>input_sequence_48959
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------ATGGGCATCCAGGTCGCGCCCCCCTCC------TCTTCTCTGGGCGCCGGATGCATGAGGCTGTCGAGGTCCCC
GTCGTCGTCGTCGCTGGCGACCTGGAGCGCCGGCATCGCCCGCCGGCGCGCCGGGCACGCGATGGTTACGCGCGCCCTCA
GCGCCAGCATCGACAGCGTCGGCAGCCACGGCGGGGATGACGAGGAGTTCCTGAGGAGGATCCAGGAGCTCGCTGTCGGG
CTGCACCCGGGCGCCGGCGGCTGCGGCTGGCCGGCGAGCGTAGAGCGGAGCGCCAGCAGCGTCGGTCTGCCGCTGTCGCT
CAGGATGCTCAAGCGCAAGAAGCGGCAGCAGGGGCAGCGCGGC------------CGGTGGGACGAGCGGCTGCTCGACC
GCGCGGGCGAGTCCGGCTCCGGCCGCGGTGCGGTGGGGCGGGCGTTCTCGTCCATGGTGCTCATCATCCGGGAGCTCCAG
AGCTTCGCGCTGCAGATGCGGCAGGCGCTCTTCTACGAGGACATGCAGAGCGTGCTCGCGCGCGTGCACGCCGAGATGGA
CGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCCGCCCTCATGGTCTCCGTCATGCTCCTCCTCGCCA
ACTTCACCGTCTACTCCATGGGTGACAACATCGCGATGGCGGCCAACCTCCCGCCTCCCCAGCCCACCGTGGCGGCCGTC
GCAATGCTCGACGCCCAGCACGCGGAGCAGTCCCGTCCCGATCAGCGGTTCGACAGTGTGTCGCTCAACATGTTCTCCAT
TGGCCGCACGGCCTCGGTGGACGGGAACAGCGGCGGCGGTGGCAAGGCTCCGCCGGTTGCCGGGGCCACCGGCGACGATC
GCTCGGACGAATCCTCGTACCGGCAAAGCGGCGCGGTGCTTCCCCAGGACGAGTCACAGGCGACGCCGGTGGGGGCGGCC
GCGGAGGACACGGA------------------GGACGAGCTGGTCATCTGGAAAAGGATAGCCGACGAGGCGACGAGAAT
GCAGGCGAGCGTGCGCGTGGAGGCTCTGATGGACCCGGACATCCTGGGGCAGCTCGTCGCGCCGGTGGAGGCGAAGCTGG
ACACGGAGGACGTGGCCGACTACGCGAGGACGGAGCAGAGATACGCGATGGCCGTGTCCGAGGAGCCCAGCAACGCGCTG
CTGCTCGCCAACTTCGCGCAGTTCCTGTACCTGGTGCAGCGCGATCACGACCGGTAGGCGCCGCGCCATGG-----CGCC
ATCAAACTGTTCGACACAATGTCATCG---TTTTTTCACCGTCGCTGACGGGCGGTGGTTTCTTCATGG-TC---GCAGG
GCGGAGCACTACTTCAAGCGGGCGGTGCGCGCGGAGCAGCCGGCGGACGCGGAGACGCTGGGGTGGTACGCGACGTTCCT
GTGGAAGGCGCGCAACGACCTGGCGGCCGCGGAGGAGACGTTCCAGGAGGCCATCGCCGCCGAGCCGAGCAACGGGCACC
ACGCGGCGGCCTACGCGCACTTCCTGTGGAACACGGGCGGCGAGGACACATGCTACCCCCTCGACTGA------------
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>chr3B_1_TraesCS3B01G400100
CAAGGGGTTGGTGAGAGGTGAGACGAGACTATTAGCTTTTCCTTTAGGAGTAGAGATTATTTGACATCATGTCGGCCATG
TGTAGTATACTTTGCTTTTTTAGTATACACGTGATACTGAACCAATATACAATACCAAAATGCATT-----TAAAGTATA
AAAAAATAAGATGTCACTGCTCCCATCTAACTGCAGTCTTTTTACTGAAATTCTGAAAATATTTCATGTTACAAAGGTTG
AT-AAACCATGGAAAAAGACGATTGCGAGAAATTTC--AGTTACATTAGATATTTTGCATTTTCTTAGATCTATATGATC
C-AAGCATTATATCACTAATCTTTTCGAGTTTAATTAAAGTTAAATGTA------ATTCTGATTCTGAAAACTACAACCC
ATGAACACACATA-ATGACGACTGATGAGAGAGGGCGGCCGTACAGAAGAGA------GATAGAGACGGCGGTCTGCAGA
TTCTTTGAGCACACCC------ACGCCCACGCACTGGGTGGCAGGGAAATAAATAGCAGGACCTGCCCACACTACGCACA
CGACGA--AACATACTCTTCGTCTCCGCCCAACACCCCATCGTCTCCGTCTCTATTCATTCACTTGGAGCCTCACCTGAC
ATCTTGCGCTCCCTTTTCTCGTTCTTCGTCTTCCATCCTCGACCCATTTGCATTTGCGTCGAGTGAGCGCTAATTTTGGG
CCGTTTCTATATTAAGCACGGCAAAATATCGTTTCCGTCCCCGACGACTATATAATTCCCGCGGAGGCGGTCACCGACTC
ACCGTAATACCAGTGCTCGATCGCTCGCT------------TCACGAGCTCCCTGGGTCTGGGTGGGGAGGTTGACCAGG
GCACCTCCCGGATCCTGAATTAAGGCCACCGTTCGTTT----TCCCTCCCATCCCTTCCCCTCCCTTGCATTTAGCCTCT
CTCCGTTGTGGGGCGAGCCGCGCGCGGGCCATTTTCCCAACCGTCGTTCCGGTGGTGGCCGGGCGCGAGGTTGCGGTGAG
TGACTCATGGGCATCCAGGTCGCGCCCCCCTCC------TCTTCTCTGGGCGCCGGATGCATGAGGCTGTCGAGGTCCCC
GTCGTCGTCGTCGCTGGCGACCTGGAGCGCCGGCATCGCCCGCCGGCGCGCCGGGCACGCGATGGTTACGCGCGCCCTCA
GCGCCAGCATCGACAGCGTCGGCAGCCACGGCGGGGATGACGAGGAGTTCCTGAGGAGGATCCAGGAGCTCGCTGTCGGG
CTGCACCCGGGCGCCGGCGGCTGCGGCTGGCCGGCGAGCGTAGAGCGGAGCGCCAGCAGCGTCGGTCTGCCGCTGTCGCT
CAGGATGCTCAAGCGCAAGAAGCGGCAGCAGGGGCAGCGCGGC------------CGGTGGGACGAGCGGCTGCTCGACC
GCGCGGGCGAGTCCGGCTCCGGCCGCGGTGCGGTGGGGCGGGCGTTCTCGTCCATGGTGCTCATCATCCGGGAGCTCCAG
AGCTTCGCGCTGCAGATGCGGCAGGCGCTCTTCTACGAGGACATGCAGAGCGTGCTCGCGCGCGTGCACGCCGAGATGGA
CGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCCGCCCTCATGGTCTCCGTCATGCTCCTCCTCGCCA
ACTTCACCGTCTACTCCATGGGTGACAACATCGCGATGGCGGCCAACCTCCCGCCTCCCCAGCCCACCGTGGCGGCCGTC
GCAATGCTCGACGCCCAGCACGCGGAGCAGTCCCGTCCCGATCAGCGGTTCGACAGTGTGTCGCTCAACATGTTCTCCAT
TGGCCGCACGGCCTCGGTGGACGGGAACAGCGGCGGCGGTGGCAAGGCTCCGCCGGTTGCCGGGGCCACCGGCGACGATC
GCTCGGACGAATCCTCGTACCGGCAAAGCGGCGCGGTGCTTCCCCAGGACGAGTCACAGGCGACGCCGGTGGGGGCGGCC
GCGGAGGACACGGA------------------GGACGAGCTGGTCATCTGGAAAAGGATAGCCGACGAGGCGACGAGAAT
GCAGGCGAGCGTGCGCGTGGAGGCTCTGATGGACCCGGACATCCTGGGGCAGCTCGTCGCGCCGGTGGAGGCGAAGCTGG
ACACGGAGGACGTGGCCGACTACGCGAGGACGGAGCAGAGATACGCGATGGCCGTGTCCGAGGAGCCCAGCAACGCGCTG
CTGCTCGCCAACTTCGCGCAGTTCCTGTACCTGGTGCAGCGCGATCACGACCGGTAGGCGCCGCGCCATGG-----CGCC
ATCAAACTGTTCGACACAATGTCATCG---TTTTTTCACCGTCGCTGACGGGCGGTGGTTTCTTCATGG-TC---GCAGG
GCGGAGCACTACTTCAAGCGGGCGGTGCGCGCGGAGCAGCCGGCGGACGCGGAGACGCTGGGGTGGTACGCGACGTTCCT
GTGGAAGGCGCGCAACGACCTGGCGGCCGCGGAGGAGACGTTCCAGGAGGCCATCGCCGCCGAGCCGAGCAACGGGCACC
ACGCGGCGGCCTACGCGCACTTCCTGTGGAACACGGGCGGCGAGGACACATGCTACCCCCTCGACTGACGCGCGCGCCCG
CCGGCCGGACTCCGAGATCCAGCAGCACACCACGTCGATACGTCCCAGAACACGAAGAAAAAGAGTATAGTAGAAAGAAA
GAGAGGATTTTTTT-ACTCCACCACCCGCAAGAAGTCCACGCACTTCTCTTCCCATGTGCTTGGCCAACCACGAAGCAAA
TACTAGTAC-TACTACGCTTGCAAGTGCAGCTTATACATTCACACGGCACAGC---GCAAGAATCTCTCGTTTTACTTTG
GCTTGTTTACGGGGAGAGCTGAGAGGAGGGGTGCAATG----------GTCGGTGCATGCCGCGA-----TGAATGTTCG
GCGGCTTGCTTCCTCTTCCCCTTTCTGGAAATCCGGCGAGTGGGGGCAGTTGGCCGGAGACGGCGGGAGGGCG---AGGG
TGTGGTAGATCGGGCTCGCGGCTCCACGGGTTTGTCGGTTGCGCTCGGCCGTGGGTTCCCCTAGTAGCCGTACGTGTCCG
TTCCGCTGGTGTCGCGTGTCACTCTATCTCCATGGCCGTGGATGCTTGCGGAGTCACGGTGTGGTGGAAAGTGGTGATGT
GAGGCTAGCCTGTCGTACTATAGATATGGTATAAAGTAGAGGGAATCCGC-----TCCAGTATACAGCAGCAATTTGGCC
GCATGTAACTCTGCACATGAACAAGCAATGAGAATATCTCCAGTTCTCCCCTGAAAAAATCCTGCATCAAGCAACACGCA
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATAGAATGCATCAGC
ATGCATTTCATAGAGAGGAAAGATTCTTCGGAAGGCTCATTTTCCTAGAGAAATGACAGGATGAGAGAGATTCCACTTCA
GCAAATTGCGTTTTT---ATCCATTATCTTAATGGCTAATGTACGGGAGCTGCTGAACTTTTAGCTTAATTTCTTAGTCT
GTTGCTGGCTTTTCAGGTGTCTTTAGTAGTATACAATACTCGATGTTCCATACTCTATT
>chr3A_124
--------------------------------------------------------------------------------
-------------------------------------------AATATACAATACCAAAATATATATTTAATAAAGTATA
AAAAG-TAAGGTGTCACCGCTCCCACCTAACTGCAGTCTCTTTACTGAAATTCTGAAAATATTTCATGTTACAATGGTTG
AT-AACCATGG--AAAAGACGATTGTGAGAAATTTCACTGTTACATGAG-------------------------------
---------ATATCAGTAATTTTGTCGAGTTTAAATAAAGTTAAATATA------ATTCTGTAAACATG-ACTACAACCC
ATGAAAACGCATAGACGACGACTGATGAGAGAGGGCGGCCGTACGGAAGAGAAAGAGAGAGAGAGACGGCGGTCTGCAGA
TTCTTTGAGCACACCCGCGACCACGCCTACGCACTGGGTGGCAGGGAAATAAATAGCAGGACCTGCCCACACTACGCACA
CTAGACGGAACACACTCTTCGTCTCCGCCCAACACCCCCTCGTCTCCG--------------------------------
---------TCCCTTTTCTCGTTCTTCGTCTTCCATCCTCGAGCCATTTCCATTTGCGCCGAGTGAGCGCTAATTTTGGG
CCGTTTCTATATTAAGCACGGCAAAATATCGTTTCCGTCCCCGACGACTATATAATTCCCGCGGAGGCGGTCACCGACTC
ACCGTAATACCAGT------------GCT------------TCACGAGCTCCCTGGGTCTGGGTGGGGAGGTTGACCAGG
GCACCTCCCGGATCCTGAATTAAGGCCACCGTTCGTTTCCCCTCCCATCCCTCCCTTCCCCTCCCTTGCATTTAGCCTCT
CACCGTTGTGGGGCGAGCCGCG----GGCCA-TTTCCCAACCGTCGTTCCGGTGGTGGCCGGGCGCCAGGTTGCGGTGAG
TGACTCATGGGCATCCAGGTCGCGCCCCCCTCCTCCCCGTCCTCTCTGGGCGGCGGCTGCGTGAGGCTGTCGAGGGCCCA
GTCGTCGTCGTCGCTGGCGACCTGGAGCGCCGGCATCGCCCGCCGGCGCGCCGGGCACGCGATGGTGACGCGCGCCGTCA
GCGCCAGCATCGACAGCGTCGGCAGCCACGGCAGGGATGACGAGGAGTTCCTCAGGAGGATCCAGGAGCTCGCCGTCGGG
CTGCACCCGGGCGCCGGCGGCTGCGGCTGGCCGGCCAGCGTGGAGAGGAGCGCCAGCAGCGTCGGGCTGCCGCTGTCGCT
CAGGATGCTCAAGCGCAAGAAACGGCAGCAGGGCCAGCGCGGC------------CGGTGGGACGAGCGGCTGCTCGACC
GCGCCGGCGAGTCCGGCTCCGGCCGCGGCGCTGTGGGACGGGCGTTCTCCTCCATGGTGCTCATCATCCGGGAGCTCCAG
AGCTTCGCGCTGCAGATGCGGCAGACGCTCTTCTACGAGGACATGCAGAGCGTGCTGGCGCGCGTCCACGCCGAGATGGA
CGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCCGCCCTCATGGTCTCCGTCATGCTCCTCCTCGCCA
ACTTCACCGTCTACTCCATGGGCGACAACATCGCGATGGCCGCCAACCTCCCGCCTCCCCAGCCCACCGTGGCGGCCGTC
GCAATGCTCGACGCCCAGCACGCGGAGCAGTCCCGTCCCGATCAGCGGTTCGACAGCGTGTCGCTCAACATGTTCTCCAT
TGGCCGCACGGCCTCGGTGGACGGGAACAGCGGCGGCGGCGGCAAGGCTCCGCCGGTCGCCGGGGCCACCGGCGACGATC
GCTCGGACGAATCCTCGTACCGGCAAAGCGGCGCGGTGCTTCCACAGGACGAGTCACAGGCGACGCCGGTGGGGGCGGCC
GCGGAGGACACGGA------------------GGACGAGCTCATCATCTGGAAAAGGATAGCCGACGAGGCGACGAGAAT
GCAGGCGAGCGTGCGCGTGGAGGCGCTGATGGACCCGGACATCCTGGCGCAGCTCGTCGCGCCGGTGGAGGCGAAGATGG
ACACGGAGGACCTGGCCGACCACGCGAAGACGGAGCAGAGATACGCGATGGCCGTGTCCGAGGAGCCGAGCAACGCGCTG
CTGCTCGCCAACTTCGCGCAGTTCCTGTACCTGGTGCAGCGCGATCACGACCGGTACGTGCCCCGCCATGG-----CGCC
ACCAAACTGTTCGACACAATGTCATCG---TCTTTTCACCGTCGCTGACGGGCGGTGGTTTTTCCTG--ATC---GCAGG
GCGGAGCATTACTTCAAGCGGGCGGTGCGCGCGGAGCAGCCGGCGGACGCGGAGACGCTGGGGTGGTACGCTACGTTCCT
GTGGAAGGCGCGCAACGACCTGGCGGCCGCGGAGGAGACGTTCCAGGAGGCCATTGCCGCCGAGCCCAGCAACGGGCACC
ACGCGGCGGCCTACGCGCACTTCCTGTGGAACACGGGCGGCGAGGACACATGCTACCCCCTCGACTGACGCGCGCGCCCG
CCGGCCGGCCTCCGAGATCCAGCAGCACACCACGTCGATACGTCCCAGAACACGAAGAAAAAGAGTATAGTAGGAAGAGA
GAGAGGATTTTTTT-ACTCCACCA-CCGCAAGAAGTCCACGCACTTCTCTCCCCATGTGCTTGGCCAACCACGAAGCAAA
TACCAGTACGTACTACGCTTGCAAGTGCAGCTCATACATTCACACGGCATCACAGTGCAAGAATCTCTCGTTTTACTTTG
GCTTCTTTACGGGG-----------------TGCAATGGCCGGT-GACGTCGGTGCATGCCGCGA-----TGAATGGTCG
GCGGCTGGCTTCCTCTTCCCCTTTCTGGAAATCCGGCGAGTGGGGGCAGTTGGCCGGAGACGGCGGGAGGGCGGCGAGGG
TGTGGTAGATCGGGCTCGCGGCTCCACGGGTTTGTCGGTTGCGCTCGGCCGTGGGTTCGCCTAGTAGCCGTACGTGTCCG
TTCCGCTGGTGTCGCGTGTCACTCTATCTCCATGGCCGTGGATGCTTGCGGAGTCACGGTCTGGTGGAAAGTGGTGATGT
GAGGCTACTCTGTCGTACTATAGATATGGTA--AAGTAGAGGGAATCCGC-----TCCAGTATACAGCAGCAATTTGGCC
GTATGTAACTGTGCGCATGAACAAGCAATGAGAATATCTCCAGTTCTCCACTGAA-AAATCCTGCATCAAGCAACAAGCA
TCTCTCT-------------------------------------------------------------------------
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>chr3D_183
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---------------------------TAACTGCAGTCTCTTTATTGAAATTCGGAAAATATTTCATGTTAC-AAGGTTG
ATGAACCATGG--AAAAGACGATTGCGAGAAATTTCGCAGTTACATGAGATATTTTGCATTTTCTTAGATCTATATGATC
CGAAGCATTATATCATTAATCTTGTCCAGTTTAAATAAAGGTACATGTAATTCTGATTCTGAAAACATG-TCTACAACCC
ATGAACACACATAGATGACGACTGATGAGAGAGGGCGGCCGTACAC------AAGAGAGATAGAGACGGCTGTCTGCAGA
TTCTTTGAGCACACCCACGCCCACGCCCACGCACTGGGTGGCAGGGAAATAAATAGCAGGACCTGCCCACACTACGCACA
CTAGACGGAACACACTCTTCGTCTCCGCCCAACACCCCCTCGTCTCCG--------------------------------
---------TCCCTTTTCTCGTTCTTCGTCTTCCATCCTCGACCCATTTCCATTTGCGTTGAGTGAGCGCTAATTTTGGG
CCGTTTCTATATTAAGCACGGCAAAATATCGTTTCCGTCCCCGACGACTATATAATTCCCGCGGAGGCGGTCACCGACTC
ACCGTAATACCAGT------------GCTCGATCGCTCGCTTCACGAGCTCCCTGGGTCTGGGTGGGGAGGTTGACCAGG
GCACCTCCCGGATCCTGAATTAAGGCCACCGTTCGTTTCCC----CTCCCCTCCCTCCCCCTCCCTCGCATTTAGCCTCT
CACCGTTGTGGGGCGAGCCGCG----GGCCATTTTCCCAACCGTCGTTCCGGTGGTGGCCGGGCGCCAGGTTGCGGTGAG
TGACTCATGGGCATCCAGGTCGCGCCCCCCTCCCCA---TCCTCTCTGGGCGGCGGCTGCGTGAGGCTGTCGAGGGCCCA
GTCGTCGTCGTCGCTGGCGACCTGGAGCGCCGGCATCGCCCGCCGGCGCTCCGGGCACGCGATGGTGACGCGCGCCCTCA
GCGCCAGCATCGACAGCGTCGGCAGCCACGGCGGGGATGACGAGGAGTTCCTCAGGAGGATCCAGGAGCTCGCCGTGGGG
CTGCACCCGGGCGCCGGCGGCTGCGGCTGGCCGGCGAGCGTGGAGCGGAGCGCCAGCAGCGTCGGCCTGCCGCTGTCGCT
CAGGATGCTCAAGCGCAAGAAGCGGCAGCAGGGGCAGCGCGGC------------CGGTGGGACGAGCGGCTGCTCGACC
GCGCCGGCGAGTCCGGCTCCGGCCGCGGCGCTGTGGGACGGGCGTTCTCGTCCATGGTGCTCATCATCCGGGAGCTCCAG
AGCTTCGCGCTGCAGATGCGGCAGGCGCTCTTCTACGAGGACATGCAGAGCGTGCTCGCGCGCGTCCACGCCGAGATGGA
CGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCCGCCCTCATGGTCTCCGTCATGATCCTCCTCGCCA
ACTTCACCGTCTACTCCATGGGTGACAATATCGCGATGGCCGCCAACCTCCCGCCTCCCCAGCCCACCGTTGCGGCCGTC
GCAATGCTCGACGCCCAGCACGCGGAGCAGTCCCGTCCCGATCAGCGGTTCGACAGCGTGTCGCTCAACATGTTCTCCAT
TGGCCGCACGGCCTCGGTGGACGGGAGCAGCGGCGGCGGTGGCAAGGCTCCGCCGGTCGCCGGGGCCACCGGCGACGATC
GCTCGGACGAATCCTCGTACCGGCAAAGCGGCGCGGTGCTTCCTCAGGACGAGTCACAGGCGACGCCGGTGGGGGCGGCC
GCGGAGGACACGGA------------------GGACGAGCTGGTCATCTGGAAAAGGATAGCCGACGAGGCGACGAGAAT
GCAGGCGAGCGTGCGCGTGGAGGCTCTGATGGACCCGGACATCCTGGGGCAGCTCGTCGCGCCGGTGGAGGCGAAGCTGG
ACACGGAGGACGTGGCCGATTACGCGAGGACGGAGCAGAGATACGCGATGGCCGTGTCCGAGGAGCCCAGCAACGCGCTG
CTGCTCGCCAACTTCGCGCAGTTCCTGTACCTGGTGCAGCGCGATCACGACCGGTACGTGCCGCGCCATGG-----CGCC
ACCAACCTGTTCGACGCAATGTCATCG---TTTTTTCACCGCCGCTGACGGGCGGTGGTTTCTCCATGGTCGCATGCAGG
GCGGAGCACTACTTCAAGCGGGCGGTGCGCGCGGAGCAGCCGGCGGACGCGGAGACGCTGGGGTGGTACGCGACGTTCCT
GTGGAAGGCGCGCAACGACCTGGCGGCCGCGGAGGAGACGTTCCAGGAGGCCATCGCCGCCGAGCCCAGCAACGGGCACC
ACGCGGCGGCCTACGCGCACTTCCTGTGGAACACGGGCGGCGAGGACACATGCTACCCCCTCGACTGACGCGCGCGCCCG
CCGGCCGGCCTCCGAGATCCAGCAGCACACCACGTCGATACGTCCCAGAACACGAAGAAAAAGAGTATAGTAGGAAGAGA
GAGAGGATTTTTTTTACTCCACCC-CCGCAAGAAGTCCACGCACTTCTCTCCCCATGTGCTTGGCCAACCACGAAGCAAA
TACTAGTAT-TACTACGCTTGCAAGTGCAGCTTATACATTCACACGGCACG---GTGCAAGAATCTCTCGTTTTACTTTG
GCTTGTTTACGGGGAGAACGGAGAGGAGGGGTGCAATGGCCGGCGGACGTCGGTGCATGCCGCGACGCGATGAATGTTCG
GCGGCTTGCTTCCTCTTCCCCTTTCTGGAAAACCGGCGAGTGGGGGCAGTTGGCCGGAGACGGCGGGAGGGC---GAGGG
TGTGGTAGATCGGGCTCGCGGCTCCACGGGTTTGTCGGTTGCGCTCGGCCGTGGGTTCCCCTAGTAGCCGTACGTGTCCG
TTCCGCTGGTGTCGCGTGTCACTCTATCTCCATGGCCGTGGATGCTTGCGGAGTCACGGTCTGCTGGATGGTGGCGATGT
GAGGCTAGTCTGTCGTACTATAGATATGGTA--AAGTAGAGGGAATCCGCTCTTCTCCAGTATACAGCAGCAATTTGGCC
GCATGTAACTCTGCGCGTGAACAAGCAATGGGAATATCTCCAGTTCTCCCCTGAA-AAATCCTGCATCAAGCAGCAAGCA
TCTCTCTCTCTCCCTCTGAAGA------------------------------------------AATAGAATGCATCAGC
ATGCATTTCATATAGAGGAAAGATTCTTCGGAAGGCTCATTTTCCTAGAGAAATGACAGGATGACAGAGATTCCACTTCA
GTGACTTGCGTTTTAGTAATCCATTATCTTAATAGCTAATGTACGGTAGCTGCTCAACTTTTAGCTTAATTTCTTAGTCT
GTTGCTGGCTTTTCAGGTGTCTTTAGTTGTATACAATACTCGATGTTCCATACTCTATT
>chr1B_1243
CGGCGG--------------------------------------------------------------------------
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-------------------GGTGCGGGTGGCCGCCGAGCCTGGAACAGAGCGCGAGCAGCGTCGGGCTGCCCCTGTCCCT
TAGGATTCTGAAGCGGAAGAAGCAGCAGCGGCGGCAGCAGGTGCCGCCGCGGTCGCGGTGGGACGAGCGGCTGAGCCTG-
--------------GGCTCCGCCGGCGAGTCGGTGGGCCGCGCCTTCTCCTCCATGGTGCTCATCGTGCGGGAGCTGCAG
AGCTTCGCGCTGCA------GCAGATGCTCTGCGAC---GACCTGCAGGCCGTCCTGGCGCGCGCCCACGGCGAGATGCA
GGACTCGTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCGGCGCTCATGCTCTCCCTCATGCTCCTCCTCGCCA
ACTTCACCGTCCACTCGATGAGCAACAGCGTCGCCGCCGCCGCCG---TCGCACCGACCCCGCCCGCTGCCCCGGCTGCT
ACGGTGGTCGACACCCAGCACACCGAGCCATCCAAC------CCGCGGTTCGACGCGGCTTCCGTCAAGACGTTCTCTGC
TGGCCGCACTGCTTCGGTCGGTGGGGGTAGCGGGGGTGGCGGCGATGTCCGGCCCGTCGCGGGAGCTTCCGGCGACGACC
GGGGGGACGAATCCCGCTACAGTCTAAGCCGCGTCGCACCACAGCAACTAA---------CGCCGCTGGCGGGGACGGGC
GTGGAGAATGTCGTGCCCGGCGCCGCCGCCGTGGACGAGCAGGCCATCTGGGAAAGGATGGTCGCGGAGGCCTCGAGCAT
GCAGGCCGATGCGCGCGCCGACGAGTTGACGGACCCGGACGTGCTGGGGAACCTGGTCGCGCCGGTGGAGGCGGAGATCG
AGACGGAGGACGTCGGCGAGTACGCGCGGACGGAGCAAAGGTACAAGCTGGCCGTGTCCGAGGAGCCCAACAACTCGCTC
ATCCTCGCCAACTTCGCCCAATTCCTCTACATCACGCGGAAGGACCACAAGCGGTAGGTCCCCGCCTCCCCGGCCACGCC
CCCCAACTGTTCGACGAATTGCCAGTTCAATTTTTTTACCGTGGTATTGATCTGTCAACGTGTCTGTTAATC---GCAGG
GCGGAGCACTACTTCGAGCGGGCGGTGCGGGCGGA---GCCGACGGACGCGGAGGCGCTGAGCCGGTACGCGACGTTCCT
GTGGAAGGCGCGGGACGACGTCGAGGCGGCGGAGGAGACGTACCAGGAGGCCATCGCGGCCGACCCCGGCAACGCGCACT
ACGCCGCTGCGTACGCGCATTTCCTCTGGAACACCGGCGGCGAGGACACGTGCTTCCCCCTCGACTGACGCGCG------
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>SNPs
-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------SS--S--------------
----SS----S------S-------S-------------S----------------------------------------
-----S-SSS-SS---------------------------------S---------------------------------
---------------S-------S----------S---------------------------SSSSSSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-SSS------S-------------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS----------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------SSSSSSSSSSSS------------------------------------------------------
--------------------------------------------------S-----------------------------
-S--------------------SSSS----------------------------------------S-------------
-----------------------------------------S----------S---S---S--------------S---S
------------------------------------------------------------------S-------------
----------------------------------------------------S--------------------S------
-----------------------------------------S-----------------------S--------------
--------------------------------------------------------------------------------
----S-----------------------S--------S------------------------------------------
-----------------------------------------------------------------S--------------
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----------------------------------------S---------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------------------------S----------------------
-------------------------------------------S------------------------------------
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----------------------------------------------------------S---------------------
-S-------------------------------------------------------------S----------------
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------------------------------------------------------------------S-------------
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--------S----------------------------------------------------------------S----S-
------------------------S-------------------------S-----------------------------
--------------------------------------------------SS----------------------------
-----------------S-S------------------------------------------------------------
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------------------------------------------------------------S-------------------
--------S----------------------SS-----------------------------------------------
--------------S----------------------------------------S--------------------S---
------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
------------S---------------------------------------------------S---------------
-SS-S---------S------------------S------------S-------S-------------------------
---------------------------S-------------------------------
>forward_647
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-------------------------------------------------------------------AGCCTCACCTGAC
ATCTTGC-------------------------------------------------------------------------
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>reverse_2649
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--------ACTCCGAGATCCAGCAGCA-----------------------------------------------------
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