>input_sequence_48884
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------------------------------------------------------------------ATGATGGCGTTCAG
GGGGCAGAGGCCGGCGCAGTCCGAGGAGATGTGCGACGCGGCGGCGGCCGTGGTGGCCGCGCGGCAGGGCATGGAGCAGC
CGCTCACGGCCGTGGCCGAGGCCTTCGAGGAGCTGGCGCGCGGGATGGAGGCCGACGGCGGGGAGCTCCGCCTCGCCCCC
TTCGGCGACACCTGCGCCCTCGTCTCCGTCCTCTTCAGCTCCCTCGGCATCGCCTTCAAGTTCGCCGAGAGCGAGTACGT
CACCAAGGTAAAAACCCAAACCGATCTCCCCTGTTTCCCCCCCTCGGTAATTCGGAGCCCCTCCGGTCGATC--TGTTAT
TCTTGGAGATGAAGTCGTCTCGAGATTCCGCATGGCGATCAGATAGAAAAATCGCATTACCTGCTTCGTTTCC-------
-------------------------------------AAGAAACAAAGCTCTGTTTTGTGTTTGACTTTGGTAAAAAATT
GTACTCCCGTCCTGCCATGGCATCTCTGCAGCGTCGCTCGCAATTGTTCGAATATTCTTCATACAATTGTTCTCATTGCG
ATTAGAAAGTAACCACACAGACTTGGGGAAGCTTTTAGGGTTCCCCAACAAGATTGTCTGCAAGAAAGAAA-TGCGATCG
GCGATCGTTTGTATTCTCCTTTTGTTCGGTCACGACCACGACCTGTAGCAGAAAGAAAGAAAGAAA----TGTGACCCAA
CTT---GCTCGGGTGAACCGTCCAGGTGAACGACCTCATCGGGGCATCAAAGGAGTACGCCACGCTCAACGACATCCTGG
ACAAGGACGTGGAGAACGACTCCGTCAAGAAGCAGGGCAGCCATTCCCGGAACCTGCGCCGGGTCCGGCTCGGCCTCGGC
CTCATCAAGGCCCTCTTCGAGCAGTTCCTCGCAACCGAGTACGTTTCTCCGCTCACTCACTCATTCATTCGTTCCAGCAG
AGCACAAATTTGTCAGCTTGCTCTCCTCCGCTGGCAGCAGCAGC---AAATGTAAATGCTTTGTGCAGCAATCAATGGTG
GTTCATCATCAGTTTGTTGCTAATAAAATCATCGTTGATTCCGCCAACATACGGACGGACGACAGCTTACACACTCTCTG
GCGTCTGATTTTTCAGGGGCGGCTCGTTGTATGATGCTGCGACGACGGCCTACGGCCAGGTTTGCGCCCCGTTCCATAGC
TGGGCGATCCGAAAGGCGGTTGGTGCCGGGATGTACACTCTCCCCAGCAGAGAGCAGTTGATAATGAGGTTGAACGAAAC
TGGTAAGCAAATGATTTGACATCCATCACCATCAGAGGATACCTACCTCAACTTATATTCAGTGATACTTG-ATGCTTTC
ATCAGATGATATG---TTGATTGATAGACCAATAACGAAATTCTGTCAAGTAGCTTGACTTGTCTAGGGATATTATTAGT
AGACCAATAATGAAATTCTGTCTCTGTGTGCTTGCAGATTGCTCTGTGCAGAAGGAGATGAGGAGATACATTGATGCATC
TAGTCCCATTATAGAATACATCGATAACCTGTTCCTCTCCAGGAACATTGTCCTAGATTGGTGA----------------
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-----------------------------------------------------------------------
>chr4A_1_TraesCS4A01G268800
GTGGTGTTACTTGCACACACGCAACCAGCACGCCGACATGCGGCTGGAGGCGTGTGGCTATGCCCTGCTGGTGCAGGACA
GGAGACGAGGTCATGACACAGTGTGCCTCCACACGCTTGAGCCCGCCACTGTGCGTGAGGATCCCCCCAACCGTCAAGCG
TGGGGG--------------------------------------------------------------------------
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-----------------ACCACCGCGTCCGAGTTCCCACCGCTTTTCTACTCCCCCAACACGCCAATCAACGGACCGACC
ACGACCAGTCTCTCC--------CGTCTGGTTTCAGTTTAGGACTCCACCTGG------------------GCGCCCCCT
---CACGAAAATCCTGGA---------------------------------CGATTTCGCCTCGCACTTCCTCTCCAAAT
CCCTCTCCTCCTCCGATCCTGCTCCC----CCCCGCAGCAGATTCCCGGCGGCAGCGGCACCCCACCCCAGCCTCCCCCT
ATACATAGACGGCATCCTCCTCTCCCCGGAGG-----------------CGCTATATTTTCCGTGAGCCCATTCTGCCTC
GTG---------CGTGCCTGCGTGTCCTCCGCCCGTGCCACCACCACCATCCGTTGAACGGTTGTTGGGCCGCGCCTTCG
GTGCCGAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGGAGGGGGAGGAGCAACGGCCTCCGCGCGCCACCG
GCGAGAGCGAGCGAGGGGGGAGGAGGGGCGGTTGGTTGGTTGGTTGATCGCTCGGCCGACG---ATATGATGGCGTTCAG
GGGGCAGAGGCCGGCGCAGTCCGAGGAGATGTGCGACGCGGCGGCGGCCGTGGTGGCCGCGCGGCAGGGCATGGAGCAGC
CGCTCACGGCCGTGGCCGAGGCCTTCGAGGAGCTGGCGCGCGGGATGGAGGCCGACGGCGGGGAGCTCCGCCTCGCCCCC
TTCGGCGACACCTGCGCCCTCGTCTCCGTCCTCTTCAGCTCCCTCGGCATCGCCTTCAAGTTCGCCGAGAGCGAGTACGT
CACCAAGGTAAAAACCCAAACCGATCTCCCCTGTTTCCCCCCCTCGGTAATTCGGAGCCCCTCCGGTCGATC--TGTTAT
TCTTGGAGATGAAGTCGTCTCGAGATTCCGCATGGCGATCAGATAGAAAAATCGCATTACCTGCTTCGTTTCC-------
-------------------------------------AAGAAACAAAGCTCTGTTTTGTGTTTGACTTTGGTAAAAAATT
GTACTCCCGTCCTGCCATGGCATCTCTGCAGCGTCGCTCGCAATTGTTCGAATATTCTTCATACAATTGTTCTCATTGCG
ATTAGAAAGTAACCACACAGACTTGGGGAAGCTTTTAGGGTTCCCCAACAAGATTGTCTGCAAGAAAGAAA-TGCGATCG
GCGATCGTTTGTATTCTCCTTTTGTTCGGTCACGACCACGACCTGTAGCAGAAAGAAAGAAAGAAA----TGTGACCCAA
CTT---GCTCGGGTGAACCGTCCAGGTGAACGACCTCATCGGGGCATCAAAGGAGTACGCCACGCTCAACGACATCCTGG
ACAAGGACGTGGAGAACGACTCCGTCAAGAAGCAGGGCAGCCATTCCCGGAACCTGCGCCGGGTCCGGCTCGGCCTCGGC
CTCATCAAGGCCCTCTTCGAGCAGTTCCTCGCAACCGAGTACGTTTCTCCGCTCACTCACTCATTCATTCGTTCCAGCAG
AGCACAAATTTGTCAGCTTGCTCTCCTCCGCTGGCAGCAGCAGC---AAATGTAAATGCTTTGTGCAGCAATCAATGGTG
GTTCATCATCAGTTTGTTGCTAATAAAATCATCGTTGATTCCGCCAACATACGGACGGACGACAGCTTACACACTCTCTG
GCGTCTGATTTTTCAGGGGCGGCTCGTTGTATGATGCTGCGACGACGGCCTACGGCCAGGTTTGCGCCCCGTTCCATAGC
TGGGCGATCCGAAAGGCGGTTGGTGCCGGGATGTACACTCTCCCCAGCAGAGAGCAGTTGATAATGAGGTTGAACGAAAC
TGGTAAGCAAATGATTTGACATCCATCACCATCAGAGGATACCTACCTCAACTTATATTCAGTGATACTTG-ATGCTTTC
ATCAGATGATATG---TTGATTGATAGACCAATAACGAAATTCTGTCAAGTAGCTTGACTTGTCTAGGGATATTATTAGT
AGACCAATAATGAAATTCTGTCTCTGTGTGCTTGCAGATTGCTCTGTGCAGAAGGAGATGAGGAGATACATTGATGCATC
TAGTCCCATTATAGAATACATCGATAACCTGTTCCTCTCCAGGAACATTGTCCTAGATTGGTGAACTGAATCGAGGATCA
TGCTTGCAGCTCTCCTCACGAGCTGCTAATGATGTCATTGTTTTATTGTTTTTCTCTCGTAGCTTTCTAGCCTTGGTGGG
GCGGTGAATGCTCCCCCTTCGCACTGTCTCTTGTACTGTACGATTATATCAAAAATCTAATTCTAAACGAAGAGGCGGTT
CTAGTATGATCATGCTGTTCTTATGCTTCCTG------------------------------------------------
----------------AAGAAGAGTAGTTTTTGGTAACAATTGTGCATCCATGTTATGGTTGTCTT-GTACTTGTACAAG
AGCAAACAAGAGCCTAATTGTTTAGCGGGGTTGTC---------------------------------------------
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---------AAAACGCAAGAACAAAAAAAGAAGTTGGGAATGAAAACCAATATGAATTTCAATTAAAAAGCTTTTGATGC
CATAGTCCATAGCAAAAACAACCAGTCATAGTAGGAGCTGGGTTGTGAATTTTCATCGAGAAGTATTCCAAAAGAAAG-A
ACTCTACAAAGAAGATTCTTCATA-CTAGAAGACGGCGTACTCTCC-AAGGCGGTTAAGTCAAAGCAAAAGGTCAACTTA
CGAATG-TTCATTAAAGGAGCACCTTGCTAAGGAGACCAAGGCTTGAATACCATTCTAATCGATTAGTATGTTTAGAGAG
GGGGTGAATAGACTAGTGAGCCAAAAATAGACAATT-TCTTAAATTTTAGTTTC--TTTGTCAACTTTAGGTTTTTCTAA
TATTCTATCAAGCACCTTACACATGCAATTTTGCTAGAGGATAGGGAACAAAAACAGTA-AATACATGCCAATATAATTC
TGCTAGAGTATAAGCAGCGGAAAGTAAATGCATGCAAGTGAAAGTAAACAAGTAGAGTTAGAGATACGCAAACAAGGGTT
GGCTCGGTGAAGATTTTTCATGTGGTGGATAGTTGACACTATCTTACATCCGTATTGATGGAGGCTTTGACTCAAGAAGG
GTCTATGATTATAAGGATCTCGGTTGTGAGATTCCAGGAAGGAACGGTCCACAAAGGATTATCACCAACGA
>chr4B_1
GTGGCGTTGCTTGCACGCATGCAACCAGCATGCTGACACGTGGCCGGAGGCCAGTGGCTATGTCCTGCTGGCGCAGGACG
GGAGGCGAGGCCATGACACAATGTGCCTCCACACGCTTGAGCCCGCCACTACGCGCGAGGATCCTCCCGACCGTCAACTC
GAGCATTGCGCCACCTTCGCCGTCGTCGACCTCGAGGAGGCGCGTCACTTTGTTGGAGGGGGCGCATCGTCGAGGGCGGC
ACCTCCATGCGCTCGAGCCCGTCGCCGTTCACCTTGAGGAGAAGCGTCGATTGGGATGGAGAGGGTCGTGTCCCCGTTGG
TGGTGTGGGGGCACATCGCCAGGACTGCGGGGTGCGGAGGCTATAATGGCGCAGCAGTGTGGGAACTGAATGAGGCGGTT
GACGAATGATCGAGGATCAAGTGAGAGGATCAAATGAGACGAATGACGAATGAAGCGGTTGTCAATGGGGAGAAGAATCT
GACCGTTAGCACCGAGAGGACGTCCTAGCAAACGACTACAAAAAACTGACGTGTCACCAACTTCGCGCTAAGATCCGCGC
ATGAAGATCGGACGGTAAAAAAAGGCGTTCCTCCCGGATGCATTTTTGGATTTCCGGCCAAAAATAGACTCTGGCGTTTT
GGCTCTCGGGTGCATTTGCTCTCGTATGAACAGTAAAATCAATTTTTTAAAAAAGAAATCCAACTTTTTTAGATGTTCTT
GTTAGTGTCGCAAGCATGCTTAACAATTTTCATGCGAAACAGATTAATAGTGTTCCATCGTGAAAAAACTAATTTGGGTG
TAACATTTGGTGTTTGATTTGTTTTGTTTTTTGCATAGGCCAAAATGCTTAACCTTTTACCTATTTTTTTGAATATCAGT
ACAGACACAAGCGCTCATATACACGCGCATACACTCATCCCTATGAACGCACACACGCACACCCTATCCCTATGAGCACC
TCTGAAAGACTGAGCCGACATATCATCTTGAGATTTACTAGGTCACCGTAGGCGCCTCGTCGTTGGCGGGAACGTTTCCT
TTCACTGAATGCGCATATCCTGAAATAAATCCAGGAATAAATGCGAGCAACAGGATTTGAACCCTGGTGGGCAGGGGATA
TCACAGTCTCTCTAACTATCCAACCACAGGTTGGTTCGCATTTACCTAAAAGTTTACAGGTAGCATTTGGATGTGACTAT
GAGTGCGTCAAAATTTTGTTGGGATATTTGTGACATTTCAAGAACCATTTTCCGCGTGCAGGAGCAACGTGCCGATTCCA
AAGTAGTAATATCATATTTTAGTGATTCCGAAGTAAGGCTGCGTTCGGTTTCTCTTCACTCCTTTAACTCCGCTTCCGGA
ACGGATCACATTTTAGCCTAATTTGCCGGAGCTGCCAAAACCCAGCTCCCCCAACTCCGCGAAGTGGGGAAGTTCCGAAT
AGGGCCTAAGTATCATATTTTTAGTTATTCTTTTCTTGAAATATATTTTATTTTTTATTCTTAAGTAATATCGCTGTTGC
CGTGAGTACAAGGAAACACCACCGCGTCCGAGTTCCTACCACTTTTCTACTCCGCCAACACGCCAATCAACGGACCGACC
ACGACCAGTCTCTCTCTCCCGTCTGGT---TTTCAGTCTAGGACTCCACCTGGCCGGCCCCCCTTTCCCGTGCGCCCCCC
---CACGAAAATCCTGGACGATGCCTATATAGGG---AAAAAAGAGGACCCCGATTTCGCCTCGCACTTCCTCTCCAACT
CCCTCTCCTCCTCCGATCCTGCTCCCA-----CCGCGGCAGATTCCCGGCGGCAGCGGCACCCCACCCCACCCTCCTCCT
ATACATAGACGGCATCCTCCTCTCCGCGGAGGCGCGTCTG-----ACCTCGCTATATTTTCCGTGAGCCCATTCTGTTCT
GCCTCGCGCGCCCGCCCGCCCG-----CCCGTCCGTGCCACCACCACCATCCGTT-AACGGTTGTTGGGCCGCGCCTTCG
GTGCCGAGGAGAGAGAGA--GAGAGAGGACGAGGGGTGGCCAGGAGGAGG------------------------------
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-----------------------------------------AGTAGGAGGAGGAGGAGCAACGGCCTCCGCGCGCCACCG
GCGAGAGCGAGCGAGGGAGGAGGAGGGGCGGTTGGTTGATCGATCGGTCAAGGTCTCAAGGATAATATGATGGCGTTCAG
GGGGCAGAGGCCGGCGCCGTCCGAGGAGATGTGCGACGCGGCGGCGGCCGTGGTGGCCGCGCGGCAGGGCATGGAGCAGC
CGCTCACGGCCGTGGCCGAGGCGTTCGAGGAGCTGGCGCGCGGCATGGAGGCCGACGGCGGCGAGCTCCGCCTCGCCCCC
TTCGGCGACACCTGCGCCCTCGTCTCCGTCCTCTTCAGCTCCCTCGGCATCGCCTTCAAGTTCGCCGAGAGCGAGTACGT
CACCAAGGTAAAAACC-AAACCGATCTCGCCTGTTTTTCCCCTCCGGTAATTCGCCGTTCC-----TCGATC--TGTTAT
TCTTGGAGACGAA---GTCTCGAGATTCCGCATGGCGATCAGATAGAAAAATCGTACTACCCGCTTCGTTTTCTTCAAGG
AAAATAATAGGAGGCATGTATAATAATCGTACTACCAAAGAAACAAAGCTCTGTTTTGTGTTTGACTTTGGTAAAAAATT
GTACTCCCGTCCTGCCATGGCATCTTTGCAGCGTCGCTCGCAATTGATCGAATATTCTTCCTACAATTGTTTTCATCGCG
ATTAGAAAGTAACCACGCAAACTTGGGGAGGCTTTCAGGATTCCCCAACAAGATTGTTTGCAAGAAAGAAACTGCAATCG
ACGATCGTTTTTATTCTCTTTTTGTTCGGCCACGACCGCGACCTGTAGCAGAAAGAAAGAAAGAAAGAAATGTAACCCAA
CTT---GCCCGGGTGAACCGTCCAGGTGAACGACCTCATCGGGGCATCAAAGGAGTACGCGACGCTGAACGACATCCTGG
ACAAGGACGTCGAGAACGACTCCGTGAAGAAGCAGGGCAGCCATTCCCGGAACCTGCGCCGGGTCCGGCTCGGCCTCGGC
CTCATCAAGGCCCTCTTCGAGCAGTTCCTCGCAACCGAGTACGTTTCTCCCTTCACTCATTCATTCATTCGTTCCAGCAG
AGCACAAATTTGTC-GCTTGCTCTCCTCTGCTGCTGGCAGCAGCAAAAAATG------ATTTGTCCAGCAATCAATGGCG
GTTCATCA-------GTTGCTGATAAAATTAGCATTGATTCCGCCAACATACGGACGGACGACAGCTGACACTCCCTCTG
GCGTCTAATTTTTCAGGGGCGGCTCGTTGTATGATGCCGCGACGACGGCCTACGGCCAGGTTTGCGCCCCGTTCCATAGC
TGGGCGATCCGAAAGGCGGTCGGTGCCGGGATGTACACCCTCCCCAGCAGAGAGCAGTTGATAATGAGGTTGAACGAAAC
TGGTAAGCAAATGATTTGACATCCATCACCATCAG--GATAACTACCTCAACTTATATTCAGTGATACTT-AATGCTTTC
ATCAGATGATATATGTTTGATTGATAGGTCAATAACGAAATTCTGTCAAACACCTTGACTTGTTTAGGGATATT---GGT
AGACCAATAATGAAATTCTGTCTGTGTGTGCTTGCAGATTGCTCTGTGCAGAAGGAGATGAGGAGATACATTGATGCATC
TAGTCCCATTATAGAATACATCGATAACCTGTTCCTCTCCAGGAACATTGTCCTAGATTGGTGAACTGAATGGAGGATCA
TGCTTGCAGCTCTGCACAGGAGCTGTTAATGATGTCATTGTTTTATTGTTTTTCTCTCGTAGCTTTCTAGCCTTGGTGGG
GCGGTGAATGCTCTCCCTTCGCACTGTCTCTTGTACTGTACGATTATATCAAAAATCTAATTCTAAACGAAGAGGCGGTT
CTAGTATGATCATGATATTCTTATGCTTCCTATTACACGC-----CCGGTCAACTTGTTGATCAGAAAGGAAAC----GA
GAGCATGGAGTCCTGAAAGAAGAGTAGTTTTTGGTAACAATTGTACATGCATGTTATGGTTGACTTCGTACTTGTACAAG
AGAAAACAGGAGCCTAATTGTTTAGCGGGGTTGTCAAAATGCATGAACAAAAAGTTCGAATGGCATCTGGTCGAGATCCG
TCTGATCGACTGAGGAAACTAGCCGCCGCTGCCGCCAAGAGATCCAACTTTTCCGGCGCCGTCTTCCGGACGCTCCCCTC
CACCGGCAACCTCTTGGTTGTCGGTGGTGAGGATGTCGCCGGATCCTGCGCGTGCGGATCGTTTTAGACGTAGCTTCTAG
GGCCCTAGTAGCTTAGGTTTTTAGACCGTTCAACGTTCGAGCGGGGATGGTGGACTTGTGTCCTCAGGCTCCGCCATTGC
GACGGCATGTGCTCCAGCTTCGGCGCGGAGTTTGGAAGGTAGTCCAGAAGCGAATGCAGATTGTGGTTTGCATCGACAAC
ATCTGAAAGACGGAACGTGTGCTAAGTTCATGGTTGATGGATGGTAGGTATGGCTTCCTCCTTCGGCGTCTTAGTCATGG
TGGGGTGACAGATTTGGAGTTCGATGGCACGTCCAGGTTGTTGCGCCGGACTGGTTCGTTCAATGACAATGGCTTCACCT
TTGGTGAGCCACCTTGGAGATTCACAAAGCTGCATATCAGTGATGGAGCGGCATCGAGCTCAGATAGAAGGTGATCTGTC
ATTTTCTTTTCCTTTGGTAGCTGTTGTGGTGGTGTCGGAGGCAGGTGACGGGCGTTGGTGTAAAGCTCAGAGACGTTGTG
TTGTCTTTTCACTTTTGTAATGTCGGTCTCTACGTGACTTATACTTTGATTTGTACGATATGAATGAGACATGTTTTACC
ATGCAAAAAAAAACGCAAGAACAAAAAGAAGTT---GGAGTGAAAACCAATATGAATTTGAATTAAAAGGCTTTTGATGC
CATAGTCCATAGCAAAAACAACCAGTCATAGT----GCTGGGTTGTGAT--------GAAAAGTATTCCAAAAAAAAGAA
ACTCTACAAAGAAGATTCCTCATAACTAGAGGACGTCGTACTCTTC-AAGGCGGTTAAGTCAAAGCAAAAGGTCAACTTA
CGAATGATTCATTAAAGGAGCACCTTGCTAAGGAGACCAAGGCTTGAATACCACTTTAATCGATA-----------AGAG
GAGGTGAATAGACTAGTGAGCCAAAAATGGACACTTCTCTTAAATTTTAGATTTTTTTTGTCAACTTTAGGTTTTTCTAA
CATTCTATCAAGCACCCAG-ACATGCAATTTTGCTAGAGTATAGGCAACGGAAAGAAAGTAATACATGCCAATATAATCC
TGCTAGAGTATAAGCAGCGGAAAGTAAATACATGCAAGTGAAAGTAAACAAGTAGAGTTAGAGATACACAAACAAGGGTT
GGCTCGGTAAAGATTTTTCATGTGGTGAATAGTTGACACTATCTTACATCCATGTTGATGGAGGCTTTGACTCAAGAAGG
GTCTAAAATTATAAGGGTTTCGATTGTGAGATTCTAGGAAGGAATGGTCCACAAAGGACTATCACCAACGA
>chr4D_172
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----------------------CGCGTCCGAGTTCCTACCACTTTTCTACTCCCCCAACACGCCAATCAACTGACCGACC
ACGACCAGTCTCTCTCTCTCGTTCGTCTGGTTTCAGTTTAGGACTCCACCTGGCC-----CCCTTTCCCGTGCGCCGCCC
CCTCACGAAAATCCTGGACGATGCCTATATAGGAAAAAAAAAAGAGGACCCCGATTTCGCCTCGCACTTCCTCTCCAAGT
CCCTCTCCTCCTCCGATCCTGCTCCCCACCCCCCGCAGCAGATTCCCGGCGGCA------CCCCACCCCAGCCTCCCCCT
ATACATAGACGGCATCCTCCTCTCCCCGGACGCGCGTCTGACCTCACCTCGCTATATTTTCCGTGAGCCCATTCTGCCTC
GTG---------CGCCCGCCCG-----TCCGCCCGTGCCACCACCACCATCCGTT-AACGGTTGTTGGGCCGCGCCTTCG
GTGCCGAGGAGAGAGAGAGAGAGAGAGGACGAGGGGCGGCCAGGAGGAGG------------------------------
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-----------------------------------------AGTAGGAGGAGGGGGAGCAACGGCCTCCGCGCGCCACCG
GCGAGAGCGAGCGAGGGAGGAGGAGGGGCGGTTGGTTGATCGATCGGTCAAGG--------ATAATATGATGGCGTTCAG
GGGGCAGAGGCCGGCGCAGTCCGAGGAGATGTGCGACGCGGCGGCGGCCGTGGTGGCGGCGCGGCAGGGCATGGAGCAGC
CGCTCACGGCCGTGGCCGAGGCGTTCGAGGAGCTGGCGCGCGGGATGGAGGCCGACGGCGGCGAGCTCCGCCTCGCCCCC
TTCGGCGACACCTGCGCCCTCGTCTCCGTCCTCTTCAGCTCCCTCGGCATCGCCTTCAAGTTCGCCGAGAGCGAGTACGT
CACCAAGGTAAAAACC-AAACCGATCTCGCCTCTTTTTCCCCTCCGGTAATTCGGAGTCCCTTCGATCTGTTATTGTTAT
TCTTGGAGACGAA---GTCTCGAGATTCCGCATGGCGATCAGATAGAAAAATCGCATTACCTGCTCCGTTTCC-------
-------------------------------------AAGAAACAAAGCTCTGTTTTGTGTTTGACTTTGGTAAAATTTT
GTACTCCTGTCCTGCCATGGCATCTTTGCAGCGTCGCTCGCAATTGATCGAATATTCTCTCCC-----GTTCTCATTGCG
ATTAGAAAGTAACCACACAAACATGGGCAAGCTTTTAGGATTCCCCAACAAGATTGTTTGCAAGAAAGAAA-TGCAATCG
ACGATCGTTTTTATTCTCTTTTTGTTCGGTCACGACCACGACCTGTAGTAGAAAGAAAGAAAGAAA----TGTAACCCAA
CTTTTTGCTCGGGTGAACCGTCCAGGTGAACGACCTCATCGGGGCATCAAAGGAGTACGCGACGCTGAACGACATCCTGG
ACAAGGACGTCGAGAACGACTCCGTCAAGAAGCAGGGCAGCCATTCCCGGAACCTGCGCCGGGTCCGGCTCGGCCTCGGC
CTCATCAAGGCCCTCTTCGAGCAGTTCCTCGCAACCGAGTACGTTTCTCCATTCACTCACTCATTCGTTCGTTCCAGCAG
AGCACAAATTTGTCAGCTTGCTCTCCTCCGCTGGCAGCAGCAGC---AAATG------CTTTGTGCAGCAATCAATGGTG
GTTCATCATCAGTTTGTTGCTAATAAAATCATCATTGATGAGGCCAACATACGGACGGACGACAACTTACAATCTCTCTG
GCGTCTAATTTTTCAGGGGCGGCTCGTTGTATGATGCTGCGACGACGGCCTATGGCCAGGTTTGCGCCCCGTTTCATAGC
TGGGCGATCCGAAAGGCGGTTGGCGCCGGGATGTACACTCTCCCCAGCAGAGAGCAGTTGATAATGAGGCTGAACGAAAC
TGGTAAGCAAATGATTTGACATCCATCACCATCAGAGGATACCTACCTTAACTTATATTCAGTGATAGTTTAATGCTTTC
ATCAGATGATATG---TTGATTGATAGGTCAATAACGAAATTCTGTCAAGCACCTTGACTTGTCTAGGGATATTATTGGT
AGACCAATAATCCAATTCTGTCTGTGTGTGCTTGCAGATTGCTCTGTGCAGAAGGAGATGCGGAGATACATTGATGCATC
TAGTCCCATTATAGAATACATCGATAACCTGTTCCTCTCTAGGAACATTGTCCTAGATTGGTGAACTGAATCGAGGATCA
TGCTTGCAGCTCTCCTCACGAGCTGCTAATGATGTCATTGTTTTATTGTTTTTCTCTCGTAGCTTTCTAGCCTTGGTGGG
GCTGTGAATGCTCTCCCTTCGCACTGTCTCTTGTACTGTACGATTATATCAAAAATCTAATTCTAAACGAAGAGGCGGTT
CTAGTATGATCATGCTATTCTTATGCTTCCTACTCGTATTACACACCGGACAACTTGTTGATCACAAATTAAGGAAATGA
GAGCAGGGAGTCCTGAAAGAAGAGTAGTTTTTGGTAACAATTGTACGTGCATGTTATGGTTGTCTTCGTACTTGTACAAG
AGCAAACAAGAGCCGAATTGTTTAGCGGGGTTGTC---------------------------------------------
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---------AAAACGCAAGAACAAAAAAAAGTT---GAAGTG-----CAATATAAATTTGAATTAAAAGGCTTTTGATGC
CATAGTCCATAGCAAAAACAACCAGTCATAGTAGGAGATGGGTTGTGAATTTTCGTCGAGAAGTATTCAAAAGGATCGAA
ACTCTACAAAGAAGAGTCCTCATA-CTAGAAGGCGTCGTAGTCTCCAAAGGGGGTTAAGTCAAAG---------------
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>SNPs
----S---S-------S--S----------S--S----S-S---S------SS---------S--------S-------S
----S-----S---------S-----------------------------SS---S--------S---S--------SSS
SS-SSS--------------------------------------------------------------------------
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------------------------------------S---S---------------------------------------
--------------S----------------------------------------------------------------S
------------------------------------------------------------------------------S-
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--------------SS-SSS--SSSSS----------------------------S------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------S-----------------------------
-----------------S--------------------S-S-S-S-S--SSSSSSS-S-S--------------------
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----------------------S--------------------------------------S------------------
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----------------S-----------S-------SS----SS-------------S----S--S--------------
---------S---SSS----------------------------------------------------------------
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-------------------------S--------------------S-------------S-------------------
-------------------S-------------------S-----------------S-----------------S----
S---------S-------S------------------------------------------------------S------
------------------------------------------------------------S-----S-------------
----------S---------------------------------------------------------------------
--------------------------------------------------SS----------------------------
----------------------------------------------------SSSSSS----------------------
---------------------------------S--------------------------------------S-------
------S-------------------------------------------------------------------------
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----------------------------------------------------------------------S---------
---------------------------SS---------------------S-S------------------------S--
-----------------------S--------------------------------------------------------
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-------------S------------------------------------------------------------------
----------------S--------------S------------------------------------------------
--------------------------------------------S---S-------------------------------
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-----------------------------SSSSSSS---S-------------------S--------S-----------
------------------------------------------------------S-------------------------
------------------S----------------S--------------------------------------------
-----------------------------------------------------S-S--------SSSSSSSSSSSS----
-S--------------------------S----S----------------S--S--------------------------
S---------------SSSS-------------------S-----S---SS---S-SSS-------------------S-
-----------------------------S-------------------------------------S------------
--------S------------------S-----------------------S-S--------------------------
-----SS---------S-S---S-----------S---------S-------------S------------
>forward_2454
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----------------------------------GTTGGTTGGTTGATCGCTCG--------------------------
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>reverse_4174
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-------------CCCCTTCGCACTGTCTCTTG-----------------------------------------------
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