>input_sequence_48837
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-------------------GCCGAGTCCCTCCCACCCATGCTGTCCTGCACCTACTAGCTGAGCTCG--CTCGTGCTCCC
CGTCCGAGCCCAGGCCGCGTTCGTGG------------GGGGCTGGATTGCTCGGCGAGCGGGCGATGGACGTCGTCGTC
GGGCTGCCGTCGTCTCCGCCCGAGTCCGGGCGCTCCTCGCCGTCTCCGACCGCGTCGCCCGAGTTCGAGTTCTGGATGGT
GGGCAAGAACCCGGGGACATTCCCCTCCCCCGCCCTGCTCACCGCCGACGAGCTCTTCTCCGACGGCATTGTGCTCCCTC
TCCACACCCTCCAGGCCCCTCCTCCTTGCCCCGACGCCGGCCAAGAC---GACGGC---GAGGAAGACGCTGAGGAAGAT
GCCGACCCCAACGTCGACGTCAACGACTCCTCGGAGCCGCCGGAGGAGGAAGGGGAGCCTGCCGCGC------AGCCGCT
TGCGGAGGCCTGCGCCGTCCCGACGCTGGACCTCCCCGCGGTCACTTTCAAGTGGAAGGACATCTTCAAGGCCACCGGCG
AGTCCAAGGAGCGCGCCAAGAAGGCGGAGCGCC---------GCGTCAGCGGCAACGCCGAGCTCATCAACATCAACATA
TGGCCCTTCTCCCGGAGCCGCTCCGCTGGCCACTCTACCTCCGGCGCCGGCGCCGGCGCTAGCAGCAAGGCCAAGGCGAG
CACTCCCAGCACCGGCAACGCCAGTGCCGCTGCTGCCAGCGCACCGGTGGCGGCTACCGCGACGGCGGCGGGGCGCAAGG
TGAGCAGCGCGCCGTGCTCCCGGAGCAACTCCCGCGGCGAGGCCTCCGGGTCGGGGGTGCCGGCCGTCGCCATCGCGGCG
GCAGCGGAAAAGGCCGCTGCGCAAGCGCCCGCCACGTCCATGCTGAGGCGGTGGGTTCCCGGCGGTCAGGGCAGAGCAGG
CTTGAGCGCGAACGGCATCCGCCTGGGAAGAGCCAGCCCAGTCTGGCAGCTGAGGCGCAACAAGCTACAGCAGCAGCAGC
AAGCCGCCGCGGAGCAGAAGCAGAGCAGCAACGC------CACCGCCAGCGGCAAGAACAAGGCCGTCCCGGAAGACGAC
---GCGGCGACGAGCCAAGTCCAAGCGGACGCCGGCGAAGCAGCAGACAAGGCGACGGCGTCCGCTGCTGCAGACGCAGC
GCCGGCGACCGTGAGCGCGCCAGCCGCCGCGTGCCGGAACAACGCGGCCTGCGCGGAGGTGGCCGGCGAGGAGTGCGTGC
CGCCGCAGGGGCTGTTCGGCCTCGGCACCTTCTTCTCCAAGAAGGTGTACTGATCCCGACGAGCCACACCGCGC------
-----------CACTCGCTGAATGTACATAGGACTCGAGCCGGTACAGGCTCGTCTCTCTCGTCGATCCCTTGCACGACC
CCCTCCTCCGCCACCCGTTCGTTCGCTAGCTTAAGCATTCTTTTTCTCCTGCTTATCTCTGCACTGTACCACGCATCGCC
ATGAATGATAGCTCAGCTCAAGCTGCCGTCCCCTCCATCATGAACCGTCCAACTCAATGTCCATGTACCACTAGCCAG--
-----TAGTAAAACCGTAACACGCAA------------------------------------------------------
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>chr3A_1_TraesCS3A01G432400
TTTCAGAATAGAAAACGATTTTAGTTCAGACAAGAAGAATAATGTATCAGTAGGTGCATTGTACTACTAGCAACTAGGGC
AGCTATGCGTTTGAGCCTCGGCGAGGACATTGGCACGCAAGTTGACCATCGCTACCATCGAGCCA-----TCGAGGGCAG
TATATGCCGATGCATTTCCTTTTTTTT------ATAAGCACCCGCGGCGGCGCTCGGCTTGCTCGTGCCGATCTCATTAC
CGTTTCTCCCATGCTCGACCATCTCGCC---------------------------------------------AGGTCAA
CATGGACACACGCAAAACTAGCCTAGGGCACGGCGGTTATGTTATTGCAGTCG----------ATTGTTTCCACCGCCAG
CCCGTC-AGAAACTAAACTGGAAGGGAGTTTGACATTCGTCGCCAGGCCAACTCGTTTCCCCGGCGCACTCCTCGAGAGA
GACACTTGGGATGGTTTCAATCGTTCTTGAATTTTTCACTAGAGTAGCGTGCACCCTGGGTGGCGTCCGG----------
--CGTCCGCGGGGCACGCATTGCCCAGGCCACGCATTGAAGCACGCCGTGAGCTGCCTGC--------------------
-ACTGTGCTGCA------CGCACGTTAACTGATCCGGCACGGACGTCGCCATGACGCG----CCTGCGGTGCACGGACGG
CTCGCACTGTGGGCTTCATCACGGCCCGATTAATTTTCACCGGCGCAGCGTACGTGACTGACTGCCACCTCCGTGCGCCG
GGTGGTTT-ATTGCTCCACTGCCGCCGCAGCGGCGCTCCACGGCACG--------------GGCACGGGCACGAAGCAGT
TGTTTAACTGCGCAGTGAC-------------------------------------TTTCACCGTGCAGGCTCGATCGGT
AATTCCTGGGCGGGGC------------------------------GGGGGCGCGTCACCAGACAAAGATCGCAGAGCGC
ATATGCGGGCCTGCGGCACGCGAGGCGAGACGTGGAAAT---------------CAGCTCCCCACTTGATGTGATTGATG
ATAAATACGCGTGTCAAGTCGCTTCGTACGCCTCCCTTTCTCGTTCCGC------------CCCCATCCCCATTCCCATC
TCCTCGCTTCGCAAGCTGCGCCGAGTCCCTCCCACCCATGCTGTCCTGCACCTACTAGCTGAGCTCG--CTCGTGCTCCC
CGTCCGAGCCCAGGCCGCGTTCGTGG------------GGGGCTGGATTGCTCGGCGAGCGGGCGATGGACGTCGTCGTC
GGGCTGCCGTCGTCTCCGCCCGAGTCCGGGCGCTCCTCGCCGTCTCCGACCGCGTCGCCCGAGTTCGAGTTCTGGATGGT
GGGCAAGAACCCGGGGACATTCCCCTCCCCCGCCCTGCTCACCGCCGACGAGCTCTTCTCCGACGGCATTGTGCTCCCTC
TCCACACCCTCCAGGCCCCTCCTCCTTGCCCCGACGCCGGCCAAGAC---GACGGC---GAGGAAGACGCTGAGGAAGAT
GCCGACCCCAACGTCGACGTCAACGACTCCTCGGAGCCGCCGGAGGAGGAAGGGGAGCCTGCCGCGC------AGCCGCT
TGCGGAGGCCTGCGCCGTCCCGACGCTGGACCTCCCCGCGGTCACTTTCAAGTGGAAGGACATCTTCAAGGCCACCGGCG
AGTCCAAGGAGCGCGCCAAGAAGGCGGAGCGCC---------GCGTCAGCGGCAACGCCGAGCTCATCAACATCAACATA
TGGCCCTTCTCCCGGAGCCGCTCCGCTGGCCACTCTACCTCCGGCGCCGGCGCCGGCGCTAGCAGCAAGGCCAAGGCGAG
CACTCCCAGCACCGGCAACGCCAGTGCCGCTGCTGCCAGCGCACCGGTGGCGGCTACCGCGACGGCGGCGGGGCGCAAGG
TGAGCAGCGCGCCGTGCTCCCGGAGCAACTCCCGCGGCGAGGCCTCCGGGTCGGGGGTGCCGGCCGTCGCCATCGCGGCG
GCAGCGGAAAAGGCCGCTGCGCAAGCGCCCGCCACGTCCATGCTGAGGCGGTGGGTTCCCGGCGGTCAGGGCAGAGCAGG
CTTGAGCGCGAACGGCATCCGCCTGGGAAGAGCCAGCCCAGTCTGGCAGCTGAGGCGCAACAAGCTACAGCAGCAGCAGC
AAGCCGCCGCGGAGCAGAAGCAGAGCAGCAACGC------CACCGCCAGCGGCAAGAACAAGGCCGTCCCGGAAGACGAC
---GCGGCGACGAGCCAAGTCCAAGCGGACGCCGGCGAAGCAGCAGACAAGGCGACGGCGTCCGCTGCTGCAGACGCAGC
GCCGGCGACCGTGAGCGCGCCAGCCGCCGCGTGCCGGAACAACGCGGCCTGCGCGGAGGTGGCCGGCGAGGAGTGCGTGC
CGCCGCAGGGGCTGTTCGGCCTCGGCACCTTCTTCTCCAAGAAGGTGTACTGATCCCGACGAGCCACACCGCGC------
-----------CACTCGCTGAATGTACATAGGACTCGAGCCGGTACAGGCTCGTCTCTCTCGTCGATCCCTTGCACGACC
CCCTCCTCCGCCACCCGTTCGTTCGCTAGCTTAAGCATTCTTTTTCTCCTGCTTATCTCTGCACTGTACCACGCATCGCC
ATGAATGATAGCTCAGCTCAAGCTGCCGTCCCCTCCATCATGAACCGTCCAACTCAATGTCCATGTACCACTAGCCAG--
-----TAGTAAAACCGTAACACGCAAAAAAACACATCGATGTGGCGTGTAACACAGACTCCCGGGTCCCTTGCACGGCGA
GACATTGGTTTATGGGGGTTGGTTGAGTG------------------------------GGAGATGCCAAATGATTTGGG
GGCAAAAGGCTGGAAAAGTCAGGGAGGCCTCTGCGGCGCCTG----T----CCCGCCGTCCATGCACGCACCGGAGCCGG
ATCGACGATGGATGGATGGATGGATGGATCGGGGCGGATGGGCAT--------------GCACTGCTCTGGGCTGCATGC
CGCCACGGGCTACGCAACAAGGCGTACGCC--------------------------------------------------
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--------------------------------GTTGGACGCCTCTGCACATGCGCCTGCTGGCTTGCTAAATCTGCTGGG
ATCTTGTGTGGTAGCGGCCTGTATTATCGATGGCGATGCATCACACCACACCCCAGTCGACGGTTCAGGACTCCTCCATC
AGCCCCGTGCCCAC-------GCTGTGCTTGTTCTAGGCCGCGCATGACTCGTGGCCAT---------------------
---GGC----CATGCATGCAGACATGCGCTGCTGTCTGCACCATGATAGCAAGAAACAATTTG-----------------
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------------------------------CTCATGGGACCAATCTCGATAGATGGATGGATGGACAGAACCAGCAAAAC
GGTGG--------TAAAACTGGTCTGCTAGCGTGGTGCCGAGC------GGTGTAAAATTAAGTAGCCTGTGCAGATGGC
GGCGTTAAAGAAAGAGCCGATCTCTCCTCCTTAACTGTACAGCTACCGAAGCTAGCTAGTGGTGGCGAGCCGGTACTGCG
GTGAGGTTCATTGCTCCTGCGAGGGAAGTAGCCTCTTGCAGAAGGCAGAGGGACTAGCAAGTGGC-----------GGCG
GTGGTGGTGCTGGCGTAGTACTACTACTCCTCCAGATCAACCTTGCTTCGAGTTAAAGATCGGTGATGGTTGAGCCTTGA
GAGAGGTTAAAGCGCGCAGCATCTGGTGCTGCTGGTGTGGTGCTAATCGTAATCTAATCTCTCGACTCAGAGTGAGACAG
GCAGGCAGTGCTGATTAGTTGGTTGAGAAGAAAAGAAAAACGGCGAGGCAGTGGTACGGCTGCGTCG
>chr3D_51
--------------------------------------------------TAGGTGCATTGTAGCACTAGCAACTAGGGC
AGCTATGCGTTTGAGCCTCGGCGAGGACATGGGCACGCAAGTTGACTATAGCTA--------CCA-----TCGTGGACAG
TATATGCCGAGGCATTTCCCTTTTTTTATAAGCATAAGCATGCGCGGCGGCGCTCAGCCTGCTCGTGCCGATCAGATTAC
CGTTTCTCCTATGCTCGACCATCTCGCCCCGCTGGGCCCCAACGTGTTTGAACTTGTTCGACGCGACGTGGCCAGGTCAA
CATTGGCACACGCAAAACTAGCCTAGGTCG-GGCGGTTAAGTAATAAGTTATTCTAGTTGATTATTGTTTCCACCGCCAG
CCCGTCAAGAAACTAAACTGGAAGGGAGTTTGACATTCGTCACCAAGCCAACTC-GTTTGCCAGCGTACTCCTCGACAGA
GACA----------------TCATTCTTGAATTTTCACT---AGTAGTGTGCAACCTGCGAGGCAGGGCGGCCTCCTGGG
CCTGGCGCCGTC-------------------CGCATTGAAGCATGCCGTGAGCTGCCTGCGGCCAACTGCAGCCGCGCTG
CACCTGCACTGTGG----CGCACGTTAACTGACCCGGCACGGACGTCGCCTTGACGCGCCTGCCTGCGGTGCACGGAGGC
CTCGCACTGTGGGCTTCATCACGGCCCGATTAACTCTCACCGGCGCAACGTACGTGAACGACTGCCACCTCCGTGCGCCG
GGGCGTTT-ACTGC----------------------AGCCACAGCGCGGGACACGCGAGCAGGCACCGGCACGAAGCAGT
TGTTTAACTGCGCCGTGAC-------------------------------------TTTCACCGTGCAGGCTCGATCGGT
AATTCGCGGCGGGTGACGTGGAAGGAGAGCCGGGGCGGCGAGGGAGGGGGGCGCGTCACCAGACAAAGATCGCAGAGCGC
ATATGCGGCCCTGCGGCACGCGAGGCGAGACGTGGAAATCAGGGAGCCAGCAGCCAGCTCCCCACTTGATGTGATTGATG
ATAAATACGCGT--CAAGTCGCTTCATACGCCTCCCTTTCTCGTTCGATCCCCATCCCCATCCCCATCCCCATTCCCTTC
TCCTCGCTTCGCAAGCTGCGCCGAG----TCCCTCCCATGCCGTCCTGCAG---CTAGCTGAGCTAGCTCTCGTGCTTCC
CGTCCGAGCCCAGGTCGCGTTCGTGG------------GGGGCTGCATTGCTCGGCGAGCGAGCGATGGACGTCGTTGTA
GGGCTGCCGTCTTCTCCGCCCGACTCCGGCCGCTCCTCGCCGTCCCCGACCGCGTCGCCCGAGTTCGAGTTCTGGATGGT
GGGCAAGAACCCGGGCTCCTTCCCCTCCCCCGCCCTGCTCACCGCCGACGAGCTCTTCTCCGGCGGCATTGTGCTCCCGC
TCCACACCCTCCAGGCCCCTCCTGCCTGCCCCGACGCCGACCAAGACCAAGACGCC---GGGGAAGACGCTGAGGCCGAT
GCCGACGCCGACG---ACGTCAACGAGTCCGCCGAGCCGCCGGAGGAAGAAGGGGAGCCTGCCACGCAGGCGCAGCCGCT
CGCGGAGGCCTGCGCCGTCCCGACGCCGGACCTCCCCGCGGTCACCTTCAAGTGGAAGGACATCTTCAAGGCCACCGGCG
AGTCCAAGGAGCGCGCCAAGAAGGCGGAGCGCCGCGTCAGCAGCGTCAGCGGCAACGCCGAGCTCATCAACATCAACATA
TGGCCCTTCTCCCGGAGCCGCTCCGCTGGCCACTCTACCTCCGGCGCCGGCGCCGGCGCTAGCAGCAAGGCCAAGGCGAC
CAGTCCCAGCACCGGCAACGCCAGTGCAGCTGCGGCCAGCGCACCGGCGGCTCCTACCGCGACGGCGGCCGGGCGCAAGG
TGAGCAGCGCGCCGTGCTCCCGGAGCAACTCACGCGGCGAGGCCTCCGGGTCGGGGGTGCCGGCCGTCGCCATCGCGGCG
GCAGCTGAAAAGGCCGCTGCCCAAGCGCCCGCCACGTCCATGCTGAGGCGGTGGGTTCCCGGCGGCCAGGGCAGAGCAGG
CCTGAGCGCGAACGGCATCCGCCTGGGCAGGGCCAGCCCCGTCTGGCAGCTGAGGCGCAACAAGCTACAGC---AGCAGC
AAGCCGCCGCGGAGCAGAAGCAGAGCAGCAACGCCACCGCCACCGCCAGCGGCAAGAGCAAGGCCGTCCCCGAACAAGAC
GACGCCGCGACGAGCCAAGGCCAAGCGGACGGCGGCGAAGCAG---ACAAGGCGACGGCGTCCGCTGCTGCAGATGCAGC
GCCGGCGACCGTGAGCGCGCCAGCCGCCGCGTGCCGGAACAACGCGG---------AAGTCGCCGGCGAGGAGTGCGTGC
CGCCGCAGGGGCTGTTCGGCCTCCGCACCTTCTTCTCCAAGAAGGTGTACTGATCCCGAC-----ACACCGCGCCATGCG
TGGCCGTAGCGCACTCACTGAATGTACATAGGACTCGAGCTGGTACAGGCTCGTCTCTCTCGTCGATCCATTCCGCGACC
CCCTCCGCCGCC-------CGTTCGCTAGCTTAAGCATTCTTTTTCTC----TTATCTCTGTACTGTACTACGCATCGCC
ATGAATGATAGCTCAGCTCAAGCTGCCGTCCTCTCCATCATGAACCGTCCAACTCAATGTCCATGTACCACTAGCTAGCA
-GCACTAGTAAAACCGTAACACGCAAAAACC--CATCGATGTGGCGTGTAACACAAACTCCCGGGTCCCTTGCACGGCGA
GACATGGGTTAATGGGGGTTGGTTGAGTG------------------------------GGAGATGCCAAATGATTCGGG
GGCAAAAGGCTGGAAAAGTCAGGGTGGCCTCTGCGGCGCCTG----TCCCGCCCGCCGTCCATGCACGCACCGGAACCGG
ATCGACC-------GATGGATGGATCGATCGGGGCGGATGGGCAAGCAGCGGCAAGCACGCACTGCTCTGGGCTGCATGC
CGCCACGGGCTACGCAACAAGGCGTATGCC--------------------------------------------------
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--------------------------------GTTGGATGCCTCTGCACATGCGCCTGCTGGCTTGCTAAATCTGCTGGG
ATCTTGTGTGGTAGCGGCCTGTATTATCGATGTCGATGCGGCACAGCAC----------------------TCCTCCATC
GGCCCCGTGCCCAC-------GCCGTGCTTGTTCTAGGGCGCGCTTGCTCTGGCCACGAGTTGGCTCCTGGCTGTTGGGT
CCGGGCCATGCATGCATGCGGACATGCGCTGCTGTCTGCACCATGATGGCAAGAAACAATTTGCTCAGAGCATGGTTAAT
AGTATAGCTAGCTGCTGGCTATAAGCCAGTGCCATGTCATCTACAGTCCATTTTATAGCCAACATGTATAATAGTAGATT
AAAAGAGTGTACTATTTTTTTGTTATGTGGCCCATTTTTCATTCTCACAAAGTGTCTAGAGCACGTGCTAAAGCTGTCTC
TTCACAAAGAGCCCGCTTACCTTCTCTCTCCTCTTCTCTTTCCTCCAAGTAAGCAGAAATATACTAGTTTATTTCTTATA
GCCCGCTGACTCAGCTCTATTATACCTGCTCTCGTGGGACCAATCTCGCTAGATAGAT--------AGGACTAGACGGAC
CAATCTCGCTAGATAAAATTGTTCTGCTAGTGTGGTGCCGAGCCCGAGCGGTGTAAAATTAAGTAGCCTGTGCATCTGGC
GGGGTTGAAGAGTG----GATCTCTCCATCTTAACTGTACAGCTAACGAAGCTAG-------------------------
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>chr3B_51
--------------------------------------------------TAGGTACATTGTAGCACTAGCAACTAGGGC
AGCTATGCGCTTGAGCCTCGGCGAGGACATTGGCACGCAAGTTGACTATAGCTA--------CCATCGAGTCGAGGACAG
TATATGCCGACGCATTTCCTATTTTTTT-----ATAAGTATCCGCGGCGGCGCTCAGCTTGCTCGTGCCGATCACATTAC
CGTTTCTCCCGTGCTCGACCATCTCGCCCCGCTGGGCCCCAACGTGTTTGAACTTCTT-----CGACGTGGCCAGGTCAA
CATTG--ACACGCAAAACTAGCCTAGGGCCCGGCGGTTATTTAATTGGAGTTG----------ATTGATTCCACCGCCCG
CCCGTC-AAAAACTAAACTGGAAGGTAGTTTGACATTCGTCACCAAGCCAACTC-TTTCCCCAGCGTACTCCTCGATAGA
GACAATTGGGATGGTTTCATCATTCTTGA---TTTTTTTTTCACTAGTGTGCACCCTGCGAGGCAGGGCGGCCCCCTGGC
GCCGTCCGCGGGGCACGCATTGCCCAGGCCACGCATTGAAGCATGCCGTGAGCTGCCTGC--------------------
-ACCTGCACTGTGCCGGCCGCACGTTAACTGATCCGCCACGGACGTCGCCTTGACGC----GCCTGCGGTGCACGGAGGC
CTCGCACTGTGGACTACCACGCCGCGAC-TTAATTTTCACCGGCGCAACGTACGTGACTGACTGCCACCTCCGTGCACCG
GGTGGTTTTATTACTCCACTGCCGCCGCCCCAGCGCAGCAGCAGCGCGCCACACGCGACCACGCA-CGGCACGAAGCAGC
TGTTTAACTGCGCGGTGACAGCGCCGTCGCGCCTTCCCGCTTCGCTTTTGCTCCTGTTTCACCGTGCAGGCTCGATCGGT
AATTCCCGGCGAGTGAAGGTACATAGCCGGGGT----------------GGCGCGTCACCAGACAAAGATCGCAGAGCGC
ATATGCGGCTCTGCGGCACGCGAGGCGAGACGTGGAAATCAGGGAGCCAGCAGCCAGCT-CCCACTTGATGTGATTGATG
ATAAATACGCGT--CAAGTCGCTTCATACGCCTCCCTTTCTCGTTGGATCCCC------ATCCCCATCCCCATTCCCTTC
TCCTCGCTTCGCAAGCTGCTCCGAG----TCCCTCCCATGCCGTCCTGCAG---CTAGCTGAGCTAG--CTCGTGCTCCC
CGTCCGAGCCCAGGTACAGGTCGCGTCGTGCTGTTCGTGGGGCTGCATTGCTCGGCGAGCG----ATGGACGTCGTCGTC
GGGTTGCCGTCTTCTCCGCCCGAATCCGGGTGCTCCTCGCCGTCCCTGACCGCGTCGCCCGAGTTCGAGTTCTGGATGGT
GGGCAAGAACCCGGGCTCCTTCCCCTCCCCCGCCCTGCTCACCGCCGACGAGCTCTTCTCCGACGGCATTGTGCTCCCGC
TCCACACCCTCCAGGCCCCTCCTGCCTGCCCCGACGCCGAGCAAGACCAGGGTGAAGAAGGCGAGGACACTGAGGCCGAT
GCCGACCCCAACA---------------------AGCCGCCGGAGGAAGAAGGGGAGCCTGCCACGCAGGCGCAGCCGCT
CGCGGAGGCCTGCGCCGTCCCGACGCCGGACCTCCCCGCGGTCACCTTCAAGTGGAAGGACATCTTCAAGGCCACCGGCG
AGTCCAAGGAACGCGCCAAGAAGGCGGAGCGCCGCGTCAGCAGCGTCAGCGGCAACGCCGAGCTCATCAACATCAACATA
TGGCCCTTCTCCCGGAGCCGCTCCGCTGGCCACTCTACCTCCGGCGCCAGCGCCGGCGCTAGCAGCAAGGCCAAGGCGAC
CAGTCCCAGCACCGGCAACGCCAGTGCCGCTGTTCCCAGCGCACC---GGCGGCTCCAGCGACGGCGGCCGGGCGCAAGG
TTAGCAGTGCGCCGTGCTCCCGGAGCAACTCCCGCGGCGAGGCCTCCGGTTCGGGGGCGCCGGCCGTCGCCATTGCGGCG
GCAGCTGAAAAGGCCGCTGCCCAAGCGCCCGCCACGTCCATGCTGAGGCGGTGGGTTCCCGGCGGTCAGAGCAGAGCAGT
GCTCGGCACAAACGGCATCCGCCTGGGCAGGGCCAGCCCCGTCTGGCAACTGAGGCGCAACAAGCTACAGC---ATCAGC
AAGCCGCCGCGGAGCAGAAGCAGAGCAGCAA------------------------GAACAAGGCCGTCCCCGAAGG---C
GACGCCGCGACGAGCCAAGGCCAAGCGGACGCCGGTGA---AGCAGACAAGGCGACGGCGTCG---GCCGCAGATGCAGC
GCCGGCGACTGTGAGCGCGCCAGCCGCCGCGTGCCGGAACAACGCGGCCTGCGCGGAAGTCGCCGGCGAGGAGTGCGTCC
CGCCGCAGGGGCTGTTCGGCCTCCGCACCTTCTTCTCCAAGAAGGTGTACTGATCCCGAC-----ACACCGCGCCATGCG
TGGCCGTGGCCCCCTCACTGAATGTACATAGGACTCGAGCTGGTACAGGCTCGC----CTCGTCGATCCCTTCCACGACC
CCCTCCGCCGCC---CGTTCGTTCGCTAGCTTAAGCATTCTTTTCCTCTTACTTATCTCTGTACTGTACTACGCATCGCC
ATGAATGATAGCTCAGCTCAAGCTGCCGTCCTCTCAATCATGAACCGTCCAAGTCAATGGCCATGTACCACTAGTTAGTG
TGCACTAGTAAAACCGTAACACGCAAAAAAC--CATCGATGTGGCGTGCAACACAAACTCACCGGTCCCTTGCATGGCGA
GACATGGGTTAATGGGGTTGGTTGGCTGAGTGGGGAGGGTGATGGGGCCAGAGATTAGAGGAGATGCCAAATGATTTGGG
GGCAAAAGGCTGGAAAAGTCAGGGTGGCCTCTGCGGCGCCTGTCCCTCCCGCCCGCCGTCCATGCATGCACCGGAACCGG
ATCGACGATGGATCGATCGGGA------------------------------------------GCTCTGGGCTGCATGC
CGCCACGGGCTACGCAACATAAATAACACCATTCTTGTTTTGATTCCTAAGGTAAAATCCCCACAAGATATAACCCAATT
TAGACCCATATCATTATGCAATGTCTTGTACAAGATAGCCTCGAAGGTGTTGGCACTTCGTTTGCGCCCTGAGCTTGAGG
TAATTATTTCAGAAGAGCAAAGTGCTTTTGTTGCGGGACGGCTCATAACAGACAATGTCCTTACTGCCTACGAGTGTACA
CATTATCTGAAAAGGAAGAAAGGTAAAGCAGGAGCTTGTGCTGTTAAACTTGACATGGCTAAAGCATATGATCGAGTTGA
ATGGTCGTACTTGAGGGCGGTCATGGCCAAGCTTGGTTTCACGGATATTTGGATTAATCGAGTAATGTGCTGTGTGGAAA
CGGTGTCGTTTTCAGTCAGAGTAAATGGGGTGCTCTCGGAATTTTTTAAACCTTCCAAAGGTATTAGACAAGGGGACCCA
ATTTCGCCTTATCTTTTCCTTATTTGTTCAGAAGGTCTGTCTAGTATGCTCAAGAACTATGGGGCAGCACACCTTGGCAG
GGGAGTCCGGGTTGGGATACATGCTCCATGGATCTCACACTTATTGTTTGCGGATGATTGTGTGGTTTTTACGCAAGCCT
CGACTAATGGTGCAACCCGGTTACAACACATCTTGGAAAACTATAGAATCGGGTCCGGACAACTTGTCAATAGGCAGAAA
TCAGCGGTCTTTTTTAGTGCAAATTGCTCAGCTGAGGTGAAGCATGCATTCCATCAGGCCTCAGGAATTGAAACCGAAGC
GTTAGGAGAAAAGTACTTGAGTCTGCCAACTGCCCTTGAAGATGCACAGATGAGCAATTTGAGCACATACTTACAATTAT
TAAGAAGTTGATTAGGGGTTGGTCTCCAAAGCTCCTAAATAGCGCTGGGAGGGAAGTTTTAATCAAGGCAGTCCTTCAAG
CCATTCCAACCTATTCTATGAGTTGTTTCCGTCTCTCCAAAAATATGTGCAAAAAAAATCACAACTACCATTGCCAGGTT
TTGGTGGGGAGGAAATGAAAATACGAGCAAAATGCATTTGGAAGAAATGGAAGGATATTGCTGCTCCCAAATGTGTGGGT
GGTATGGGCTTTAAAGACCTTGAGTTGTTCAATCAAGCAATGCTTGCTAAACAGGGTTGGCGACTTCTCACACAACAGGA
TTCACTCTGTGCCAGGGTGATCAAAGGCAAGTATTTTCATGATGTTGATTTTATGACGGCAACAAGGAAAAAGAATGCCT
CGCATACATGGAGGGCAATTATGTATGGACGGGAAGCTCTAACTCATGGCCTGATCAAACGTATTGGTGATGGTAGCAAT
ACTAGAGTTTGGGAGGACCCCTGGATTCCTTCAAACTTGGGCTTTAAACCCCTTTTACGTCTTCAAAACTCGACCGTGAA
TATGGTCGAGGACTTGATCAACCCATACAATGGAGACTGGAATAGAGAGGTTTTACAGAATAATTTCCTTCCTATTGATG
CGGCTGCTGTGCAAATGATTCCTTTGGGAAGGATGGAAGAAGATAACTGGGCATGGCATTTAGAGAGAAGTGGAAATTTC
AGTGTCCGGTCAGCTTACAGGGCAATGCTTGGTGCTCGGCAGCAAACAAATAATCCAGCTAGCTCGGCAGGTGATGATAG
AACATTTTGGAAGAAGCTTTGGAAGATGCCTGTACCCCCAAACGTCCGTAATTTTTGGTGGCGTGTGATTAGGAAGTTTA
TCCCATGCCGATCTATTCTGAAGGAAAGACGTATTGAACAAATCAGTTTCTGCGAGGATTGTGGATGTGAAGAAACAATC
ACTCATTCTTTGTTCGATTGTACATGGGCTAAGCTGTTTTGGCATCAAATAAGGAACATGTTGGGTGTCAAACTTCCTCG
TTTGCATCCGGACTCATGGGCGATGGATATGATTGATGGAGGTATGGTCAGTGATACAGATGCCGATGTCATCTTATGTG
GATGTTGGTCTGTATGGTCAGAGCGCAATGCAAAGAAGCACGGAGATAAAGGGCGGTCGATCCAATGCTCGGTGAAATGG
ACTGCTGATGTGACTATGGATTTGATAATTTCATCAAAAGAAGGAAATAAAATGCCTACTAAGGCTGACGATAAATGGCG
ACCCCCGGAAATTAATTGCATTAAGCTGAATGTGGACGCAAGTTTTTTTTTGGCTGATTGTCTCCAAGGAAGTACAGGGG
TAGGTGTGCGCGATCATGAAGGTAAACTCGTTCGTGCCCAGGTACTATGGTATGAACATGCAGCCAATTCTTTTGTTATG
GAGGCGTTGGCTATTAGAGATGGAGTCCGACTTGCAGGTAATATGGGTCTCCGGAACATCATCGTTGAAACTGATGCTTT
GGCTATTACGAAGCTCTGGAATACCAATAATTTTGGGCGTTCAGAAATTGCTGTTGTGCTTCAGGAAACTAAAGAGCTTT
CAGAGAGTTTTCAGTTTTTTGTTTTGTCTTATGTTCCTAGAAAGGCTAATGAGCTTGCACATCTATGTGCAAGGCAAGCT
AATCCTCATAGAAAGCGTTGTGTCTGGATAAATTTTATTCCTAGATTTCTAGAGGCTTGTCTGTACAAGGANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGGATGCCTCTGCACATGCGCCTGCTGGCTTGCTAAATCTGTTGGG
ATCTTGTGTGGTAGCGGCCTGTATTATCGATGTCGATG-----CAGCAC----------------------TCCTCCGTC
GGCCCCGTGCCCACTGCCCACGCCGTGCTTGTTCTAGGCCGCGCTTGGTGTGGCCACGAGTTGGCTCTTGGCTGTTGGGT
CCGGGC----CATGCATGCAGACATGCGCTGCTGTCGGCACCATGATAGCAAGAAACAATTTG-----------------
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------------------------------CTCATGGGACCAATCTCGATAGATAGAT--------AGAATCAGCAAAGC
GGTAG--------TAAAACTGGTCTGCTGGTGTGGTGCCGAGC------GGTGTAAAATTAAGTAGCCTGTGCTGATGGC
GGCGTTAAAGAGTG----GATCTCTCCTCCTTAACTGTACAGCTAACGAAGCTAGTAGCAACGA----------------
------------------GCGAGGTTTGTAGCCTTTTGCAGAGGGCAGAGGGACTAGTTGCAAGTAGGGAGCAAGTGGTG
GTGATGGTGCTGGCGTAGTACTACTACTCC---AGATCAACCTTGCTTCGAATTAAAGATTGGTTGTGGTTGAC------
-AGAGGTTAAAGCGCGCAGCATCTAGT----CTGGTGTGGTGCTAATCGTAATCTAATCTCTCGATTCAGAGTGAGACAG
GCAGTACTGATTAGGTTGGTTCAA---AAGAAAAGAAAAATGGTGATGCAGTAGTACGGCTGCGT--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SS---------------
----------------------------------------------S--S----SSSSSSSS--------------S---
----------S-----------------------------S--------------S-----------------S------
--------------------------------------------------------------------------------
---S-S-----------------------S------------S----S---S----------------------------
-----------------------------------------S---S--------S-------S---S---------S---
----S--------------S--S-------------SSS-SS-----S----------S-S---SSSSS-----------
-------------------------------------------S------------------------------------
---SSSSSSSSS--------------------------------------S--------------------------S-S
-----------------------------------------------S--------------------------------
----------------------------SS-S----SS--SSSSSSS-------------------S-------------
-------------S------------------------------------------------------------------
------S--SS--S-S----------------------------------------------------------------
--------S-----------------------------------------------------------------------
------------SS-----------S--------------------SSS----------------------------S--
-------------------------SSSS----S-------S--------SSSS-----------S--------------
--------------S------------------------------S---------------S------------------
-----------S-----------S--------------------S-----------------------------------
---------------SS-S-----------------------------------------------------------S-
-----------------------S-S-------------S--------------S-----S--------------SS---
-------------SSS----------S---S-S--------------S---------------S----------------
S-------------------------S------------------S----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--S--------------------------------------------S---------------------S----------
--------------------------------------------------------------------------------
-----S--------------S-----------------------------------------------------------
-S-------------------------S--S--------S-------------------------------SSS------
----------------------------------------------------------------------S-----S---
-----S-------------S------------------------------------------------------S-----
---------------------------------------------------------S--S-------------------
-----------------------S------------------------------------SSSSS---------------
----------------S-----------------------S-------------------------------S-------
------S-----SSS---------------------------------S-S----------S-------S----------
-------------------------------S-------------------------------------------S----
------------------------------SSS----------------------S------------------------
-----S----S---------------------------------------------------------------------
------------------------S--------------------------------------------------S----
-------------S-----------S------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------S------SS----S---SSSSSSSSSSSSSSSSSSSSSS---------
S----------------------S--------------------S--SSSS-SSSS-SS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S---SSSSSSSS--------------
---S--------------------------S-------------------------------------------------
-----------SS-SSSS---------------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------SSS-------S-------S--------------SSSSSS-S-------------S-
---S--------------------------SSS------------------S--------S---SS-------SSSSSSS
S-----------------------S--SSSS----------------------------------S--------------
----SSSSSSS-SSS-S-S-SSSSSSS-------------S--S--S-----S------------SS
>forward_135
--------------------------------------------------------------------------------
-----------------------------------CGCAAGTTGACCATCGCTAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_1252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CTACTAGCTGAGCTCGCTCG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_971
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TCGATCGGT
AATTCCTGGGC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCGTTCGTTCGCTAGCTTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>forward_2542
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGGTGTACTGATCCCGACGA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_6546
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAACCAGCAAAAC
GGTGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
