>input_sequence_49227
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------------------------------------------------------ATGATGGATGAGAGGAGGACTATCTT
GATGGGCCGTTATGAAATTGGGAAGCAATTGGGACAAGGAAATTTTGCGAAGGTGTATTATGCCCGAAATCTTGCAACTG
GCCAAGCTGTTGCTATAAAGATGATCAATAAAGATAAGGTTACCAAGGTTGGACTTATGGAGCAGATAAAGAGGGAGATT
TCAGTAATGAGATTGGTGAAGCACCCAAATGTCCTGCAGCTTTTTGAGGTTATGGCTACCAAGAGCAAGATTTATTTTGT
ATTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAGATAGTAAAGGAGGGGAAGCTTAATGAGGATGCCGCCAGGAGGT
ATTTCCACCAATTGATCAGCGCTATTGACTATTGCCACAGCAGGGGTGTTTATCACCGTGATCTGAAGCCTGAAAATCTA
CTCCTGGATGAGAATGAAAACCTGAAAGTCTCAGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCGAGGCAGGATGGTCT
CCTGCACACCACATGTGGAACTCCAGCTTATGTTGCCCCTGAAGTGCTTAGCAGGAAAGGTTATGATGGTGCAAAAGCAG
ATGTATGGTCCAGTGGGGTAATTCTGTATGTGCTTGTGGCTGGTTACCTTCCTTTTCATGAGGCAAATCTGATAGAGATG
TATAGAAGGATTTCCAAAGCGGACTTTAAATGCCCTCGGTATTTTTCCGCTGAGCTGAAGGAGCTATTATATAAAATCCT
TGATCCAGATCCCAGTACTAGGATTCCAATCTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATG
CAAAGAAAACTGAGCCTGAAGCAACGCACAACACCTTTTCAGCTGAAGCTGCGTCGTCAGGCTCGACAGGATGCAGCACT
TCTGGGGGAAATC---AAGGGTCATTAAGCCTCCCAAACCTGAATGCATTTGACATCATCTCTCTTTCAACAGGGTTCAA
TCTATCTGGTTTTTTTGAGGATGAGTATGGTCGCAGGGAAGAACGATTTACCACTAGGCAGCCTGTAACAATAGTACTTA
CAAAGTTGAAGGAACTGGCCAAACGCTTGAAGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCA
AAGGAAGGAAAGAAGGGGTTTCTTGAGCTTGATGCTGAGATTTTTGATGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAA
AAAGACTAATGGGGACACTTTCGAGTATCAAAAGTTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGG
TATGGCAAGGTGATCAGCAGCAGCGGTCAGAGCCGATTCTGCAAGGGGAGCAGCATCACTCACCGTCGCCAACACAACAG
CCACATGATGAGTTGCAACCGCCATTGCAACAGCAAGAGGGACAGGATCAGTTGCACCCACCTTTACAACCACAGGAGCA
GCAGAACTTGCAGGAACAACCACCATTGCCACCACAGAATGGCTTCAAACACCAAGATTGA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr3B_1_TraesCS3B01G377800
AACGGCTGCCGAACCTG---CACTCCCTCCATTCTGGAGAAGCGCGCCGCCGCCGGGCTATAATCATCGCTAGGAGCGAA
ATTAGAAGATTCCGAGGGATCTAGCCACAAAAGCCG-AGCGCCATCCCAGAGGA---AGAGTATGAGAGCGCGGCACCTA
CAGCCCAGAAATCCCAGAATCTACCAAGAGCAAGCTTGCAAGGCGGTCAGGCGCGCACCAAATCGGCGCCCGCTCGCTTC
ACGGGATCGATCCCGGTCGATTTCTATGGCGTTCCGTGGGATTCGCGGCGCTTCCTTCTCCCGTTCTTGATCAGGTACTG
TTCTTCTGACAGGAAGAGATCTACTTGCTGGCAGCGCTCTGTTTCGCCCCGTCCTGGGCGTGAATTTTGCCGATTTTGGA
TGCCTGTTGCAGGAATGGTCGGTTTTTGAGTTAGAGTTTTCGAGATTATCGTTTCTGGAACTCAAGAGATGGCATCTTTG
CTTCACCCAATTATCCAACTATGCTGACTCTGATTGCTGTAGATGC-CTTGTTTGTTCTGTACCATCTAAGTTTGATAGA
CAACATTGGGGTATCACCCAAGATTTT-GCCTTAATGTCTTCAAAGGCCACTGAATTTGTGTTTTTT-ATTAGAGCTCGT
-ATCCCACCCTGCATTACATGTATACGTTATAATTTAATCTGATCTTCTGGCTGACAGTTGTTGATCGGACGAAGACCTG
GGAATGCAGAAAGATGTGCTTGCGTAACAGCAAACACTTACTTTGCGCAAACAAGATCAGAGCTTCGTTCAAGCTCATGC
TGTGGGGCTCTCATGATAATGTGCTGCATACTGGTACTGTTGCTTCTCTCTGTGGTCTGAAGCACAGTATATCGAAGGGG
TCAGTATTTGTTGATAATCACATTTGTGAAGACAGTTAACATCTGCTCCATTCATGAGGTATACAGTC-TAGATACTGCT
ATATAAGCGGTGTGTG--GTGTTGGCTTGTTTTACTCCATTCAGATAGCTTGATATGATGGATGAGAGGAGGACTATCTT
GATGGGCCGTTATGAAATTGGGAAGCAATTGGGACAAGGAAATTTTGCGAAGGTGTATTATGCCCGAAATCTTGCAACTG
GCCAAGCTGTTGCTATAAAGATGATCAATAAAGATAAGGTTACCAAGGTTGGACTTATGGAGCAGATAAAGAGGGAGATT
TCAGTAATGAGATTGGTGAAGCACCCAAATGTCCTGCAGCTTTTTGAGGTTATGGCTACCAAGAGCAAGATTTATTTTGT
ATTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAGATAGTAAAGGAGGGGAAGCTTAATGAGGATGCCGCCAGGAGGT
ATTTCCACCAATTGATCAGCGCTATTGACTATTGCCACAGCAGGGGTGTTTATCACCGTGATCTGAAGCCTGAAAATCTA
CTCCTGGATGAGAATGAAAACCTGAAAGTCTCAGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCGAGGCAGGATGGTCT
CCTGCACACCACATGTGGAACTCCAGCTTATGTTGCCCCTGAAGTGCTTAGCAGGAAAGGTTATGATGGTGCAAAAGCAG
ATGTATGGTCCAGTGGGGTAATTCTGTATGTGCTTGTGGCTGGTTACCTTCCTTTTCATGAGGCAAATCTGATAGAGATG
TATAGAAGGATTTCCAAAGCGGACTTTAAATGCCCTCGGTATTTTTCCGCTGAGCTGAAGGAGCTATTATATAAAATCCT
TGATCCAGATCCCAGTACTAGGATTCCAATCTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATG
CAAAGAAAACTGAGCCTGAAGCAACGCACAACACCTTTTCAGCTGAAGCTGCGTCGTCAGGCTCGACAGGATGCAGCACT
TCTGGGGGAAATC---AAGGGTCATTAAGCCTCCCAAACCTGAATGCATTTGACATCATCTCTCTTTCAACAGGGTTCAA
TCTATCTGGTTTTTTTGAGGATGAGTATGGTCGCAGGGAAGAACGATTTACCACTAGGCAGCCTGTAACAATAGTACTTA
CAAAGTTGAAGGAACTGGCCAAACGCTTGAAGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCA
AAGGAAGGAAAGAAGGGGTTTCTTGAGCTTGATGCTGAGATTTTTGATGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAA
AAAGACTAATGGGGACACTTTCGAGTATCAAAAGTTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGG
TATGGCAAGGTGATCAGCAGCAGCGGTCAGAGCCGATTCTGCAAGGGGAGCAGCATCACTCACCGTCGCCAACACAACAG
CCACATGATGAGTTGCAACCGCCATTGCAACAGCAAGAGGGACAGGATCAGTTGCACCCACCTTTACAACCACAGGAGCA
GCAGAACTTGCAGGAACAACCACCATTGCCACCACAGAATGGCTTCAAACACCAAGATTGACATGATGGCAGTACCGGAT
GAAAGTACCTCGTGTGTATTTCCCTGTACTGCTAATTCCATACTCTTTGCAACCATGATTTATGGACAGTCTTTTTTCCT
CCTCTCTAGTTCCTCCTGAATTGTAAAGCTTGTGTGTATAACATAAGTGAATGTATAGTTTCAGTTTTGCATACTATAGG
GGGAAATAAACTCTTGATTCCGTTTTTGAACCTTTTTGAAATAAAATGACTATTGACCAGCACCATCTAGTTCTTTGAGT
TTGTACTTGTTGTAATTTGTTTTCCAAGGAGAGCGAACCTATCTAATGATAGAAATCAAAGTTGGCAATGGTCAAAGAAC
ACGTTTCTGGGAGGATGGTTTGGAGGTATCGTGCTTTCCTAAAAATTACAGAGGGAGTACCTCTGAAGATTAAGGTGCTT
TATTAGTTGGGGT-------------------------------------------------------------------
-------------------------------GATAATGAGTTTCAGGGGGAATAGTAGAAACCTGTTTGCTGTAGGAGTA
GCCGTTGTACCGTGGGCGTTGCGGAAATGCAGAAACGCAGCAGTTCTTGATAATGTCTTTCCTTGTGATCCTTCCAGTAT
TGTACGAGTGGTGCAGATTGCTAGATGGTTAACCTTCTAGAGTGGTTTCCAGAAACGAGATTCACGAGGCGCGGATGTAG
AAGGATCGACAAGACAC--CAGCAAAAAGGAA---GGGAAAAAGAACAAGGAGGAGCTCATGCGAAGACGAAAGTTC-CC
GGATTAGTCTTGTTTTGATGTTTCTGAGTTACTGCTACTGTCTGGTAGTAATAAGCTA----TGCTGTTTTTTGCTGGCT
TTGGTAGCTGGAGTTTGCTGCTGCGTTATGTTCCGAT-----TTACCCCCCGAGTGGCTGCCGCCAAGACTGGTTTTCTT
GCGGGTTCCTGACAGGAGCTGAACGTGAGGCCGGCTTGTTTGTTTTACTTAGGCCCTGTTTGGAATGTCGTTTCTACTTT
GAATACGCTTGTAAAAGTTACAGGCCACCATCCGTCGTTTTCATTTCCCCCTGC
>chr3D_1
AACGGCTGCCAAACCTG---CACTCCCTCCATTCTGGAGAAGCGCGCCGCCGCCGGGCTACAATCATCGCTGAGACCGAA
ATTAGAAGATTCCGAGGGATCTAGCCACAAAAGGCTAAGCGCCATCCCAGAGGA---AGAGTATGAGAGCGCGGCACCTA
CGGCCCAGAAATCCCAGAATCTACCAAGAGCGAGCTTGCAAGGCGGCCAGACGCGCACCAAATCGGCGCCCGCTCGCTTC
ACGGGATCGATCCCGATCGATTTCTATGGCGCTCCGCGGGATTCGCGGCGCTTCCTTCTCCCGTTCTTGATCAGGTACTG
TTCCTCTGACAGGAAGAGATCTACTTGCTGGCAGCGCCCTGTTTCGCCGCGTCCTGGGCATGAATTTTGCCGATTTTGGA
TGCCTGTTGCAGGAATGGTCGGTTTTTGAGTTAGAATATTCGAAATCATCGTTTGTAGAACTCAAGAGATGGCATCTTTG
CTTCACCCAATTATCCAACTATGGTGGCTCTGATTGCTGTAGATGCTCTTCTTTGTTCTGTGCCATCTAAGTTTGATAGA
CAACATTGGGGTGTTACCCAAGA-TTT-GCCTTAATGTCTTCAAAGGCCACTGAATTCGTCTT-TTTCATTAGAGCTCGT
AATCCCACCCTGCATTACATGTATACTTTATAATTTAATCTGATCTTCTTGCTGGCAGTTGTTGATTGGAAGAAAACTTG
GGAATGCAGAAAGATGAGCTTGCGTAACAGCAAACACTTACTTTGCGCAAACAAGATCAGAGCTTCGTTCAAGCTCATGC
TGTGGGGCTCTCATGATAATGTGCTGCATACTGGTACTGTTCCTCCTCTCCGTGGTGTGAAGCACAGTATACCGAAGGGG
TCAGTATTTGTTGATAATCACATTTGTGAAGACAGTTAACATCTGCTCCACTCATGAGGTATACAGTC-TAGATACTGCT
ATATAAGCGGTGTGTG--GTGTTCGTTTGTTTTACTCCATTCAGATAGCTTGATATGATGGATGAGAGGAGGACTATCTT
GATGGGCCGTTATGAAATCGGGAAGCAATTGGGACAAGGAACTTTTGCGAAGGTCTATTATGCCCGAAGTCTTGCAACTG
GCCAAGCTGTTGCTATAAAGATGATCAACAAAGATAAGGTTACGAAGGTTGGACTTATGGAGCAGATAAAGAGGGAGATT
TCAGTAATGAGATTGGTGAAGCACCCAAATGTCCTGCAGCTTTTTGAGGTTATGGCTACCAAGAGCAAGATTTATTTTGT
ATTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAGATAGTAAAGGAGGGGAAGCTTAATGAGGATGCCGCCAGGAGGT
ATTTCCACCAATTGATCAGTGCTATTGACTATTGCCACAGCAGGGGCGTTTATCACCGTGATCTGAAGCCTGAAAATCTA
CTCCTGGATGAGAATGAAAACCTAAAAGTCTCGGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCAAGGCAGGATGGTCT
CCTCCACACCACATGTGGAACTCCAGCTTATGTTGCCCCTGAAGTGCTTAGCAGGAAAGGTTATGATGGTGCAAAAGCAG
ATGTATGGTCCAGTGGAGTAATTCTGTTTGTGCTTGTGGCTGGTTACCTTCCCTTTCATGAGGCAAATCTCATAGAGATG
TATAGAAGGATCTCCAAAGCGGACTTTAAATGCCCTCGGTATTTTTCCGCTGAGTTGAAGGATCTATTACATAAAATCCT
TGATCCAGATCCCAGTACTAGGATTCCAATCTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATG
CAAAGAAAACTGAGCCTGAAGCAACGCACAACACCTTTTCAGCTGAAGCTGCGTCATCAGGCTCAACAGGATGCAGCACT
TCTGAGGGAAATC---AAGGGTCGTTAAGCCTCCCGAACCTGAATGCATTTGACATCATCTCTCTGTCAACAGGGTTCAA
TCTATCTGGGTTTTTTGAGGAGGAGTATGCTCGCAGGGAAGAACGATTTACCACTAGGCAGCCTGTAACAATAGTACTTG
CAAAGTTGAAGGAACTGGCCAAACGCTTGAAGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCA
AAGGAAGGAAAGAAGGGGTTTCTTGAGCTTGATGCCGAGATTTTTGAGGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAA
AAAGACTAATGGAGACACTTTGGAGTATCAAAAGCTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGG
TATGGCAAGGTGATCAGCAGCAGCGGTCAGAGCCGATTCTGCAAGGGGAGCAGCATCACTCACCGTCGCCAACACAGCAG
CCACATGATGAGTTGCAACCACCATTGCAACAGCAAGAGGGACAGGATCAGTTGCACCCACCTTTACAACCACAGGAGCA
GCAGGACTTGCAGGAACAACCACCATTGCCACCACAGAATGGCTTCAAACACCAAGATTGACATGATAGCAGTACCGGAT
GAAAGTACCTCGTGTGTGTTTCTCTGTACTGCTAATTCCATACTCTTTGCAACCATGATTTATAGACAGTCTTTTTT---
-----------CCTCCTGAATTGTAAAGCTTGTGTGTATAACATAAGTGAATGTATAGTTTCAGTTTTGCATACTATAGG
GGGAAATAAACTCTCGATTCCATTTTTCAACCTTTTTGAAATAAAATGATTATTGACCAGCACCATCTAGTTCTTTGAGT
TTCTAATTATCGTAATTTGTTTCCCAAGGAGAGTGAACCTATGCAATGATAGAAATCAAAGTTGGTAATGGTCAAAGAAC
ACGTTTCCGGGAGGATGGTTTGGAGGTAACGTGCTTTGTAAAAAATTCAATCGCCTCTATAATCTGACCTTCAGCAAGAA
TGTCAGTTTCAACTGTTTTTGAGGTGGGCTGCGAATGTTTAAACTTCAGACCGCAACTTGGTGGGGGAGCTAGCTGTT--
-ATCTGGCAGGAATTACATAATTTCTTTGTAGATTTTGAGCTGGGGGAAGAGGAGGATAAATGCGTTTGCTTGGTTGCAA
GCGGCAGCTGGGTTTTTTTTAGCAGACGTAGAGGTTG-------------------------------------------
-------------------------------------------------------------------GGTGCGGATGTAG
AAGGACCGACAAGACACGCCAGCAAAAAGGATGATGGAAAAAAGAACAAGGAGGAGCTCACGCCAAGATGAAAGTTTTCC
-GATTAGCCTTGTTTTGATGTTTGTGAGTTACTGCTACTGTCTGGTAGTAATAAGCTCTGGCTGCTGTTTTTTGCTGGCT
TTGGTAGCTGGAGCTTGCTGCTGCGTTATGTTCCGATTACGATTACCCCCCGAGTGGCTGTCCTCGAGACTGGTTTTCTT
GTGGGTTCGTGACAGGACCTGAACGTGAGGCCGGCTTGTCTGTT------------------------------------
------------------------------------------------------
>chr3A_1
AACGGCTGCCAAACCTGCTGCACTCCCTCCATTCTGGAGAAGCGCGCCGCCGCCGGGCTACAATCATCGCTAAGACCGAA
ATTAGAAGATTCCGAGGGATCTAGCCACAAAAGGCTAAGCGCCATCCCAGAGGAGGAAGAGTATGAGAGCGCGGCACCTA
CAGCCAGGAAATCCCAGAATCCACCAACAGCAAGCTTGCAAGGCGGCCAAACGCGCACCAAATCGGCGCCCGCCTGCTTC
ACGGGATCGATCCCGGTCGATTTCTATGGCGTCCCGTGGGATTCGCGGCGCTTCCTTCTCCCGTTCTTGATCAGGTACTG
TTCTTCCGACAGGAAGAGATCTACTTGCTGGCAGCGCTCTGTTTAGCCCCGTCCTGGGCGTGAATTTTGCCGATTTTGGA
TGCCTGTTGCAGGAATGGTCGGTTTTTGAGTTAGAATTGTCGAAATAATCGTTTCTAGAGTTCAAGAGATGGCATCTTTG
CTTCACCCAGTTATCCAGCTTTGGCG---------------GATGCTCTTGTTTGTTCTGTACCATCTCAGTTTGATAGA
CAACATTGGGGTGTCACCCAAGA-TTTTGCCTTAATGTCCACAAAGGCCACAGAATTTGTGTTTTTTCATTAGAGCTCGT
AATCCCACCCTGCATTACATGTATCCGTTATGATTTAATCTGATCTTCTGGCTGGCAGTTGTTCACCGGAAGAAGACTTG
GGAATGCAGAAAGATGTGCTGGCGTAACAGCAAACACTTACTTTGTGCAAACAAGATCAGAGCTTCGTTCAAGCTCATGC
TGTGGGGCTCTCATGATAATGTGCTGCATACTGGTACTGTTCCTCCTCTCTGTGGTGTGAAGCACAGTATACCGAAGGGG
TCAGTATTTGTTGATAATCACATTTGTGAAGACAGTTGACATCTGCTCCATTCATGAGGTATACAGTC-TAGATACTGCT
ATATAAGCGGTGTGTGTGGTGTTCGTTTGTTTTACTCCGTTCAGATAGCTTGATATGATGGATGAGAGGAGGACTATCTT
GATGGGCCGTTATGAAATCGGGAAGCAATTGGGACAAGGAACTTTTGCGAAGGTGTATTATGCCCGAAATCTTGCAACTG
GCCAAGCTGTTGCTATAAAGATGATCAATAAAGATAAGGTTACCAAGGTTGGACTTATCGAGCAGATAAAGAGGGAGATT
TCAGTAATGAGATTGGTGAAGCACCCAAATGTCCTGCAGCTTTTTGAGGTAATGGCTACCAAGAGCAAGATTTATTTTGT
ATTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAAATAGTAAAGGAGGGGAAGCTTAATGAGGATGCTGCTAGGAGGT
ATTTCCACCAATTGATCAGTGCTATTGACTATTGCCACAGCAGGGGTGTTTATCACCGTGATCTGAAGCCTGAAAATCTA
CTCCTGGATGAGAATGAAAACCTAAAAGTCTCAGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCGAGGCAGGATGGTCT
CCTGCACACCACATGTGGAACTCCAGCTTATGTTGCCCCTGAAGTGCTTAGCAGGAAAGGCTATGATGGTGCAAAAGCAG
ATGTATGGTCCAGTGGAGTAATTCTGTTTGTGCTTGTGGCTGGTTACCTTCCTTTTCATGAGGCAAATCTGATAGAGATG
TACAGAAGGATTTCCAAAGCGGACTTCAAATGCCCTCGGTATTTTTCCGCTGAGCTGAAGGAGCTATTACATAAAATCCT
TGATCCAGATCCCAGTACTAGGATTACAATCTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATG
CAAAGAAAACCGAGCCTGAAGCAAAGCACAACACCTTTTCAGCTGAAGCTGCGTCGCCAGGCTCGACAGGATGCAGCACT
TCTGAGGGAAATC---AAGGGTCATTAAGCCTCCCAAACCTGAATGCATTTGACATCATCTCTCTGTCAACAGGGTTCAA
TCTATCTGGGTTTTTTGAGGATGAGTATGGTCGCAGGGAAGAACGGTTTACCACTAGGCAGCCTGTAACAATAGTACTTA
CAAAGTTGAAGGAACTGGCCAAACGCTTGAAGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCA
AAGGAAGGAAAGAAGGGGTTTCTCGAGCTTGATGCCGAGATTTTCGAGGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAA
AAAGACTAATGGAGACACTATGGAGTATCAAAAGCTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGG
TATGGCAAGGTGATCAGCACCATCGGTCAGAGCCGATTCTGCAAGGGGAGCAACATCAGTCACGGTCGCCAACACAGCAG
CCACATGATGAGTTGCAACCACCATTGCAACAGCAAGAGGGACAGGATCAGTTGCACCCACCTTTACAACCACAGGAGCA
GCAGGACTTGCAGGAACAACCACCATTGCCACCACAGAATGGCTTCAAACACCAAGATTGACATGATAGCAGTACCGGAT
GAAAGTACCTCGTGTGTGTTTCCCTGTACTTCTAATTCCATACTCTTTGCAACCATGATTTATAGACAGTCTTTTTT---
-----------CCTCTTGAATTGTAAAGCTTGTGTGTATAACATAAGTGAATGTATAGTTTCAGTTTTGCATACTATAGG
GGGAAATGAACTCTTGATTCCGTTTTTGAACCTTCTTGAAATAAAATGACTGTTGACCAGCACCATCTAGTTCTTGGAGT
TTCTAACTATTGTAATTTGTTTTCCAAGGAGAGTGAACCTATGTAATGATAGAAATCAAAGTTGGTAATGGTCAAAGAAC
ACATTTCTGGGAGGATGGTTTGGAGGTATTGTGCTTTGTAAAA-ATTCAATCGCCTCTATAATCTAACCTTCAGGAAGAA
TGTCAGTTTCAACTGTATTTGAGGTGGGTTGGGAATGTTTAAATTTCAGATCGCGACTTGGTGGGGGAGCTAACTGTTAT
CATCTGGCAGGAATTACATAATTTCTTTGTAGATTTTGAGCTGGGGGAAGAGGAGGATAAATGTGTTTGCTTGGTTGAAA
GTGGCAGCTGGTTTTTTTTTAGCAGACGTCGAGGTTG-------------------------------------------
-------------------------------------------------------------------GGCGCGGATGTAG
AAGGATCGACAAGACAC--CAGCAAAAAG---GATGGGAAAAAGAACAAGGAGGAGCT-ACGCCGAGATGAAAGTTC-CC
-GATTAGTCTTGTTTTGATGTTTCTGAGTTACTGCTACTGTCTGGTAGTGATAAGCTCTG----CTGTTTTTTGCTGGCT
TTGGTAGCTGGAGTTTGCTGCTGCGTTA-GTTCCGATTACGATTACCCCCCGAGTGGCTGTCGTCGAGACTGGTTTTCTT
GTGGGTTCGTGACAGGAACTGAACGTGAGGCCGGCTTGTCTGTT------------------------------------
------------------------------------------------------
>chr2A_349
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GCTCTGTTTCGCCCCGTACTGGGCGTGAATTTTGCCGATTTTGGA
TGCCTGTTGCAGGAATGCTCGGTTTGTGAGTTGT-ATTTTCGAAATTATCGTTTCTAGAACTCAAGAGATGGCATCTTTG
CTTCACCCAATTATCCAACCATGGCGGCTCTGATTGCTGTAGATGCTCTTGTTTACTCTGTACCGTCCCAGTTTGATCGA
CCACATTGGGGTGTCACCCAAGA-TTT-GGCTTAATGTCCTCAAAGGCCACTGGATTTGTGTT-TTTCATTACAGCTCGT
AATCCCACCCTGCATTACATGTATCCATTATAATTTAATCTGATCTTCTGGCTGGCAGTTGTTCACCAGAAGAAGACTTG
GGAATGCAGAAAGATGTGCTTGCATAACAGCAAACACTTACTTTGCACAAACAAGATCATATCTTCGTTCAAGCTCATGC
TGTGGGGCTCTCATGATAATGTGCTGCATACTGGTACTGTTTCTCCTCTTTTTGGTGTGAAGCACAGTATACCGAAGGGG
TCAGTATTTGTTGATAATCACATTTGTGAAGACAGTTAACATCTGCTCCATTCATGAGGCATACAGTCTTAGATACTGGT
ATATAAGCGGTGTGTGTGGTGTTCGCTTGTTTTACTCCATTCAGATAACTTGATATGATGGATGCGAGGAGGACTATCTT
GATGGGCCATTATGAAATCGGGAAGCAATTGGGGCAAGGAACTTTTGCGAAGGTGTATTATGCCTGAAATCTTGCAACTG
GCC-----------------------------------------------------------------------------
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>chr6B_989
--------------------------------------------------------------------------------
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------------------------------------------AGATAGATTGCTATAATGGATGAAAGGAGGACGATTTT
GATGGACCGTTATGAAATCGGGAGGCACTTAGGGCAAGGGAACTTTGCCAAGGTATATTATGGTCGGAATCTTGCAACTG
GGCAGGCTGTTGCGATAAAGATGATCGATAAGGAGAAGGTTTCAAGGATTGGCCTAATTGTGCAGATAAAGAGAGAGATC
TCAATAATGGGATTGGTAAGGCATCCCAACGTGTTGAAGCTTTTCGAGGTAATGGCTAGCAAGAGCAAGATTTACTTTGT
TTTGGAATATGCCAAAGGCGGCGAGCTTTTCAACAAAATAACCA---AGGGAAAGTTAAGCGAGGATGCTGCGAGGAGAT
ACTTCCATCAGCTCATCAGTGCCGTGGACTACTGCCATAGCCGAGGTGTTTATCATCGCGACTTGAAGCCGGAGAACCTA
CTCCTGGATGAGAATGAAAACCTTAAAGTCTCTGATTTCGGGCTAAGTGCCCTGGCCGAGTCCACGAGACAAGATGGCCT
CCTCCATACCACCTGTGGAACTCCAGCTTATGTTGCCCCTGAAGTGCTTAGCAGGAGAGGCTATGACGGTGCGAAGGCTG
ACATATGGTCCTGTGGAGTAATTCTATTTGTGCTGGTGGCTGGTTTCCTTCCTTTCCACGACACAAATCTTATAGAGATG
TATAGGAAGATCTCCAGGGCTGAATATAGATGCCCTCGCCCTTTTTCTGTTGAGCTAAAGGATCTACTGTATAAGATTCT
TGATCCAGACCCAAGCACTAGGGCTTCTGTTTCAAGGATAAAGAGAAGCGCTTGGTACAGGAAACCCGTTGATGTAAATG
GACTGAAGATTAAACAAGAAACAAGAGATAAGGTTCAGAAAGGTGAACCCACAACCTCTGAATCAACAGAAGGCATCAAT
GCAGAGGTTAACCAAGAAGCGTCATCAAGCCTCACAAACTTGAATGCCTTTGACATAATTTCTCTCTCAACTGGGTTTGA
CCTATCCAATTTGTTCGAGGAGAAGTATGGCCGGAGGGAGGTCAGATTTACCACTAGGCAGCCAGCAGAGGCTATATTTG
CCAAGCTGAATGAAGTGGCCAAGAAATTGAAGCTCAAAATCAAGAAGAAAGAAAACGGTGTCTTGAAATTGGCAGCACCA
AAGGAAGGAATGAAGGGCATTCTTGAGTTTGATGCAGAGGTTTTTGAGTTTGCGCCTTCTTTGCATTTAGTTGAATTAAA
GAAAACCAATGGAGACACTATAGAGTATAAACAACTGATGAAAGATGAGATAAGGCCCGCACTTAAGGATGTGGTTTGGG
CGTGGCAAGGCGAGTCGCA-------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>SNPs
----------S-------------------------------------------------S-----------S--S----
---------------------------------S-S--------------------------------------------
----------------------------------------------S---S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------S------------S-----------------------
-----------------------S--S-----------------------------------------------------
------------S----------S--------------------------------------------------------
------------------------------------------------------S---------------S------S--
--------------------------------------------------------------------------------
-----------------------------------------S--S-----------S--------------S--------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
----------------S----------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-----------S--------------------------------
------------S--------S------------S---------------------------------------------
----------------------------------------------------------------------------S---
--------------------S-----------------------------------------------------------
----S--------------------------------------------------------------S------------
-----------------S---------------------------------------------S-------------SSS
SSSSSSSSSSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--S--S------------------------S--------S----------------------S--------------
-------------------------------------SSS-------SS-SS-SSSS--SSSSSS--SS--S---SSSSS
-S-S----SSSSS-------------------------------------------------------------------
----------------------------------SS----S-SSS--SS--SS--S-S---SS--------SSSSSSSS-
--S-SS-SSSS--SSSSS--SSSSS-SSS-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------------------------------S----------------------------S--S----S-----------
S--------------------------------------------------------S----------------------
------------------------------------------------------------S--S-S--------------
-S------S--------S---------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_116
--------------------------------------------------------------------------------
----------------GGATCTAGCCACAAAAGCCG--------------------------------------------
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------------------------------------------------------
>reverse_1059
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TGGGAAGCAATTGGGACAAG------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>forward_984
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATAAGCGGTGTGTGGTGTTG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>reverse_2485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AACTTGCAGGAACAACCACC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1925
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ACAGGATGCAGCACT
TCTGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3615
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------AAGTTACAGGCCACCATCCG--------------------
