>input_sequence_48894
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----------------------------------------ATGCCGGCGGGCCACGGTCTGCGGTCGCGGACGCGCGACC
TGTTCGCGCGCCCGTTCCGGAAGAAGGGTTACATCCCGCTCACCACCTACCTGCGCACCTACAAGGTCGGCGAGTACGTC
GACGTCAAGGTGAACGGCGCCGTGCACAAGGGTATGCCGCACAAGTTCTACCACGGCCGCACCGGACGCGTGTGGAACGT
CACCAAGCGCGCCATCGGCGTCGAGATCAACAAGCAGGTATAGATCGATCCCGTTTTCTTCCCTCGCGGCTGTCCGGGCA
CAGCCACTGTT-----GATCTGTGTCCCTAGGGTACTTGCTTCACAGTGATACCGCCGTCGTGGCAGACTCCCATTTGTA
GGATTTGTGCAACTTATTGTTCTT-TGCAAGTGCGATTCTGTTTATTTAGTAGCTGTAATGGGCTTTTGCAGCCTCTTCT
TAGAAGGTTTGACAAGCGTAGATCTGCCTGCTTGGTAGGTGTGTCTTACAGAGGATTTAATGGCGATAGTGTGGG-CAAT
GCTTGTGCGGCTGCAGTCCTACAACGTTATCATGTTTTATATGCTCTGAAGAATAATTATTGTTGTAGTAATCCGAGTTG
ATATGATGTTGTTTTGTTATCAGTATATACGTTCAAATGGTAGATAAGGCGAGGAAGGTTGAAGCTGAAGTTGTG--CAG
TGTTTGTTGTACACATCATGTTCTCTCAAATGGTTTTAGCTGCTTGCTTCTGTTGCATGGAATACTAAATTTGGAAT---
--------------------------------------------------------------------------------
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------TTTGATTGCCCCTGCTTTATAATTCTATTAGTTTTGTCTATTGATTGTTGTGTTATTAGAGACTAATAAAGTGC
TGAGTGCATTTACAATTATGGCATATCGAAGAGTTCTGCTTTGCTTGAGGAAACA--------AGG--------------
-----ATTTCTGCCCAA-AAAGATTATATTAATCTATACTGCTGTGGCCCTGTATACATAC-------------------
--------------------------------------------------------------------TAGCATGTTATC
TCTTCTCTGAAGTAGCTAAGTTCTAACTTT--------------------------------------------------
-------------------------GTTGTTAGTGGTAAGAT--------------------------------------
-----------------ATGTATGTTTTGCCCTTTGTATTCTTTGAAGTACACCTCAAGTTATATGGCTATATTGAATAT
CTCGATTTGCTTGTGGTAATAGGCTAGAACGATTTGCATCTTTGAAATCAATAGTGCTATCAAGCATTTCTTTTTGTTCA
CTTATCCTGATGCTTTTGTTCAGCCTTGCATTTCATTCATTGTGTTCTAGTGGAACATACCGATTTGTATCGTAAAATTT
AATGTAGAGTCAAGTTCAGGACTAATATATTTACAATCACAATCCTGTTTACATTGCC-----------CAGGTTGGAAA
CCGCATTATCAGGAAAAGGATCCATGTCCGTGTTGAGCATGTGCAGCCATCCAGGTGTGCTGAGGAGTTCCGCCTGAGGA
AAGTGAAGAACGACCAGCTCAAGGCGGAAGCCAAGGCGCGCGGTGAGGTCATCAGCACCAAGAGGCAGCCACTCGGCCCT
AAACCTGGGTTCATGGTCGAGGGTACCACAATTGAGACCGTCACTCCCATTCCCTACGATGTGGTCAATGATCTCAAGGG
TGGTTACTAG----------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G164500
GTGACTGACTTCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCCTTCTGTTGTTGCCTAGGAGTAGA
CGGATTCACATTTTCAGAGACTGACAACACTACATCTGTTGCTCGAGGAATCCGAGACTTTGGTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAA-AACTTGGTGATCAGATAGACAAGAAAGACTTAGACGACACAAAAGATAGATGCAGCAA
GTTTCACAGAATTGGTTGCCGTCATAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTTATTGATG
ACA---------G---------AACTATGGAATAATAAATCTAAACGGAAAATAATTTGGCCTCTTACGATATTTGACAC
AATTGGGCTGAAAAATGAGCCCTTGTCTGCAGTTCCGCGAACATCTAAGCAAATTAAGTTACTACTATCATACTGTATCT
TTGAATAATAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCAT---GCATGCATGTCGATCACTTAATCGGACC
ATAATAAGCTTATATAGTAGAGCACTAGTTTTATTTGGCCGGGAGTTGAAAAATCAATTCCACCATTTTTTTGAGAATAT
ATA--------------------------ATCAATTCCACCATTGTTTTAGGGGTATCAATTCCACCAAA-GTCTCATCT
TCCTACATCTGCAATGGGCCGAAACTCCGTCAT-AAAAGTCCAGCCCAACACCACTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCAGAGCTATAAAACAGAACCATCTCCAAACCCTCGCAAACCCTAGTCCCCCCCACACCAACCACCCTT
CTCCCGCCGCCGCCCCGCGAAGCAAAGCAGGAGGAGCAGGATGCCGGCGGGCCACGGTCTGCGGTCGCGGACGCGCGACC
TGTTCGCGCGCCCGTTCCGGAAGAAGGGTTACATCCCGCTCACCACCTACCTGCGCACCTACAAGGTCGGCGAGTACGTC
GACGTCAAGGTGAACGGCGCCGTGCACAAGGGTATGCCGCACAAGTTCTACCACGGCCGCACCGGACGCGTGTGGAACGT
CACCAAGCGCGCCATCGGCGTCGAGATCAACAAGCAGGTATAGATCGATCCCGTTTTCTTCCCTCGCGGCTGTCCGGGCA
CAGCCACTGTT-----GATCTGTGTCCCTAGGGTACTTGCTTCACAGTGATACCGCCGTCGTGGCAGACTCCCATTTGTA
GGATTTGTGCAACTTATTGTTCTT-TGCAAGTGCGATTCTGTTTATTTAGTAGCTGTAATGGGCTTTTGCAGCCTCTTCT
TAGAAGGTTTGACAAGCGTAGATCTGCCTGCTTGGTAGGTGTGTCTTACAGAGGATTTAATGGCGATAGTGTGGG-CAAT
GCTTGTGCGGCTGCAGTCCTACAACGTTATCATGTTTTATATGCTCTGAAGAATAATTATTGTTGTAGTAATCCGAGTTG
ATATGATGTTGTTTTGTTATCAGTATATACGTTCAAATGGTAGATAAGGCGAGGAAGGTTGAAGCTGAAGTTGTG--CAG
TGTTTGTTGTACACATCATGTTCTCTCAAATGGTTTTAGCTGCTTGCTTCTGTTGCATGGAATACTAAATTTGGAAT---
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------TTTGATTGCCCCTGCTTTATAATTCTATTAGTTTTGTCTATTGATTGTTGTGTTATTAGAGACTAATAAAGTGC
TGAGTGCATTTACAATTATGGCATATCGAAGAGTTCTGCTTTGCTTGAGGAAACA--------AGG--------------
-----ATTTCTGCCCAA-AAAGATTATATTAATCTATACTGCTGTGGCCCTGTATACATAC-------------------
--------------------------------------------------------------------TAGCATGTTATC
TCTTCTCTGAAGTAGCTAAGTTCTAACTTT--------------------------------------------------
-------------------------GTTGTTAGTGGTAAGAT--------------------------------------
-----------------ATGTATGTTTTGCCCTTTGTATTCTTTGAAGTACACCTCAAGTTATATGGCTATATTGAATAT
CTCGATTTGCTTGTGGTAATAGGCTAGAACGATTTGCATCTTTGAAATCAATAGTGCTATCAAGCATTTCTTTTTGTTCA
CTTATCCTGATGCTTTTGTTCAGCCTTGCATTTCATTCATTGTGTTCTAGTGGAACATACCGATTTGTATCGTAAAATTT
AATGTAGAGTCAAGTTCAGGACTAATATATTTACAATCACAATCCTGTTTACATTGCC-----------CAGGTTGGAAA
CCGCATTATCAGGAAAAGGATCCATGTCCGTGTTGAGCATGTGCAGCCATCCAGGTGTGCTGAGGAGTTCCGCCTGAGGA
AAGTGAAGAACGACCAGCTCAAGGCGGAAGCCAAGGCGCGCGGTGAGGTCATCAGCACCAAGAGGCAGCCACTCGGCCCT
AAACCTGGGTTCATGGTCGAGGGTACCACAATTGAGACCGTCACTCCCATTCCCTACGATGTGGTCAATGATCTCAAGGG
TGGTTACTAGGGTGTTTGGGTTATCTGCCTGCACAACCAGTTCAAATCTATGGTGCTCTTATGAGTAGGATTTGCTCTCT
GAGCAGTAGTCTGGGTTGGGTCTTTATTCATGTCAAGAAGATATTCGGTGTAGGTTGCTATCATGAGTTTTGCAGAAATG
CTATACTGTGCTATTTCCTTCAGAATGATGATGTGCTCTGTTGAACTATATAGTTACATTGCTTGCCTCCAAAGGTTCAC
TTTGCCTCTACAGCCTTGGTGCTGCAGGGCTGCTGCAGCTTGCTGTTTGTCTTTCGAGTTTTGGCCCAATCGATTCAATT
ACTTCTC-GTGCATTTTGTATAGTGTTACTTT----CTTGATCTACATCTTGTTTGCACGCCTTAGCTTGGGGGATTGC-
-------------------------TTCTCATTGTTTGATGTTGATTTCTGAAATCTTGTGGATTGGCAACTGAGAGGAG
CCAAAATAGGGCGTTTGTCTGGACAATTCGAACGTACCCACTTATCCTGATGCTTTTGACTACAC---------GTCGGC
ATGTTGGAACTACTTTCATGAGATGATGACTAGTTGACTACCCACCACATGAACTAGATAGGCATCGCGCCTTGGCGCGC
GCTGCTCGGTTGAGCCGTGAAATCCAAAACAATACAATAGTGCATGGTTCAGTGCCGAAAATAATTCATCAAATATTTGA
CCTCATGAATTATTCAAATAAAGTAAGTAAGCTCGACATAAAGGAATAAACCGAGGTGGTTGGATAGATTAAAATTAGAG
CAAGTCACTCAGCGTGCCATGGTGTTGAGAATTTCTCTATCGTTTAGCCAAGTGGTACTGCATTAGTGTATCACAATTTG
TTCATCACTAGGAAACATGCCCGTGCGTTGCAACGGGAGAAAAAAGAATAGGCTGTGAGAATCGGGATGTGCGAATGTGT
AGAAATGAAAGAACTTTTGAGAATTTTCAAGTTAGAACATTTGTTGGCCTGTCTTCACTGGCTTTTGCCAGGCGACCGGT
GTGATATCTA
>chr1A_1
GTGACTGACTCCACTAAGCCTCAATACACTGTGGCTTTTAGTATATCACAATCATCCCTCTGTTTTTGCCTAGGAGCAGA
CGGATTCGAATCTTCAGAGACTGACAACACTACATCTGTTGTTTGAGGAATCCGAGAATTGGGTATGTCGCCCCTTCGAA
TGATACCTGGTATAGGGAAAAAAACTCGGTGATTAGATATACAAGATACATTTAGACGACACAGAAAAGAGAGGCAGCAA
GTTTCACAGAATTGGTTGCTCTCGGAGATTTGTTTGTTCAGTACATGCATGTCAAACTTATCTTGATTAACTTACTGATG
ATGGGCATTATGG---------AACTGTGGAATAATAAATCTAAAAGGAAAATACTTTGGCCTGGTATGATATGTGTCAC
AGTTGGGCTGAAAAATGAGCCATTCTCTGCAATACCGTGAGCATCTGAGCAAATGAAGTTACTG---TCAGACTGCATCT
CTGAATAACAGTAAGTAGCTCATGCATGCATGCTGATCACTTAATCGGATCTACATTTCTTTGCCTACTTTGGCAGTGTA
CAGCTAAATGCCTGAAGCTACCACGACACAGTCAACAAACAGAACTCGCAAGTACTTTTTCTACAGTTAATTAGCAGATG
GTTCTGAATACAAAATTCAGGTAACGGTGAATAATAGTAAGTAGCTCAT---GCATGCATGCTGATCACTTAATCGGACC
TAA-----------------------------------------------------------------------------
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>chr4B_1
GTGATTGACTTCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCACTCTGTTGTTGCCTAGGAGTAGA
CGGATTCACATC------GACTGACAACACTACATCTGTTGCTCGAGGAATTCGAGACTTTGGTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAAATACTTGGTGATCAGATACACAAGAAAGACTTAGACGGCACAAAAGATAAAGGCAGCAA
CTTTCACAGAATTGGTTGTCGTCGGAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTCACTGATG
ATA---------GATAGTGTGCAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCCTGTTACGATATTTGTCAC
AATTGGGCTGAAAAATGCGCCGTTATCTGCAGTTCCGCGAGCATCTAAGCAAATTAAGTTACTATTATCAGACTGTATCT
CTGAATAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCAT---GCATGCATGCTGATCACTTAATCGGACC
--------------------------------------------------------------------------------
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>chr3B_1
GTGACTGACTCCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCCCTCTGTTGTTGCCTAGGAGTAGA
CGGATTCACATC------GACTGACAACACTACATCTGTTGCTCGAGGAATCCGAGACTTTGGTCTATCGCCCCTTCGGA
TGATACATGGTATAGGGAAAA-TACTTGGTGATCAGATACACAAGAAAGACTTAGACGGCACAAAACATAGAGGCAGCAA
CTTTCACAGAATTGGTTGTCGTCGGAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTTACTGATG
ACA---------GACAGTGTGCAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCCTGTTACCATGTTTGTCAC
AATTGGGCTGAAAAATGAGCCGTTATCTACGGTTCCGCGAGCATCTAAGCAAATTAAGTTACTACTATCAGACTGTATCT
CTGAATAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCATCATGCATGCATGCTGATCACTTAATCGGACC
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>chr7B_1
GTGACTGACTCCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCCCTCCGTTGTTGCCTAGGAGTAGA
CGGATTCACATC------GACTGACAACACTACATATGTTGCTCGAGGAATCCGAGACTTTGGTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAAATACTTGGTGATCAGATACACAAGAAAGACTTACACGGCACAAAAGATAGAGGCAGCAA
CTTTCACAGAATTGGTTGTCGTCGGAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTTACTGATG
ACA---------GACAGTGTGCAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCATGTTACCATATTTGTCAC
AATTGGGCTGAAAAATGAGCCGTTATCTAGGGTTTCGCGAGCATCTAAGCAAATTAAGTTACTACTATCAGACTGTATCT
CTGAATAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCATGATGCATGCATGTTGATCACTTAATCGGACC
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>chr7B_1
GTGACTGACTCCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCCCTCCGTTGTTGCCTAGGAGTAGA
CGGATTCACATC------GACTGACAACACTACATATGTTGCTCGAGGAATCCGAGACTTTGGTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAAATACTTGGTGATCAGATACACAAGAAAGACTTACACGGCACAAAAGATAGAGGCAGCAA
CTTTCATAGAATTGGTTGTCGTCGGAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTTACTGATG
ACA---------GACAGTGTGCAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCATGTTACCATATTTGTCAC
AATTGGGCTGAAAAATGAGCCGTTATCTAGGGTTCCGCGAGCATCTAAGCAAATTAAGTTACTACTATCAGACTGTATCT
CTGAATAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCATGATGCATGCATGCTGATCACTTAATCGGACC
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>chr2A_1
GTGACTGACTCCACTAAGCCTCCATACACTG--GCTTTCAGTATCC--CAATCACCCCTCTGTTGTTGCCTAGGAGTAGA
CGGATTCACATC------GACTGACAACACTACATATGTTGCTCGAGGAATCCGAGACTTTGGTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAAATACTTGGTGATCAAATACACAAGAAAGACTTACACGGCACAAAAGATAGAGGCAGCAA
CTTTCACAGAATTGGTTGTCGTTGGAGATTTGTTTGTTCAGTACATGCATGTGAAACTTATCTTGATTAACTTACTGATG
ACA---------GACAGTGTGCAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCATGTTACCATATTTGTCAC
AATTGGGCTGAAAAATGAGCCGTTATCTAGGGTTCCGCGAGCATCTAAGCAAATTAAGTTACTACTATCAGACTGTATCT
CTGAATAACAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAGTAGCTCATGATGCATGCATGCTGATCACTTAATCGGACC
TAA-----------------------------------------------------------------------------
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----------
>chr6B_1
GTGACTGACTCCACTAAGCCTCCATACAGTG--GCTTTCAGTATCC--CAATCACCCCTCTGTTGTTGCCTAGGAGTAGT
CGGATTCACATTTTCAGAGACTGATAACACTACATCTGTTGCTCGAGGAATCCGAGACTTTGTTCTGTCGCCCCTTCGGA
TGATACATGGTATAGGGAAAAA-ACTTGGTGATCAAATACACAAGAAAGACTTAGACGGCACAAAAGATAGAGGCAGCAG
GTTTCACAGGATTGGTTGTCGTCGGAGATTTGTTTGTTCAGTACATGTATGTGAAATTTATCTTGATTAACTTATTGATG
ATA---------GATAGTGTGAAACTGTGGAATAATAAATCTAAAAGGAAAATAATTTGGCATGTTATGATATTTGTCAC
AATTGGGCTGAAAAATGAGCCGTTATCTGCAGTTCCGTGAGCATCTAAGCAAATTAAGTTACTACTATCAGACTGTATCT
CTGAAATAGC----------------------------------------------------------------------
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------------------------------------------------TCATGCATGCATGCTGATTACTTAATCGGACC
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>chr1D_506
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-----------------------------------------------------------------------------ACC
ATAATAAGCTTATATAGTAGAGCACTAGTTTTATTTTTCCGAGAGTTAAAAAATCAATTCCACCATTTTTGTTTTGAGAA
TAATCAATTTCACCATTTTTTTGAGAACTATCAATTCCACCATTTTTTTTGGGGTATCAATTCCACCAAAAGTCTCATGC
TCCTACATCTGCAATGGGCCGAAACTCCGTCAT-AAAAGTCCAGCCCAACACCACTCGGACCCCC-ACCA----------
--------------------------------------------------------------------------------
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------------CAGAGCTATAAGATAGAACCATCTCCAAACCCTCGCAAACCCTAG-CCCCCCCACACCAACCACCCTT
CTCCCGCCGCCGCACCGCGAAGCAAAGCAGGAGCAGCAGGATGCCGGCGGGCCACGGTCTGCGGTCGCGGACGCGCGACC
TGTTCGCGCGCCCGTTCCGGAAGAAGGGTTACATCCCGCTCACCACCTACCTGCGCACCTACAAGGTCGGCGAGTACGTC
GACGTCAAGGTGAACGGCGCCGTGCACAAGGGTATGCCGCACAAGTTCTACCACGGCCGCACCGGACGCGTGTGGAACGT
CACCAAGCGCGCCATCGGCGTTGAGATCAACAAGCAGGTATAGATCGATCCCGTTTTCTTCCCTCGCGGCTGTGCGGGCA
CAGCCACTGTC-----GATACGCGTCCCTGGGGTACTTGCTCCACAGCGATGTCGCAGTCGTGGTATACTCCCATTTGTA
GAATTTGTGCAACTGATTGTTCTTTTGCAAGTGCGATTCTGTTTATTTAGTAGCTGTAATGGGCTGTA------------
---AAAGTTTGACATGCGTAGATCTGCCTGCTTGGTAGGTGTAGCATACAGAGCATTTAATGGCGATAGTGTGGGGCAAT
GCTTGTGCGGCTGCAGTCCTACCACGTTATCATGTTTTATATGCTCTGAAGATTCATTATGGTTGTAGTAATCCGA----
----GATGTTTTTTCTTTATCAGTATGGGTC--CAAATGGTAGATAAGGCGAGGAGGGTTGAGGCTGAAGTTGTTCACAG
TGTTTGTTGTACACATCATGTTCCCTCGAATGGTTTTAGCTGCTTCCA----TTGCATGGAATACTAAATTTGGAC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGCCCCAGCTTTACAATTCTATTAGTT---TCTATTGATTGTTGTGTGATTAGAGACTGATAAATTGC
TGAGTGCATTTACAATTATGGCATATCGAAGAGTACTGCTTTG-TTGAGGAAAACAGCTTCCTAGG--------------
-----ATTTCTGCC-AACAAAGATTATAGTAATCCATTCTGCTGTGGCCCTGTATG----C-------------------
--------------------------------------------------------------------TATCACTTTATC
TCTTTTCTGAAGTAGCTAAGTTCTAACTTTA-------------------------------------------------
--------------------------TTGTTAGTGGTAAGAT--------------------------------------
-----------------ATATATGTTTTGCCCTTTGTTTTCTTTGAAATACACCTCAAGTTATATGGCTATATTCAATAT
CTTGATTTGCTCATGGTAATAGGCTAGAACACTTTGCATC-TTGAAATCAATAGTGCTATCAAGCATTTCTTTTTGTCAA
CTTATCCTTATGCTTCTGTGCAGCTTTACATTTCATTTATTGTGTTCTAGTGGAACATACCAATTTGTATCATAAAATTT
CATGTAGAGTCAAGTTCAAGACTAATATATTTACAATCACAATCGTGTTTACATTGCC-----------CAGGTTGGAAA
CCGCATTATCAGGAAAAGGATCCATGTCCGTGTTGAGCATGTGCAGCCATCCAGGTGTGCTGAGGAGTTCCGCCTGAGGA
AAGTGAAGAACGACCAGCTCAAGGCGGAAGCCAAGGCGCGCGGTGAGGTCATCAGCACCAAGAGGCAGCCGCTCGGCCCT
AAACCTGGGTTCATGGTCGAGGGTACCACAATTGAGACTGTCACTCCCATTCCCTACGATGTGGTCAATGATCTCAAGGG
TGGTTACTAGGGTGTTTGGGTTATCTGCCTGCACAACCAGTTCAAATCTATGGTGCTCTTATGAGTAGGATTTGCTCTCT
GAACTGTAGTCTGGGTTGGGTCTTTATTCATGTCAAGAAGATATTCGGTGTAGGTTGCTATCATGAGTTTTGCAGAAATG
CTATACTGTGCTATTTCCTTCAGAATGATGGTGTGCTCTGTTGAACTATATAGTTACATTGCTTGCCTCCAAAGGTTCAC
TTCGCCTCTACAGCCTTGGTACTGCAGGGCTGCTGCAGCTTGCTGTTTGTCTTTCGAGTTTTGGCCCAATCGATTCAATT
ACTTCTC-GTGCATTTTGTATA---TTACTTT----CTTGATCTACATCTTGTTTGCATGCCTTAGCTTCGGGGATTGC-
-------------------------TTCTCATTGTTTGATGTTGATTTCTGAAATCTTGTGCATTGGCAACTGAGAGGAG
CCAAAATAGGGCGTTTGTCTGGACAATTCGAACGTACCCACTTGTCCCTCACTTCACATATTCATTTCACAGAAGTCGGC
ATATTGGAACTTCTTTCATGAAATGATGATTAGTTGACTACCCACCACTTGAA---------------------------
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>chr1A_554
TTGAGAAT------------------------------------------------------------------------
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---------------------------------------------------AATCAGTTCCACCATTTTTTTTTAGAAGT
ATT-----------------------------AATTCCACCATTTATTTAGGGGTATCAATTCCACCAAA-GTCTCATCG
TCCTACATCTGCAATGGGCCGAAACTCCGTCATAAAAAGTTCAGCCCAACACCACTCGGACCCCCCACCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CAGAGCTATAAAATAGAACCATCTCCAAACCCTCGCAAACCCTAG-TCCCCCCACACCAACCACCCTT
CTCCCGCCGCCGCCCCGCGAAGCAAAGCAGGAGGAGCAGGATGCCGGCGGGCCACGGTCTGCGGTCGCGGACGCGCGACC
TGTTCGCGCGCCCGTTCCGGAAGAAGGGTTACATCCCGCTCACCACCTACCTGCGCACCTACAAGGTCGGCGAGTACGTC
GATGTCAAGGTGAACGGCGCCGTGCACAAGGGTATGCCGCACAAGTTCTACCACGGCCGCACCGGACGCGTGTGGAACGT
CACCAAGCGCGCCATCGGCGTCGAGATCAACAAGCAGGTATATATCGATCCCGTTTTCTTCCCTCGCGGCTGTGCTGGCA
CAGATTCTGTC-----GATCTGCGTCCCTGAGGTACTTGCTTCACAGTGATGCCGCCGTCGTGGCAGGCTCCCATTTGTA
GGATTTGTTCAACTGATTGTTGTT-TGCAATTGCGATTCTGTTTATTTAGTAGCTGTAATGGGCTTTTACAGCCTCTTGT
TGGAAGGCTTGACATTCTTAGATCTGCCTGCTTGGTAGGTGTCGCATACAGAGGATTTAATGGCGATAGTGTGGGTTAAT
GCTTGTGCGGCTGCAGTCATCCAACGTTATCATGTTTTATATGCTCTGAAGATTCATTATGGTTGTAGTAATCCAA----
----GATGTTGTTTTGTCATCAGTATGGGAA--CAAATGGTAGCTAAGGCGAGGAGGGTTGAAGCTGAAGTTGTT--CAG
TGTTTGTTGTACACA-CATGTTCCCTCAAATGGTTTTAGCTGCTTCCA----TTGCATGGAATACTAAATTTGGAC----
--------------------------------------------------------------------------------
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------------TGTCCCAGCTTTACAATTCTATTAGTTTCGTCTATTGATTGTTGTGTGATTAGAGACTGATAAAGTGT
TGAGTGCATTTACAATTATGGCATATTGAAGATTACTGCTTTGCTGAGC--AAACAGTCCCCTAGG--------------
-----ATTTCTGCCCAACAAAGATCATAGTAATCCATTCTGCTGTGGCCCTGTAT----AC-------------------
--------------------------------------------------------------------TAGCATGTTATC
TCTTTTCTGAAGTAGATAAGATCCATTC-T--------------------------------------------------
-------------------------GTTGTTAGTGTTAAGAT--------------------------------------
-----------------ATGTATGTTTTGCCCTTTGTTTTCTTTGAACTACACCTCAGGTTATATGGCTG----------
--------------------------------------------------------------------------------
-------------------------------------TATTGTGCTCTAGTGGAACATACTA--TTTTATCGTAAAATTT
CATGTAGACTCAAGTTCAGGACTAATATATTTACAATCACAATCCTGTTTACATTGTC-----------CAGGTTGGAAA
CCGCATTATCAGGAAAAGGATCCATGTCCGTGTTGAGCATGTGCAGCCATCCAGGTGTGCGGAGGAGTTCCGCCTGAGGA
AAGTGAAGAATGACCAGCTCAAGGAGGAAGCCAAGGCACGTGGTGAGGTCATCAGCACCAAGAGGCAGCCGCTCGGCCCT
AAACCTGGGTTCATGGTTGAGGGTACCACAATCGAGACCGTCACTCCCATTCCGTACGATGTGGTCAATGATCTCAAGGG
TGGTTACTAGGGTGTTTGGGTTATCTGCCTGCACAACCAGTTCAAATCTATGGTGCTCTTATGGGTTGGATTTGCTCTCT
GAGCAGTAGTCTGGGTTGGGTCTTTATTCATGTCAAGAAGATTTTCGGTGTAGGTTGCTATCATGAGTTTTGCAGAAATG
CTATACTGTGCTATTTCCTTAAGAATGATGATGTGCTCTTTTGAACTATGTAGTTACATTGCTTACCTCCGAAGGTTCTC
TTTGCCTCTACAGCCTTGGTACTGCAGAGCTGCTGCAGCTTGCTGTTTGTCTTTTGAACTTTGACCCAATCGATTCAATT
ACTTCTCAGTGCATTTTGTATA---TTACGTACTTGCTTGATCTACATCTTGTTTGCACGCCATAGCTTGGGGGATTGCT
TCTCCGCTTGCTTGTTCCATGATGATTCTCATTGTTTGATGT------------------GGATTGGCAACTGAGAGCAG
TCAAA---------------------------------------------------------------------------
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>chr5A_1000
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---------------------------------------GATGCCGGCGGGGCACGGGCTGCGGTCGCGGACGCGCGACC
TGTTCGCGCGGCCCTTCCGCAAGAAGGGGTACATCCCGCTCACCACCTACCTGCGCACCTACAAGGTCGGCGAGCATGTC
GACGTCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCGCACAAGTTCTACCACGGCCGCACCGGTCGCGTCTGGAACGT
CACCAAGCGCGCCATCGGCGTCGAGATCAACAAGCAGGTATAATTCCCCAGCCCCATACCTTCTCTGTTCTTCATCTGTG
GTCGTTGGGTTTGTTAGATCTGTGCTCCTAGGGC--------------GATACTGCGATCTTGACCGACGGGACACGTAA
ATCTGGTCTGTGGCCGGAGATTCTGAAGGTCACCAAATCTCTTGGTTCGTTTGATGCGAATTCAG---------------
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---------------TCTAGTATACTAGAATGCTTTTCTGTGCTTGATTTGTTATGATAGATTGCTATGTGTGCCTGTGA
TGAACTCTTCAGATCATGTTCATATGTTGTTACTCTTATAAATTGTCTTGCTTACTTTTCCTGTTTGTCAATTTGCTTGC
ATAGCTACACATTTCTGTAATGTCCTGCAATGATTTGATGTCCTGTTATGTTATGCTGCATCTTGAGAATGGATTAGATT
GAACTGTTTGATTACACATGCCCTAGGCCGAGCGCTTCCCCCTTCAGCTATGGGAAGGCGTGGTATTCCACGGGAGAGGT
TTTTGTGGCGCACGATTCGTGTGATGGGCATACATTAAAATTTCATTCTGGCTTCCTCTGACTGCATGCTTTACCTGTAG
CAGTTATGACAGCCTAA-TTGGATGATACACATATAAACATCTGTTTTCTTATTTAGTGGATACCTTGGCTTGTTTCATG
TAATGTTGCATATGGGTTGCATATCCTAGCCCGTTTCATCTAATGTGTCCTAGTTTGGATGCATTTCATGGCTTGTTTTG
TCTAATATGTAGTAGTTTGGATGCATTTCATGGCTCATCTTTGTATGCTGATAAGATTTTTGTACACGGTAAATGTTAGC
TCTCTAATGGTTCTCGTTGGTAGTAGTTGTTTGTTTTATCCATTTGGATTGGTAGACCACAGTAAGCCACATTTTACATC
ACTTGATGTTGGTCCCAATATTATTTCTGCATTTCCTTGTCTGTGAACTACTTTGT------------------------
--------------------------------------------------------------------------------
----------------------GTTATACATCTAAATTAGTGTTTGCTTGTCATGCCTTTTACATGTAAATGTTGCCCTG
TACTATGTATCAGTGGTTTCATATATGTCTGTGCTCTGTACACAGATTGTAACATGTGTTCTCTGTCATCAGGTTGGCAA
CAGGATCATCAAGAAGAGGATCCATGTGCGTGTGGAGCACGTGCAGCCATCCAGGTGCAACGAGGAGTTCCTCCAGAGGA
AGCTCAACAACGACAAGCTGAAGGCGGAGGCCAAGGTGCGTGGTGAGGTCATCAGCACCAAGAGGCAGCCAGCAGGCCCC
AAGCCTGGGTTCATGGTGGAGGGCACCACCATCGAGACGGTCACCCCCATCCCGTACGACGTCGTCAACGATCTCAAGGG
TGGTTACTAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>SNPs
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------------------------S-------
-----------------------SS-------------------------------------------------------
--------------------------S------------------S-----------------S------------S---
---------------------S--S---------------S-----------------------------S---------
S-------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
------------------------------------SS---S-----S------------------------SSSS-S--
--------------------------------------------S----------------------------------S
---------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-------------S-------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------S---------S-
-S------------S---------------------------SS-S----------------------------------
----------------------------------------------------S-S-----S---------------SSSS
SSSS----------------------SSSSSSS----------------------S------------------S-----
-----------------------S-------------------------SSS-----------------------SS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--------------S------------------S----------S---------
-----------------------------------------------------SS-------------------------
----------------------------S---------------------------SSS---------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---------S--------------------------S-----
--S--------SS-----------------SS--------S------------------------------------SS-
--------S------S---S----S--S---------S-----------------------S------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------------SSS-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S---SSSSSS-SSSSSS-S--S---------------
--S--------S---------S-------S------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_1178
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AAACCCTCGCAAACCCTAGT----------------------
--------------------------------------------------------------------------------
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----------
>reverse_2809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GATGCTTTTGTTCAGCCTTGC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>forward_2378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CTGCTGTGGCCCTGTATACA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>reverse_4141
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATCGGGATGTGCGAATGTGT
--------------------------------------------------------------------------------
----------
