGACGT---CCGGCGACAGCACGCGC------GTCGGGTGC
TAGTCTTCCCGCTGCCGTTCCAGGGCCACATCAACCCGATGCTGCAGCTCGCCGACGTGCTCCACGGCCGAGGCCTCGCC
GTCACCGTCCTCCACACCCAGTTCAACGCGCTGGACCCCGCGCTCCACCCCGAGTTCACCTTCGTCGCCGTGCCCGACGG
CATCCCCGCCGACGTCGCCGCCTCGGGGAGCATCATCCCCATCATCCTCGCCATGAACGCCGCCATGGAGGCGTCGCTGG
CCGTCCGCGATGTGCTCGCGTCCGTCCTCGCGGACGACGGCC------AGCCCCCCGCCGCGTGCCTGTTCATCGACGCC
AACCTCCTCGCCGTGCAGAAGGCCGCCTCGGCGCTCGGGCTCCCGACGATGGTGCTGCGTACCGGCAGCGCCGCCTGCTT
CAGCTGCTTCCTAGCCTATCCCATGCTCCACCACAACGGTTATCTACCTCCAAAAGGTCAGTAAA------------GCC
AAT-----------------------------------------------------------------------------
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-------------------------------------------ATAGTTACTCCATGCATGTTAGGATGAGATCTGC---
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------------------------------------------------ACCTGATCATGTATTGTGATCCAT----GCAT
GTTCTGCACCTTAAGCT---------------------------------------------------------------
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-----------------------------------------------------------------TTTGCTGATTGAATG
TTATTGTG----------------------ATCCATG-------------------------------------------
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--------------------------------------------TGTTTCAGAATCACAGCTCTACACACCGGTGAAAGA
GCTGCCGCCGCTGCGTGTCAGGGACCTATTCCGCACGAGCAGCAGAGACCACGAAATGGTGCGCAAGGTTCTAGCCCGAG
CCTCTGAAACCGTGAGGAACTCCTCCGGCCTCGTCGTCAACACGTCCGACGCTCTGGAGACCGCCGAGCTGGACAGGATA
CGCCGCGAACTGGACGTGGCCTTCGTGCTCGCCGCCGGCCCGCTCCACAAGCTCTCCTCCCGGAGCACCGGGAGCAGCCT
GCTGCGCGAGGACCGTAGCTGCATGGAATGGCTGGACAAGCAGGTCGCGGGGTCCGTGCTGTACGTGAGCTTCGGGAGCT
TGGCATCCATGGATGGCGTCGAGCTCTCGGAGGTCGCGTGGGGACTGGCCAACAGCGGCCACCCTTTTCTCTGGGTTGTC
CGACGGGACCTCGTGCCGGGATCGGACGGACCAGGCCTGCCGGAGGGGTTTGATCGTGCGGTGGAGGGCAGAGGCAAGGT
GATCCCGTGGGCCCCGCAGCAGGAGGTGCTGGCCCACTTTGCAGTGGGTGGGTTCTGGACCCACAACGGCTGGAACTCGA
CATTGGAGAGCATCAGCGAGGGTCTCCCAATGATCTGCATGCCTCACTTTGCGGATCAAATGATGAACACAAGATATGTG
GAGGCAGTATGGGGTGTAGGGTTTGAGCTCGAGGGCAAGCCAGAGAGAAACAAAATCACGGGGGCAATTCAGAAGCTTAT
GAATGAGAGGGAAGGGGAAGTGGCTAGGAAAAA---AGCAAGAGAACTTCAGAAAAACGTAGCGTCGTGCTTGGAAACTG
GTGGGTCTTCTTTACTGGCTATTGATAAACTTGTCGAGCATATATCGTCTTTGTAATATTTTGTGTTGTGTTGATGTATG
AAATAATGTATCTTCTTTACCGGCTATTGATAGACTTATCAAGCATATATCGTCTTTGTAATATGTTGTGTTGTGTTGAT
GTATGAAATACTGTATCTTCTTTACCGGCTATTGATAGACTTATCGAGCATGTATCGTCTTTGTAATATTTTGTGTTGTG
TTGGTGTATGAAATACTGCATTATAACTTGTAAGTGGATAGTTGGTGTTACTAGCATTGATGTATCACAATATTTTCCAC
ATTTTTAAAGCAACTTTGTTTGCATGCGCCAAAACACAAAATCTAAGACTTTTTTGTGAGTTGAACTTTCATTAATTAGA
TGGGATCATTACAGTCACAAGGGCTTGACTTGTGCACGTGTCATACGAATCCACACTGCAACTTTTGGTAGGGTGCGGCC
CATCTGAGCTAGTCTGTGGTTTACATGGTTCTGCTCACTACTCACATAGCAAATTCCCTACCTAGCCATAGTAAACGCTT
TGTCTCACCAACAAGGGATGCTACCTGAGATCTATTGGGGGCTAGGTAGGCTATCATGTTGGGGAAGGCGGCAATTTCGA
AAAAAATCCTACGATCACGCAAGATCTATCTAGGTGATGCATAGCAACGAGAGGGGAGAGTGTGTCCACGTACCCTCGTA
GACCGAAAGCAGAAGCGTTTCAATAACGCGCTTGATGTAGTCGAACGTCTTCGTGATCCAACCGATCCAAGTACCGAATG
TACGGCTCCTCCGTGTTCAGCACACGTTCAGCTCGATGACGTCCCTCGTGCTCTTGATCCAGTTGAGGACGAGGGTGAGT
TTCGTCAGCACAACGGCATGGTGACGGTGATGGTGATGTTACCGGCGCAGGGCTTCGCCTAAGCACTGTGATGGTATGAT
CGAGGTGTGTAACGGTGGAGGAGGGCACCGCACACGATTGGGAGAGAAACTTGTGTGTTCTAGGGTGGCCCCTGCCCCCG
TATATAAAGGAGCAAG
>chr4B_1
CATAGCACCAACGAAGACGTACCTTCCCC-TAACTGTTGAGGGACGGCCTCGTCTCCTCTCATCGTCCGG--CTGGATTG
AGACGAAGATGGTAGTGCCCGGGAACCTCATGGCAAGTCCGGAGGCCACCGCCATCTGACACGGTGTCACGGAGCGGCGT
CCTCTCATCGTTGCCGCAGTCGATCGTCCAAGCCCCAAGTCCAAATCGCACACACACCTTGCACGCGGATGGATCGCTAT
TACTAGTATATATAGAGATAGAGATGATTTTAGAAGGTTAGTTTTGGACATGGGAGTTAGAACAAGGAGGGTGTGGTCTA
TGGCCAAAGGAAAGACCGTGCCGCGGATCAGTGACCTCGCACAAGACAGATCGTGGATCAGTGAGGTGGCACAAGCCAGG
GCACCCCGGCT-GGGTCGGCATTGGACGAGGCGGCCCTCTGCACAACGCAGGATGAAGTGGTGCGGCTCCTCCACGAGCG
GTAGGCGGCTGCGGGATAGGGCTC-CGAGCCCCCATGCCCTTCCGTCGCTAGAAGCACTACTCCAACGATGACAACACGG
ATGAAGACGGCGGTGCGACTGGCCAGACAGCCACGCGTACGAGGTCATCGTCCGCTCCAAGATAGTTTT-CTTTAAGTTT
CAGTTAAACGGCCGAAATATCATCTTATGTCCAAACTTAAGTTTATTCCGTCATGTTTGCATTAAATTCATCATGCTTGT
TCAAATCCGACTTGAATTGCACGAGGACATGGTTTGATGGCCGGCTTCCGT--ATTACTGTTCACCAACAAGTGTCCATT
TTTTCGCTTCATCTTTCCTCTTCTGTATCACTGTAGCATGGTGGGATGCAGCCACTAA-TTTCCCTTACGGTAGGTGATC
ACTCCACAGTCCGCACCAACTCCCCTCCCGTGTTTAAGAAGTCAGAACATGCATGTGTACGTGTAAGAACTAAGAA----
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>chr4A_1
CATAGCACCAATGGAGACGTACATAAGGTGTCGCGGGAG-----CGGTCTCGTCTCCTCTCATTGTCCGGCTCTGGATTG
AGACGAAGATGGCAGTGCCCGGGAACCTCACGACAAGT-CGGCGGCCACCGCCATCCGACACGGTGTCATGGAGCGACGT
CCTCTCATCGTTGCCGTCGCCGGTCGCCCAAGCCCCAAGTCCAAGTCGTGCGCATAGCCTGCACGCGGATGCATCGCTAT
TACTAGTATATATAGAGATAGAGATGATTTTAGAAGGTTGGTTTTGGGCATGGGAGTTAGAACAAGGAGGGTGTGATCTA
TGGCCAAAGGAAAGGCCGTGCCGTGAATCAGTGACCTGGCACAAGAGAGACCACAAATCAGTGAGGTGGCACAAGCCAGG
GCACCCTGACTAGGGTCGGCATTGGACGAGGCGGCCCTCTGCACAACGCAGGATGAAGCGGTGCGGCTCCTCCACGAGCG
GCAAGCGGATGCCGGACAGGGTTA-------CCCATGCCCTTGCGCCGCTAGAAGCACTACTCCAACGATGACAGCA-GG
ATGAAGACCGCGGTGCCACTGGCCAGGCAGCCACGCGTACGAGGTCATCGTCCGCTCCAAGATAGTTTT-TTTTAAGTT-
------------TGAAATATCATTTTATGTCCAAACATAAGTTTATTCTGTTGTGTTTGCATAAAATTCATCATGCTTGT
TCAAATTCGATTTGAATTGCATGGGGACATGGTTGGATCGTCGACTTCCGTGTATCACTATCCGCGGACAAGTGTTTATT
TTTTC-CTTCATCTTTCCCCTT-TGTATCACTGTAGCGTGGTGTGGTGCA----CTCC-TTTCCCTTACGGTA-GTGATC
ACTCCGCAGTCCCCACCAACTCCCCTCCCGTGTTTAAGAAGTCAGAACATGT--------GTGTAAGAACTAAGAAGTGA
GAACTGTGAGTGTTTATAAAAACCCATGGAGATTTTGGCAATCCCAGCTTGCTAAGATTGACCGGATCAAACAGCCCGAG
CATCAGAAAAATGGCCGGCGTCCAAGAAGCATCCCATGGCGACGT---CCGGCGACAGCACGCGC------GCCGGGTGC
TAGTGTTCCCACTGCCGTTCCAGGGCCACATCAACCCGATGCTGCAGCTCGCCGACGTGCTCCACGGCCGAGGCCTCGCC
GTCACCGTCCTCCACACCCAGTTCAACGCGCTGGACCCCGCGCTCCACCCCGAGTTCACCTTCGTCGCCGTGCCCGACGG
CGTCCCCGCCGACCTCGCCGCCTCGGGGAGCATCATCCCCATCATCCTCGCCATGAACGCCGCCATGGAGGCGTCGGCGG
CCGTCCACGATGTGCTCGCGTCGGTCCTCGCGGACGACGGTC------AGCCCCCCGCCGCGTGCCTGTTCATCGACGCC
AACCTACTCGCCGTCCATAAGGCCGCCTCGGCGCTCGGGCTCCCGACGATGGTGCTGCGTACCGGCAGCGCCGCCTGCTT
CAGCTGCTTCCTAGCCTATCCCATGCTCCACCACAACGGTTATCTACCTCCAAAAGGTCAGTA-----------------
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-----------------------------------------------------CGTAA---TTAGGATGAGATCTGC---
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------------------------------------------------GCC-------------------------GCAT
GTTCTGCACCTTGAGAT---------------------------------------------------------------
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-----------------------------------------------------------------TTTGCTGATTGAATG
TTATGTTAATCTTCTACAGTATATAAAAATATCCATC-------------------------------------------
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--------------------------------------------TGTTTCAGAATCACAGCTCTACACGCCGGTGAAAGA
GCTGCCGCCGTTGCGTGTCAGGGACCTATTCGTCACGAGCAGCAGCGACCACGAAATGGTGCGCAAGGTTCTAGCCCGAG
CCTCTGAAACCGTGAGGAACTCCTCTGGCCTCGTCGTCAACACGTTCGACGCTCTGGAGACCGCCGAGCTAGACAGGATA
CGCCGCCAAGTAGACGTGGCCTTCGTGCTCGCCGCCGGCCCGCTCCACAAGCTCTCCCCCCGGAGCACCGGGAGCAGCCT
GCTGCGCGAGGACCGTAGCTGCATGGAGTGGCTGGACAAGCAGGCCGCGGGGTCCGTGCTGTATGTGAGCTTCGGGAGCT
TGGCATCCATGGATGGTGGCGAGCTCTCGGAGATCGCGTGGGGTTTGGCCAACAGTGGCCAACCTTTTCTATGGGTTGTC
CGACGGGACCTCGTGCCGGGATCGGACGGGCCTGGTCTGCCGGAGGGATTTGATCGTGCGGTGGAGGGTAGAGGCAAGGT
GATCCCGTGGGCCCCGCAGCAGGAGGTGCTGGCCCACTTTGCAGTGGCTGGATTCTGGACCCACAACGGCTGGAACTCAA
CACTGGAGAGCATCAGTGAGGGTCTCCCGATGATATGCATGCCTCACTTTGCGGATCAAATGATGAACACAAGATATGTG
GAGGCAGTGTGGGGTGTAGGGTTTGAGCTCGAGGGCAAGCCAGAGAGAAACAAAATCGCCAAGGCAATTCAGAAGCTTAT
GAATGAGAGGGAAGGAGAAGTGGCTAGGGGAAA---AGCAAGAGAACTTAAGAAAAAAGTAGGGTCGAGCTTGGAAAATG
GTGGGTCTTCTCTACTAGCTATAGATAAGCTTATCGAGCATATATCGTCTTTGTAATTATTTGTGTTGTGTCGTTATTTG
AAATA---------------------------------------------------------------------------
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----------------
>chr4D_34
----------------------------------GGGAG-----CGGTCTCGTCTCCTCTCATTGTCCGG--ATGGATTG
AGACGAAGATGGTAGTGCCCGGGAACCTCATGGCAAGTCCGGCGGCCACCGCCATCCGACACGGTGTCGCGGAGCGGCAT
CCTCTCATCATTGCCGTCGCCGGTCGTCCAAGCCCCAAGTCCAAGTTGCATGCACACCCTGCACGTGGATGGATCGCTAT
TACTAGTATATATAGAGACAGAGATGATTTTAAAATGTTGGTTTTGTACATGGGAGTTAGAACAAGGAGGGTGTGGTCTA
TGGCCAAAGG-AAGGCCGTGCCGCGGATCAGTGACCTGGCACAAGACAGGCCGCGGATCAGTGAGGTGGCACTAGCCAGG
GCACCCCGGCTAGGGTCTGCATTGGATGAGGCGGCCCTCTGCACAATGCAGAAGGAAGCGGTGCGGCTCCTCCGCGAGCG
GCAGGCGGCTGCCGGGCAGGGCTGTCGAGCCCCCATGCCCTTCCGCCGCTAGAAGCACTACTCCAACGATGACAACATGG
ATGAAGACGGCGGTGCCACTGGCCAGGCAGCCACGCGTACGAGATCATCATCCGCTCCAAGATAGTTTT-TTTTATGTTT
TAGTTAAACAGATGACATATCATTTTATGTCCAAACTTAGGTTTATTCCGTCATGTTTGTATGAAATTCATCATGCTTGT
TCAAATCCGATTTGAATTGCACGAGGACATGGTTGGATGGCCGGCTTTCTT--ATTGCTGTCGGCCGACAAGTGTCCATT
TTTTCGCTTCATCTTTCCCCTTCCGTATAACTGTAGCATGGTGGGGTGTAGCCACTAC-TTTCCCTTATGGTAGGTGATC
ACTCCACAGTCCACACCAACTCCCCTCCCGTGTTTAAGAAGTCAGAACATGT--------GTGTAAGAACTAAGAAGTGA
GAACTGCGAGTGTTTATAAAAACCCATGGAGATTTTGGCAGTTCCAGCTTGCTAAGAT----CGGATCAAACCGCCCGAG
CATCAGCAAAATGGCCGGCGTCCAAGAAGCATCCCGTGGCGACGTTAGCCGGCGACAACACGCGCGC---CGCCGGGTGC
TAGTGTTCCCGCTGCCGTTCCAGGGTCACATCAACCCGATGCTGCAGCTCGCCGATGTGCTCCACGGCCGGGGCCTCGCC
GTCACCGTCCTCCACACCCAGTTCAACGCGCTGGACCCCGCGCTCCACCCTGAGTTCACCTTCGTCGCGGTGCCCGACGG
CGTCCCCGCCGACGTCGCCGCCTCGGGGAGCATCATCCCCATCATCCTCGCCATGAACGCCGCCATGGAGGCGTCGCCGG
CCGTCCGCGACGTCCTCGCGTCGGTCCTCGCGGACGACGGTC------AGCCCCCCGCCGCGTGCCTGTTCATCGACGCC
AACCTCCTCGCCGTGCAGAAGGCCGCCTCGGCACTCGGGCTCCCCACGATGGTGCTGCGTACCGGCAGCGCCGCCTGCTT
CAGCTGCTTCCTGGCCTATCCTATGCTCCACCACAACGGTTATCTACCTCCAAAAGGTCAGTAAACAAATACGTACAGCC
AAT-----------------------------------------------------------------------------
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-------------------------------------------ATAATCACCACGTAA---TTAGGATGAGATCTGC---
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------------------------------------------------GCCTAATCATGTATTGTGATCCATGCATGCAT
GGTCTGCACCTTGAGAT---------------------------------------------------------------
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-----------------------------------------------------------------TTTGCTGATTGTTTG
TTATGTCAATCTTCT-----ATATAAAAATATCCATG-------------------------------------------
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--------------------------------------------TGTTTCAGAATCACAGCTCTACACGCCGGTGAAAGA
GCTGCCGCCGCTGCGTGTCAGGGACCTGTTCCGCACGAGCACCAGCGACCACAAAATGGTGCGCAAAGTTCTAGCCCGAG
CCTCTGAAACCGTGAGGAACTCCTTCGGACTCGTCGTCAACACGTTCGACGCTCTGGAGACCGCTGAACTGGACAGGATA
CGCCGCGAACTGGACGTGGCCTTCGTGCTCGCCGCCGGCCCGCTCCACAAGCTCTCCTCCCGGAGCACCGGGAGCAGCCT
GCTGCGCGAGGACCGTAGCTGCATGGAGTGGTTGGACAAGCAGGTCCCGGGGTCCGTGCTGTATGTGAGCTTCGGGAGCT
TGGCATCCATGGATGGCGGCGAGCTCTCGGAGATCGCGTGGGGTTTGGCCAACAGTGGCCAACCTTTTCTGTGGGTTGTC
CGCCGTGACCTCGTGCGGGGATCCGACGGGCCAGGCCTGCCGGAAGGATTTGATCGTGCGGTGGAGGGCAGAGGCAAGGT
GATCCCGTGGGCCCCGCAGCAGGAGGTGCTGGCCCACTTTGCAGTGGGTGGGTTCTGGACCCACAACGGCTGGAACTCGA
CACTGGAGAGCATCAGTGAGGGTCTCCCGATGATCTGCATGCCTCACTTTGCGGATCAAATGATGAACACAAGGTACGTG
GAGGCAGTGTGGGGCGTAGGGTTTGAGCTCGAGGGCAAGCCAGAGAGAAACAAAATCGCCAAGGCAATTCAAAAGCTTAT
GAATGAGAGGGAAGGAGAAGTGGCTAGGGAAAA---AGCAAGAGAACTTAAGAAAAAAGTAGTGTCGTGCTTGAAAAGTG
GTGGGTCTTCTCTGCTAGCTATTGATAAACTTGTCGAGCATATATCGTCTTTGTAAT-ATTTGTGTTGTGTTGATGTATG
AAATACTATAT---------------------------------------------------------------------
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>chr7D_1028
GGCGACG-------------------------------------------------------------------------
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-----------------------------------------------GCCGGCGGCCGCATGCGCGCGCACGCCGAGTAC
TGATGTTCCCGCTGCCATTCCAGGGCCACATCAACCCGATGCTGCAGCTCGCCGACGTGCTCCACGGCCGCGGCCTGGCC
GTCACCATCCTCCACT------------------ACACCGGGTTCCACAACCACAACACGCTCCGCCCCGCT---GACGG
TGTCCCCGCTGACGTCCTCGCGTCAGGGAACGTCATCGCTATGATCGTCGCCATGAACACAGCCATGGAGGCGTCCGTGG
CCTTCCGCGACGTCCTCGCGGCGGAGTCGATGCTCGCCGGCGAGGGGAAGCCCCGCGCCGCGTGCCTGGTCATCGACTCC
AACCTCTTCGGCGCGCAGAAGGCGGCCGAGGAGCTCGGGCTGCCGACGATAGCGCTCCGGCCCGGCAGCGCAGCCTGCTT
CAACTGCTTCCTTGCCTATCCCATGCTCCACCAAAACGGCTATCTGCCCCCCAAAGGTCAGTTACTCCTACTCGGTACTA
AACACAATTCTCGGGACATGGAGTTTTTTATCCCAACTCACACGCACCTTGGTGAACAGTAAACTAAAAAAGTAAAAAAA
AATGATAAACATTAATAAATTATTCACCTGCGGACAAAATTTTGTGATAAATAACATTCATAGAGGTCTGAGCAAAAAAA
GAAGATGCTTCAACAGGTTATTGTTGGAAGCATTTTGAAGAGTCGATTTCGTATTTTTGCCCGGACGTCCACCATTGTCG
TTTCATCACAAAATTTTGCACGCACTTGAAACCTGAAACATTCATCAATGTTTACAAGAAAAAACAGAATTTTTAATAAT
TTTATTGAATTTTATCGTTCATCAAGAAGGATGTGAGCTCAAGATCAAAAGAGTGTTTTGCCAATTCTCGTGGCTAATCT
CCCTTTATTTACGATAGAGTATTCCTTCCGAATGCTTAACAAACATAGAAAAAATAATTATTCGCTCAAGATTTTTTTTT
TGTGAATGCTTAAATATATGTAAAATGGAGCCATAAAAAAATTACGATTTTTTCGCTCAGTATGTGAATTTTAAAATTTT
GTGGGTTTTTTCAATCATCGGACCCACCCATCATAACTGTTATCAATCGTGCTCTTTTTATCACCCCCGAAACCATATAA
AATTTGTAATTTTCAAATTTATTTTGGACAAATCAATGAATTTTTTATTTAAATTTAGCTATATTTGAATTTGAATAATT
TGATAAATTGTTATTTTGCCTGTAATCTAAATTGGGCTTCGTTCCGTAGAACTGAAATACAGCTGAAGCAAGAGAGAGTA
GAAGTACCACTAGTCTACCCGAACGAGCTTTGTAACAATGGTGGATTCCTCCTTCTTTTATAATTTTTATAAGAACAATG
CTAAATGCTGATATTTTTTGAACAAAACACAAATATTTCACTCACCCTCAAAATTCTTAAATTTTGTCGGAACTCCCAAA
TGCCTACACCGGTAGTTGATGTTCTTTGCAAGAAACGCGAAGAATAGGTACTCCTATCACGCTAGTGTTCTTCCTTCTGC
AGCACGTAGGACAAACTAAGGATTTATTTTTTGTAGAATAGTAGATTTCCTTTTCCAACACTGCTAACTGTACTGTAGCT
TAGAAAAATTGGTCTCTTGCTAGTTAACTAGAATGAGACACTTGACCAAAGATCGATGTGCATCCTTGCTGCCAAGCAGC
TGTCTTAATATCGGAATAGGAATCCTACTTGTACGTAATAGTTCTTAAAAAAAAAACGTTCTAAATGACGGTTTAAACTG
AACTGTCAAAACGTTTAATATTTCGAAAAGTCTAACGCCCACACGTGTGGGCATCTGGCAACTCGCCACACGCATGGATC
CTCGTCCAACCAATTCTGCACGAATTTTGGCGCGTTCTAGCAGTTTTTGTGTGCCACGTAGGACTAAGCTGGTGTGTGGC
ATTCATCCGGTCGCCCACACGTCCTTTTTTCACCACACGGGGGCTGGTGTGTGGGCGTTTAGCAATTCGCCAACACACTA
GTTTCATGCACGCAGAGGGGGCTGGTGTGTGGGCGTTTATCACTTCGCCCACACGCCCGTCTCCTAACCCACACCCAAAG
CTGGCAGTTGCCATGTATTTCTGCAGGTACATGGCAACTGCCCTAACTCTGCTTGTAAGCAGATGGCAACTCTTTTTACC
CGAGTTGCCATGTGTTTTTGCATGATACATGACAACTGCCGTAGCGTGCACGTAAGCAAATGGCAACTCTTTCTTTTACA
TGGCAACTGCCGTAGCGTGCTTGTGAGCACATGGCAACTCTCTCTTTTACCTGAACATGTTTTTTTGCCATGCCTTTTTG
TAGTGCTACATGGCAACTGCCTAGTGTTTAGTGGGTGGCAACTCCTAAAGTTTTGAAATCATGGCAACTGCAGTAGATCA
GACCATACATGGCAACTGCAGTTGAGCAACCATGGCAACTGTAGTTGTCCGACATGACAACCGAAGTTCAGCGACATGGC
AACTGCAGTTAAACGAACATGGACGAGGGTCTGGACCATGGTAACTGCGGGACGCGCGGTGACTGTCACGCGGGCGTGCG
GGACCACGAGGTACGAGGCCTGACGTACGGGACGTGTGGGCGTTATCTATTTCGCCCACACGCACGCGTGTGAGAGGGAT
CGGGAGGGGAAAAAAGAGGTGTGTGGGCATTATTTTTTTGCCCACACGTGGGTGTGTGGGCAATTCCTTTTATACACCAC
ACAAAATGTGTGGGCAGCTCCCTAAACGCCCACACGTGTGGCAGTTATCGACGTCCTAATATTTAGGAGCAAAGGAAGTA
TGTACTACTCTTTCATCTCCAAAAAGAATGGCTATAAGTTTTATCTTGTGTCAAACGGTGTAATGTTTGATCAAAGTTTG
TAAAATGTATATTAA-----TAATTACTATATTAAATAGAGACTTGAGATAAAATTTAAAGGCTTTCTTTTGAAAGATGG
AGGGAGTATTTTATATTTTTATTTGGATTGCAACCATCTCAATATTATTTAGTTTTGGTAAAGTTTTGGTAAAACTAGTA
CGCACGAATAGCACTGCTAGTTTTCATTTACCCACGTACATGTTTGTTTCAGAATCGCAACTCGACATGCCAGTGAAGGA
GCTTCCCCCGCTGCGCGTGAGGGACCTCTTCCTCTCGAGCAGGGCCGACCATGAGATGTTATCCAAATTTCTAGCCAAAG
CAACCCATGCAGCAAGGAGCTACTCCGCCCTTGTGATCAACACATTCGAGGCACGAGAAACAGACGAGCTTCAGAAGATC
CGCGGCGAGATAGGCATGTGCACTACAAAAAGGCATGGCAG--------------------GGAGGAGCAGCAGTGTGCT
TCCGCACGAGGATCACACCTGCATCGAGTGGCTGGACACGCAGATCACGGGGTCGGTGTTGTACGTGAGCGTTGGGAGCC
TGGCGTGCATGGACTCCGGCGAGCTCTCGGAGGTGGCGTGGGGGTTGGCCAACAGCGGCCAGCCGTTCCTATGGGTCGTC
CGGCAGGACCTCGTGCCGGGATCGGACGGACCATGTCTACCGGAAGGGTTCGACGATATGATGAAGGGCAGGGGCAGGGT
GACCCCATGGGCCCCGCAGCAAGAGGTGCTGGCCCACCGTGCGGTGGGCGGGTTGTGGACCCACAACGGGTGGAACTCGA
CGCTCGAGAGTGTAGCCGAGGGTTGCCCGATGATCTGCAGGCCTCAGTTCGCGGACCAGATGATGAACGCGACATACGTG
GATGCGGTGTGGGGCGTAGGCTTTGAGCTCGAAGGTGAGCTGGAGAGGAACAAAATTGCGGAGGTCATTCTGAAGCTTTT
GAAGGGGAGCAAAGGGGAGGAGGCGATGAGAAAGAGAGCAGGAGAGCTTAAGAGGAAAGTAGCGTCCTGCTTGGAGAGTG
GTGGTCTTCCTTGT-TGGCCATTGAGAAATTGATCGACCAGGTATCATCTTTGTAGTTTTT-------------------
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----------------
>SNPs
------------------S-------------S-----------------------S-------S---------------
----S--------------------------------------------S-------------------------S-S--
-----------S-S-----------------S---------------------------------------S---SS---
-S------------S------S-------------------S--------------------------------------
---SS------------S------------S------------------------S--------------S---------
----------------------------S---S-------S---------S----------S-------------S----
-------------------------------------------S------------------------------------
-----------------------------S-----------S---------------------------S----------
---------------------S---------------------------S------------------------------
S------------------------------------------------------------S--S----S----------
-------------------------------------------S------------S-S---S-----------------
-----------------------------------------------------------------S--------------
-----------------------S---------------S----------------------------------------
------------------S----------S--S---------------------------------------S-------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
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------------------------------------------------------S-S--S--------------------
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------------S--S----------------------------------------------------------------
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--------------------------------------------------------------------------------
----SS-S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------------------------------------S----------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------S------------------------SS----------------S--------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-------------------------S---------------------------------------------------
--------S------------------------------------------------S---S------------------
-------------------------------------------------S-------S-------------------S--
---------------------------------------------------------S----------------------
-----S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_324
--------------------------------------------------------------------------------
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----------------------------------------------------------------AGGAGGGTGTGGTCTA
TGGT----------------------------------------------------------------------------
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----------------
>reverse_4803
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--TTGGAGAGCATCAGCGAGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_451
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CTGCCCTCTACACAACGCAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>reverse_4889
--------------------------------------------------------------------------------
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--------ATGGGGTGTAGGGTTTGAGC----------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_4803
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAACGGCTGGAACTCGA
CAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_5911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GAGGGTGAGT
TTCGTCAGCA----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
