>input_sequence_48844
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---------------------------TCGCCCGCCCCGACCCCCCTCTCTCCCCTCGCCTCTCAA-ACGCACAAGAGAA
CAAACGCCGGCGTGTGCTGCAGACATGGGTAACTGCCAGGCGGCCGACGCGGCGGCGGTGGTGATCCAGCACCCGGCCAG
CGGCCGCACGGAGCTGGCCTACTGGTCGCTCCCGGCCGGGGAGGTCATGGCCGCCAACCCGGGCCACTACGTCGCCGCCG
TCATCACCGCCCCG--CACACCGCC---TCCGAGGGGCCCGGC-------------GCCGCCCCGCCCGTCAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCTTCCGAT
ACCACCAA----GCTCCCGCCGCCCCCTTCGATCGCTTGCGTT-------GAGACGCCGCGCCG-AAAATGTTTCCCGGC
GTTAACTTGTTGCGCGTGTACGTTCGTA--------CCTTCGATTGCGACGGGCGAGGGAGGGATTAATCTGCGATTCCC
GCCTCTCGCCGTCCGATTAAATGCCGTTTTTTGACTACTCGTGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGCCGAGCTGGCGTTCTAGGTGTCACCGTACTCCATTATTTGCTAGTATCGTC-TTTCCTATTCTGTTCCCACCGAGG
AGTAACTAACGAGATCTTCTCCATTGATTGGTGCTATGCGG----CGATCAAACAGAGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGCCAAGGACGATGTG---GCG---CCCACGAAGCCGGCCAAGCCC
AGGCGCCGGCGTGGCAGCA---------GCGGCGCCGACGCCGGCGTCGTGCGCGAGGAATCCGACCGGTCGCTCGCAAA
GGTGCGTTCGCATC--TCTCCCAGTTTCCGAATGTTCACTCGCACATGCATTGCAACCACCGGCTCGCCCCAAAATCTTT
-TGTGATCCGTTCGGTCGCCGTCGATGGAGATCATGGATCGATCCATCGCAGCTCCTACGAATATCTTCGTCGCATTGAA
CTGCCAGTCCTCGTCATCGCTGTCCAAACTAGTTAATGCAGCGAAACGGCCGTGTCACCAACCCTGCA-CTTTTCTCTCT
CAATCCAGATCATGCGCCAGTCGGTGGAGGAGGAGGAGAAGGAGGCCGCGGCTGGACCGACCTCCGGCCCCGTGCCGAAG
CCAGGAGCAGACGACAACAATGGCGTCGCGGCGTCCGAGCCCGGCCT---CGACGACGACGACGACGACTGCGACCTGGA
GTCGCTGCTGCCGCCCGGCCTGGCCCTCGGCAGGCGGCTCGGCCCGCAGTGGCGGCCGGCCCTGCAGAGCATCGCGGAAG
GGCGAGACTGAAGCCGG--AGTACACGGCCGGATCAGACGCACGGCTCCGTCTCTCTCTGTGTGTATGTATGTGTAAAAT
GTACTCGGGCTGTACCAGCTGGGG--CGTGTTGCGTAGCTGCGGCTCCAGATGCCTAGTGGTAGTA---GTGCTAGTAAC
TGTGCAAGTATGGGTCACTGGGTGTAAAAGTGTGTAACG-----------------------------------------
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>chr4B_1_TraesCS4B01G260900
ATTATTTGAGGTTTCTCTATAAACAATTTGATTTCCCTTCTTTCGAAAACCTGCCCTGTGGAGCCCCAAATTTCCAAGAA
GAATTCTCTCATTGCTTGGTTCATAATAAACATGGTAACTGTTCATGTCCATTATTTGCTTCAGACAAAAGTATAATTTC
GGTCGCTCGGGTTTACTGAAAGTCTACATCTAGCACTCTCAATTGTTTTTGGGTGACATTTAGTCCCTTGAGTCTAAAAA
CCGGATATGTTTCATCCAAAACCAAATTGTCTTCATATTTTCAAAAAAAATAAAATCTATGCTTGTCACAGTTTTGGTTG
CGAACCAAACGTGCTCCAAGTTT--CCCCTTAATCCACCATTGGGTCCTTGCCAGGGGGGCCTTGTGTCCTTCGTGGACT
T---------CTCTGCCTGCCCATCCTCATTCCACACTTTCCAAGCAGTCCTATGCATAGTTCTAAAAAAACAGATC---
----------------------CATTGTTCTTGTAAACTTGACATTAACTTTAGGACAATTTTTCATCA-TTTTTGTACG
CTTGCCACATTTTGGTAGACCACCAAACACGCTCAATATTTCCCCACTA-------------GTTTTGGTACTCTCCCCG
GTTTGTCTCATTCATGCCACCACACCCCTCGACCGGTCGAGCCGCACCCGGCAATCCCACACACGCGAGAGCCAGAAAAA
GGCAA-----CGGGCGATTCGCCGGCCTGCATCGCTTAATGCGTGCACGGTCAAGTAACGTGGATTGTAGCTAAATTCGG
CACACCGGCCCGGTCGAGTTAGGCGTCGACCCGCTGGGCGGGAGAGAAATACC---ACTTCCAATTATTAACTCCGGCCA
CACACAGCCGG---------CCGCACGTATCTCTCTCCCCCTCTCTCTCTCCTTTCCTTGTAAACATCCGAGACCTTGCC
AAGTAGAGTACATACCGTGCTACAGCACCCATCGGCATCGACGGCACCAGCCGGGCGCGGAACCGCCTTATTATAAAACG
GTCGCCACTGCCACCTGCGACGGTCACTCGCCCGCCCCGACCCCCCTCTCTCCCCTCGCCTCTCAA-ACGCACAAGAGAA
CAAACGCCGGCGTGTGCTGCAGACATGGGTAACTGCCAGGCGGCCGACGCGGCGGCGGTGGTGATCCAGCACCCGGCCAG
CGGCCGCACGGAGCTGGCCTACTGGTCGCTCCCGGCCGGGGAGGTCATGGCCGCCAACCCGGGCCACTACGTCGCCGCCG
TCATCACCGCCCCG--CACACCGCC---TCCGAGGGGCCCGGC-------------GCCGCCCCGCCCGTCAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCTTCCGAT
ACCACCAA----GCTCCCGCCGCCCCCTTCGATCGCTTGCGTT-------GAGACGCCGCGCCG-AAAATGTTTCCCGGC
GTTAACTTGTTGCGCGTGTACGTTCGTA--------CCTTCGATTGCGACGGGCGAGGGAGGGATTAATCTGCGATTCCC
GCCTCTCGCCGTCCGATTAAATGCCGTTTTTTGACTACTCGTGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGCCGAGCTGGCGTTCTAGGTGTCACCGTACTCCATTATTTGCTAGTATCGTC-TTTCCTATTCTGTTCCCACCGAGG
AGTAACTAACGAGATCTTCTCCATTGATTGGTGCTATGCGG----CGATCAAACAGAGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGCCAAGGACGATGTG---GCG---CCCACGAAGCCGGCCAAGCCC
AGGCGCCGGCGTGGCAGCA---------GCGGCGCCGACGCCGGCGTCGTGCGCGAGGAATCCGACCGGTCGCTCGCAAA
GGTGCGTTCGCATC--TCTCCCAGTTTCCGAATGTTCACTCGCACATGCATTGCAACCACCGGCTCGCCCCAAAATCTTT
-TGTGATCCGTTCGGTCGCCGTCGATGGAGATCATGGATCGATCCATCGCAGCTCCTACGAATATCTTCGTCGCATTGAA
CTGCCAGTCCTCGTCATCGCTGTCCAAACTAGTTAATGCAGCGAAACGGCCGTGTCACCAACCCTGCA-CTTTTCTCTCT
CAATCCAGATCATGCGCCAGTCGGTGGAGGAGGAGGAGAAGGAGGCCGCGGCTGGACCGACCTCCGGCCCCGTGCCGAAG
CCAGGAGCAGACGACAACAATGGCGTCGCGGCGTCCGAGCCCGGCCT---CGACGACGACGACGACGACTGCGACCTGGA
GTCGCTGCTGCCGCCCGGCCTGGCCCTCGGCAGGCGGCTCGGCCCGCAGTGGCGGCCGGCCCTGCAGAGCATCGCGGAAG
GGCGAGACTGAAGCCGG--AGTACACGGCCGGATCAGACGCACGGCTCCGTCTCTCTCTGTGTGTATGTATGTGTAAAAT
GTACTCGGGCTGTACCAGCTGGGG--CGTGTTGCGTAGCTGCGGCTCCAGATGCCTAGTGGTAGTA---GTGCTAGTAAC
TGTGCAAGTATGGGTCACTGGGTGTAAAAGTGTGTAACGTGACAGATGATATGGA---CTTTTGACTAGTCCTCGAGAAC
CAAAATGACCACGCGATCAAACTGCTCGAGCCGTGGGTCGAGCGTCCCGGGCGGCGAGCC-TCCCACATTATTACGTATC
GGGAGGCTCAATCTCTTTTGATCGAGAGAGAAAGATCGGGATGCTCAATTGATC----------------TCCAGTCATA
GAG--GCTCGTTCGGGCATCTGAACAGCGGCCGGGCCAAGCGCTGAGC-G-CCATCATGCACGTGTAGCAGAGGCTATCA
TCGAACACGTGCACGGTGATCTCTGATAGTCTGATCTCCCTCGCTCC---GCAGGGGAAAGCCCAGGTTTCCTCTGCCTG
CCT------GGTCTCCGGACTGATCATCAGCTCGGCTCCGTGACAAAAGCCAGGGAGGGATTCGGCAGTGTTTCAGACGA
TGCATGGATGGACAGATGGAT-GCGTGTGGGAGATAGGTTGGGGACTGACCCGAC----CTGACCT-----GATAGAACT
TGACCGGCGACGTGATCCCCATGCTGCCCATGCACTGCAGCTGGTATCTGTATCTGCCTATCCGTCTG-----GGCGACG
CTGCACTGCAGCAGGCGTGTAGTAGCTCGGTAGCCTAGCTTCCGAGACAAGAAAAGTCGACACGAAAAGTGCCTGCATAG
ATAGCTCCCGGAGGGCAAAATTCCTGGCGCAGCAT---ATACT-GTAGGTACAGGGGCACGAGAGGCGCCGAAAGATTCG
TTCGCCTCGTTAACCTGATGGACTGATCGGAACCAGCACTGGTGCTATGGCCTGCCTAGCCGCGGCTGGAATCGTTTCGT
TTTGTTCTCCCCTGAGCATTGTGGTGTCTCATGCAACCAGT---------------------------------------
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---------------------------------------------CAGTGCAAGGCTGCATGCATTCTCCGGTCGCTCGT
CTGAAAGTCTGAAACTAATGATACTCCCGGCATTGCCGCTAGGCCGGACAGGAGAGAGATGACCCCGTCAGAGAGGATTT
GATCGAGACCCTGAACAGATAATATTTGGTCGATGATAGCAAGAATCAAACAAAG-
>chr4A_115
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----------------------------------GTAACTATTAATGTCCATTATTTGCTTAAGAGAAAAGTATAATTTC
GGTCCCTCAGGTTTACTGAAC----------------CTCAATTGTCTTTGGGTGACATTTAGTCCGTTAAGTCTCAAAA
CCGGAAAAGTTTCGTCCAAAACCAAATTGTCTTCATATTTTCATTTTTTCCTACGA------TTGTCCCAATTTTGGTTG
CGAACCAGACGTGCTCCAAGTTTTCCCTCTTAATCCACGATTGGGTCCTTGCCAGGGGG-CCTCGTGTCCTTGGTGGCAC
TACGTACGTCCTCTGCCGGCCCATCCTCATTCCACACTTTCCTAGCAGTCCTATACATATACGTATAGTACATACATACA
TATACATAACATGTTACAGATTCATTGTTCTCGCAAGCTTGACATCAACTTTAGGACAATTTCTAATCATTTTTTGTACG
CCTGCCACATATTGGTAGACCACCAAACACGCTCAACATTTCCCCACTGAGTAGTTCCTAGTGTTTTGGTACTCTCCCCG
GTTTGTCTCATTCGTGCCACCACACCCCTCGACCGGTCGAGCCGCACCCGGCCACCGCACGCACGCGAGAGCCGAAAAAA
GGCAACGCAACGGGGGACTCGCCGGCCTGCATCGCTTGATGCGTGCACGGCCTAGTAACGTGGACTGTAGCTAAATTCGG
CACACCGGCCCGGTCGAGTTAGGCGTCGACCCGCCGGGTGGGAGGGAAATACCACCACTTCCAATAATTAACTTCGGTCA
CACAGAGTAGCCGGCCGCACCCGCACGTATCTCTCTCTCTCT--------------------------------------
----------------------------CCATCGGCGTCGACGGCACCA---------------GCCTTGTTATAAAACG
GTCGCCGCTGCCACCTGCGACGGTCACTCGCCCGCCCCCGACCTCCCGAC-CCCCTCGCCTCTCGA-ACGCACGAGGGAA
CAGACGCCGGCGTGTGC-AGAGCCATGGGTAACTGCCAGGCGGCCGACGCGGCGGCGGTGGTGATCCAGCACCCGGCCAG
CGGCCGCACGGAGCTGGCCTACTGGTCGCTCCCGGCGGGCGAGGTCATGGCCGCCAACCCGGGCCACTACGTCGCCGCCG
TCATCACCGCCCCG--CACGCCGCGTCTTCCGAGGGCCCCGGC-------------GGCGCCCCGCCCGTGAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCGTCTGCC
GCCTCCAAGCTCGCTCCCGCCGCCCCCTCCGATCGCTTGCGTT-------GGGACGCCGCGCCGAAAA-TGTTTCCCGGC
GTCAACTTGTTGCGCGTGTACGTGCGTA--------CCTTCGACTGCGACGGGCGAGGGAGGGATTAAGCTGCGATTCCC
GCCTCTCGCCGTCCGATTAAATGCCGTTTTTTGACTACTCGAGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGGCGAGCTGGCGTTCTAGGTGTCACCGTGCTCCATTATTTGCCAGTATCTTC-TTCCCTATTCTATTCCCGCCGAGG
AGTAACTAACGAGATCTTCTCCATTGATTGGTGCTGTGCGGCGATCGATCGAGCAGAGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGCCAAGGACGAGGTG---GCGGCGCCCACGAAGCCGGCCAAGCCC
AGGCGCCGGCGTGGCAGCAGCGGCGGCGGCGGCGCCGACGCCGGCGTCGTGCGCGAGGAATCCGACCGGTCGCTCGCAAA
GGTGCGTTCGCATGCTTCTCCTAGCTTCCGAATGTTCACTGGCACATGCATTGCAACCACCGGCTCGGCCC-AAATCTTT
-GGTGATCCGTTCGGTCGCCATCGACGGGGATCATGGGCCGATCCATCGCGGCTCGTACCAATATCTGCGCCGAATTG-A
CTGCCAGTCCTCGTCATCGCTGTCCGAACTAGTTAATGCCCCGAAACGGCCGTGTCACCAACCCTGCG-CTTTTTCCCTT
AT-TCCAGATCATGCGCCAGTCGGTGGAGGAGGAA------GAGGCCGCGGCCGCACCGAGCTCCGGGCGCGTACCGAAG
GCAGGAACAAACGACAACAATGGCGTCGCGGCGTCCGAGCCCGGCCT---CGACGACGACGACGACGACTGCGACCTGGA
GTCGCTGCTGCCGCCCGGGCTGGCGCTCGGCAGGCGGCTCGGCCGGCAGTGGCGGCCGGCCCTGCAGAGCATCGCGGAAG
GGCGAGACTGAAGCGGAGTAGTACACGGCCGGATCAGACGCACGGCTCCGTCTCTCTCTGTGTGTATGTATGTGTAAAA-
----------------------------TGTTGCGTGGCTGCGGCTCCAGATGGATGCC--TAGTGGTAGTAGTAGCAAC
TGTGCAAGTATGGGTCACTGGGTGTAAAAGTGTGTAACGTGACGGATGATATGGA---CTATTGACTGGTCCTCGAGAAC
CAAAATGACCACGCGATCAAACTGCTCGAGCCGTGGGTCGAGCGTCCCGGGCGGCGAGCCCTCCCACATTATTACGTATC
GGGAGGCTCAATCTCTTTTGATCGGGAGAGAAAGATCGGGATGCTCAATTGATCGATCGATCGATCGATCTCCAGTCAGA
GGCCTGCTCGTTTGGGCATCTGAACAGCGGCCGGGCCAAGCGCTGAGCAG-CCATCATGCACGTGTAGCAGAGACTATCA
TCCAACACGTGCACGGCGATCTCTGATAGTCTGATCTCCCTCGCTCCTCCGCAGGGAAAAGCCCCGGTTTGCTCTGCCTG
CCT------GGTCTCTGGGCTG---ATCTGATCAGCTCCGTGACAAA-GCCAGGGAGGGATTCGGCGGTGCTTCAGACGA
TGCATGGATGGAGGGACAGATGGCGTGTGGGAGATGGGTCGGGGACTGACCCGAC----CTGACCTGACCTGATCGAACT
TGACCGGCGACGTGATCGCCA---TGCCCATGCACTGCAGCTGGTATCTGTATCTGCCTGTCCGTCTGGAGACGGCGACG
CTGCACTGCAGCAGGCGTGTGGTAGCTCGGTAGCCTAGCTTCCGAGACAAGAAAAGTCGACACGGAAAGTGCCTGCATAG
ATAGCTCCCGGAGGGCAAAATTCCTGGCGCAGCATATGCTCTACGTACGTGCAGGGGCACGTGATGCGCCGAAAGATTCG
TTGGCCTCGTTAACCTGATGGACTGATCGGAGCTAGCACTGGTGCTATGGCCTGCCTAGCCGCGGCTGGAATCGTTTCGT
TTTGTTCTCCCATGGGCACTGTGGTGTCATGTAAGGTCAACTACACCGCGCGATCCTATCCTATCCGGCCCCATCCGTTT
GAGATAAAATGGACAAAAAAGGCGGCCCAGCGCGCAAGAGCAAACGGACTTTTGTCCGTTTTGTGTCCGCTTTCGACCCA
TCCTTGACCCAAACTTGCGCCGGTTTTGGGGTGAAACGGACAGCGCGCGGACGGGCGGGACGCGCACGCTTGTCCTCCCC
TGGCCCGCCTGTCGGTGGGAGAAACCAAAAACCCCCCGACGGCCATTTGGCGCCATTTCCCCCAAACTCTCCCACGTCCC
TCCCGCCCCCCCTCTCTCCTCCGTCCATGGCCGACGCCCCGCCGAGTTCCGGCGGCCTGGCCATCGACCCGACCGCAAAG
GTGAAGAAGAAAGCGCCAAGGAAGCCGCGGTCGGAGTACACGTCGGAGGAGATCGCCAAGTTGGACGCGAAATCGGCGAA
GAGGAGGGAACGGAGAGCGGCCGTCAAGATGAATGCCGCCGCGGCCAAGTTTGTCGCCCAGTGCGAGGAGCTGGAGGCCG
CGCGGCGCAAGGCCGCTGCCGACGAGAAGGAGGACCTCGTCAACAAAGCACACACCATCCTCATGCTTGGCATGGGCCGT
CCGACGGGGTTCCATGCAGCGGCCGTCGGCCCGGCGAGCACAGACTCGTCGGTCGCCCGGCCTACGCACTGCCAGTCGCC
GACGTCGCGCGCCGGCCCATGTCGCCCGGCTTTCCTCCACCCAGGCACGACGGCCATACCCGTTTCTCGGCGTCGCCGGA
CGTGGGCTTGTTCGCGCTGTCCACACCACGCCCCGCGGCCGTCATCAACCTCAACGTGACGCCTGGGTCCAGCAGCGGCG
GGCGGCCTTCCGTCGAGATGCAAAGAAAGCAGGCGCGTGCACCGTTCACGGGCACCATGCTGGCCCCCCGCGTGTTGTTT
GACGAAATGCCAACCTCAACGCCGACGGTGGACGACCCCTTCTACAACCAGTACATGGAGGACGTGATCTTCCAGGGTGG
GCATGGCCGTGCCTACGACCCCGATGAGACCCAAAGTCAGGATGGCCGCGCCCAGTACGTGCCCGATGAAGAGGCCGACG
ACCGTGCTGACTACGACCATGGTGATTCGTGGCATGAAGACGATGACATCTATGTCGAAGGTGAAGATGAAGATGAAGCC
AATGATGTTGATATTAGTGGCGCTCCATTGTTCATAGACGAGCTCACCCAAAGAGCGGAAGCACAAAAAAAGCGGAAGAG
CATTCGCACCGGTTCATATACACAAGATGAGGACAATGATTTGCCAATGTTGGATGGAGATTAGCCAAGATCCAAGGACC
GGCGCGCAACAAAAGGGCATTGTTTTTTGGACGGGAGTCCACAAAACATTCCATGAAAGGAAGATGTTTGAGCCCTACCA
AATTACAAGCAACCGTGGCATCGGTTCGATTAAAAAAAGATGGTTGTTCATCCAACAAGAGTGCAACAAGTATTGTGCCG
CACTTGAGAGCGTTGAAGCACGGCCCGTGAGTGGTCTCGGCGTTGGAGACATGGTATGTTTTTCTCTTTCTAGCCCTTAC
TACGGCCATGAGACTTCGGTCGTGTATATGTTTGCATGTTCACTTGTTGTTGATCATGTGGTGTAGGCATTTCAATTTGG
AGGCATTTAAGGCCCGGCACAATGACAAGCCATTCACTCTTACGCATTGTTGGACGATCATCAATAATTGCCCTCAGTTC
AAGGATCAATACCGTGAACTTCAAAGGAAGAGAGGCAAGAAGACGGTCAAGTTCGCCGGAGGTGGGGATGGCGAGGCGTT
GAAGAGGCCGAGGGGCAAGACCAACTCAAAGGTGGACGACATACGTGACACCTCATCCATGGCCTTGCATGAGACTTTGC
ATGGCATGATGTCACATAAGGATGTGAGGGACGAGAAGGAGCGGCAAAGCAAGGACGAGCAAATGAAGCAATACCTAGAC
CTCCAACGACAGAAGCTTAAGATGGAGGAGGCGGCCAAGAAGAGGAAGATAGACATGAAGGAGACGGCCCGACAAAGGCA
GCTCGACATGGAAGAGGCCGCCCGGCAAAGGCAGTTCGACATCGAGGCCGACAACGTCAAGGCCAGGCAGAGGCAGCTCG
ACATCGAGGCCACCAATGCCGCCACCAAAGCGAAGGAGGTGGCCCTTGCGATCATGAGCGTGGACTTGTCGAAGATGAGC
GACAAGACGAAGGCCTGGTTCGAGGCCAAGCAGAAGGAGATGCTCGACGCCGAAGGCCTGAACTAGGTCGTCCGATCGGC
GTGGCCGTTCTTTTTGGAGGCTGGCATGGGTGCCGCCCGCCCGCTGGGCCGCTGGTAGTGTGCCGGCGAAAAAACATTCA
TTTTGGAGGCCGGCTGTGTTGCCGGCCGCTGGTTGTGTTGCCGGTGAGGACAACTATTCATTTTGGAGGCTGACTGTGTT
GCCGGCCGTTGGCTGTGTTGCCGGCGATGGTCGTGTAGGCCGCTGGCTTTGTTGCCGACGTGATGAACTCGGGTCGTGAA
CTGGGGCTTGGCATTTGAAACGTCCTTTTTTTTTTAAATAGACGCGGACAGGATGGGGCAAAAGGATGCGGCCGGGCGCT
GGGCGCACGACCACCGCATCTCAGGACAGACCCGGATACGACCCGAAATCCCTACCCAAAAAGACAAAAATCGAACAAAA
CGAACGTCCGTTTAGGATTGCGCGGTGGAGTTGGCCTAACCATGCCAGTGCAAGGCTGCATGCATTCTCGGGTCGCTCGT
CTGAAATTG--------ATGATACTCCCGGCATTGCCGCTAGGCCGGACAGGAGAAAAATGACCCCGTTAGAGAGGATAT
GATCGAGACCCCGAACAGATAATTTGGTCGATGCTTTGTAGCAAATTCAAACAAAG
>chr4D_581
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----------------------------------------------------------------------ACTCTCCCCG
GTTTGTCTCATTCGTGCCACCACACCCCTCGACCGGTCGAGCCGCACCCGGCCACCCCACACACGCCAGAGCCAAAAAAA
GGCAA-----CGGGGGATTCGCCGGCCTGCATCGCTTAATGCGTGCACGGTCAAGTAACGTGGATTGTAGCTAAATTCGG
CACACCGGCCCGGTCGAGTTAGGCGTCGACCCGCTGGGTGGGAGAGAAATACTCCT------AATAATTAACTTCGGTCA
CACTTAGCCGG---------CCGCACGTATCTCTCTCCCGCAGTAGGCGGCCA---------------------------
------AGTACATACCGTGCTACAGCAGCCATCGGCATCGACGGCACCACCCGGGCGCAGAACCGCCTTGTTATAAAACG
GTCGCCACTGCCACCTGCGACGGTCACTCGCCCACCCCGACCCCCCTCTC-CCCCTCGCCTCTCAACACGCACAAGGGAA
CAAACGCCGGC--GTGC-GCAGGCATGGGCAACTGCCAGGCGGCCGACGCGGCGGCGGTGGTGATCCAGCACCCGGCCAG
CGGCCGCACGGAGCTGGCCTACTGGTCGCTCCCGGCCGGGGAGGTCATGGCCGCCAACCCGGGCCACTACGTCGCCGCCG
TCATCACCGCCCCG--CACACCGCC---TCCGAGGG---CGGT-------------GGCGCCGCTCCCGTGAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCGTCCACC
GCCTCCAAGCTC----CCGCCGCCCCCTCCGATCGCTTGCGTT-------GAGACGCCGCGCCG-AAA-TGTTTCCCGGC
GTTAACTTGTTGCGCGTGTACGTGCGTAC----GTGCCTTCGATTGCGACGG-------------------GCGATTCCT
GCCTCTCGCCGTCCGATTAAATGCCGTTTTTTGACTACTAGAGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGCCGAGTTGGCGCTCTAGGTGTCACCGTACTCCATTATTTGCTAGTATCCTC-TTTCCTATTCTATTCCCACAGAGG
TGTAACTAACGGGATCTTCTCCATTGATTGGTGTTGTGCCACGATCGATCAAGCAGAGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGCCAAGGACGAGGTGGCCGCG---CCCACGAAGCCGGCCAAGCCC
AGGCGCCGGCGTGGCAGCAACGGCGGCGGCGGCGCCGACGCCGGCGTCGTGCGCGAGGAATCCGACCGGTCGCTCGCAAA
GGTGCGCTAGCATC--TCTCCCAGTTTCGGAATGTTCACTCGCACATGCATTGCAACCACCGGCTCGGCCC-AAATCTTC
-TGTGATCCGTTCGGTCGCCGTCGATGGAGATCA---------------------------ATATCTTCATCGAATTGAA
CTGCCGGTCCTCGTCATCGCTGTCCAAACTAGTTAATGCCCCGAAACGGCCGTGTCACCAACCCTGAACCTTTTCTCTCA
AAATCCAGATCATGCGCCAGTCGGTGGAGGAGGA---GAAGGAGGCCACGGCTGGACCGACCTCCGGCCGCGTGCCGAAG
CCAGGAGCAAACGACAACAATGGCGTCGCGGCGTCCGAGCCCGGCCTCGACGACGACGACGACGACGACTGCGACCTGGA
GTCGCTGCTGCCTCCCGGCCTGGCCCTCGGCAGGCGGCTCGGCCCGCAGTGGCGGCCGGCCCTGCAGAGCATCGCGGAAG
GGCGAGACTGAAGCGGAGTACACGACCG-CGGATCAGACGCACGGCTCCGTCTCTCTCTGTGTGTATGTATGTGTAAAAT
GTACTCAGGCTGTACCAGCTGGGGGGCGTGTTGCGTAGCTGCGGCTCCAGATGCCTAGTGGTAGTAGTGGTACTAGTAAC
TGCGCAAGTATGGGTCACTGGTTGTAAAAGTGTGTAACGTGACAGATGATATTACGCTCTTTTGACTGGTCCCCGAGAAG
TAAAATGACCACGCGATCAAACTGCTCGAGCCGTGGGTCGAGCGTCCCGGGCGGCGAGCCCTCCCACATTATTACGCATC
GGGAGGCTCAATCTCTTTTGATCGAGCGAGAAAGATCGGGATGCTCAATTGATC----------------TCCAGTCAGA
GGCTG----GTTCGGGCATCTGAACAGCGGCCGGTCCAAGCGCTGAGC-GCCCATCATGCACGTGTAGCAGAGACTATCA
TCGAACACGTGCACCGTGATCTCTGATAGTCTGATCTCCCTCG---CTCCGCAGGGGAAAGCCCCGGTTTCCTCTGCCTG
CCTCTGCCTGGTCTCTGGGCTG---ATCAGCTCGGCTCCATGACAAA-GCCAGGGAGGGATTCGGCAGTGTTTCAGGCGA
TGCATGGATGGACAGATGGAT-GCGTGTGGGAGATGGGTTGGGGACTGACCCGACCTGACTGACCTGACCTGATCGAACT
TGACCGGCGACGTGATACCCA---TGCCCATGCACTGCAGCTGGTATCTGTATCTGCCTATCCATCTG-----GGCGACG
CTGCACTGCAGCAGGCGTGTAGTAGCTCGGTAGCCTAGCTTCCGAGACAAGAGAAGTCGACACGAAAAGTGCCTGCATAG
ATAGCTCCCGGAGAGCAAAATTCCTGGCGCGGCGTATGATACT-GTACGTACAGGGGCACGAGAGGCGCCGAAAGATTCG
TTGGCCTCGTTAACCTGATGGACTGATCGGAACTAGCACTGGTGCTATGGCCTGCCTAGCCGCGGCTGGAATCGTTTCGT
TTTGTTCTCCCCTGGGCATTGTGGTGTCATGTAACCAT-GT---------------------------------------
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---------------------------------------------CAGTGCAAGGCTGCATGCATTCTCCGGTCGCTCGT
CTGAA--------ACTAATGATGCTCCCGGCATTGCCGCTAGACCGGACAGGAGAGAGATGACCCCGTCAGAAAGGATTT
GATCGAGACCCTGAACAGATAATTTGGTTGATGGATTATAACAAAATCAAATAAA-
>chr2B_1062
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---------GCGTGTGC-GCAGACATAGGTAACTGCTAGGTGGCGGACGCGGCGGTAGCGGTGATCCAGCACCTGGGCAG
CGGTCGCACTCAGCTCGCCTACTAAGCGTTCCCGGCTGGGGAGGTCATGGGGGCCAACCCGGGCCACTACGTCGCAGCCG
TGATCACCACCCCGTACACACCGCG---TCATCCGTGGGTGACGCGGCCGCGCGCGGCTGCCCTGGACGTGAAGCACCTC
AAGCTGCTCGGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCCCTTCGTCAGCCTCGAAGGTACGTCGCGTGCGAT
AACTCCAA----G-----------CCCTTCGATCGTTTGCATTGACACTTGAGGCGCCGTACCG-AAAATGCTTTCCAGC
GTCAACTTGTTAGGCGTGTATACGTATTCCGGCGGACG-----TTGCGACGCGACGA----GGATTAATCTGCGATTCGT
GCCTGTCGCCGTCCGCTTGCATGCCGTTTTCTAACTACTAGCGCGGCTG-TTTAGTGGAGCTTTATCCATAATAACTTTC
TGG-----------------------------------------------------------------------------
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>chr2D_1243
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---------------------------------------------GGCCGCGCGCGGCTGCCCCGGATGTGAAGCACCTC
AAGCTGCTCGGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCTTCGTCAGCCTCGAAGGTACGTCGCGTGCGAT
AACTCCAA----G-----------CCCTTCGATCGTTTGCATTGACACTTGAGACGCCGCACCG-AAAATGTTTTCCAGC
GTCAACTTGTTAGGCGTGTATACGTATTCCGGCGGACGG-----TGCGACGCGACGA----GGATTAATCTGCGATTCAT
GCCTGTCGCCGTCCGCTTGCATGCCGTTTTCTAACTACTAGCGCGGCTG-TTTAGTGGAGCTTTATCCATAATAACTTTC
TGGACTGAGT-----------------------------ATTTGCTAGCATCGTCTTTTCCTATTCTATTTCCACTGAAG
AGTGATTAACGGAATCTTATGCATTAATCTGTGTTGTA-----------CGAGCAGAGGTGCTGAAAGAGTTCGCGACGA
AGCGAAACGTCAAGCTCAGCCGCGTCATGGTCAAGGCCAAGGAGGAGGTGGT------GGCGACGAAGCCGGCCAAGCCT
AGGCGCTGGTT--GCAGCA---------GCGCCA------------TCGTGCGCGAGGAATCCGACCAGTCGCTCGCAAA
GTTGTGTTCACATT--TCTC------------------------------------------------------------
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>chr7D_1254
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-----------------------------------------------------------GCCGCTCCCGTGAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCGTCTACC
GCCTCCAAGCTC----CCGCCGCCCCCTCCGATCGCTTGCGTT-------GAGACGCCGCACCG-AAAATGTTTTCCGGC
GTTAACTTGTTGCGGGTGTACGTACGTACTGGAGTACCTTCGATGGCGACGGGCGAG----GGATTAATCTGCTATTCCC
GCTTCTCGCCGTCCGCTTAAATGCCGTTTTTTGACTACTAGAGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGCCGAGCTGGCGTTCTAGGTGTCACCGTACTCCATTATTTGCTAGTATCTTG-TTTCCTATTCTATTCCCACCGAGG
AGTAATTTACGAGATCTTCTCGATTGATTGGTGTTGCGCCC----CGATCAAGCAGGGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGTCAAGGACGAGGAG---GTGCCGGCGACGAAGCCGGCCAAGCCT
AGGCGCCGGCGTGGCAGC---GGCGGCGCCGGCGCTGACGCCGGCGTCGTGCGCGAGGAATCAGACCGGTCGCTCGCAAA
GGTGCGTTCGCATGCATCTCCCAGTTTCCGAATGTTCACTCGCACATGCATTGCAACCACCGCCTCGGCCC-AAATCTTT
TTGTGATCCGTTCGGTCGCCATCGACGGAGATGATGGACCGATCCATCGCAGCTCGTACCAATATCTTCG----------
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>chr3D_1254
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-----------------------------------------------------------GCCGCTCCCGTGAAGCACCTC
AAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGGTACGTCGCGTCTACC
GCCTCCAAGCTC----CCGCCGCCCCCTCCGATCGCTTGCGTT-------GAGACGCCGCACCG-AAAATGTTTTCCGGC
GTTAACTTGTTGCGGGTGTACGTACGTACTGGAGTACCTTCGATGGCGACGGGCGAG----GGATTAATCTGCTATTCCC
GCTTCTCGCCGTCCGCTTAAATGCCGCTTTTTGACTACTAGAGCGGCGGATTAAGTGGAGCTTTACCCGTAATAACTTTC
TGGGCCGAGCTGGCGTTCTAGGTGTCACCGTACTCCATTATTTGCTAGTATCTTG-TTTCCTATTCTATTCCCACCGAGG
AGTAATTTACGAGATCTTCTCGATTGATTGGTGTTGCGCCC----CGATCAAGCAGAGGTGCTGAAGGAGTTCGCGACGA
AGCGGCACGTCAAGCTCAGCCGCGTCATGGTCAAGGTCAAGGACGAGGAG---GTGCCGGCGACGAAGCCGGCCAAGCCT
AGGCGCCGGCGTGGCAGC---GGCGGCGCCGGCGCCGGCGCCGGCGTCGTGCGCGAGGAATCAGACAGGTCGCTCGCAAA
GGTGCGTTCGCATGCATCTCCCAGTTTCCGAATGTTAACTCGCACATGCATTGCAACCACCGCCTCGGCCC-AAATCTTT
TTGTGATCCGTTCGGTCGCCATCGACGGAGATGATGGACCGATCCATCGCAGCTCGTACCAATATCTTCG----------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--S-----------------S---S--------------
----S---S-----------SSSSSSSSSSSSSSSSS---------S-------------------S--S-----S----
-----S-S-----S-----------------------------SSSSSSSSS-SSSSSSSSS-----S--S---------
-------S-------------------S----------S--------------------S---S--------S----SSS
-----------------S------------------------S-----------S----SSSS--S-SS-SSSSSSS---
-------------------------------S-S--S--------S----------------S-S---------------
-S--------S-------------------------S-----------S-------------------------------
-------------S--------------------------------------S-S-------------------S-----
--------------S-----------------------------------------------------------------
--------------------------------------S--------------------------S-------S---S--
----S----------------------------------S--S-SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---------------------S---------------------S--------S----------S----------
--------------------------------------------------S-------------------------S---
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------------------------------------------S------
---S----------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------------------------------------------------S------------
-----------------------------------S----------------S---------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S---S--------
--------------------------------------S----------------S---S-------------S------
---------------------------------------SS---------------------------------------
S---------------------------------SSS--------------------------------S----------
---------S----------------------------------------------------------------------
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--------------S-S---------------------------------------------------------------
------S----------------------------------------------------------------S--------
-------------------------------------------------------------------S------------
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------------------------------------------------------------------------------S-
-SS----------------------------------------------------------------------S------
----------------------------------------------------------------S---------------
---------------S--S---SSS----------------------S--------------------------------
-----------------------------------S--------------------------------------S-----
---------------------SSS--------------------------------------------------------
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-----------------------------------------------S--------------------------------
--S------------------------------S----------------------------------------------
--------------S-------------SSS-SSSSS-------------------------------------------
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------S-SSSSS-------------------------------------------------------------------
-----------------------S-SSSSSSSSSSS--SS-SS---SS--SS--S-
>forward_963
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---------------------------------------------------------------ACATCCGAGACCTTGCC
AAG-----------------------------------------------------------------------------
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>reverse_3056
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---------------CGGACTGATCATCAGCTCGG---------------------------------------------
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--------------------------------------------------------
