>input_sequence_48958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ATGTTCTCCTTCAAGTCCAGG
TATAGTATTTAGTTTCCT-CCCGAGTTTTCTTATCCGAATCATTGAATCATCGAATCATTTGTTATCTGTTGGCCAACAT
GAATCATGGTTGCGGTTCCATGAAATTTAGGTTTCTGTCGAATTTCTTGGGTTGTTATTTCTTTGTTTCGATTACTGTCA
ACAATCGATGAACC--CAGGGGCTTTGTTTTATGTTCACAGCGTCAAGTCGTCTTCCAGTGGGAACCAAGTTTCCACGCC
GCGCTTCACTGAGGAATCAGATATGCACGAGCAGTTGAACAAGTTGCAGGAGGAGCTGGTAAGGGAGAAAGAGGAGAAGG
TACGTGCACTGGATGAGATAGAGGAGCTCAAGAAGAAAAGCAGTAAGAAGAAGAAGCTAAAAGGGAGTAGCGGAGACGAT
CAGTTGGACCTTGCACGCAGATTAGAGCAGTTGGAAGTTGAGCTGGAGGCAGCAAGGGATTCAGAGAAGAACATGCTAGT
GTCGCTGGAGGCCCAAACAAAGCAGCTTGAACAAACCAAGGTATCTCTGGAGGAGGCCAAGCTTGAGATAGATTCACTTC
AAGACAACAACAAGACCTTGGTTGCACTGTCCTCTAATCCAACTAGACAGCCAGCCAGGAATTTCAGAAGAAGGGGTGTA
ATGTCCTTCTCCTTTGCCGATCCTGCTGAGGTGGAGACATTCTCATTACAGCGTGACCTCAAGTTGGCTGTCGAAGCTGA
GGAGAAGTGCAAGAAAGCCATGGATGACTTGGCGATAGCCTTGACGGAACAAACCACGGCAGCTAGAGAGGCAAAAATGG
AGCTCTCGATGGTGCAAGCTCAGTTGAAAAATGCAACAACTGAATTGGAGAACTCAAAGGCCTCTCTGGAAATCATGGAA
GAAAAGCTACGGTTGGCACAGGAAGAGGCTGCCAGACTGAACTTTGAGTCGGATGAGTTGGCAGCAGCCTCAAAAGAGAA
AGAGAGAGGACTCATCGATTGCATCAAGATATTTGAGGGGGAGATGAACAAAGCAAAAGAAGAGAATGACAAACTGTTTG
AATCACAGAGAGTGATCAGAGATGAGAATTCCAGGCTGAGGGAAATGCTGAAGCATGCGGTTAATGAAGCCAATGTAGCA
AAAGAATCCTTGGAGATTGCCAGGGTAGAGAATTCTCAGCTTCAAGAAGACATGTCTGAGAAAGAGAATACCTTAAAGAG
CATCGTGCAAGAATACGAGTCCTTGAAGGTAAGTGAGGCTGCTGCACAGAGTAGCATTAAAGAATTGAAGGACATGATTG
ATGCTATGTTCAGTTCAGAGTCGGCCAAAACCTCGGCAGAAGCATCACCCATAGATGCCAAGGGAGGCGGCGGGAAAGGA
AGATATGTGGCAGCAGATAATATGTACTCTGATGTTGAAAGCTCTCCTCGTTCAAAGGATATCAGGAGTCCTGCAAGGCA
GCAAAAGAGGACGATTCTTAGGAAATTTGGTGACATAATGAAGAAAAGAAACCCTCAAACTCAAAGTGTAATCTAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_1_TraesCS3B01G276900
ACCTCCAGCATATGTTCGGCTTGCTCCAGCCCATCCGGGTCTGCATGCCGCAATTCGTTTCCCAAAAAGAAGGACATTAT
CTTTAAAAAAAAAAGAAGGACATTAATGGCTTTGTTCATCCACAACTAGGAAATGCTCCAGCATTTTTGGCAAAGAGTTA
GCTGGAGGAGCAGGATAACCAAAATGCTGTAGCACCAATTATGTTATGTATGAAATGCACATTAATCCAGCATTCCCTTT
CCAAAAGGATGCCACCAAACCAGTCCAATATTCTAATGGTCAATACGTGCACGCAACGATAAATAATTCGATTATTAAAT
TCTAAATTCGTAAAGTATTGATTAGAAGGGGAAAGGGCAGGCCAAGTCGTCGTTTATAAAAGGAGCCTCCTGCCTCGTAG
TAGCATCGTCATTCTTCCCCACAACAATTCAACCACACAATGCTGAACGAAGCCGACGAGTGGTGTGCCTTCGTCTGACG
GACTGCTGGCCCAGCTGAGGCCACCAACGCTCAGGTCAGCGAAGCACGGTTCAACTGTTACATTTTATATCGAGAAATAA
TAAAGAAATGCAAGGCAAAAGAATAGGTATATC---TCATCTGTTAGGAAACAAAATCGCACCGCTTTTGTT--TAGAAT
AGCGAATTGTATTGTGC--CTTTGGCTGACCGCCTCTGGACGTGCTTCCCTTCACCTTCAACGCGGCTCTTGGAGTTCGA
CCGTTTCAACAAGTCTCTGATTCATCTTTTCCCCTTTTTTAACAGCGCAGAAGACGCGGTGTTGGATCTCTGCTTCTCTC
CCCTGTTTTGAAGTTTCGCCATAAAGAAAAGTCTCTTTGCTTCGAGAGACAGCCACCATAGTTTCTCTCCGCTCCGGTAT
GCACAAACCGACTTCTCGGGGCAGTACCTGATTCCCGCCTATGCATGTGATCTGATTCTCATAGGAGTAACCCAGGTGGC
ATAATTGCTTGATCCTGGGCTGC------------CAGCACCGTTCCTGACCCGAGAAGATGTTCTCCTTCAAGTCCAGG
TATAGTATTTAGTTTCCT-CCCGAGTTTTCTTATCCGAATCATTGAATCATCGAATCATTTGTTATCTGTTGGCCAACAT
GAATCATGGTTGCGGTTCCATGAAATTTAGGTTTCTGTCGAATTTCTTGGGTTGTTATTTCTTTGTTTCGATTACTGTCA
ACAATCGATGAACC--CAGGGGCTTTGTTTTATGTTCACAGCGTCAAGTCGTCTTCCAGTGGGAACCAAGTTTCCACGCC
GCGCTTCACTGAGGAATCAGATATGCACGAGCAGTTGAACAAGTTGCAGGAGGAGCTGGTAAGGGAGAAAGAGGAGAAGG
TACGTGCACTGGATGAGATAGAGGAGCTCAAGAAGAAAAGCAGTAAGAAGAAGAAGCTAAAAGGGAGTAGCGGAGACGAT
CAGTTGGACCTTGCACGCAGATTAGAGCAGTTGGAAGTTGAGCTGGAGGCAGCAAGGGATTCAGAGAAGAACATGCTAGT
GTCGCTGGAGGCCCAAACAAAGCAGCTTGAACAAACCAAGGTATCTCTGGAGGAGGCCAAGCTTGAGATAGATTCACTTC
AAGACAACAACAAGACCTTGGTTGCACTGTCCTCTAATCCAACTAGACAGCCAGCCAGGAATTTCAGAAGAAGGGGTGTA
ATGTCCTTCTCCTTTGCCGATCCTGCTGAGGTGGAGACATTCTCATTACAGCGTGACCTCAAGTTGGCTGTCGAAGCTGA
GGAGAAGTGCAAGAAAGCCATGGATGACTTGGCGATAGCCTTGACGGAACAAACCACGGCAGCTAGAGAGGCAAAAATGG
AGCTCTCGATGGTGCAAGCTCAGTTGAAAAATGCAACAACTGAATTGGAGAACTCAAAGGCCTCTCTGGAAATCATGGAA
GAAAAGCTACGGTTGGCACAGGAAGAGGCTGCCAGACTGAACTTTGAGTCGGATGAGTTGGCAGCAGCCTCAAAAGAGAA
AGAGAGAGGACTCATCGATTGCATCAAGATATTTGAGGGGGAGATGAACAAAGCAAAAGAAGAGAATGACAAACTGTTTG
AATCACAGAGAGTGATCAGAGATGAGAATTCCAGGCTGAGGGAAATGCTGAAGCATGCGGTTAATGAAGCCAATGTAGCA
AAAGAATCCTTGGAGATTGCCAGGGTAGAGAATTCTCAGCTTCAAGAAGACATGTCTGAGAAAGAGAATACCTTAAAGAG
CATCGTGCAAGAATACGAGTCCTTGAAGGTAAGTGAGGCTGCTGCACAGAGTAGCATTAAAGAATTGAAGGACATGATTG
ATGCTATGTTCAGTTCAGAGTCGGCCAAAACCTCGGCAGAAGCATCACCCATAGATGCCAAGGGAGGCGGCGGGAAAGGA
AGATATGTGGCAGCAGATAATATGTACTCTGATGTTGAAAGCTCTCCTCGTTCAAAGGATATCAGGAGTCCTGCAAGGCA
GCAAAAGAGGACGATTCTTAGGAAATTTGGTGACATAATGAAGAAAAGAAACCCTCAAACTCAAAGTGTAATCTAGCATC
CTCAGGCACCAGGCAGTGACTAAATACAAGTATACACTCTAGATTCCATTTTGTTTCTTCAAATCCCTTGTTAGTTG---
-----TAATGCTTGACAAAATGAGATGTTCCAAGTGCGGAGAAACCCTTTTATCCATTCAGTTTTACAGATGTAAATTAC
AGAGAATGTAACCTATATGCAAAACATACAGGTAGTGAAAATATG-AACCCGACATAGTTTCTAGGGGTGCTTGACATAT
GCTGCCTCCAACTTTCAATCTGCTACATCTGAAAGCTTGTTATGAACATGGTAGATGATAGGTAGCCAAGACAAGGCTGC
CGCACAACAAGAGCAGGGGAGAAACTTGGG-----TAACTGGGACTATTTTTCTAGTTATCTATTGATTGATATTGCTAG
GCATTAGTGCATTACATAGCCAGCTTACAACTTGGAGGCTAGGCCGAACTAACAGATTTTAGTAAATAACTAACTTGAGA
ATCAAGAAATATCTCTAAGAGATTTAAACTGCCAAGGATAACTAGGGATGCTTATCCCCTT-AGTTTCAGGCGTGGCTCT
TTCCATCGTGGCCTTCTTGTGCCTCCCGTAGGTTTGTATGTCTATCCCCACATAACAAAGCTTGATATGGAAATTCTCTT
ATGTTTTAGACTAATGCAGAAACCTAGCAATGTGCAATTTAGCAGTCCTAGTCTTGTCATAACAGTCTGCAGAACCTGTT
TATGAATTTAAGAATATTTGCAATTGAACTTGCCTAATCGTTGTTTGTCTATTGTTCTCTAAACAGAAATAGTTTAACAA
CCAGGTAAAATAAATACCCAATTTCCCAGTTCTAAACCTCCTTGTCAATGTGTTGTGAGTTCATTATTTATATAAAATCG
AATAAAACTGCATTCCAGTCCGCATACCCAATCATAAGCTCTCGAGATAAA----AAAACTAGAAAACCATCTCTCCACT
ATATATCCAAAGCAAAATAAAGCATGCAGCTACTAAACTAGGATTTGCAACAGCA
>chr3D_7
------AGCATATGTTCGGTTTGCTCCAGCACATCCGGGCCTGCATGCCGCAATTCGTTTCCCAAAAAGGACAT------
----------------------TTAATGGTGTTGTTCCTCCACAACTAGGAAATTCTCCAACA-TTTTTGCAAAGAATTA
ACTGGAGGGGCAGGATACCCAAAATGCTGTAGCGCCAATTGTGTCAAGTATGAAATGCACATTAATCCAGCATTCCCTTT
CCAAAAGGATGCCACCAAACCAGTACAATATTCTAATGGTCAATACGTGCACGCAACGATAAATAATTCGATTATTAAAT
TCTAAATTTGTAAAGTATTGATTAGAAGGGGAAAGGGCAGGCCAAGTCGTCGTTTATAAACGGATCCTCCTGCCTGGTAG
TAGCCTCGTCGTTCTTCCCCTCAACAATTCAACCACACAATGCTGAACGGAGCCGACGAGTGGCGTGCCTTCGTCTGACG
GACTGCTGGCCCAGCTGAGACCACCAACGCTCAGGTCAGCGAAGCACGGTTCAACTGGCACATTTTATATCGAGAAATGA
TAAAGAAATGCAAGCCAAAAGAATAGGTATATCTCATCATCTGTTAGGAAACAAAATCGCACCGCTTTTGTT--TAGAAT
AGCGAATTGTATTGTGCGTCTTTGGCTGACCGCCTCTGGACGTGCTTCCCTTCACCTTCAAGGCGGCTCTTGGAGTTCGA
CCGTTTCAACGAGTCTCTGATTCATCTTTTCCCCTTCTTTAACAGCGCACAAGACGCGGTCTTGGATCTCTGCTTCTCTG
CCCTGTTTTGAAGTTTCGCCATAAAGAAAAGCCTCTTTGCTTCGAGAGACAGCCACCATAGTCTCTCTCCGCTCCGGTAT
GCACAAACCGACTTCTCGGGGCAGTACCTGATTCCCGCTTATGCATGTGATCTGATTCTCATAGGAGTAACCCAGGTGGC
ATAATTGCTTGATCCTGGGCTGCCAGCACCAGCACCAGCACCGTTCCTGACCCGAGAAGATGTTCTCCTTCAAGTCCAGG
TAGAGTATTTAGTTTCTTCCCCGAGTTTTCTTATCCAAATC--------ATCGGATCATTTCTTATCTGTTGGCCAACAT
GAATCATGGTTGTGGTTCCATGAAATTTAGGTTTCTGTCGAATTTCTTATGTTGTTATTTCTTTGTTTCGATTACTGTCA
ACAATCGATGAACC--CAGGGGCTTTGTTTTATGTTCACAGCGCCAAGTCGTCTTCCAGTGGGAACCAAGTTTCCACGCC
GCGCTTCACTGAGGAATCAGATATGCACGAGCAGTTGAACAAGTTGCAGGAGGAGCTGGAAAGGGAGAAAGAGGAGAAGG
TACGTGCACTGGATCAGATAGAGGAGTTCAAGAAGAAAAGCAGTAAGAAGAAGAAGCTAAAAGGGAGTAGCGGAGACGAT
CAGTTAGACCTTGCACGCAGATTAGAGCAGTTGGAAGTTGAGCTGGAGGCAGCAAGGGATTCGGAGAAGAACATGCTAGT
GTCGCTGGAGGCCCAAACAAAGCAGCTTGAACAAACCAAGGTATCTTTGGAGGAGGCCAAGCTTGAGATAGATTCGCTTC
AAGACAACAACAAGAGCTTGGTTGCACTGTCCTCTAATCCAAGTAGACAGCCAGCCAGGAATTTCAGAAGAAGGGGTGTA
ATGTCCTTCTCCTTTGCCGATCCTGCTGAGGTGGAGACATTCTCATTACAGCGTGACCTCAAGTTGGCTGTCGAAGCTGA
GGAGAAGTGCAAGAAAGCCATGGATGACTTGGCGATAGCCTTGACGGAACAAACCACGGCAGCTAGAGAGGCAAAAATGG
AGCTCTCGATGGTGCAAGCTCATTTAAAAAATGCAACAACTGAATTGGAGAACTCAAAGGCCTCTCTGGAAATCATGGAA
GAAAAGCTCCGGTTGGCACAGGAAGAGGCTGCCAGACTGAACTTTGAGTCGGATGAGTTGGCAGCAGCCTCAAAAGAGAA
AGAGAGAGGACTCATCGATTGCATCAAGATATTTGAGGGGGAGATGAACAAAGCAAAAGAAGAGAATGACAAACTGTTTG
AATCACAGAGAGTGATCAGAGATGAGAATTCCAGGCTGAGGGAAATGCTGAAACATGCGGTTAATGAAGCCAATGTAGCA
AAAGAATCCTTGGAGATTGCCAGGGTAGAGAATTCTCAGCTTCAAGAAGACATGTCTGAGAAAGAGAATACCTTAAAGAG
CATCGTGCAAGAATACGAGTCCTTGAAGGTAAGTGAGGCTGCTGCACAGAGTAGCATTAAAGAATTGAAGGACATGATTG
ATGCTATGTTCAGTTCGGAGTCGGCCAAAACCTCGGCAGAAGCATCACCCATAGATGCCAAGGGAGGCGACGGGAAAGGA
AGATATGTGGCAGCAGATAATATGTACTCTGATGTTGAAAGCTCTCCTCGTTCAAAGGATATTAGGAGTCCTGCAAGGCA
GCAAAAGAGGACGATTCTTAGGAAATTTGGTGACATAATGAAGAAAAGAAACCCTCAAACTCAAAGTGTAATCTAGCATC
CTCAGGCACCAGGCAGTGACTAAATACAAGTATACACTCTAGATTCCATTTTGTTTCTTCAAATCCCTTGTTAGTTG---
-----TAATGCTTGACAAAATGAGATGTTCCAAGTGCGGAGAAACCCTTTTATCCATTCAGTTTTACAGATGTAAATTAC
AGAGAATGTAACATATATGCAAAACATACAGGTAGTGAAAATATG-AAACCGGCATAGTTTCTAGGGGTGCTTGACATAT
GCTGCCTCCAACTTTCAATCTGCTACATCTGAAAGCTTGTTATGAACATGGTAGATGATAGGTAGCCAAGACAAGGCTGC
CGCACAACAAGAGCAGGGGAGAAACTTGGGGAGGATAACTGGGACTATTTTTCTAGTTATCTATTGATTGATATTGCTAG
GCATTAGTGCATTACATAGCCAGCTTACAACTTGGAGGCTAGGCCGAACTAACAGATTTTAGTAAATAACTAACTTGAGA
ATCAAGAAATATCTCTAAGAGATTTAAACTGCTAAGGATAACTAGGGATGCCTATCCCCTT-AGTTTCAGGCGTGGCTCT
TTCCATCGTGGCCTTCTTGTGCCTCCCGTAGGTTTGTATGTCTATCCCCACATAACAAAGCTTGATATGGAAATTCTCTT
ATGTTTCAGACTAATGCAGAAACCTAGCAATGTGCAATTTAGCAGTCCTAGTCTTGTCATAACAGTCTGCAGAACCTGTT
TATGAATTTAGGAATATTTGCAATTGAACTTGCCTAATCGTTGTTTGTCTATTGTTCTCTAAACAGAAATAGTTTAACAA
CCAGGTAAAATAAATACCTTATTTCCCAGTTCTAAACCTCCTTGTCAATGTGTTGTGAGTTCATTATTTATATAAAATCG
AATAAAACTGCATTCCAGTCCGCATACCCAATCATAAGCTCTCGAGATAAAAAAAAAAACTAGAAAACCATCTCTCCACT
ATATATCCAAAGCAAAATAAAGCATGCAGCTACTAAACTAGGATTTGCAACAGCA
>chr3A_90
--------------------------------------------------------------------------------
---------AAAAAGAAGGACATTAATGGCGTTGTTCCTCCACAACTAGGAAATTCTCCAACA-TTTTTGCAAAGAGTTA
ACAGGAGGAGCAGGGTAACCAAAATGTTGTAGCACCAGTTATGTCAAGTATGAAATGCACATTAATCCAGCATTCCCTTT
CCAAAAGGATGCCACCAAACCAGTCCAATATTCTAATGGTCAATTCGTGCACGCAACGATAAATAATTCGATTATTAAAT
TCTAAATTTGTAAAGTATTGATTAGAAGGGGAAAGGGCAGGCCAAGTCGTCGTTTATAAAAGGATCCTCCTGCCTGGTAG
TAGCCTCGTCATTCTTCCCCTCAACAATTCAACCACACAATGCTGAACGGAGCCGACGAGTGGTGCGCCTTCGTCTGACG
GACTGCTGGCCCAGCTGAGGCCACCAACGCTCAGGTCAGCGAAGCACGGTTCAACTGGTACATTTTATATCGAGAAATAA
TAAAGAAATGCCAGGCAAAAGAATAGG--TATCTCATCATCTGTTAGGAAACAAAATCGCACCGCTTTCGTTTATAGAAT
AGCGAATTGTATTGTG-GTCTTTGGCTGACCGCCTCTGGACGTGCTTCCCTTCACCTTCAAGGCGGCTCTTGGAGTTCGA
CCGTTTCAACAAGTCTCTGATTCATCTTTTCCCCTTCTTTAACAGCGCACAAGACGCGGTCTTGGATCTCTGCTTCTCTG
CCCTGTTTTGAAGTTTCGCCATAAAGAAAAGCCTCTTTGCTTCGAGAGACAGCCACCATAGTCTCTCTCCGCTCCGGTAT
GCACAAACCAACCTCTCGGGGCAGTACCTGATTCCCGCTTATGCATGTGATCTGATTCTCATAGGAGTAACCCAGGTGGC
ATAATTGCTTGATCCTGGGCTG------CCAGCACCAGCACGGTTCCTGACCCGAGAAGATGTTCTCCTTCAAGTCCAGG
TAGAGTATTTAGTTTCTT-CCCGAGTTTTCTTATCCAAATC--------ATCGAATCATTTGTTATCTGTTGGCCAACAT
GAATCATGGTTGCGGTTCCATGAAATTTAGGTTTCTGCCGAATTTCTTGTGTTGTTATTTCTTTGTTTCGATTACTGTCA
ACAATCGATGAACCAACAGGGGCTTTGTTTTATGTTCACAGCGTCAAGTCGTCTTCCAGTGGGAACCAAGTTTCCACGCC
GCGCTTCACTGAGGAATCAGATATGCACGAGCAGTTGAACAAGTTGCAGGAGGAGCTGGTAAGGGAGAAAGAGGAGAAGG
TACGTGCACTGGATCAGATAGAGGAGCTCAAGAAGAAAAGCAGT---AAGAAGAAGCTAAAAGGCAGCAGTGGAGACGAT
CAGTTGGACCTTGCACGCAGATTAGAGCAGTTAGAAGTTGAGCTGGAGGCAGCAAGGGATTCAGAGAAGAACATGCTAGT
GTCGCTGGAGGCCCAAACAAAGCAGCTTGAACAAACTAAGGTATCTCTGGAGGAGGCCAAGCTTGAGATAGATTCGCTTG
AAGACAACAACAAGACCTTGGTGGCACTGTCCTCTAATCCAACTAGACAGCCAGCCAGGAATTTCAGAAGAAGTGGTGTA
ATGTCCTTCTCCTTTGCCGATCCTGGTGAGGTGGAGACATTCTCATTACAGCGTGACCTCAAGTTGGCTGTCGAAGCCGA
GGAGAAGTGCAAGAAAGCCATGGATGACTTGGCGATAGCCTTGACGGAACAAACCACGGCAGCTAGAGAGGCAAAAATGG
AGCTCTCGATGGTGCAAGCTCAGTTGAAAAATGCAACAACTGAATTGGAGAACTCAAAGGCCTCTCTGGAAATCATGGAA
GAAAAGCTCCGGTTGGCACAGGAAGAGGCTGCCAGACTGAATTTTGAGTTGGATGAGTTGGCAGCAGCCTCAAGAGAGAA
AGAGAGAGGACTCATCGATTGCATCAAGATATTTGAGGGGGAGATGAACAAAGCAAAGGAAGAGAATGACAAACTGTTTG
AATCACAGAGAGTGATCAGAGATGAGAATTCCAGGCTGAGGGAAATGCTGAAGCATGCAGTTAATGAAGCCAATGTAGCA
AAAGAATCCTTGGAGATTGCCAGGGTAGAAAATTCTCAGCTTCAAGAAGACATGTCTGAGAAAGAGAATACCTTAAAGAG
CATCGTCCAAGAATACGAGTCCTTGAAGGTAAGTGAGGCTGCTGCACAGAGTAGCATTAGAGAATTGAAGGACATGATTG
ATGCTATGTTCAGTTCAGAGTCGACCAAAACCTCGGCAGAAGCATCACCCATAGATGCCAAGGGAGGCAACAGGAAAGGA
AGATATGTGGCAGCAGATAATATGTACTCTGATGCTGAAAGCTCTCCTTGTTCAAAGGATATTAGGAGTCCTGCAAGGCA
GCAAAAGAGGACGATTCTTAGGAAATTTGGTGACATAATGAAGAAAAGAAACCCTCAAACTCAAAGTGTAATCTAGCATC
CTCAGGCACCAGGCAGTGACTAAATACAAGTATACACTCTAGATTCCATTTTTTTTCTTCAAATCCCTTTAACTCAAGAT
AGTTATAATGCTTGACAAAATGAGATGTTCCAAGTGCGGAGAAACCCTTTTATCCATTCAGTTTTACAGATGTAAATTAC
AGAGGATGTAACATATATGTAAAACATACAGGTAGTGAAAATACGAAACCCGAAATAGTTTCTAGGGCTGCTTGACATAT
GCTGCCTCCACCTTTCAATCTGCTACATCTGAAAGCTTGTTATGAACATGGTAGATGATAGGTAGCCAAGACGAGGCTGC
CGCACAACAAGAGCAGGGGAGAAACTTGGGGAGGATAGCTGGGACTATTTTTCTAGTTATCTATTGATTGATATTGCCAG
GCATTAGTGCATTACATAGCCAGCTTACAACTTGGAGGCTAGGCCGAACTAACAGATTTTAGGACACAACTAACTTGAGA
ATCAAGAAATATCTCTAAGAGATTTAAACTGCTAAGGATAACTAGGGATGCTTATCCCCTTAAGTTTCAGGCGTGGCTCT
TTCCATCATGGGCTTCTTGTGCCTCCTGTAGGTTTGTATGTCTATCCCCACATAACAAAGCTTGATATGGAAATTCTTTT
ATGTTCAAGACTAATGCAGAAACCTAGCAATGTGCAATTTAGCAGTCCTAGTCTTCTCATAACAGTCTGCAGAACCTGTT
AATGAGTTTAGGAATATTTGCAATTGAACTTGCCTAATCGTTGTTTATCTATTGTTCTCTAAACAAAAATATTTCAACGA
CCAGGTAAAATAAATACCTAATTTCCCAGTTCTAAACTTCCTTGTCCATGTGTTGCGAGTTTATTATTTATATAAAGTCA
AATAAAACTGCATTCCAGTCCGCATACCCAATCATAAGCTCTCGAGAT----AAAAAAACTAGAAAACCACCTCTCCACT
ATATATCCAAAGCAAAATAAAGCATGCAGCTACTAAACTAGGATTTGCAACAGCA
>SNPs
SSSSSS-------------S----------S--------S-----------------------------S-SSSSSSSSS
SSSSSSSSS---------------------S------S----------------S-----S--S----S-----------
S-------------------------------------------S-S---------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------------------S----------S----
----S---------------S----------------------------S------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
------------------------------------S------------S----------S------------------S
-------------------------------S------------------------------S-----------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--S-------------S-------------------S----SSSSSSSS-------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----------S---------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_20
ACCTCCAGCATATGTTCGGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_1929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACGGTTGGCACAGGAAGAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_405
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CCTCCTGCCTCGTAG
TAGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2390
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GCGGGAAAGGA
AGATATGTGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AGCATCGTCATTCTTCCCCA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2733
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CTATATGCAAAACATACAGGTAGTGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
