>input_sequence_49114
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----------------------------------------------------ATGAAGCTGCTCTGCGTCCTCGCGGCGG
TCCTCGCCCTCGCGTCCGTGGAGCCCGCCGTCTCG---TCCCCCCGGCGCTACGACTCCATCATCACCTTCGGCGACTCC
TTCACCGACACCGGGAACGCTGTCGTCGTCCTGGCGGAGAAATCGCGGTTCGACCTGACGGTGCAGCCTCCCTACGGCAT
GACCTTCTTCGGCCGCCCCACGGGCCGCTACTCCAACGGCCGCCTCATCATCGACTTCATCGGTACGCACGCCCTTCCCG
GCCACTCTTAC------------TTACTTTCTTCTTCTCGTGCTGATGTATGTATCTGTGCTTGCTTGGCCGGCGTACGT
GCAGCTGAGAAGCTCGGTCTGCCGTTTCTCCCGCCGTACCTCTCGCACAACGGCAGCTTCAGCGAGGGCGTCAACTTCGC
CGTGGCGGGCGCCACCGCTCTCAACGCCAGTTTCTTCAGGGACATCCCGCTTGTAGGCTCGTTTGTTCTCAACACCAGCT
CCAGCGTGCAGCTGGGGTGGTTCCAGTCGCTCAAGCCGTCGCTGTGCAC----GCCCAAGGTAATCAATTACTAGCATTT
CCAATTCCAAACTCAGTGATATGTGTTGATAGATTTGATATGATAATATCCTTGGGACAGTGAGTGAACTTACGTACGCT
CTGTGTGTGTGTTGCAGAGTGCCCGGGCTTCTTCCACAGGACGCTCTTTTTCATGGGCGAAATCGGCCTCAACGACTACA
GCTTCGCTGTCTTCGGAATGACCCTGCCACAGCTCAGATCCATCGTCCCCGACGTCGTCAAAACCATCGCCGCGGCCACT
GAGGTAACC------------ATGCCGGATCTATCAGTCTGAACAACTCTATCTGAAGTCGGCCGGCGCTGATCATGGTA
GATATGCGACCCTGTAAACGCCGAGCAGGCGCTACTCGGGCAGGGGGCGAAGACCGTGGTGGTCCCCGGGATCCCGCCGC
TGGGATGCATGCCGCCGAATCTGGTCTTCTTCCCCAGTAACGAGACGGCAGGCTACGAGTCCAGCACCGGATGCCTGAAA
GGCCTCAACGAGATAGCCAGGCACCACAACTCGGAGCTGCGGAAGGCCCTCGACACGGTCCGGGGAAACCACCCAGATGC
CCGGGTCATCTACGCCGATTTCTTCACCCCCGTCATCGAGATGGTGGAGTCTCCCTACAAATTTGGTCAGTAACCG----
----------TCTTTGTCAATCTACTGACAAATTTGATCAATCTCTGTCCAGTTTGCTCGTTCAAGCTGTGGTG------
-CTGATTAAGATGGCATCGCTTGTTCTGACACAAGTTGTTTATTTACTTCCTTATTGCAATGTGTAGGGCTTACCACGGA
TGTTCTGAGTTGTTGCTGCGGTGGAGGTGGCAAGTACAACTTCAACATAAGCGCCGGTTGCGGTATGCCAGGCGCCACGG
TGTGCCAGGACCCGTCTCAATATCTCTACTGGGACGGCCATTTCACCGAGGCAGCCCACCGCTATATTGCCAAAGGCTGG
CTAAACAGCATAAACAGTTGCAAACCCTGGTAG-----------------------------------------------
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>chr3A_1_TraesCS3A01G141200
CAGCAGCACAGGCAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGG
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATTGAGTATCACGTGCGCGTGCTCCTGGTCCACC
GGATCGTGGAGGCAGCCTCCGGCGACGCCGGTAGGAGATCACGGCAGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGCGAGCTCGAGGAGGAACGCGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCGATG-CCCGCGGGTAATCGCAGCGGGAGGGTACCGCGGCGGCGCAGATCTGGGCTGCAGCGGTG
GAGGAGGTAACTGCCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCTG--CGGCGCCGGCCCCTGGCGACGTGCAGGCGACGGACGGAGGAAGAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTCAAACCACGAGGGG-TTTTT--T--GCAAAATTATCAGTTAACTACGCCCACGACATGTTTTTCGG
GACGGAGGGAGTACTATATTTGTATTTATGACAAGTTTCTCTTTTTTTCTAGGTCACCTCTCGGGCACGATGAGTCGTTT
TCTTTACTCTTTTATAAAAACATGAAACCA---GTTGACGCGCAAAATTTGGGCGTGGCCAACTTGCCATTAGCTGCAGG
CGACCATGTACCAGTATACATGTAGAACAATAGTACTATAAATTTCGTAGAGTCTACGCTCGTAGTCGTACTCCATTAAC
TTCATCTCCTCTCCCGTCGACTGGCCCGAGCTTCCCAGGGCGAGGAGCGACGATGAAGCTGCTCTGCGTCCTCGCGGCGG
TCCTCGCCCTCGCGTCCGTGGAGCCCGCCGTCTCG---TCCCCCCGGCGCTACGACTCCATCATCACCTTCGGCGACTCC
TTCACCGACACCGGGAACGCTGTCGTCGTCCTGGCGGAGAAATCGCGGTTCGACCTGACGGTGCAGCCTCCCTACGGCAT
GACCTTCTTCGGCCGCCCCACGGGCCGCTACTCCAACGGCCGCCTCATCATCGACTTCATCGGTACGCACGCCCTTCCCG
GCCACTCTTAC------------TTACTTTCTTCTTCTCGTGCTGATGTATGTATCTGTGCTTGCTTGGCCGGCGTACGT
GCAGCTGAGAAGCTCGGTCTGCCGTTTCTCCCGCCGTACCTCTCGCACAACGGCAGCTTCAGCGAGGGCGTCAACTTCGC
CGTGGCGGGCGCCACCGCTCTCAACGCCAGTTTCTTCAGGGACATCCCGCTTGTAGGCTCGTTTGTTCTCAACACCAGCT
CCAGCGTGCAGCTGGGGTGGTTCCAGTCGCTCAAGCCGTCGCTGTGCAC----GCCCAAGGTAATCAATTACTAGCATTT
CCAATTCCAAACTCAGTGATATGTGTTGATAGATTTGATATGATAATATCCTTGGGACAGTGAGTGAACTTACGTACGCT
CTGTGTGTGTGTTGCAGAGTGCCCGGGCTTCTTCCACAGGACGCTCTTTTTCATGGGCGAAATCGGCCTCAACGACTACA
GCTTCGCTGTCTTCGGAATGACCCTGCCACAGCTCAGATCCATCGTCCCCGACGTCGTCAAAACCATCGCCGCGGCCACT
GAGGTAACC------------ATGCCGGATCTATCAGTCTGAACAACTCTATCTGAAGTCGGCCGGCGCTGATCATGGTA
GATATGCGACCCTGTAAACGCCGAGCAGGCGCTACTCGGGCAGGGGGCGAAGACCGTGGTGGTCCCCGGGATCCCGCCGC
TGGGATGCATGCCGCCGAATCTGGTCTTCTTCCCCAGTAACGAGACGGCAGGCTACGAGTCCAGCACCGGATGCCTGAAA
GGCCTCAACGAGATAGCCAGGCACCACAACTCGGAGCTGCGGAAGGCCCTCGACACGGTCCGGGGAAACCACCCAGATGC
CCGGGTCATCTACGCCGATTTCTTCACCCCCGTCATCGAGATGGTGGAGTCTCCCTACAAATTTGGTCAGTAACCG----
----------TCTTTGTCAATCTACTGACAAATTTGATCAATCTCTGTCCAGTTTGCTCGTTCAAGCTGTGGTG------
-CTGATTAAGATGGCATCGCTTGTTCTGACACAAGTTGTTTATTTACTTCCTTATTGCAATGTGTAGGGCTTACCACGGA
TGTTCTGAGTTGTTGCTGCGGTGGAGGTGGCAAGTACAACTTCAACATAAGCGCCGGTTGCGGTATGCCAGGCGCCACGG
TGTGCCAGGACCCGTCTCAATATCTCTACTGGGACGGCCATTTCACCGAGGCAGCCCACCGCTATATTGCCAAAGGCTGG
CTAAACAGCATAAACAGTTGCAAACCCTGGTAGTAATTGGATGCTACGCGGATTTGTATACTTATTACAACTTTTACTGA
TCACCGATATACACGAGTCACCGATACACAGGCTTGCCAATTCGTCACGAGGTTTTCTATGTATTCATTATGGTTGTGGT
TTCATTCATGTTTTCCCGAAAACGTGCCGACATTTACATCTGTTAATGTGCCCAACCATCTTTTCTTTTGTTGAGATCAA
TATTCCATTGCGAAAGTTGAAGTATCATGTCTAATTTTTTTTTACAGTCGATGATCTCTGCATGGTCACCTGCGCGTCGT
AACCCGTCCGTCCAATGGTTCTAGCACGGGCGCCCACAGTCACAGTATGGTCGTCCGACGGTTCCAGCACGACCACCCTG
AAGTCGCCCGGCGGCCGCAAACCCTCTAGGTGCGCTGAAGCATCGAGTGGCGAGCTCCGTGATGGATGCAACACCAAGCC
ATGCGAGCTTGCGGCACTCGTCCAGTGTGGTCACTCCTTGCCTCTGGCTCCCGTAGCAGCACCCCGTGCCCGCTTCGAGG
AGCTTGTGAGATAGATTTTTCCAACGTCGCTCGTCCCTCACAAACGGTGTGATCTACAACCCACTGGTAGAGCAAGGTCC
GGTGACATCGAGCATACCGGAGGAGCGAGATTGAGATGGGCTAGCGGTGGTTATAGGTGAGGAGAGCAAAGAGTACCGGA
GGAGCCGCACCGACGCGGGTAGGAGGTGGACGAAAGGATGGGCACACAACACGGATGGCCTAGAGGCAAAGGGGAAGGTA
TAAGGGTGTGGCAAGCGGTCGCGTGGGCGCCACACAGGACACGCGACATTAGAAGAGGGGAGGTCCTCCCTAGTGCCTTA
AGCGCTTCGCGTGCATGCAAGCCGGCTGTGGCCCATACTCACTCCAGCTATTCCCTCGCTTCGCCTGCTAGTCTTTTTGT
GTGCTGTTGGTCTGGTAGGAAAAACAACCGTCTTTTTAATACCACTGAACAAAATTATGAATTCGAAAAAGTT
>chr2A_1
CAGCAGCACAGGCAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATTGAGGATCACGTGCGCGTGCTCCTGGTCCACC
GGATCGTGGAGGCAGCCTCCGGCGACGCCGGTAGGAGATCACGGCAGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGCGAGCTCGAGGAGGAACGTGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCGACG-CCCGCGGGTAATCGCAGCGGGAGGGTACCGCGGCGGCGCAGATCTGGGCTGCAGCGGTG
GAGGAGGTAACTGCCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCTGGGCGGCGCCGGCCCCTGGCGACGTGCAGGCGACGGACGGAGGAAGAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTCAAACCACGAGGGG-TTTTT--T--GCAAAATTACCAGTTAACTACGGCCACGACATGTTTTTGGG
GACGGAGGGAGTA-------------------------------------------------------------------
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>chr2B_1
CAGCAGCACAGGCAGC-TCAGTGGAGCAGCAGCAGCATGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATTGAGGATCACGTGCGCGTGCTCCTGGTCCACC
GGATCGTGGAGGCAGCCTCCGGCGACGCCGGTAGGAGATCACGGCAGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGCGAGCTCGAGGAGGAACGCGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCGACG-CCCGCGGGTAATCGCAGCGGGAGGGTACCGCGGCGGCGCAGATCTGGGCTGCAGCGGTG
GAGGAGGTAACTGCCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCTGGGCGGCGCTGGCCCCTGGCGACGTGCAGGCGACGGACGGAGGAAGAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTCAAACCACGAGGTTTTTTTT--T--GCAAAATTACCAGTTAACTACGCCCACGACATGTTTTTCGG
GACGGAGGGAGTAC------------------------------------------------------------------
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>chr2B_1
CAGCAGTACGGGCAGGGTCAGCGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATTGACGAGGTCGCGCTAGAGATTGAGGATCACGTGTGTGAGCTCCTGGTCCATC
GGATCGTGGAGGCAGGCTCCGGCGACGCCGGTAGGGGATCACGGCGACGCACGCGCCGGAGCTCGAGGAGGACGCGCCGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGGGAGCTCGAGGAGGAACGCGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCGACG-CCTGCAGGTAATCGCAGCGGGAGGGTACCGCGGCGACGCAGGTCTGGGCTGCAGCGGTG
GAGGAGGTTACTGTCGATGGCGGCGAGAGCATGTAATTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCCGGGCGACGCCGGCCCCTGGCGACGCGCAGGCGACCGACGGAGGAAGAAGACGGGGCGGAGGGACTTG
TTTGAAACGCTTTTGAAACCACGA-GTTTTTTTT--T--GCAAAATTACCAGTGAACTACGCTCACGACATGTTTTTCGG
GACGGAGGGAGTA-------------------------------------------------------------------
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>chr1B_1
CAGCAGCACAGGCAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATTGAGGATCACGTGCGCGTGCTCCTGGTCCACC
GGATCGTGGAGGCAGCCTCCGGCGACGCCGGTAGGAGATCACGGCAGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAAGACGTGCGCGGGCTTGAGGAGGATGCGGGCGAGCTCGAGGAGGAACGCGCATGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCGACG-CC-GCGGGTAATCGCAGCGGGAGGGTACCGCGGCGGCGCAGATCTGGGCTGCAGCGGTG
GAGGAGGTAACTGCTGATGGCGGCGAGAGCATGTACTTGGCGACGACGGAGGAGCTCAGTTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCTGGGCGGCGCCGGCCCCTGGCGACGTGCAGGCGACGGACGGAGGAAGAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTCAAACCACGA-GGTTTTTTT--T--GCAAAATTACCAGTTAACTACGCCCACGACATGTTTTTCGG
GACGGAGGGAGTACTAT---------------------------------------------------------------
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>chr4B_1
CAGCAGCATGGGCAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACG-GTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCACGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATTGAGGATCACGTGCGCGAGCTCCTGGTCCACC
GGATCGTGGAGGCAGGCTCTGGCGACGCTGGTAGGGGATCACGGCAGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGGGAGCTCGAGGAGGAACGCGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGTGACG-CCCGCAGGTAATTGCAGCGGGAGGGTACCGCGGCGGCGCAGGTCTGGGCTGCAGCAGTG
GAGGAGGTAACTACCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCATCTAGC
GAATCACGCAGCTGGGCGGCGCCGGCCCCTGGCGACGCGCAGGCGACGGACGGAGGAAAAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTGAAACCACGA-GGTTTTTTT--TTTGCAAAATTACCAGTGTACTACGCCCACGACATGTTTTT-GG
GACGGAGGGAGTAC------------------------------------------------------------------
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>chr7B_1
CAGTAGCACGGGCAAC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCAGCAGCACGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTAGAGATTGAGGATCACGTGCGCGAGCTCCTGGTCCACC
GGATCGTGGAGGCAGGCTCCGGCGACGCCGGTAGGGGATCACGGCGGCGCACGCGCCGGAGCTCGAGGAGGACGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGGGAGCTCGAGGAGGAACCCGCACGACCTCTAGGAAGACGT
AGTGGGAGATTCCGGCGACG-CCTGCAGGTAATCGCAGCGGGAGGGTACCGCGGCGGCGCAGGTCTAGGCTGCAGCGGTG
GAGGAGGTTACTGTCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGAGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
AAATCACGCAGCTGGGCGGCCCCGGCCCCTGGCGACGCGCAGGCGACGGACGGAGGAAGAAGACGGGGCGAAGGGACTTG
TTTGAAACGCTTTTGAAACCACGA-GGTTTTT-T--TTTGCAAAATTACCAGTGAACTACGCCCACGGCATGTTTTTCGG
GACGG--GGAGTAC------------------------------------------------------------------
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>chr7B_1
CAGCAGCACGGGCAGC-TTAGTGGAGCAGCAGCAGTACGGGCAGGGTTAGCGGAGCAGCAGCAGTACGGGCAGGGTCAGC
GGAGCAGCATCAGCATGGGCAGAAACCACCGGCGACAGGGGAGAAGCAGCCACACGGGTGCGTGGGCAGGGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTAGAGATTGAGGATCACGTGCGCGAGCTCCTGGTCCACC
GAATCGTGGAGGCAGGCTCCGACGACGCCGGTAGGGGATCACCGCGGCGCACGCGCCGGAGCTCGAGGAGGATGCGCGGG
AGCACGAGGAGGACGTGCGCGGGCTTGAGGAGGATGCGGGGGAGCTCGAGGAGGAACGCGCACGGCCTCGAGGAAGACGT
AGTGGGAGATTCCGGCAACG-CCCGCAGGTAATTGCAGCGGGAGGGTACCGCGGCGGCGCAGGTCTGGGCTGCAGCGGTG
GAGGAGGTTACTGCCGATGGCGGCGAGAGCATGTACTTGGCGACGGCGGGGGAGCTCAGCTGGGCTCGCCAGCCCCTGGC
GAATCACGCAGCTGGGCGGCGTCGGCCCCTGGCGACGCGCAGACGACGGACGGAGGAAGAAGACGGGGCGAAGGGACTTG
TTTGAAACGCTTTTGAAACCACGA-GGTTTTT-T--TTTGCAAAATTACTAGTGAACTACGCCCACGACATGTTTTTCGG
GATGGAGGGAGTATTAAATTT-----------------------------------------------------------
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>chr5D_1
CAGCAGCACGGGTAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGAAGCAGCGGTAGCACGGGCAGGGTCAGT
GGAGCAGCAACAGCACGGGCAAAGACCACCGGTGAGAGGGGAGAAGCAGCCGCACGGGTGCTTCGGCA-GGGAGAAGGAG
CAGCACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATCGAGGATCACGTGCGCGTGCTCCTGGTCCACC
GGATCATGGAGGCAGGCTCCGGCGACGCCGGTATGGGATCACGGCGGCGCACGCGTCGGAGCTCAAAGAGGATGCGCGGG
AGGACGAGGAGGATGTGCGCGGGCTTTAGGAGGATGCGGGGGAGCTCGAGGAGGGACGCGCACGGCCTCGAGGAAGACGT
AGCGGGAGATTCCGGCGATTCCC-GCAGGTAATCGCAGCGGGAGGGGACCGCGGCGGCGCAGGTCTGGGCTGCGGCGGTG
GAGGAGGTAACTGCCGATGGCGGTGAGAGCATGTACTTGGCGACGGCGGAGGAACTCAGCTGGGCTCGCCGGCCCCTGGC
GAATCACGCAGTTGGGCGGCGCCGGCCCCTGGCGACGCGCAGGCGACGGGTGGAGGAAGAAGACGGGGCGGAGGGACTTG
TTTGAAACGCTTTTGAAACCATGA-GGGGTTTTTTGC-----AAATTACCAGTGAACTATGCCCGCGACATGTTTTTCGG
GATGGAGGGAGTAATTTATT------------------------------------------------------------
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>chr4A_1
CAGCAACACGGGCAGC-TCAGTGGAGCAGCAGCAGCACGGGCAGGGTCAGTGGAGCAGCGGCAGCATGGGCAGGGTCAGT
GGAGCAGCAACAGCACGGGCAGAGACCACCGGCGACAGGGGAGAAGCAGCCGCACGGGTGCGTCGGCAGGGGAGAAGGAG
CAACACGGGTGCGCGGGCGTGGGAGATCGACGAGGTCGCGCTGGAGATCGAGGATCACGTGCGCGAGCTCCTGGTCCACC
GGATCATGGAGGCAGGCTCCGGCGACGCCGGTAGGGGATCACGACGATGCACGCGCCGGAGCTCGAAGAGGATGCGCGGG
AGGACGAGGAGGATGTGTGCGGGCTTCAGGAGGATGCGGGGGAGCTCGTGGAGGGACGCACACGGCCTCGAAGAAGACGT
AGCGGGAGATTCCGGCGACA-CCTGCAGGTAATCGCAGCGGGAGGGGACCGCGGCGGCGCAGGTCTGGGCTGCGGCGGTG
GAGGAGGTAACTGCCGATGGCGGCGAGAGAATGTACTTGGCGACGACGGAGGAGCTAAGCTGGGCTCGCCGGCCCCTGGC
GAATCACGCAGCTAGGCGGCGCCGGCCCCTGGCGACGCGCAGGCGACGGGCGGAGGAAGAAGACGGGGTGGAGGGACTTG
TTTGAAACGCTTTTGAAACCACGA-GGTTTTTTTTTTTTGCAAAATTACCAGTGAACTACGCCCGCGACATGTTTTTTGG
GACAGAGGGAGTACT-----------------------------------------------------------------
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>chr3B_771
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-----------------------------------------------------------CTCGGGCACGAAGAGTCATTT
TTCTCTAGTACTACTAATTATACCTAAAACCCCGTTGACGCGCAAATTTT-GGCGTGGCCAACTTGCCATTAGCTGCCGG
CGACCATGTAC-----TCCATGTAGAACAATAGTG-TATAAATCACGCAGAGTCTACGCTCGTAGTCGTACTCCATTAAT
TCCATCTCCGCCCCCGTCCGCTGGCCCGATCTTCCCAGGGCGAGGAACGACGATGAAGCTGCTCTGCATCCTCACGGTGG
TCCTCGCCCTCGCGTCCGTCGAGCCCGCCGTCTCG---TCCCCCCGGCGCTACGAATCCATCATCACCTTCGGCGACTCC
TTCACCGACACCGGAAATGCCATCATCGTCTTGGCGGAGAAATCGCGCTTCGACCCTACGGTGCAGCCTCCCTACGGCAT
GACGTTCTTCGGCCGCCCCACGGGCCGCTACTCCAACGGCCGCCTCATCATCGACTTCATCGGTACGCACGCCCTTC--G
GCCGCTCTTACTTGCACACACTTTTACCTTCTTCTTCTCGTGCTGATGTAT----CTGTGCTTGCTTGGCCGGCGTACGT
GCAGCTGAGAAGCTCGATCTGCCGTTCGTCCCGCCGTACCTCTCGCACAACGGCAGCTTCAGCGAGGGCGTCAACTTCGC
CGTGGCGGGCGCCACCGCTCTCAACGCCAGTTTCTTCAGAGACATCCCGCTCGTAGGCTCGTTTGTTCTCAACACCAGCT
CCAGCGTGCAGCTGGGGTGGTTCGACTCGCTCAAGCCGTCGCTGTGCAGCCCTGCCCAAAGTAATCAATTATTAACACAT
CCAATTCCAAACTCA-----------------ATTTGAT---ATGATATCCTTGGGACAGTGA----ACTTACGTACGCT
GTGCGT--GTGTTGCAGATTGCCCGGGCTTATTCCACAAGACGCTCTTCTTCATGGGTGAAATTGGCCTCAACGACTACA
GCTTTGCGGTCTTCGGAATGACCCTGCCCGAACTAAGATCCATGGTCCCAGACGTCGTCAAAACCATCGCCGCGGCCACT
GAGGTAACCGTTGCAGCAACCATGCCGAATCTATCAGTCTGAACAACTCTGTCTGAAGTTGGCCGGTGCTGATCCTGGTA
C----GCGACTCTGTAAATGCCGAGCAGGTGCTACTCGGGCAGGGGGCGAAGACCGTGGTGGTGCCCGGGATCCCGCCGC
TGGGATGCATGCCGCCGAATCTGGTGTTCTTCCCCAGCAACGAGTCGGCAGGCTACGAGCCTAGCACCGGATGCCTGAAA
GGCCTCAACGAGATCGCCAGGCACCACAACTCGGAGCTGCAGAAGGCCCTCGACAAGGTCCGGGGGAACCACCCGAATGC
CCTGGTCATCTACGCCGATTTCTTCACCCCGGTCATCGAGATGGTGGAGTCTCCCCACAAATTTGGTCAGTAACCGTAGC
ACGGGTTGCCTCTTTGTCATTCTACTAACAGATTTGGCCAATCTCTTGCCATTTTGCTCGTTCTAGCTGTGGTGGTGATC
ACTGATCAAGATGGCATCGCTTGTTCTGACA----------------------------ATCTGTAGGGCTTACCACGGA
CGTTCTGAGCTGTTGCTGCGGTGGAGGTGGCAAGTACAACTTCAACATCAGCGCTGGCTGTGGCATGCCAGGCGCTACCG
TGTGCGAGGACCCGTCTCAATATCTGTACTGGGACGGCCATTTCACGGAGGCAGCCCACCGCTATATTGCCAAAGGCTGG
CTAAACAGCATAAACAGTTGCAAACCCTGGTAGTAACTGGAT---ATGCGGAATTGCATAC---TTACAACTTTTTTTAA
TCACCGATATACACGCGTCA------------------------------------------------------------
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>chr3D_816
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--------------------------AAACCCCGTTGACGCGCTAATTTT-GGCGTGGCCAACTTGCCATTAGCTGCCGG
CGACCATGTCC-----TACATGTAGAA-------G-TATAAATCACGCAGAGTCTACGCTCGTAGTCGTACTCCATTAAT
TCCATCTCCTCCCCCGTCCGCTGGCCCGAGCTTCCCAGGGCGAGGAACGACGATGAAGCTGCTCTGCATCCTCACGGTGG
TCCTCGCCCTCGCGTCCGTGGAGCCCGCCGTCTCGTCATCCCCCCGGCGCTACGAATCCATCATCACCTTCGGCGACTCC
TTCACCGACACCGGAAACGCCATCGTCGTCCTGGCGGAGAAATCGCGCTTCGACCCTACGGTGCAGCCTCCCTACGGCAT
GACGTTCTTCGGCCGCCCCACGGGCCGCTACTCCAACGGCCGCCTCATCATCGACTTCATCGGTACGCACGCCCTTC--G
GCCGCTCTTACTT----ACACTTTTACTTCCTTGTTCCCGTGGTGATGC----ATCTGTGCTTGCTTGGCCGGCGTACGT
GCAGCGGAGAAGCTCGATCTGCCGTTCGTCCCGCCGTTCCTCTCGCACAACGGCAGCTTCCGCGAGGGCGTCAACTTCGC
CGTGGCCGGCGCCACCGCTCTCAACGCCAGTTTCTTCAGAGACATCCCGCTCGTAGGCTCGTTTGTTCTCAACACCAGCT
CCAGCGTGCAGCTGGGGTGGTTCGAGTCGCTCAAGCCGTCGCTGTGCAGCCCTGCCCAAGGTGATCAG---TTAGCACAT
CCAATTCCAAGCTAAATCATATGTATTGACTGATTTGAT---ATGACATCCTTGGGACAGTGA----ACTTACGTACGCT
GTGTGA--GTGTTGCAGAGTGCCCGGGCTTCTTCCACAAGACGCTCTTCTTCATGGGCGAAATTGGCCTCAACGACTACA
GCTTCGCGATCTTCGGAATGACCCTGCCACAGCTCCGATCCATGGTCCCAGACGTCGTCAAAACCATCGCCGCGGCCACT
GAGGTAACCGTTGCAGCAACCATGCCGAATCTATCAGTCTGAACAACTCTGTCTGAACTTGCCCGGTGCTGCTCATGGTA
C----GCGACTCTGTAAATGCCGAGCAGGTGCTGCTCAGGCAGGGCGCGAAGACCGTGGTGGTGCCCGGGATCCCGCCGC
TGGGATGCATGCCGCCGAATCTGGTCTTCTTCCCCAGCAACGAGTCGGCGGGCTACGAGCCTAGCACCGGATGCCTGAAG
GGCCTCAACGACATCGCCAGGCACCACAACTCGGAGCTGCAGAAGGCCCTCGACAAGGTCCGGGCAAACCACCCAAATGC
CCTGGTCATCTACGCCGATTTCTTCACCCCGGTCATCGAGATGGTGGAGTCTCCTCACAAATTCGGTCAGTAACCGGTCA
TAAATCTACTGACATT--------CTGACAAATTTGGCCAATCTCTTGCCATTTTGTTCATCCAA--------G------
-CTGATCAAGATGGCATCGCTTGTTCTGACAGAAGTTTATTCTGATTTAT----TTACAATCTGTAGGGCTTACCACGGA
CGTTCTGAGCTGCTGCTGCGGTGGAGGTGGCAAGTACAACTTCAACATCAGCGCTGGCTGTGGCATGCCAGGCGCCACGG
TGTGCGACGACCCCTCTGAATATCTGTACTGGGACGGCCATTTCACTGAGGCAGCTCACCGCTATATTGCCAAAGGCTGG
CTAAACAGCATAAACAGTTGCAAACCCTGGTAGTAACTGGAT---ACGCGGATTTGTATATT--TTACAACTTTTATTAA
TCACCGATACACACGCGTCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----S---
-SS-SSSSSSS-SS---SS-S-SSS--SSS----------------S---S--------------------------S--
-----------SSSSS------------------SS-------SS--S-------------------------------S
-S---------S------SS--------------------------S--------------------S-----S---S--
-------------------------------------------------------S------------------------
--------------S-----SS-------------------------S-------SS-----------------------
---S-------------------------------------------------------------------------SS-
---S-----------------------------------------------SS---------------------------
----------------S---------SS----------------------------------------------------
---------------------------------------S-----------S----------------------------
-----------------------S------------------------S----------------------S-----SS-
---------------S-S------S----SS--------SSS--S------------------SSSS-------------
S-----SS------------------------------S---------S--------------S----------------
-------S-----------------------------------S-----S------------------------------
---------------------------S----------------------S--------S------S-------------
SSSSS-----S-------S----------S---------------------------------S----------------
-------------------------------------S------S--------------S-S------------------
--------------S-------------------------S--------------S-------------------S----
--S---------------------------S------------------------S------------------------
-------------------S----------------SS--------SS---S----------------------------
------S------------------------S-----SS--S-SSSS-SSSSSS--S----S------------------
S--------S--------------------------------------S-----S--S--S--S----------------
-----S-------------------S--------------------S---------------------------------
------------------------------------S-----SSS-----------------SS------------S-S-
---------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------AAACCAGTTGACGCGCAAAA---------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>reverse_1768
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGTCTTCGGAATGACCCTGC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTCATCTCCTCTCCCGTCGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_1810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGACGTCGTCAAAACCATCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1804
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGCCACAGCTCAGATCCATC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3517
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTGT
GTGCTGTTGGTCTGGT---------------------------------------------------------
