>input_sequence_49220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGAGTCGGATCAGGGCAAGCTCTTCA
TCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAGGTCTCCCAGGCCGCC
GTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGCCGCCGTCGACGCCGC
CCTCCAGGAGCCCCACACCCTCGACGGCCGCACGGTACCTACTCCCCCATCGCTTGGTCTCTTCACCCCACCCAAACCCT
AGCGGGATATTCGCGTCGAATATTCGCTTCGGCCGCCTTCCGATCTACCCCGCTGCAGCGGCCTAGGGTTGCGCGTGTGT
ACTCACGCGTGG---------------------GTTGTGGTTTTGTTGTC---TCAGGTCGATGTGAAGCGGGCGCTCTC
GCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAGGGGGTGGCGGCGGCG
GCGGCGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTGACAGATGAGGAGTTC
CGGCAGTACTTCCAGACCTTCGGAGCTGTCACTGATGTTGTGGTGATGTATGACCAGACAACACAGCGCCCCCGGGGCTT
CGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATCTTGGAGGGAAGATGG
TAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCGGGTGGCGGCGGACGTTCCATGGGAGGTGGGGGTTTT
CATAGTAACAATGGACCCAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATATGGGCAGGTGCAGCA
AGGCAGTGGTGGCTACCCAGGTTATGGTGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGATATGGGCACACCAATC
CTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGGGCTTATGGCAATCCA
AGTGCTGCTGCTTCCGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCAAGCTCCGTCTGGTTA
TGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGAATGCACCTACTAGTC
AGGCACCTGGTGCAGCTGCAGGTTATGGGAACCAGGGCTATGGTTATGGTGGATATGGAGGAGATGCATCATATGGTAAT
CATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGCCTCTGGGTATGGTGC
TGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAGGCGGAGGATTTGGTG
GTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCTAGGGTTGCTCAGTAG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr1D_1_TraesCS1D01G147600
TAAGTACTAGAGACTAGAGATTCTTAGAGTCTTAATTTTTGAAGGGAATTTTAGAGTCTTCTTAATGAAGGCAACACAAA
AAATGTAGAATACGGGAATACCATCTCTACAATCCAAAAACATTAACTTAATCACGATGCAAAAATGCACACATCATGAA
CTTTAAGGAGCCCGACGCTGCCCAGTGTATACGAGATTGCTCCAAATTAATTAATAAAACTAGAAAAACCGATCCATTGA
CAATTCATAGCTTAGTCTGAGTTTATCTGCTCTCGGGTGAACAAGAATTTCGAAAAAATAGCAAAATGATTCGAAAAACC
CTGAATTATTTTGACACCAAGGATGC-TTGAATTTTCTAGGTGCTTGCAAAATTTTGTGCCGAGATTACATCTGGAGGAG
CTCAGCCAAAAAAAAAAG---AAAATGAAAATCAAAGTTCCAAAATGCCCAAAGTTGTTTGAGTTTTCGTTTTTTTTACC
GAGCTCCTTAGATGTCATCTCGCCACGAAAGTGCAGGCACCTAGAAACTTTGGTGTCAAAAAGTTTAATACTTTGCCCCG
CAAAAAAAAGTTTAATACTTTGTTATTTTACCCTTTTTGAGGCAATTTTTGTTATTTTACTAA--TAATATTTGTTTTTG
TGAGACAATTTTTTAATATTTATTATTGTTCACGCACGGGAAGAGATCCACCGGTCCACC---GATGCAGAAACGTCGGC
CTCCAGATCCATTTCATGCAAAGTTCGGCCCATATAGTAGAGTAACAACAAGAACAGCCG--------------------
------------AAGCCCCGATGAGATAGTAAGAAACC----------------CTACTAGTACGCCCACCGATTTCCCG
TGTCCCCCCGCAGGCCCGCACCCCGCACGCGCCCTAAAATATCCCAAAGCCCCCCTCCGCCCCCTCCCGAAGCCGAAATC
CCCCAATTCCCCTCTCTCTCTCCCCTCTCCCCATC---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCCCCCCTCC
CGCACCCGAGCACGAGAGAATCCGAGGAGAGGAGCGGCGCAAGGAGGCGGAGATGGAGTCGGATCAGGGCAAGCTCTTCA
TCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAGGTCTCCCAGGCCGCC
GTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGCCGCCGTCGACGCCGC
CCTCCAGGAGCCCCACACCCTCGACGGCCGCACGGTACCTACTCCCCCATCGCTTGGTCTCTTCACCCCACCCAAACCCT
AGCGGGATATTCGCGTCGAATATTCGCTTCGGCCGCCTTCCGATCTACCCCGCTGCAGCGGCCTAGGGTTGCGCGTGTGT
ACTCACGCGTGG---------------------GTTGTGGTTTTGTTGTC---TCAGGTCGATGTGAAGCGGGCGCTCTC
GCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAGGGGGTGGCGGCGGCG
GCGGCGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTGACAGATGAGGAGTTC
CGGCAGTACTTCCAGACCTTCGGAGCTGTCACTGATGTTGTGGTGATGTATGACCAGACAACACAGCGCCCCCGGGGCTT
CGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATCTTGGAGGGAAGATGG
TAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCGGGTGGCGGCGGACGTTCCATGGGAGGTGGGGGTTTT
CATAGTAACAATGGACCCAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATATGGGCAGGTGCAGCA
AGGCAGTGGTGGCTACCCAGGTTATGGTGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGATATGGGCACACCAATC
CTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGGGCTTATGGCAATCCA
AGTGCTGCTGCTTCCGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCAAGCTCCGTCTGGTTA
TGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGAATGCACCTACTAGTC
AGGCACCTGGTGCAGCTGCAGGTTATGGGAACCAGGGCTATGGTTATGGTGGATATGGAGGAGATGCATCATATGGTAAT
CATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGCCTCTGGGTATGGTGC
TGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAGGCGGAGGATTTGGTG
GTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCTAGGGTTGCTCAGTAG
AAGAGGCTGTTGTAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCAGTATTCTGGCTTTGCTC
TCGTCTTCCTGAAGGCCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGATCCTTTCGTGGCTTA
ACTAGAACTTCAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTATGTTTAGCTTATCCT
TCGGTGTGCTTTGTCATGAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCTTCACTGCTTATGGAC
CAAATTATCTAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATGCTGGATACTCTCTCC
CTATTGTG-TTAAGTCTGAAACGTTTATCGCTGGTGGTTGTGTTCATCTCTGGTTCCTTGCTTTGCTTTAGCTCGCCTTG
GAGTTAAGGTGTTACTTTTATTCTTCAAATTTGACGGCTTGCAACAGATGCTAATCCTGAAACTATGCACTGATAGAAGC
TTGTTACCGTAGCTGCTTCAAACGGACGGTCAAGTGTAGTCCGCTTCTTTATGTAACTGGAATGTGACATCCTATGTATA
CATTTG-TTTTGACAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCGTCTGATGTTTGGTAT
GTAGATTGATAAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAATTTTGCTAGTAC-GTT
TGCAGTGATAAAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATGCCAAAAAATCAGTGATG
CTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGCGAGGCATTTGGCAAGTAAAATAATTGTCCTTCCT
CCTTCGTTTCGTTTCTGTACAGGTTGCACGTGACGCCATTCTG
>chr1A_2
-AAGTACTAGAGACTAAAGATTTTT--AGTCTTATTTTTTGAAGGGAATTTTAGAGTCTTCT-AATGAAGGCAACCCAAC
AGATGCAAAATACGGGAATCCTATCTCTACATTCCAAAAACATTAACTTAATCATGATGCAAAAATGCACACGTCATGAA
CCTTAAAGAGCCCGACGCTGCCCAGTGTATACGTGATTGCTCCGAATTAATTAATAAAACTA-AAAAAACGATCCATCGA
CAATTCATAGCTCAGTTTGAGTTCATCTCCTCTCGGGTGAATAAGAAATTCGGAAAAATAGCAAAAGGATTTGAAAAAAC
CTGAATTAGTTTGACACCAAGGATGATTTGAATTTTCTAGGTGCTTGCAAAATTTGGCGCGTAGATTACATCCGGAGGAG
CTCAGTCAAAAAGAAAAAAGAAAAAAGAAAATCAGAGTTCCAAAATGCCCAAGGTTGCTTGAGTTTTTGTTGTTTTTACC
GAGCTCCTTATAT----------------------GGCACCTAGAAACTTTGAGCATCTTTGGTGTC-------------
----AAAAAGTTTAATATTTTGTTATTTTA-CCTTTTTAAGGCAATTTTTGTTATTTTACTCTACTAGTATTTGTTTTTG
TGAGACAATATTTTAAAATATATTATTGTCCACGTACGGGAAGAGATCCACCGGTCCACGTGG-----------------
---------------ATGTAAAGTTCGGCCCA---AGTAGAGTAGCAACAAGAACACCCAAAAGCCCCTTATACGAGAAA
AAGAACCCCGGAAAGCCCCAATGAGATACTATCAGAAACCCTACTACAGTACTGCTAGTACTACGCCCACCGATTCCCCG
TGTCCCCCCGCAGGACCGCACCCCGCACGCGCCCTAAAATATCCCGAAGC-----------------------CGAAATC
CCCCAATTCCCCTCTCTCTCTCCC-TCTCCCCATC---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCCCCCCTCC
CGCACCCGAGCGCGAGAGAATCCGAGGAGAGGAGCGGCGCAAGGAGGCGGTGATGGAGTCGGATCAGGGCAAGCTCTTCA
TCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAGGTCTCCCAGGCCGCC
GTCATGCGCGACAAGCTCACTGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGCCGCCGTCGACGCCGC
CCTCCAGGAGCCCCACACCCTCGACGGCCGCACGGTACCTACCCCCCC-TCGCTTGGTCTCTTCACCCCACCCAAACCCT
AGCGGTATATTCGCGTCGAATATTCGCTTCGGCCGCCTTCCGATCTACCCCGCTGCAGCGGCCTAGGGGTGTGCATATCT
GGGACGAGGAGTAACTCATGCCTGGGCATCTCTCTTGTGCTTCTGTTGTCTCATCAGGTCGATGTGAAGCGGGCGCTCTC
GCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGTGGCGGCGGCGGCGGCG
GCGGCGGCGATGCCGGTGGTGCTAGGACAAAGAAGATTTTTGTGGGCGGACTGCCCTCCAGTCTGACAGATGAGGAGTTC
CGGCAGTACTTCCAGACCTTCGGGGCTGTCACCGATGTTGTGGTGATGTATGACCAGACAACACAGCGTCCCCGGGGCTT
CGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATCTTGGAGGGAAGATGG
TAGAGGTGAAGCGTGCTCTGCCCCGAGAGGCGAATCCTGGCTCTGGCGGCGGCGGCCGTTCCATGGGAGGTGGGGGTTTT
CATAGTAACAATGGACCCAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATATGGGCAGGCGCAGCA
AGGCAGTGGTGGCTACCCAGGTTATGGTGCTGGAGCTTATGGCAGTGCTCCAACTGGGTATGGATATGGGCACACCAATC
CTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGCTGTTCCTGCTGCGTATGCTGGGGCTTATGGCAATCCA
AGTGCTGCTGCTTCCGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCAAGCTCCGTCTGGTTA
TGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGAATGCACCCACTAGTC
AGGCACCTGGTGCAGCTGCAGGTTATGGAAACCAGGGCTATGGTTATGGTGGATATGGAGGAGATGCATCATATGGTAAT
CATGGAGGGTATGGTGCTTATGGTGGCCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGCCTCTGGGTATGGTGC
TGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAGGCGGGGGATTTGGTG
GTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGTGGTTATGGTGGTATGCAGCCTAGGGTTGCTCAGTAG
AAGAGGCTGTTATAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCGGTATTCTGGCTTTGCTC
TCGTCTTCCTGAAGGCCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGATCCTTTCGTGGCTTA
ACTAGAACTTAAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTATGTTTAGCTTATCCT
TTGGTGTGCTTTGTCATGAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCTTCACTGCTTATGGAC
CAAATTATCTAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATGCTGGATACTCTCTCC
CTATTGTGGTTAAGTCTGAAACGTTGATCGCTGGCGGTTGTGTTCATCTCTGGTCCCTTGCTTTGCTTTAGCTCACCTTG
GAGTTAAGGTGTTACTTTTATTCTTCAAATTTGACGGTTTGCAACAGATGCTAGTCCCGAAACTATGCACTGATAGAGGC
TTGGTACTGTAGCTGCTTCAAACGGACGGTCAAGTATAGTCTGCTTCTTTATGTAACTGGAATGTGACATCCTATTTGTA
CATTCTTTTTTGAGAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCATCTGATGTTTGGTAT
GTAGATGGATTAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAA-TTTTGATAGTACATA
TGCAGTGATAAAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATCCCAAAAAA-CAGTGATG
CTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGCGAGGCATTTGGCAAGTAAAATAATTGTCCTTCCT
CCTTCGTTTCGTTTCTGTACAGGTTGCATGTGACGCCATTC--
>chr1B_629
TTTTTTTC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
AGACAAAATTTTCTATTAT---TTATTGTTCACGCACGGGAAGAGATCCCCTAAAAAAACCTGGATGCAGAAATTTCGCC
CTCCAGATCCATTTCAAGGAAATTTCGGCCCATATAGTAGAGTAACAACAAGAACAGCCAAAGCCCT-------GAGAAA
AAGAACTCCGAAAAGCCCCGATGAGATAGTAAGAAACC----------------CTACTAGTACGCCCACCGATTCCCCG
TGTCCCCCCGCAGGCCCGCACCCCGCACGCGCCCTAAAATATCCCAAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCCCCTCC
CGCACCCGAGCGCGAGAGAATCCGAGGAGCGGAGCGGCGCAAGGAGGCG-AGATGGAGTCGGATCAGGGCAAGCTCTTCA
TCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAGGTCTCCCAGGCCGCC
GTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGCCGCTGTCGACGCCGC
CCTCCAAGAGCCCCACACACTCGACGGCCGCACGGTACCTACTCCCCC-TCGCTTGGTCTCTTCACCCCACCCAAACCCT
AGCGGGATATTCGCGTCGAATATTCGCTTCGGTCGCGTTCCGATCTACCCCGCTGCAGCGGCCTAGGGTTGCGCGTGTGT
GCTCAAGCGTGG---------------------CTTGTGATTTTGTTGTC---TCAGGTTGATGTGAAGCGGGCGCTCTC
GCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAGGGGGT------GGTG
GCGGAGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTGACAGATGAGGAGTTC
CGGCAGTACTTCCAGACCTTCGGGGCTGTCACCGATGTTGTGGTGATGTATGACCAGACAACACAGCGCCCCCGGGGCTT
CGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATCTTGGAGGGAAGATGG
TAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCTGGCGGCGGCGGCCGTTCCATGGGAGGTGGGGGTTTT
CATAGTAACAATGGACCTAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATATGGGCAGGCGCAGCA
AGGCAGTGGTGGCTACCCAGGTTATGGCGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGATATGGGCACACCAATC
CTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGGGCTTATGGCAATCCA
AGTGCTGCTGCATCTGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCAAGCTCCATCTGGTTA
TGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGAATGCACCCACTAGTC
AGGCACCTGGTGCAGCTGCAGGTTATGGAAACCAGGGCTATGGTTATGGTGGATATGGAGGAGATGCATCATATGGTAAT
CATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGCCTCTGGGTATGGTGC
TGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAGGCGGAGGATTTGGTG
GTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCTAGGGTTGCTCAGTAG
AAGAGGCCGTTATAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCAGTATTCTGGCTTTGCTC
TCGTCTTCCTGAAGACCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGATCCTTTCGTGGCTTA
ACTAGAACTTCAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTATGTTTAGCTTATCCT
TCGGTGTGCTTTGTCATCAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCTTCACTGCTTATGGA-
--------CTAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATGCTGGATACTCTCTCC
CTATTGTG-TTAAGTCTGAAACGTTTATTGCTGGTGGTTGTGTTCATCTCTGGTTCCTTGCTTTGCTTTAGCTCACCTTG
GAGTTAAGGTGTTACTTCTATTCTTCAAATTTGACGGCTTGCAACAGATGCTAATCCTG-AACTATGCACTGATAGAAGC
TTGGTACCATAGCTGCTTCAAACGGATGGTCAAGTGTAGTGCGCTTCTTTATGTAACTGGAATGTGACATCCTATGTATA
CATTTG-TTTTGACAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCATCTGATGTT-GGTAT
GTAGATTGATAAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAAATTTTGATAGTATGTT
TGCAGTGATAGAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATGCCAAAAAATCAGTGATT
CTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGTGAGGCATTTGGCAAGTAAAATAATTGTCCTTCCT
CCTTCGTTTCGTTTCTGTACAGGTTGCACGTGACGCCATTC--
>SNPs
----------------S-----S--SS-------S---------------------------S------------S---S
-S---S-S-----------S-S---------S----------------------S-----------------S-------
-S----S--------------------------S---------S------------------S-----S--------S--
------------S---S------S----S------------S-----S----S-------------S----S------S-
--------S----------------S-----------------------------S-S--SS----------S-------
-----S------S----S-------S--------S-----------------S----S---------S---S--------
----------S--SSSSSSSSSSSSSSSSSSSSSS-----------------SSSSSSSSSS--S-SSSSSSSSSSSSSS
SSSS-------------S------------S-------S----------------------SS----S------------
-------------------S-----------------------------------------------------SS---S-
------------------S----------------------------------------S--------------------
---------------------------------------------------------------------------S----
--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS-------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
S----S---------------------------S-----S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S--------S------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------------------------------------------------------------S---SSSSSSSS----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------SS
>forward_985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ATTCCCCTCTCTCTCTCCCC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_2473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TACTAGTC
AGGCACCTGGTG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>forward_1873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGACCTTCGGAGCTGTCACT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_3364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTACCGTAGCTGCTTCAAACG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
