>input_sequence_48970
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-------------------------------------------------ATGGG----------AGAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAGCAAAATGCAGTACTACGCAG
GCGGTACCTCCTTTAACTCACCACATGCCGGACCTCATGGCCGTGACTGCTTCTGCATCAGCGGTCCCAAACACATAGTT
CAATCCGTTGACTGGTACGTATCGTAATATATTGTGGCAATATGGATGAACTAAGTGCAAAGTTGGGAGCTGAAATTTGT
CTCTTCTTTTTTGTGCGGAGAAATCTTCCGAGAAATTTGTCCGTTTTGTAACATGGAGAACC---AAGGTTTCCAAATAG
TCGACTGTGGGGTGGTCTTTTAGAGTGACACATGATTCAAGTAGCTAGGTCAAACGAAATTATTTCATTATAAGATTAGA
GAAGTACTCCCTCTGTAAGGACATATAACAGTGTTTAGATGACTAATACACTCTTATATTTCTATACGGAGACAATATAA
AATCTTTTA------TAATTGGATTCGTCGTTACAAAAGAAGTACA-TATATATTTTGCATGCATGCATGCATGAATGAA
TGAATTGTCGTTTAACAAACGGTGG----ATATATTTTCGTTTCAGGAGCAACGAGGAGCACCGCCGCTGCATCGCTGCT
TGCCTTGTGAAAGCTACTTACATCATGGAGGAGGACCGACCAAAGTGCAGGGTGTATGACATGGGATTGGCGCCGCTGTG
GTGGCAGAGCTTCCACTTCGAGCTGCGGGATCTGCTTAAGTGCGGCACTGAGAACGCGGACGAGTTCATCTTCGGCGCCA
TATTCGAGTACTGCCCCCCCGTGGGGTGCCAGCGCCACCCGTCCGCCCCAAACTATGTTTTCGCCCTGCGCGGCACCATG
CCTCGGCACCCAAAGTCGGTCCATGACCTGTACAACGACATCAAGGTCTTCCTCAGCGATCTGCCATGCTGCAGACGGAC
CCAGAAGGCGCGTCAGGCGGTGACCAACATGCTCATCCGCAAGGGCACGGAGCGGTGCGTGCTGTGGCTGGCGGGGCACT
CGCTGGGCGCGTCGCTGGCGCTGGAGGTGGGGCGGGACATGGCGGAGCAGCACCAGGCGTACCTGCCGACCTTCCTCTTC
AACCCGCCCAACGTGTCACCGGTGCCGGCCTTGAACCTCCTCAATGCTTCGGAGGTGGCGAAGAAGGACGTGTTCACGGG
GAGCTACCTCGTGAAGGCGGCGCTCGGGGCCACGGTCATGAGGTCCTACTGCACCCGCATGGAGAAAGTGTTCCAGCGCC
TCTCGCCGTGGGTGCCGGAGCTGTACGTGAACGAGAGGGACATCATTTGCCAGGGCTTCATCGACTACTTCGAGCAGCGG
CAGAAGGTGGAGGAGCGCATCGCCGGCGTCGGCAGGGCAGCCATGAAGTTGTCCTATCGCGACATGCTCTCCTCCCTCAT
CGGCAGCAGCAAGGAGCAGCCGCACCTCTTGCCGTCCGCGAGGCTGTGGAAGAACTCCAACACAACATTCGGCACACATG
GCCTCAAGCAGTGGTGGAGGCCGGACAGCGAGCTAAAGCTCAGCTGCAGGAAATTCACTTACCCCGGAGCATGA------
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-----------------------------------------------------------------
>chr6D_1_TraesCS6D01G352800
GTACAAACAAATCTGTCCAATATGTGTAATGTAGCAATGTGCAT---TTTGAAGATGAATACCCTCATGGTTTGTATTGA
AATAATGCTTAGTTTTATTTAATATGTATATTAAATGCTGATAAGTTCCTCCTAGATTTTGGTGGAAAAAAAGCTGGAAC
TGGTGGGAAACAAAAACT-TTAACAGGAAATAGCAATTACAAATTTCACGGGAAACAAAATTCAATTAAAATGCAGTAAT
ATTCCAGG-AGCCGGTGATAGCACGAACTGCCCCTGCAATGAGTTTCT-------------ACCTTTGAAAAGCAGGGGT
GGGCCGCATGCCCGGCTCCGCAAATGTGAATTCAACAGGGACCTGGATATCATTTATATA------ATAGATAGTGTC-T
TGTGCCAACAACTTTCTGGGTCTATCAAGTCAAGCAAAAAGATCTTTAGGCAAGTCAAGCAAAGTCAAGTCAATAAATGC
TTTTAGTGTTCGGCAGACGTCCACATATGAAAATGGCATCGGAGTTTTGCAACTTGC---TAGCTAC--TATGATCTTGT
CTATAAGCTTTTGCTTTGTTCTGTATTGATCGTT-GGAAGCCCGATA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ACACATTTTGTTATTCCAGTTTTCAGGTAGGAAAAATCTGTG
TATCAGTACGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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AATTAAAAAAATCCCTTGCCATTAATCCTTGTCCTA--------------------------------------------
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-----------------------------------ATGGATATGGACGTGGAGCGCATCCACTTTATTCGTATTCTCCTC
TTTTTTTCCCTCAGGGGCCATGATTCTTGGATTAATTATCGGACTCCAGGTGCATGATAGTGATCGATCCTCATATATTC
CCACGGATACATATGTGGAGTGGAGTCTCTTTATTTGTATTCTCTTCTCTTTTTTACATGGGTCATGATTCTTGGTTGAA
TTATTATTGGATTGGATTCCTAGTGCATGCTTTTGTTGCGCTTCTGCAGATGCGTGGTAATCCTAAAATCTGCAGGTTGC
CACGCGTGCATGTATGTATATATATGTGCCTCCTAGGGCTCGTCTCTTGATGGG----------AGAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAGCAAAATGCAGTACTACGCAG
GCGGTACCTCCTTTAACTCACCACATGCCGGACCTCATGGCCGTGACTGCTTCTGCATCAGCGGTCCCAAACACATAGTT
CAATCCGTTGACTGGTACGTATCGTAATATATTGTGGCAATATGGATGAACTAAGTGCAAAGTTGGGAGCTGAAATTTGT
CTCTTCTTTTTTGTGCGGAGAAATCTTCCGAGAAATTTGTCCGTTTTGTAACATGGAGAACC---AAGGTTTCCAAATAG
TCGACTGTGGGGTGGTCTTTTAGAGTGACACATGATTCAAGTAGCTAGGTCAAACGAAATTATTTCATTATAAGATTAGA
GAAGTACTCCCTCTGTAAGGACATATAACAGTGTTTAGATGACTAATACACTCTTATATTTCTATACGGAGACAATATAA
AATCTTTTA------TAATTGGATTCGTCGTTACAAAAGAAGTACA-TATATATTTTGCATGCATGCATGCATGAATGAA
TGAATTGTCGTTTAACAAACGGTGG----ATATATTTTCGTTTCAGGAGCAACGAGGAGCACCGCCGCTGCATCGCTGCT
TGCCTTGTGAAAGCTACTTACATCATGGAGGAGGACCGACCAAAGTGCAGGGTGTATGACATGGGATTGGCGCCGCTGTG
GTGGCAGAGCTTCCACTTCGAGCTGCGGGATCTGCTTAAGTGCGGCACTGAGAACGCGGACGAGTTCATCTTCGGCGCCA
TATTCGAGTACTGCCCCCCCGTGGGGTGCCAGCGCCACCCGTCCGCCCCAAACTATGTTTTCGCCCTGCGCGGCACCATG
CCTCGGCACCCAAAGTCGGTCCATGACCTGTACAACGACATCAAGGTCTTCCTCAGCGATCTGCCATGCTGCAGACGGAC
CCAGAAGGCGCGTCAGGCGGTGACCAACATGCTCATCCGCAAGGGCACGGAGCGGTGCGTGCTGTGGCTGGCGGGGCACT
CGCTGGGCGCGTCGCTGGCGCTGGAGGTGGGGCGGGACATGGCGGAGCAGCACCAGGCGTACCTGCCGACCTTCCTCTTC
AACCCGCCCAACGTGTCACCGGTGCCGGCCTTGAACCTCCTCAATGCTTCGGAGGTGGCGAAGAAGGACGTGTTCACGGG
GAGCTACCTCGTGAAGGCGGCGCTCGGGGCCACGGTCATGAGGTCCTACTGCACCCGCATGGAGAAAGTGTTCCAGCGCC
TCTCGCCGTGGGTGCCGGAGCTGTACGTGAACGAGAGGGACATCATTTGCCAGGGCTTCATCGACTACTTCGAGCAGCGG
CAGAAGGTGGAGGAGCGCATCGCCGGCGTCGGCAGGGCAGCCATGAAGTTGTCCTATCGCGACATGCTCTCCTCCCTCAT
CGGCAGCAGCAAGGAGCAGCCGCACCTCTTGCCGTCCGCGAGGCTGTGGAAGAACTCCAACACAACATTCGGCACACATG
GCCTCAAGCAGTGGTGGAGGCCGGACAGCGAGCTAAAGCTCAGCTGCAGGAAATTCACTTACCCCGGAGCATGAGATATC
TATGTTATATCATACGTTACATGT------------------------------------------GTGCCTAGCTACTC
CTACTTGTGTATCATACGTTATAATAGGACGTATCTGACCCGAGGAAGAGCATGTACGTGGAGTATCTGATCATACTAGA
TCAT----------------------------------TCAGGACAGGGCAGCAAGCCGATCGAGACCAATCTCAGGGAG
CGAGGGTTTATACCGGTTTGGACCTCTAGGGGGACGTCCAGTGTGGTCTGTATTGATGTGGTGAGGAGCGTGTTACTAGG
ATTTAGCAATGCGCACCATATATATGCTCCCTCATGACGGGGGTGATTACATGTTTGTAGGCGGGCAACCGCGTTAGTAA
CTAACGGGAGTCTATATCTAGTTACATCTATTTGTACATCAAGTAATTGAGATCGAGCTCTTTTACGGCGCATCATACTC
CCTCCAAGACCCAGTAGTATTAAATAATCTCAGCCGTACGTTGATTAGATGGGTAATTTTGTCAATTTTTGGTTCGTAAT
TTATAGACCCCCTCGCTGTGACTACTCGCGTCTGCGCTCATTGTTGCCCTCGCGGTCATCGCGGCATCCATCTATACTGT
ACGACAATCCATTATGTACTCCTTGTGTGCTCACTCATCCGCCCACGGTCATGATGTGTTGCCACCATGGTTCGTCCATC
CTTTGTTTTAGCTAGATTTGATTGCA-TTGTATGCATGTGTTGCTTGCGTGCAGCCGTCGACTTGTATACGTATACCACG
CGTGATCGCCGGGATCTATTGGTTGCTCATCATAA-CGTAGTGATGCATCTGAACTTGATCGATCTAAT-----------
----------------------CAAGGACGCTAGCTTGGCTAGCTTCGTGCATCTCGGCAAAAGGCATCGACCAGCGACC
GGCAAGGATCGATTGGGGCGAGTAAGGATGGCAATGGGTCGGGTTGAACAACATCAAATCCATATCCATATCCATGAAGA
CAGTCTTTGCCCGCCCATGAAAAAATCCACGGGTGAAAAATTATGTCCATGTCCAAACCTGATGG
>chr6A_1
GTACAAACAAATCTGTCCAATGTGTGTAATTTAGCAATAATGTGCACTTTGAAGATGAATATCCTCATGGTTTGTATTGA
AATAATGTTAGTTTTTATTTAATATGTATATTAAATGCTGATAAGTTCCTCCTAGATTT-GGTGAAAAAATAGTTGAAAC
TGGTGGGAAACAAAAACT-TTAACAGGAAATGGCAATTGCAAATTTCACGGGAAACAAAATTCAATTAAAATGCAGTAAT
ATTCCAGG-AGCCGGTGATAGCACGAACTGCCCCTGCGATGAGTTTCT-------------ACCTTTGAAAAGCAGGGGC
GGGCCGCATGCCCGGCTCTGCAAATTTGAATTCAACA-GGACCTGGATATCATTTATATA------ACAGATAGTGTCGT
GGTGCCAACAACTTTCTGGGTCTATCAAGTCAAGCAAAAAGATCTTTAGGCAAGTCAAGCAAAGTCAAGTCAATACATGC
TTTTTGTGTTCGGCAGACGTCCACATATGAAAATGGCATCGGAATTTTGCAACTTGC---TAGCTACTATATGATCTTGT
CTATAAGCTTT-GCTTTGTTCTGTACTGATCCCGGTCCCGGTTCATTAGATGCTCCTTTACATAAGTCATGGTCTCGGTT
CATTAGATGCTCGGGTAAAGAGAGATTCCCATGTTATTCCACACCTAACAAACCAAAAAATTCCATCAAAGGTCACGCTG
TTCCACACCTAACAAACCAGAAATTTGTATTTTTCCTGAATCATGATTTTGGTTTATTAGATATTCCTAAGATAATGGTA
CATGGAATGAGATCCCCGCCCTCTGCATCGTGCGGCGCACAATCGTTAGATCTCTGGCAAATTAAAATGGAAAGAGTCAT
GGGCAATCCCCATGCAGAATCAAAGAAAGGCAAACCGCACACCAGCCGAATAGCTAGAAAACAAGTACTCCCTCCGTAAA
CTAATATAAGAGCGTTTAGAACACTACTTTAGTAATCTAAACATTTTTATATTAGTTTACAAAGGGAGCAATAAACTCCT
GTAATTGGTACGTTCTTTCACTGGTAGCTGGTTGGCGATGTATCCCTCGACAATAATGTGTCTGTGTGGCTTCGACTCTA
AAGATCTACCGGCCAATATTCCATAGGCGTTCATCGGGGTATGGTGTATGTGCGTTCATGGTTGTAAGAGTGAGTATGCC
CACGTATATGTGAGCGCCTGCGACTGCACCATATATATTTCATAAAAATATCTTTGGCAATTAACTCCAACTATGTGTAG
CACCAGTGCTCCCCGACGGTGCCCTTCTGGTCGCAGCATCTATGATCATGAATGAAGACGGTTGAAAGTATAGATAACCT
ACATATATGGTTATAAATCTTTTTGTTGTCAAATTTTTGGTTAACAGGTAAATATATTCCTAGTACCTACAGGTACGAAA
GCAGAGCATATATGGATAGATAACGCTTAAATCTTGTCCGATACTTTTCCTCTCCCTTCCCCCATATGTATAGCTGATAA
TAAATGGATGCAGATACAGAGCCGATAATTTCAGATTATGGTGAATAATCCACTTTTAAAAATCATATAATACATATCTG
CAGGGTAATAGTAGTACCTTATTATTGTCCTTAGGGCTGAGAAAAAAAACGGAATAGATAAATCCCGAACTTTCGGAATT
TAAGCATGTAACCCCGAACGTTTTTTGATAGCAACTTTAGTTGCTGCAAGGTGGCAACTTTAGTTATTAACACGTGGCAA
CTTCCTTCCAGTTTGATTTTTTGTCAGAAAATTGCCATGTTTGTCAACATCGCCTTAAGTAAGGTTGCCATGAAAAGAGT
TCGGATTAGCAGGCTTAAATTCCGAACGTTCGGAACTTATTGAGGTCCAAAAAAAAGCTCAAAGCTCGCAAGCTAGACGA
GTAGCTCGTGACTCGGCTCAGCTCAAATCGACTCGAACTCGAAGAATAACGAGTCGAGCCGAGCTTTACTTTAAGACCGT
TTATAGACTTAGTTGAACAAGTCAATCTCAGGAGTACTCGTGTAACTCATTAGGCTTGGTACAAAAGATCAGCCACTCCC
AATTAAAAAAAAAGATCAGGCACTCAGCACCTTGCGTCCCAGGCGCACAACAAAAGGAGACTCATGCGTTACAAGGAAAT
TACAATTGTTTGGTGATGTACATGTTTAATATATACATAATCATTTTTATCATATTTGAGGGTTTTATATTCATATCTTT
AACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGTTATGCGAGTCGAGCCAATCTTGGGTTTGAGCTCGTTATAGTAA
CGAGTCGAGTCAAGCTAGCTTGTTAACGAAACGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGATATGGACGTGGAGCGCAGCCAATTT-TTCATATTCTCCTC
TATTTTTTTCTTAGGGGATGAATTATT-----------------------------------------------------
--------------------------------------------------------------------------------
----------ATTGGATTCCTAGTGCATGCTATTGTTGCGCATCTGCAGATGCGTGGTAATCCTAAAATCTGCAGGTTGC
CATGCGTGCATGTATGTATATATATGTGCCTCCTAGGCCTCGTCTCTCGGTGGGAGAGCAGAGCAGAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------AGAGCAAAATGCAGTACTACGCAG
GCGGTACCTCCTTTAACTCACCACATGCTGGAGCTCATGGCCGTGACTGCTTCTGCATCAGCGGTCCCAAACACATAGCT
CAATCCGTTGACTGGTACGTATCGTAATATATTGTGCCAATATGGATGAACTAAGTGCAAAGTTGGGAGCTGAAATTTG-
---------------------------------------TCCGTTTTGTAGCATGTAGAACCATTAAGGTTTCCAAATAG
TCCACCGTAGGGTGGTCCTTTAGAGTGACACATGATTCAAGTAACTAGGTCAAACGAAATTATTTCATTATAAGATTATA
CTAGAACT---------------------------------------------------------------ACAATATAA
AATCTTAGTATATAGTAATTGGATTCGTTGTTACAA---------AGTATATATTTTGCATGCATGCATG----AATGAA
TGAATTGTTGTTTAACAAACGGTGA----AT----TTTCGTTTCAGGAGCAACGAGGAGCACCGCCGTTGCATCGCGGCT
TGCCTTGTGAAAGCTACTTACATCATGGAGGAGGACCGGCCAAAGTGCAGGGTGTATGACATGGGGTTGGCGCCGCCGTG
GTGGCAGAGCTTCCACTTCGAGCTGCGGGATCTGCTCAAGTGCGGCACCGAGAACGCGGACGAGTTCATCTTCGGCGCCG
TATTCGAGTACTGCCCCCCCGCGGGGTGGCAGCGCCACCCGTCGGCCCCAAACTACGTTTTCGCCCTGCGCGGCACCATG
CCTCGGCACCCAAAGTCCGCCCACGACCTGTACAACGACATCAAGGTCTTCCTCAGCGACCTGCCATGCTGCAGACGGAC
CCAGAAGGCGCGTCAGGCGGTGGCCAACATGCTCATCCGTAAGGGCACGGAGCGCTGTGTGTTGTGGCTGGCGGGGCACT
CGCTGGGCGCGTCGCTGGCGCTGGAGGTGGGGCGGGACATGGCGGAGCAGCACCAGGCGTACCTGCCGACCTTCCTCTTC
AACCCGCCCAACGTGTCACCGATGCCGGCCTTCAACCTCCTCAACCCGTCGGAGGTGGCGAAGAAGGACGTGTTCACGGG
GAGCTACCTCGTGAAGGCGGCGCTCGGGGCCACGGTCATGAGGTCATACTGCACCCGCATGGAGAAAGTGTTCCAGCGCC
TCTCCCCGTGGGTGCCGGAGCTGTACGTGAACGAGAGGGACATCATTTGCCAGGGTTTCATCGACTACTTCGAGCAGCGG
CAGAAGGTGGAGGAGCGCATCGCTGGCGTCGGCAGGGCAGCCATGAAGCTGTCGTATCGCGACATGCTCTCCTCCCTCAT
CGGCAGCAGCAAGGAGCAGCCGCACCTCTTGCCGTCCGCGAGGCTGTGGAAGAACTCCAACACAACATTCGGCACGCACG
ACCTCATGCAGTGGTGGAGGCCGGACAGCGAGCTAAAGCTCAGCTGCAGGAAGTTCACCTACCCCAGAGCATGAGATATC
TATGTTATATTATACTCACTCTATCCTAAAATAAGTGTCTCAAGTTTAATAGTATTACCTAAACGCGTGCCTAGCTACTC
CTGCTTGTGTATCTCATGATATAACAGGACGTATCTGACCCGAGGAAGAGCATGTACATGGAGTATCTGATCATACTAGA
TCATCCTTGATAGTACATACATTGGGCAGATATTTAGTTCAGGACAGGGCAGCAAGCTGATCGAGACCAATCTCAGGGAG
CGAGGGTTTATACCAGTTCGGACCTCTCGGAGGACGTCCAGTGTGGTGTGTATTGATGTGGTGAGGAGCGTGTTGCTAGG
ATTTAGCAATGCGCACC----ATATGCTCCCTCATGACGGGG-TGGTTACATATTTGTAGGCGGACAACCGCCTTGGTAA
CTATCCGGAGTCTATATCTAGTTACATCTATTTGTACATCAAGTAATTGAGATC--------------------------
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-----------------------------------------------------------------
>chr6B_109
TAG-----------------------------------------------------------------------------
----------------------------------ATGCTGATAAGTTCCTCCTAGATTT-GGTGAAAAAATAGTTGAAAC
TGGTGGGAAACAAAAAAAATTAACATGACATAAAAGTTA-AAATTTCACGGGAAACAAAATTCAAT-AAAATGCAGTAAT
ATTGCAGGAAGCCGGTGATAGCACGAACTGGGTTAGGATCGTCTGCAATACTGTATGGTGCACCTTTGAAAAGCAGGGGT
GGGCCGCATGCCCGGTTCTGCAAATTTGAATTCAACA-GGACCTGGATATCATTTATATAGGAGTAATAGATAGTGGC-T
GGTGTCAACAACTTTCTGGGTCTATCAAGTCAAGCAAAAAGATCTTTAGGCAAGTCAAGCAAAGTCAAGTCAATAAATGC
TTTTTGTGTTCGGCAGGCGTCCACATATGAAAATGGCATCGGAATTTTGCAACTTGCTACTAGCTAC--TATGATCTTGT
CTATAAGCTTTTGCTTTGTTCTGTATTGATCGTTGGGAAGCCCGAGA---------------------------------
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--------------------------------------ACACATTTTTTTATTCCAATTTTCAGGTAGGAAAAATCTGTG
TATCAGTACGGA--------------------------------------------------------------------
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AATAAAAAATAAACCTTGCCATTAATCCCTGCCCTA--------------------------------------------
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-----------------------------------ATGGATATGGACGTGGAGCGCAGCCACGTTATTGGTATTCTCCTT
TTTTTTTC--TCAGGAGTCATGATTCATGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTGTG-
--------------------------------------------------------------------------------
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--TGTGTGTGTGTGTGTGTGTGTGTGTGCCTCCGAGGGCTCC---CTCAGTGGCAGAGCAGAGCAAAAGAGCAGTGCTAC
ACACGATACTGTACGCACGATTCATGCACGACAACAGATACCTGTCCGTCCATGCATGTAGCAGAGTCCAGCAGACCATT
TGATCCCGCATCGTTCATCTGTCGTGCATACTGTTGTCGTCCGCGCAGCAGTTCCGAGAGCAAAATGCAGTACTACGCAG
GCGGTACCTCGTTTAACTCGCCACATGCTGGACCTCATGGCCGTGACTGCTTCTGCATCAGCGGTCCCAAACACATAGCT
CAATCCGTTGACTGGTACGTATCGTAATATATTGTGGCAATATGGATGAACTAAGTGCAAAGTTGGGAGCTGAAATTTG-
---------------------------------------TCCGTTTTGTAACATGGAGAAGC---AAGGTTTCCAAATAG
TCGACTGCAGGATGGTCTTTTAGAGTGACACATGATCCAAGTAGCTAGGTCAAACGAAATTATTTCATTATAAGAT----
------------------------------------------------------------------------------AA
AATCTTATA------TAATTGGATTAGTTGTTACAGAAAAAGTAGAGTATATATTTTGCATGCATG------------AA
TGAATTGTCGTTTAACAAACGTACGGTGGAT----TTTCGTTTCAGGAGCAACGAGGAGCACCAGCGTTGCATCGCCGCT
TGCCTTGTGAAGGCTACTTACATCATGGAGGAGGACCGGCCAAAGTGCAGGGTGTATGACATGGGGTTGGCGCCGCCGTG
GTGGCAGAGCTTCCACTTCGAGCTGCGGGATCGTGT-------------------------------ATCTTCGGTGCCG
TATTCGAGTACTGCCCCCT-GCAGGGTGCCAGCGCCACCCGTCGGCCCCAAACTACGTTTACGCCCTGCGCGGCACCATG
CCTCGGCACCCAAAGTCAGCCCACGACCTGTACAACGACATCAAGGTCTTCCTCAGCGATCTGCCGTGTTGCAGACGGAC
CCAGAAGGTGCGTCAGGCGGTGGCCAACATGCTCATCCGCAAGGGCACGGAGCGGTGCGTGTTGTGGCTGGCGGGGCACT
CGCTGGGCGCGTCGCTGGCGCTGGAGGTGGGGCGGGACATGGCGGAGCAGCACCAGGCGTACCTGCCGACCTTCCTCTTC
AACCCGCCCAACGTGTCACCGATGCCGGCCTTGAACCTCCTCAACCCGTCGGAGGTGGCGAAGAAGGACGTGTTCACGGG
GAGCTACCTCGTGAAGGCGGCGCTCGGGGCCACAGTCATGAGGTCCTACTGCACTCGCATGGAGAAACTGTTCCAGCGCC
TGTCGCCATGGGTGCCGGAGCTGTACGTGAACGAGAGGGACATCATTTGTCAGGGCTTCATCGACTACTTCGAGCAGCGA
CAGAAGGTGGAGGAGCGCATAGGCGGCCTCGGCAGGGCAGCCATGAAGCTGTCCTATCGCGACATGCTCTCCTCCCTCAT
CGGCAGCAGCAAGGAGCAGCCGCACCTTTTGCCGTCCGCGAGGCTGTGGAAGAACTCCAACACAACATTCGGCACGCACG
ACCTCATGCAGTGGTGGAGGCCAGACAGCGACCTAAAGCTCAGCTGTAGGAAATTCATCTACCCCGGAGCATGAGATATC
TATGTTATAT------------------------------------------------------------CTAGCTACTC
CTACTTGTGTATCTCATGATAT---AGGACGTATCTGACCCGAGGAAGAGCATGTACGTGGAGTATGTGATCATACTAGA
CCATCCTTGATAGGGCGGATATCTAGTC-----------CAGGACAAGGCAGCAAGCCGATTGAGACCAATCTTAGGGAC
CGAGGGTTTATACCGGTTCGGACCCCTAGGGGGACGTCCAGTGTGGTGTGTATTGATGTGGCGAGGAGCGTGTTGCTAGG
ATTTAGCAATGCGCACC----ATATGCTCCCTCATGACGGGGGTGATTACATATTTGTAGGTGGACAACCGCCTTGGTAA
CTATCCGGAGTCTATATCTAGTTACATATATTTGTAAATCAAGTAATTGA------------------------------
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>chr5A_2919
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------------------------------------------------------GAGATCTTTTAAGGTGCATCATACTC
CCTTCAAGACGCAGTAGTATTAAATAATCTCAGCCGT----TGATTAGATGGATAATTTTGTCAATTTTTGGTTCGTAAT
TTATAGACCCCCTCGCTGTGACTACTCGCGTCTGCGCTCATTGTTGCCGTCGCGGTCATCGCGGCATCCGTTCTATACAG
TCCATC-------ATGTACTCCTTGTGTGCTCACTCATCCGCCCACGGTCATGATGTGTTGCCACCATGGTTCGTCCATC
CTTTGTTTTAGAGAGATTCGATTGCATTTGTATGCATGTGTTGCTTGTGTGGAGCCGTCGACTTGTATACGTATACCACG
CGTGATCGCTGGGATCTATTGGGTGCTCATCATAATCGTAGTAATGCATCTGAACTTGACCGATCTAATCAAGGACGCTA
GCTTTCCCTCAAAAATAATAATCAAGGACGCTAGCTTGGCTAGCTTCGTGCATCTCGGCAAAAGGCATCGACCAGCGACC
GGCAAGGATCGATTGGGGCGAG----------------------------------------------------------
-----------------------------------------------------------------
>SNPs
---------------------S--------S-------SSSSSS-----------------S------------------
-------S-SSS-----------------------------------------------S----S-----S--S--S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S------S-----------S------------------------------------------
S-------------------------------------------------------------------------------
----S--------------------------------------S------------------------------------
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-----------------------------------------------S--------S-----------------------
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-----------SS---------------S---------------------------------------------------
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---------------------------------------------------------S----------------------
--------S--------S-----------SS-SSS-SSSS-SSSSSSSSSSSSSSS--SSSSS-SSS-SSSSS-S-S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---------------------S---------S--------------------------------------
--S--------------------------------------------S-S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------------------------------S-
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------
--------S---------------------------------------------------------------------S-
SS--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
------S---------------------S---------S-----S-------------------------SSSS------
-------------------------------SSSS--------------------------------S--------S---
--------------------------------------S--------------------------S----------S---
------------------------------------S-----------S------------------------------S
---------------------S---------------------S-----------S------------------------
-----------------S-S---S--------------------------------------------------------
----------------------S--------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------S----------------------SS-S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------------------------------------------S--S-
S-----S---------------------------------------------------S---------------------
----------S----SSSSSS-S---------------------------------------------------------
-------------SS-S-S-----S-------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------------------S--------------------------S-----
-----------------SSSS-------------------------------S-----------S-------S--S----
---S-S---------------------------------------------------S-------S--S-----------
---S------S--------------------------SSSS-----------S---------------------------
------------------------------------------------S--------------------S-SSSSSSSSS
S-S-SSSSSSSSS-------------------------------------------------------------------
-----------SS-----S----------------------------S---S----------------------------
---------S------------S-------------------S----------------S--------------------
--------------------------------------------------------------------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3008
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----------------------------CCTCCTAGGGCTCGTCTCTT--------------------------------
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>reverse_4103
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----------------------ACCAACATGCTCATCCGCA---------------------------------------
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-----------------------------------------------------------------
>forward_3799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ACATCATGGAGGAGGACCGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_5765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTTTGCCCGCCCATGAAAAA-----------------------------------------
