>input_sequence_49113
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---------------------------ATGACATCCCCTTCCCTTCCTTCCTTCCCCTCCTCCCTTCTCACTCCCCTGTC
TCTCACTCACCCACTC-GCGCCCGCGCACACAGAACGAGCC-AAGGAAGCAAGGAGGAATTGCCATTTCGGGAAAGGAGA
GGAGAATCAGATCGGGCAGATGGCCGCCGGCGACGTCGCC------------------AGCCTCGGCACTCGCCTAGCCG
TCTCCTTCCCCGCCGCATCCACCACCGTCGCCGACCTCAAGCGTGCGTATTTTCTTGCTTCTCTACCTTCTT--------
------GCTTGTCTACCGCCGGCTGGCTGGCTTTGCGATGGTT---------------------CAATCCTCCTGCCTCT
AGAACAAATCTTGGC--------TATTCCTCTCGGTTGCAAATCAAATCAGATCAATTCTT-TTCGGCCTGAGCTGACAA
AACCCCAATC-------------------------------------TTGGGTTAATTTCCTTTTT-----------TGG
TTTGTACCAGGCAGAGTGAGTCATGAGCACGCCGCATGTTTCCCCAACTTTGGCCAGATCGCCGTCCAATCCGTCAAGGT
A---------------CTGTCCAATCCATCACGGAAATTGGCTGATCCATCGATTTTA---ATTAACATGGCCGCTGTCC
CATGTTGAA----------TGCTGCTGC-----CTTGAGCAGGTTGACCAGGGAGGCGCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGATGCATTCCAGTTCCACGGGGCCAACGAAACCTGGCACCTCCAAGTAGACGCTCTGCCTCACCCTC
AGCATCTCGACCAAGGAATGGCCACCGAG---GGACACTCCAAGGATTC---CTCTGCTACTCACTCTGAACCAAGCTGT
GAGATGCTGGGTGACCAGGTTAAAGTTGAAGTTGGAGCGGACTCTGAACCAAGCTG------TGAGATGCTGCCTGATCA
GGTTAAAGTTGAAGTTAGAGCGGAGG---------------------------------AGACATTGGCAGCCAAGGGCA
AAAGAAGCAGCAACGGGGCTGATCCAAAGGGATCGAAGGAAGCAGAGGCCACATCAACAGAACAGAGGGCATGTGACAG-
--AAGGCTGCGGCCAAGGACTAGAGTTGGCAAAACACCCATCACTAAGGCGGTGAA------------------------
---------------------------------CAGCAGCGGCAGCTCGGAGTCGGAGGGAATGGACATCAACACCGTCG
GCGTCG---------ACGCGCCGCCGTCGCAGTTCGTCGTCATGCTCAAGGAATGCCACTTTGTCACCAAGAATGGGCAG
TACCTGGTGAGAGCGTCCC-T-ACTCT--ACTCGATCACA----CGCGCACTTTCGTCCCTGTAACTAACTCCGTGTCTC
CGTCGCCGCCGATCGAC----GCAGAACGTGCCGCGGGGGTTCAGCGTGGCGCATCGGTACGCGGAGAGGAAGAAGGTGC
TGCTGCGGATGGGAGGCGAGTCGTGGATGGTGAACCTGAAGCACGTCCACATTGTGCGTGGCAAGACCCGCACGTCCTTC
CGGTACGGGTGGCACCAGTTCTGCGTTGACAACCACCTCCGCGTCGGCGAGACATGCTTCTTCCGAGCGCTCGGCCAAGG
CGGCG---GCGGCGACCGCCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGACGGCAGTTACGCCAGCTGA----------
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>chr2B_1_TraesCS2B01G487800
TGAAGGCAACCCCCTAATCTAGAA-------AGATGAACACTCTCGAAGATCTTTCGGCGACTATCGCCGTTGTGAAGTC
GTAGGAGGTCGCTGCAGCACAGTCAACGGTCACCCCCACTGGTCGACCGGATCTTGATCACCACCATCTAAGGCGTGGAC
TGTATTGCTGTCGACCGCCTTCCGACAGAGAGCCAAACACACGTGGTCAACACTTCCCAGCCACCGCGGTCCACCTCCCA
GCAGAGAGCCTGACGCACGCCGGCCCTCCGGCA-CCAAATCTGACCGGATTTGGTCGGAGACCGGCCCGCACACAAAGGT
CCCAGCTCAACACCACCTAGCTCTCCATGGTGCCCCATCGGCGCCGCCGCAACCCCCCATCAGTCCCAAGCCACCGTCGG
GAGCAGGCACCGCCTCAACCACCCATCAGCCCCATGCCACCAGCGGGAGCAGGCGTGGCACCGCCTCAACCACCCATCAG
CCCCATGCCACCAGCGGGAGCAGGCGCGGCACCGCGCTGCTTTGGCCTAGATAGGGGTCGCGCCCCCGCACGCCTGGGGT
CCCTGCGCACTTAGCCGCCATGAGAGAGCGATGTGAGCCCCCGCCACCGCTATCGGCCGCTTGGGCTTAAC-AGGTGGCA
TCCTCCGGCTGCGAGGGAGGGGAGGAAGAGAGGAGCGGTGAGTCCGGCGGCTAGAGTTGGTTGCTCCTCCTGAGTCGGCC
GCGCGGGGAGGGACGCGGGGGTTGTTCTCGCGTGACGACAAAAAGACGGTCTAAGTGGTGAGATGAGCGCTGGGTTGCCA
ACCTAAA-------------------------------------------------------------------------
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---AAAATAAAACAACAAAATAGGAATTGGAAAGAGAGATGTGGTGTTCTGCTGCTATGGCCAGGGAAATCACAGATGTT
GCTTCGTAGCTCAGTACAAGTGTCATCGTACTCTCAATAAATTAAATGGTTTGTGTACTTGGTGCATCTGAATACAACCA
AC------------------------------------------------------------------------------
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----------------------------------------------------------------CACCCAAGTGTGAGCG
TACAAGTGAGGAGCTTCAGCGGGTCACATGACATCCCCTTCCCTTCCTTCCTTCCCCTCCTCCCTTCTCACTCCCCTGTC
TCTCACTCACCCACTC-GCGCCCGCGCACACAGAACGAGCC-AAGGAAGCAAGGAGGAATTGCCATTTCGGGAAAGGAGA
GGAGAATCAGATCGGGCAGATGGCCGCCGGCGACGTCGCC------------------AGCCTCGGCACTCGCCTAGCCG
TCTCCTTCCCCGCCGCATCCACCACCGTCGCCGACCTCAAGCGTGCGTATTTTCTTGCTTCTCTACCTTCTT--------
------GCTTGTCTACCGCCGGCTGGCTGGCTTTGCGATGGTT---------------------CAATCCTCCTGCCTCT
AGAACAAATCTTGGC--------TATTCCTCTCGGTTGCAAATCAAATCAGATCAATTCTT-TTCGGCCTGAGCTGACAA
AACCCCAATC-------------------------------------TTGGGTTAATTTCCTTTTT-----------TGG
TTTGTACCAGGCAGAGTGAGTCATGAGCACGCCGCATGTTTCCCCAACTTTGGCCAGATCGCCGTCCAATCCGTCAAGGT
A---------------CTGTCCAATCCATCACGGAAATTGGCTGATCCATCGATTTTA---ATTAACATGGCCGCTGTCC
CATGTTGAA----------TGCTGCTGC-----CTTGAGCAGGTTGACCAGGGAGGCGCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGATGCATTCCAGTTCCACGGGGCCAACGAAACCTGGCACCTCCAAGTAGACGCTCTGCCTCACCCTC
AGCATCTCGACCAAGGAATGGCCACCGAG---GGACACTCCAAGGATTC---CTCTGCTACTCACTCTGAACCAAGCTGT
GAGATGCTGGGTGACCAGGTTAAAGTTGAAGTTGGAGCGGACTCTGAACCAAGCTG------TGAGATGCTGCCTGATCA
GGTTAAAGTTGAAGTTAGAGCGGAGG---------------------------------AGACATTGGCAGCCAAGGGCA
AAAGAAGCAGCAACGGGGCTGATCCAAAGGGATCGAAGGAAGCAGAGGCCACATCAACAGAACAGAGGGCATGTGACAG-
--AAGGCTGCGGCCAAGGACTAGAGTTGGCAAAACACCCATCACTAAGGCGGTGAA------------------------
---------------------------------CAGCAGCGGCAGCTCGGAGTCGGAGGGAATGGACATCAACACCGTCG
GCGTCG---------ACGCGCCGCCGTCGCAGTTCGTCGTCATGCTCAAGGAATGCCACTTTGTCACCAAGAATGGGCAG
TACCTGGTGAGAGCGTCCC-T-ACTCT--ACTCGATCACA----CGCGCACTTTCGTCCCTGTAACTAACTCCGTGTCTC
CGTCGCCGCCGATCGAC----GCAGAACGTGCCGCGGGGGTTCAGCGTGGCGCATCGGTACGCGGAGAGGAAGAAGGTGC
TGCTGCGGATGGGAGGCGAGTCGTGGATGGTGAACCTGAAGCACGTCCACATTGTGCGTGGCAAGACCCGCACGTCCTTC
CGGTACGGGTGGCACCAGTTCTGCGTTGACAACCACCTCCGCGTCGGCGAGACATGCTTCTTCCGAGCGCTCGGCCAA--
-GGCGGCGGCGGCGACCGCCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGACGGCAGTTACGCCAGCTGATGTGTGTCCG
TCTATTGCATTGGC--ATAGCCGTCTCAAGCAGGGCTCTTATCTTAGACTGCAATG--CATTGCATTGTGGT---AGCCC
AATATTAATATGCA-------------------GTTTGCTCCTGCTTATATATATGTTTCGCTTAGATACGCTAGGTC-T
ATCAGGGTCCTCATTATCT----AACTAGCTTTGGCTGACAATCTGTTGTTCTAGGTTCGCGTGACAATGTATTGTTCAT
TTGTGCTAGCTCTATAGAATCTGAAAATGTGATTTCAATCTCTAGCATATGTCTTTCTTTTACTATGATTCTGAATTGCT
GTAGTTCACCCACAAAGGTCTTTCGTGAAGGCGAATAGTTCACCACCATGGGAAACGTAAATGTTGTTTATACACCTTTT
CATTTGTGAATGCTAGCAACAGGGTAAATTAAAAGTTTGACATCAACAAACAATGTCTTGCATAGGATTTGTTGTTGTGT
GCAAAATTAGGAAGAACTAGAAGGGTTGGGTGCACTTTGCTGTTGTTGTTGGGTTTCCTAAAAAAAACTATGTTAAATAT
AAGGTTTATTACTTTTTTGAGAAGTCAAATCTTTTAAATTTGATCAAATTTGTAGAGAAATATATCAAAATCCATAATAT
CAAATCGGTATTTTTAGATTCCATGTAATGAATTTCCATACTATTTTTGTTTAATATTGTGGATGTCGATATTTTTTCCT
TGAACTTGGTCAAAGTTAAAGAAATTTGACTTTCTAAAAATCTAATACCCCTTATATTTTGGAACTGATGAAATATTTAG
TTTGGTAGGTGGGGGAGATGATAGAGTGTGTTTTGGTTTTAGAGAAACAGGGAGGTTTTCCACGGTTCCATTTGCTCAGA
TGAAACCATCAAGTCATAAGTGTGTTTTATTTTTGTTTATAATGCGGTGATTTGGTGGGCCTTTTGTGGTGTGATTCCGT
GTTATCCGCTAACCAACCTATATTTATATGAAAAAAATTCATTGTCGGTGGTTGCATGTAC
>chr2D_1
TGAGGGCAACCCCCGAATCTAGAAAGATCAGAGATGAACACTCCCGAAGATCTTTCGGCGACTACCGCTATTGTGAAGTC
GTAGGAGGTTGTTGCAGGACAGTCACA-GTCGCCCCCACTGGCCGGCTGGATCTTGATCACCACCACC-AAGGTGTGGAC
CGTATTGCTGCCGACCGCCTGCCAACAGAGAGCCCAACACACGTGGTCAATACTTCACAGCCGCCGCAGTCCACCTACCA
GCAGAAAGCCTGGCGCACGACGGCCCTCCGCGCGCCAAATCTGACCGGATCTGGTCAAAGACCGGCCCGCGCACAGAAGT
CCCAGCTCAACACCACCTAGCTCTCCATGGTGGCCCATCGGCGCCGCCGCAACCCCCCATCAGTCCCAAGCCACCGTCGG
GAGCAGGCACCGCCTCAACCACCCATCAGCCCC-----------------------------------------------
----ATGCCACCGATGGGAGCAGGCGCGGCACCACGCTGCTTTGGCCTAGATAGGGGTCGCACCCCCGCACGCCTGGGGG
CCCTGCGCACTTAGCCGCCATGAGAGAGCGATGTGAGCCCCCGCCACCGTTGTCGGCCGCCCGGGCTTAACGAAGTGGCA
TCCTCCGGCTACAAGGG----GAGGAAGAGAGGAGCGGTGAGTCCGGCGGCTAGAGTTGGTTGCTCCTCCCGAGTCGGCC
GTGCGGGGCGCGACGCGGGGGTTGTTCTCGCATGACGACAAAAAGACGGTCTAAGTGGTGAGAT-AGCGCTGGGTTGCAA
ACCC-AA-------------------------------------------------------------------------
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---AAAATAAAAGAACAAAATAGGAATTGGAAAGAGAGATGTGGTGTTCTGCTGCTATGGCCAAGGAAATCACAGATGTT
GCTTCGTAGCTCAGTACAAGTGTCATTGTACTCTCATTAAATTAAATGGTTTGTGTACTTGGTGCATCTGAATACGAAAA
TTCTAGAGCAACGGGGTAATATGGAGGGTTTACGGGATCTCTTAACTAACTAAACCTCACACCCCCTCCCCCCCACCCCC
CGCGATTTTCAAGGGGTGTGGGCCCTCCACTCCCTATTCTTCCAATCACTTTATCCCACCTAAGCACCTGGGAAATACCC
TTTGGCTCTCGCATGTATATACACCCTATATGGGGTTTTTTTAATAATTAAACAAAAAGTCAAAGTACTTCAAAATTATT
TTTGGATTAAACTTGACTTACTTGTGCACTAGTATATAAATTTTCACAAAAAAACCTACGTTGACTTCACAGCGAAAAAG
ACAAAATTTGTTTGCTATTATAGGTCACTATTCATGCTATTTTGACCAAAAATTTGTCTTTTTTGAAAAGAAGTCAAAGA
GAAATTTTCTTTTTGTGAAACTTTTCTCACTAATACAATGAAAGATCAAGTTTATTTTAAAAATATTTTCAGAAATTTTT
GACTTTTTGTTGAATTGCTATTTTTCTTCTATATAGGGTACATATGTATCCACGAACCAAAAGTTCCCCTCCCTAAGCAC
CTTCGTAAAGTCAGTAAAAACTTGCCCGTGCGTGTATCATTGCTCATCTGAATACAACCAACCACACCCAAGTGTGAGCG
TACAAGTGAGGAGCTTCAGCGGGTCACATGACATCCCCCTCCCTTCCTTCCTC-----CCTCCCTTCTCACTCCCCTGTC
GCTCACTCACCCACTC-GCGCCCGCGCACACAGAACTAGCC-AAGGAAGCGGAGAGGAATTGCCATTTCGGGAAAGGAGA
GGGGAATCAGATCGGGCAGATGGCCGCCGGCGACGTCGCAACCGTCTTCCTGGAGATGAGCCTCGGCACTCGCCTAGCCG
TCTCCTTCCCCGCCGCATCAACCACCGTCGCCGACCTCAAGCGTGCGTATTTTCTTGCTTCTGTACCTTCTT--------
------GCTTGCCTACCGCCGGCTGGCTGGCTTTGCGATGGTT---------------------CAATCCTCTTGCCTCA
AGAACAAATCTTGTC--------TCTTTCTCTCGGTTGCAAATCAAATCAGATCGATTCGT-CTGGGCCTGAGCTGACAA
AACCCCAATC-------------------------------------TTGGGTTAATTTCCTTTTT-----------TGG
TTTGTACCAGGCAGAGTGAGCCATGAGCACGCCGCATGTTTCCCCAACTATGGCCAGATCGCCGTCCAGTCCGTCAAGGT
A---------------CTGTCCAATCCATCACGGAAATTGGCCGATCCATCGATTTTACTAATTAACATGCCCGCTGATC
CATGTTGAA----------TGCTGCTGC-----CTTGAGCAGGTCGAGCAGGGAGGCTCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGACGCGTTCCAGTTCCACGGGGCCAACGAAACCTGGCACCTCCAAGTAGACGCTCTGCCTCACCCTC
AGCATCTCGGCCAAGGAATGGCCACCGAG---GGACACTCCAAGGATTC---CTCTGCTGCTCACTCTGAACCAAGCTGT
GAGATGCTGGCTGACCAGGTTAAAGTTGAAGTTGGAGCGGACTCTGAACCAAGCTG------TGAGATGCTGACTGATCA
GGTTAAAGTTGAAGTTGGAGCGGAGG---------------------------------AGCCATTGTCAGCCAAGGGCA
AAAGGAGCAGCAACGGGACTGATCCGAAGGGGTCGAAGGAAGCAGAGGCCACATCAACAGAACAGGGGGCATGTGAGAGG
AAAAGGCTGCGGCCAAGGACCAGAGTTGGCAAAACACCCATCACCAAGGCGGCGAA------------------------
---------------------------------CAGCAGCGGCAGCTCGGAGTCGGAGGAGATGGACGTCAACACCGTCG
GCGTCG---------ACGCGCCGCCGTCGCAGTTCGTCGTCATGCTCAAGGAATGCCACTTTGTCACCAAGAACGGGCAG
TACCTGGTGAGAGCGTCCC-T-ACTCT--ACTCGATCACA----CGCGCACTTTCGTCCTTGTAACTAACTCCGTGTCTC
CGTCGCCGCCGATCGAC----GCAGAACGTGCCGCGGGAGTTCAGCGTGGCGCATGGGTACGCGGAGAGGAAGAAGGTGC
TGCTGCGGATGGGGGGCGAGTCGTGGACGGTGAACCTGAAGCACGCCCACAATGTGCGTGGCAAGGCCCGCACGTCGTTC
CGGTACGGGTGGCACCAGTTCTGCGTCGACAACCACCTCCGCGTCGGCGAGACATGCTTCTTCCGAGCGCTCGGCCAA--
-GGCG---GCGGCGACCGCCATGTGCTCAAGGTGGAGGTGCGCAGGCTGGACGGCAGCTACGCCAGCTGATATGCCTCTG
TCCGTTGCATCGGC--ATAGCCGTCTCAAGCAGGGCTCTTATCTTAGACTGCAATG--CATTGCATTGTGGT---AGCCC
AATATTAATATGCA-------------------GTTTGCTCCTTTATAC-TCTATGTTTCGCTTGCATATGCTAGTTTTT
ATCAACCTCCTCATTATCTAATTAATTAGCTTTGGCTGACAATTTACTGCGCTAGCTTTGTGTGACAATGTATTGTGCAT
TTGTGCTAG--CTATAGAATCTGAAAATGTGATCTCAATCTC--------------------------------------
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>chr2A_516
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-------------------------------------------GGCCTACATAGGGGTCGCGCCCCCGCACGCTTGGGGA
CCCTGCACACTTAGCCGCCATGAGAGAGCGATGTGAGCACCTGCCACCGCTATCGGTTGCCCGGGCTTAACCAGGTGCCA
TCCTCCGTCTGCAAGGGAGGGGAGGAAGAGAGGAGCGGTGAGTCCGACGGCTAGAGTTGGTTGCTCCTCCCGAGTCGGCC
GCGCGGGGAGCGACGCGGGGGTTGTTCTCGCGTGACGACAAAAAGACGGTCTATGTGGTGAGATGAGCGCTGGGTTGCCA
ACCT-AAAAAAATGGAAAAAAAAATCTGTGCGTACCGGGTGTAAACTGCTCTCCCTGCGTATCCTGTGTGAGATGACGCC
ACGTGGTCCACCTCGCCATCCGACGATCCCTCGGCTCGAGCACCCCTTCTCGGCTCCAGGAAACAAGCCCGCAACCTCTC
GAACTTCGGCTCGGCTGGACTGGGCACACGATCCCTACCAATCTGGACTAGAGTCAGATTCAGGCGCCGCCGCATCCCTT
GGCGCAGTCGCCGCCGCCGCCGCCGCAGTCGTCTCCGTCGTACGCCACCGGCTGATCATTGGCTTCCACCATCATCTGCT
TCGTCCCCCGCCCGCCCTCGTCCTACACTGGATAGAGGGAGTGCGGCCGGCAGCCAGACGACGCAGGTATGCCTCCGATT
CCCTTTCCCTTTCTCTTCTGCTCGCCGCTGCTCCCCTTGTCTCATGTTAATTGATTTTTGTTTCTAATGTCAATCTATTT
CACTCAAAAAAAATGTCAATCTATTTCGTTCTAGCAGAAGTGGTCAGGAGTAACATTTAATTAGTCACTGTTTAGTACGT
TAGCTGTTTGGAATCGTTGGTGTGAGCAGAACCACCTTGATGATGTGTGACAACGCAAAGATTAATATTGTCTCACCTTG
GACAAAGTCTCTTCCACGTTTGTCACTTGTGAAGCTGCGATGTCATGGATAGCACATCTGTATACTTCACTGTCTAACTG
AACAAACTTACAAATTCATTTTTTGCAGAAAAAATTGGGAACCACTTCAGCATTGGAGAACAGGAGACTGACAGGAAACC
AGAGATGATGCAATCTTTCCTGATTGCTTCTTGTTCGACTACATCCCCGAGGCGTGGGCTATGGTTTTGTCTAATTCACG
GGGTGTGGGCTATGGTTTGATAATCTAAGATCACTTGGGATCTATACAAGCAGCCAGAAGGGCAAATGGAAATAGCATCA
GATTGCTTGTTGCTGATCAACAAGATGAAGAGCGCAGAGCAAGACCGATCCCATACTAGCTAGCATCAGAACTGATGATA
TCATATGTAAACCGTGAAATTTGTTCTGTAGCTGTCGTCATGTAAATATGTCATGTACTGAAGGAGCTCATGTTTTGGCA
AAATGAACCAAACATGATGTAGCTTCCTGCTTGTATAATGAGTACCCTGAGATTGTGAGGACCAATTCATGTAAACAACA
GGATTTTAAATATCTATCTGATTTCTTGCCAAAAATCTGCATGTGTTATCTGATGTCGCCATAAATCTGTAGTTAACTTT
TTTTATTGTTTCTCTAGTTTCTCTGATTTTCTATTCAACTGTAGCAAAGATGCTACCTCTTTTTGTGTAGGCCTAAACTT
CATATGAAGTCAGGCTAATTTTTTACTATGAAATCTGAGAACTTTTTTAGCAAGGCAATTTGGAAAATACTTATATTGCA
AATGAATCAGCAATCCCAAAAATTTGATACTTTACGACAGTTTTGCCTTTGAATAGATACAACTTTATAGTTGATGATGT
TTGCAGGGAAAAACATATAGCTTATGAAAACCTTTGCAACAGGGAGGCTACTCAATCTTTCTGCGCGCAGTATGTTCAAT
AGCACTAAATTCCTGGTAGAAATCTTTGTCTTCCTTCGAGGCAATGGTGTCAGATTCCGCCATGGCCACTCCCAACCTTC
TCCCCGGTAGTGCTGCTTCAGATTGCGGCAGAATGGCCCGTGTCGGCCGCGGCTGTCACTCCGGCCCGAACTGATCATAG
GATGGAGATGGAGAGGACGCGTTCGGACGCCCGGTCGAGATGTTTACCGTTCCGTTCGCTGCAGTAAGCGTTGAGCCGGC
GAACTGGCCACTAGTCCCATCACGTAGATGTGTTCTGGTCGCTCGGCCATGAGAAATTCAGAATGGAATGGCTGCTTCCC
TGGCTGCATCGAGGAAGCAGAAGCTAGCAATCTTCCATGCGTAACTGACGGGAGCCGGAATCGTACGTAGGAGTACATGG
CAAGTTTTGGAGCCGAACGCAGGGGCTGCCGAGCCGAGAACCAACAAACCGAGCATCTGAGCAGTGAATCGTCGGATGGC
GAGATGGACCACGTGGCGTCATCTCACGCAGGGTATGCACGGGGCGAGATTTACAGCCCGCACGCACGGAATTTTTTTCC
AAAAAAATAAACCAACAAAATAGGAACTGGAAAGAGAGATGTGGTGTTCTGCTGCTATGGCCAAGGAAATCACAGATGTT
GCT---TAGCTCAGTACAAGTGTCATTGTTCTCTCAACAAATAAAATGGTCTGTGTATTTGGTGCATCTGAATACAACCA
AC------------------------------------------------------------------------------
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----------------------------------------------------------------CA-CCAAGTGTGAGCG
TACAAGTGAGGAGCTTCAGCGGGTCACATGACATCCCCTTC-----------C-----CCTCCCTCCGCACTCCCCTGTC
TCTCACTCACTCACTCAGCGCCCGCGCACACAGAACTAGCC-AAGGAAGCGAAGAGGAATTGCCATTTCGGGAAAGGAGA
GGAGAATCAGATCGGGCAGATGGCCGCCGGCGACGTCGCCACCGTCTTCCTGGAGATGAGCCTCGGCACCCGCCTCGCCG
TCTCATTCCCCGCCGCATCCACCACCGTCGCCGACCTCAAGCGTGCGTATTTTCTTGCTTCTGTACCTTCTTTTTGAGCT
GTTCTTGCTTGTCCACGGCCGGCTGGCTGGCTTTGCGATGGTT---------------------CAATCCTCTTGCCTCT
AGAACAAATCTTGGC--------TACTTCTCTCGGTTGCAAATCAAATCAGATCAATTCGT-TTCGGCCTGAGCTGACAA
AACCCCAATC-------------------------------------TTGGGTTAATTTCCTTTTT-----------TTG
TTTGTACCAGGCAGAGTGAGCCATGAGCACGCCGCATGTTTCCCCAACTTTGGCCAGATCGCCGTCCAATCCGTCAAGGT
A---------------CTGTCCAATCCATCGTAGAAATTAGCTGATCCATCGATTTTA---A----CATGGCAACTGATC
CATGTTGAA----------TGCTGCTGC-----CTTGAGCAGGTCGACCAGGGAGGCTCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGATGCATTCCAGTTCCACGGGGCCAACGAAACCTGGCACCTCCAAGTAGATGCTCTGCCTCACGCTC
AGCATCTCGACCAAGGAATGGCCACCGAG---GGACACTCCAAGGATTC---CTCTGCTACTCACTCTGAACCTAGCTGT
GAGATGCTGGCTGATCAGGTGAAGGTTGAAGTTGGAGCGGACTCTGAACCAAGCTG------TGAGATGCTGACTGATCA
GCTTAAAGTTGAAGTTGGAGCGGAGG---------------------------------AGCCATTGGCAGCCAAGGGCG
AGAGAAGCAGCAACGGGGCTGATCCGAAGGGATCGAAGGAAGCAGAGGCCACATCAACAGAACAGGGGGCATGTGAGAGG
AAAAGGCTGCGGCCAAGGACCAGAGCTGGCAAAACACCGGTCACTAAGGCGGCCAA------------------------
---------------------------------CAGCAGCGGCAGCTCGGAGTCGGAGGAGATGGACATCAACACCGTCG
GCGTCT---------ACGCGCCGCCGTCGCAGTTCGTCGTCATGCTCAAGGAGTGCCACTTTGTCACCAAGAACGGGCAG
TACCTGGTGAGAGCGTCCCTT-ACTCT--GTTCGATCACA----CGCGCACTTTCGTCCTTGTAAGTTGTAACTAA-CTC
CGTCGCCGCCGATCGAC----GCAGAACGTGCCGCGGGAGTTCAGCCTGGCGCATGGGTACGCGGAGAGGAAGAAGGTGC
TGCTGCGGATGGGGGGCGAGTCGTGGACGGTGAACCTGAAGAACGTCCACAATGTGCGTCGCAAGGCCCGCACGTCGTTC
CGGTACGGGTGGCACCAGTTCTGCGTCGACAACCACCTCCGCGTCGGCGAGACCTGCTTCTTCCGAGCGCTCGGCCAAGG
CGGCG---GCGGCGACCGCCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGATGGCAGCTACGCCAGCTGATGTGCCTCCG
TCCGTTGCATCAGCATATAGCCGTCTCAAGCACGGCTCTTATCTTAGAGTGCAATG--CGTTGCATTGTGGT---ACCCC
AATATCAATATGCA-------------------GTTT----------------------CGCTTGGATATGCTAGTTTTC
ATCAACCTCCTCATTATCT----AATTAGCTTTGGCTGACGAATTATCGTGCTAGCTTCGTGTGACAATGTATTGTGCAT
TTGTGCTAG--CTATAGAATCTGAAAATGTGATCTCAATCTTTACAT---------------------------------
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>chr5B_1009
CCCATCCCTTC---------------------------------------------------------------------
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---------------------------------------------CCTCCCCTCCCTTCCTCACTCCTCGGCCTCCT--C
TCTCTCCCACTCACTC-ACGCGCGCGCACACGGAGCTAGCCAAAGGAAGGGGAGAGGAATTGCCATTTCGGGAAGTAAAA
GGGGAACC----------GATGGCCGCCGGCGACGTCGCGACGGTGTTCCTCGAGATGAGCCTCGGCACCCGCCTCGCCG
TCTCCTTCCCCGCGTCGTCCACCACCGTCGCCGATCTCAAGCGTACGTACCATTTTC---------------TTTGAGCT
GTTCTTGCTTGTCTAC------CTGGCTGGCTGCTTGGCCGGCTTCAAGCTACGACGAATGAACCAATCCTCCTGCCTCT
AGAACAGATCTTGGCATTTTAATTCTTTCTCTTGGTTGCAATTGCAAATCGAGTCGAATCAATTCGGCCTGAGCTGACAA
AACCCCAATCCTCTTCTTCTTCTTTCTTGCGGCGAAAAACCCCAATCTTCAATTAATGTTCTTTTTCGGGTGTGGATTGG
TTTGTACCAGGCATAGTGAGCCACGAGCACGCCGCATCTTTTCCCCACCTTGGCCAGATCGCCGTCCAATCCATCAAGGT
ATGCTT----GCATCACTGTCCAATTCATCATGGAATTCGTCCGATCCATGAATTTTA---A----CATGGCCGCTC-CG
CTGATCAATGTTGCTGCTCTGCTGCTGC-----CTTGAGCAGGTCGACCAGGGAGGCTCGTGGTTCCACCTCGCCGACTC
CATGGCCATCCGGGATACTTTCCGGTTCCAAGGGATCAACGAACGCTGGCACCTGCAGGTAGACGCAT---------CTC
TGCAAGTTGACCAAGAGATGGTCACCCAG---GGGCACAGCGGCGGCGCAAACTCTGCAAATCACTCTGCACCTGCGCCT
GGTCGTCGTCATGGATACGAGGGGTCGTCGAGCAGGAGGTGCCGCAAGGCATCAAGCTCTGATGAGATGCTGCCTGATCA
GGTTGAAGATGAAGTTGAAGT---------------TGAAGCTGAAGCTCAAGTCAAGCAACCATTGCCAGCCAAGGGCG
AAAGAAGCAGCGACGGGGCAGTAAAAGAC---------------------------ACAGAACAGGGGGCATGGGGGAG-
--AAGGCTGCGGCCGAGGACTCAAGTTACTAAAACACCAATTACTTTGTCAAGCAGCAGCAGCAGCAGCAGCTCAGACTC
GGAGGAAACGGACACCAACACCGTCG------------GCGGCAGCTCCGAGTCGGAGGAAATGGACATCAACACCGTCG
ACGCGCCGGCGCCGCACACGCCGACGCCGCAGTTCGTCGTCGAGCTCAAGAAATGCCACTTTGTGAAGCAGAATGGGCAG
TACCTGGTGAGAGCGTCTCTTCACTCT--ACTCGATCACATGCGCGCGCACTTTCCTTCTTCTAACAAACTCCTTCCGCC
-TCCGCCTC----CGAC----GCAGAACGTGCCGATGGAGTTCGGCGTTGTGCACCGGTACACCGAGAAGAAGAAGGTGC
TGCTGCGGATGGGGGGCGAGTCGTGGGCCGTCAACCTCAAGCACGGCCTCACGCCCACCGGCAGGCCCCGCACGTCCCTC
CGGTACGGGTGGGACCAGTTCCGCGTCGACAACCGCCTCCGCGCGGGCGAGACCTGCTTCTTCCGAGCCCTCCCCGGGGA
CGACG---GCGGCGACCACCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGACGGCAGCTACGCAACCTGATGTGCCTCCA
TTGATTCGTT---------GCCATCTCAAGGAC--CTCCGGAACTAGAATGCAATGCACATTGCATCGTCGTAGTAGCTC
AAGATTAATATGGTCATTGCTCCTTCTACTTGTGTTT----------------------CGCTTGGAT------------
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>chr5A_1388
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
AACCCCAATC-------------------------------------TTGATTTAATTTCCTTGTT-----------CGG
GT--TACCAGGCAGAGTGAGCCATGAGCACGCCGCATGTTTCCCCCACCTTGGCCAGATCGCCGTCCAATCCATCAAGGT
ATGGACGCATCACTATCCATCCAATTCATCAAGGAATTTGGCTGATCCGTCAACTTTA---A----CATGGCCGCG--CG
CTGATCAATGTTGCTGCTGCTGCTGTCTTGACTCTTGAGCAGATCGAGCACGGAAGGTCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGACGCTTTCCTGTTCCAAGGGATCAACGAACGCTGGCACCTGCAGGTAGACGCAT---------CTC
TGCAAGTTGACCAAGGGATGGTCACCCAG---GGACACAGCGGCGGCGCAGACTCTGCAAATCACTCTGCACCTGCGCCT
GGTCGTGGCCATGGATGCGAGGGGTCGTCGAGCAGGAGGTGCCGCAAGACATCAAGCTCTGATGAGATGCTGCCTGATCA
GGTTGAAGCTGAAGCTCAAGCTCAAGTCACCCCCAGTGAAAGGG------------AGCAGCCATTGACAGGCAAGGGCG
AAGGAAGCAGCGACGGGGCAGAACAAGAC---------------------------AGAGAGCAGGGGGCATGGGGGAG-
--AAGGCTGCGGCCGAGGACCCATGTTGGTAAAACACCAATTACTTTGTCAAGCGGCAGCAGCAGCAGC---TCAGAGTC
GGAGGAAATGGACACCAACACCGTCGGCGGCGGCAGCAGCAGCAGCTCCGAGTCGGAGGAAATGGACATCAACACCGTCG
---TCG---------ACGCGCCGGCGCCGCAGTTCGTCGTCGAGCTCAAGAAATGCCACTTTGTCAAGCAGAATGGGCAG
TACCTGGTGAG--CGTCTCTTCACTCTCTACTCGATCCCA----CGCGCAGTTCCGTTCTTCTGACCAACTCCTTCCGTC
-TCCGCCTCCGACGGAC----GCAGAACGTGCCGATGGAGTTCGGCATTGTGCACCGGTACACGGAGAAGAAGAAGGTGC
TGCTGCGGATGGGGGGCGACTCGTGGGCCGTCAGCCTGAAGCACGGCCTTACGTCTACCGGCAGGCCCCGCACGTCCCTC
CGGTACGGGTGGCAGCAGTTCCGCGTCGACAACCGCCTCCGCGTGGGCGAGACCTGCTTCTTCCGAGCCCTCCCCGGGGA
CGGCG---GCGGCGATCACCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGACGGCAGCTACGCCACCTGACGTGCCTCCA
TTGATCCGTT---------GCCATCTCAAGGAC--CTCTTAAATTAGAGTGCAATG--CATTGCATCGTCGTTGTGGCCC
AAGATTAATACGGACGTTGCTCCTTCTACTTGTGTTT----------------------CGCTTGGATGCGC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_1388
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
AACCCCAATC-------------------------------------TTGATTTAATTGCCTTTTT-----------CGG
AT--TACCAGGCAGAGTGAGCCATGAGCACGCCGCATGTTTCCCCCACCTTGGCCAGATCGCCGTCCAATCCATCAAGGT
ATGGACGCGCGCATCACTGTCCAATTCATCAACGAATTTGGCTGATCCATCAACTTTA---A----CATGGCCGCTGTCG
CTGATCAATGTTGCTGCTCTGCTGCTGC-----CTTGAGCAGATCGAGCACGGAGGGTCGTGGTTCCACCTCGCCGACTC
CATGGCCGTCCGGGACGCTTTCCTGTTCCAAGGGATCAACGAACGCTGGCACCTGCAGGTGGACGCAT---------CTC
CGCAAGTTGACCAAGGGATGGTCACCCAGCAGGGGCACAGCGGCGGCGCAGACTCTGCAAATCACTCTGCACCTGCGCCT
GGTCGTGGCCATGGATGCGGGGGGTCGTCGAGCAGGAGGTGCGGCAAGGCATCAAGCTCTGATGAGATGCTGCCTGATCA
GGCTGAAGTTGAAGTTGAAGC---------------TGAAAGGG------------AGCAACCATTGACAGGCAAGGGCG
AAGGAAGCAGCAACGGGGCAGAACAAGAC---------------------------AGAGAGCAGGGGGCATGGGGGAG-
--AAGGCTGCGGCCGAGGACTCAAGCTGGTAAAACACCAATTACTTTGTCAAGCGGCAGCAGC---------TCAGAGTC
GGAGGAAATGGACACCAACACCGTCGGCGGCGGCAGCAGCAGCAGCTCGGAGTCGGAGGAGATGGACAACAACAC---CG
---TCG---------ACGCGCCGGCGCCGCAGTTCGTCGTCGAGCTCAAGAAATGCCACTTTGTGAAGCAGAATGGGCAG
TACCTGGTGAG--CGTCTCTTCACTCT--ACTCGATCCCA----CGCGCACTTTCGTTCTTCTGAGTTCTGACTAACTGC
TTCCGCATCCGATCGACGCATGCAGAACGTGCCCATGGAGTTCGGCGTTGTGCACCGGTACACCGAGAAGAAGAAGGTGC
TGCTGCGGATGGGGGGCGAGTCGTGGGCCGTCAACCTCAAGCACGGCCTCACGCCCACCGGCAGGCCCCGCACGTCCCTC
CGGTACGGGTGGCAGCAGTTCCGCGTCGACAACCGCCTCCGCGTGGGCGAGACCTGCTTCTTCCGAGCCCTCCCCGGGGA
CGACG---ACGGCGACCACCATGTGCTCAAGGTGGAGGTGCGCAGGCTAGACGGCAGCTACGCAACCTGATGTG------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>SNPs
--------------S----------------------------S--------------------S---SS----------
---------S-S-----S-------SSS---S----------S--S-S------------------S-S----S------
S---------S---------S--S----------S---------------S-----S-----S----S--------S---
-----S------S------S----------SSS-----------------S-----SS------------S----S-S--
--------------------------------S-----------------------------------------------
---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------SSS------------------S---------------------------------------------S
------------------------------------------------------------SS------------------
------------S---------------------------------------------------------S---------
----------S---------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------S-------------S-S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------------S-------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
----------------S--------------------------------------------S------------------
-----------------------------------------------------------------S----------S---
----------------------------------------------------S---------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------S-----------------------------------------
-------------S-------------S-----------------------S-------------S--------------
--------------------------S-----------------------------------------------------
-----SSS-------------------------------------------------S----------------SS----
--S-------S---------------------------------------------------------------------
-------------------------------------------SSS--SS-S------------S----------S-S--
----SSS------------------S-----------------S-S----S----S----S---------------S---
---------SS----------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------CACCTAGCTCTCCATGGTGC-----------------------------------------------
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-------------------------------------------------------------
>reverse_4220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TTTTCGGCCTGAGCTGACAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_3024
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGTTCTGCTGCTATGGCCAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_5578
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------TTACGCCAGCTGATGTGTGT---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_5412
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--------------------------------AACCTGAAGCACGTCCACAT----------------------------
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-------------------------------------------------------------
>reverse_6536
--------------------------------------------------------------------------------
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-------------------------------------------------------TGGGCCTTTTGTGGTGTGAT-----
-------------------------------------------------------------
