>input_sequence_48824
--------------------------------------------------------------------------------
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-------------------------------------ATGGGCGATGAGGGGCTAGGTTACAACTTCCCGTGCTCCTTGT
TATCTA--------------------------------------------------------------------------
-------------------------------GCAGCAACAGGGGACGCTCGACAATTACATCTTTATCCATTGCTGGTTG
CGGTCTCCATTCCCTTGACAGGGTTGGCTGCTTGATAAGCTTGTGTGTAGTGCATCTGCACAGGATGCGTGTTACTGGAG
AGCAACTTATCTGCTTCCTGTCTACTTGTCCTAGTTTGCAGGATCTGCAACTTTCCTACTGCAATGACATGGTTTGCCTG
AAGATACCTCATTCCCTGTCGCGGCTCAAATTGCTACTGGTACGCAACTGCAACAGTTTGCAAACGATTGGATGCGATGC
TCCACAACTCAAGAGCTTTGGATATGATGGGTTGCCCACAACGCAGATCTGCCTTGGAGATTCATCACCCTTAGTGAGGG
AGATGAGAATGTCTGGTATGGATGATGAGCCTACAGGCATGCTCTGTTATGCCACCACTAAGCTTCCTTCAGTCGCACCA
AATATTAGCTCGCTTGTCTTATCATCATGCTTTGAGGTCAGTGCATGTTGGCTTCAGATTGTTACTGTACGCATGTTATG
CGGACATTTTTCACAGATA-------------------------------------------------------TATCAG
AATTATCTTTTGTCCCACTCCCCACACGCACACATCATCCCACCAAAGACATTGACTGCTTTCTTTGGCT----------
--------------ATCAACATTTTTTTACAGCTTCACAATGTTATTGTAGTTTTAGTGGGCTTTGTTACAACTATGTGA
AATCAGTATTGCC---TTTTTACCTGAGCATACGCATATATATAATAACCATATGCTAATAGTTGAGCATCTCTGTCGTT
TCTTCAGATTGCGACTCCAATGAAAAAGCTTAACAAATTCCGCCGCCTCAAGTACTTGGAGATACAGCTTCATACGCCAA
GACGTTGTCCAGACTTTGATTTTTATTCCCTGGTTTCTATTCTTAATGCTTGTCCTGTCCTGGCTACTTTCATCTTGCGT
GTAAGTC-AAATTTACCCCATATGAAAGCCTAAATTCAA---ATATGAGCT----TTTACTGTTGAATTATAGTATTTGT
ATACGTACCTTTAAT-TTTGTCTGTATGTGTAAGATCTTTTTCCATTTATTTAGTCAGCTGACTAATCAAAGACATGTAC
GTGATGCATATATTCATACATGCATGCAGTTAGAGATGCGCGATGCTGATGATGCCATTCCGGGAGATCCTGATGGTGAT
TCCTCACCACGAAAAACGCATATGAGGGGGCAGGGCCATCGCAAGTTGAAGAATGTGCTAATGAGGGGATTTCCTTCTGC
AAAAGGTTTGGTTGAGCTAACAAGTCACATCCTTGAGACCGCAGCATCCTTAAAGCGCCTGGTACTGGACACTGCATATG
GCTGCCATACGAGGGATTGCATTGGCATATGCTCGCCTTTAACGAGAAAGGCCCTCTTGGAAGCACAGAAAGCTGTAGAT
GTCATCAAGACATACATCGAGGGTAAAGTCCCCTCAAGTGTTAAATTCAGGCTTATCGAGCCATGTGCCAAGTGTCACGC
CGACGACGCATAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2D_1_TraesCS2D01G163400
AGCCCAAGTCCGATCCTGATTCTGCTCCTCAATTAGACTAACCAAC---CCGCCGCGCCATCATATATCATCATAT----
--CGGAACCGCCTCTTGGAGTCTGCTCAGCTTCGTCGTCTTGGATTGATTTTCTGATCGCCGGCTCGCGGCGGCGACTTG
TTAATTGATTCCTCGATCGGCTCCCTCTCCGGCCGGCCAGCTCTTTATTTTGT---------------------------
-----------------TAGTAAGATGGCTTCTTCATCATCAGGTACGGCGGCTGCTCGATCTCGATCTGTTGTCGTGCT
AATTTT-AATACCACCATAAATCATTCGTCAGAATAGGATGGTTTAGTAACTAA----TCTGCGTTTGTGTAAGTGGATT
GCATTGCAGCTCGCGGCGGACCGGCGCCTGCGCAACAAGAAGGAACGACGACGACGA---CGGTCAGCCTTCCAGAGG--
---TATGGTATGATCGATAAATCGCAGTTCAAAG---------------------GCAAATCATTATTCATCAGAATTAC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TACATTTATGTCTTGTTCTTACGTACGTACGTACTATACATATA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATGCAGGATATCCTTGGCCACATACACTCGTTGACGCCGATGCGA
GATGCTGCTCAGGCCGCCTGCGTATCCCATGCCTTTTTGCGTTTCTGGCGATCCTATGCCAGGCTCGACTTTAACATGTA
CACACTAGGATTACTGGATCCAGGCCGCCGCCTGCCGTCGATTGGTCCCATTGACGAAGAATTACCAGTTATAGAGGATC
AACTGAGGAGGGGCGTCATTGCAACATTCGACGAGTACTTCGAAAAGAATAGTGCTATCATAAAAGAATTCTCTGCCAGA
GTTGATCACATCATGCATAACCACGTCGGAACAGGTGTTCAGACATTCAGGCTTGTAAGTTAGTACAAAGTTGGGTCATC
TATTTTGAAACGGAGGGAGTACCTCCCTATGGCTTCTACATAAACCCTGCTGTTCTTGACCGCTGGTTCCAAGCTGTCAT
CGCACAGGGGATCAGTGAATTTGGCCTGTACCTAGACATGGGCGATGAGGGGCTAGGTTACAACTTCCCGTGCTCCTTGT
TATCTA--------------------------------------------------------------------------
-------------------------------GCAGCAACAGGGGACGCTCGACAATTACATCTTTATCCATTGCTGGTTG
CGGTCTCCATTCCCTTGACAGGGTTGGCTGCTTGATAAGCTTGTGTGTAGTGCATCTGCACAGGATGCGTGTTACTGGAG
AGCAACTTATCTGCTTCCTGTCTACTTGTCCTAGTTTGCAGGATCTGCAACTTTCCTACTGCAATGACATGGTTTGCCTG
AAGATACCTCATTCCCTGTCGCGGCTCAAATTGCTACTGGTACGCAACTGCAACAGTTTGCAAACGATTGGATGCGATGC
TCCACAACTCAAGAGCTTTGGATATGATGGGTTGCCCACAACGCAGATCTGCCTTGGAGATTCATCACCCTTAGTGAGGG
AGATGAGAATGTCTGGTATGGATGATGAGCCTACAGGCATGCTCTGTTATGCCACCACTAAGCTTCCTTCAGTCGCACCA
AATATTAGCTCGCTTGTCTTATCATCATGCTTTGAGGTCAGTGCATGTTGGCTTCAGATTGTTACTGTACGCATGTTATG
CGGACATTTTTCACAGATA-------------------------------------------------------TATCAG
AATTATCTTTTGTCCCACTCCCCACACGCACACATCATCCCACCAAAGACATTGACTGCTTTCTTTGGCT----------
--------------ATCAACATTTTTTTACAGCTTCACAATGTTATTGTAGTTTTAGTGGGCTTTGTTACAACTATGTGA
AATCAGTATTGCC---TTTTTACCTGAGCATACGCATATATATAATAACCATATGCTAATAGTTGAGCATCTCTGTCGTT
TCTTCAGATTGCGACTCCAATGAAAAAGCTTAACAAATTCCGCCGCCTCAAGTACTTGGAGATACAGCTTCATACGCCAA
GACGTTGTCCAGACTTTGATTTTTATTCCCTGGTTTCTATTCTTAATGCTTGTCCTGTCCTGGCTACTTTCATCTTGCGT
GTAAGTC-AAATTTACCCCATATGAAAGCCTAAATTCAA---ATATGAGCT----TTTACTGTTGAATTATAGTATTTGT
ATACGTACCTTTAAT-TTTGTCTGTATGTGTAAGATCTTTTTCCATTTATTTAGTCAGCTGACTAATCAAAGACATGTAC
GTGATGCATATATTCATACATGCATGCAGTTAGAGATGCGCGATGCTGATGATGCCATTCCGGGAGATCCTGATGGTGAT
TCCTCACCACGAAAAACGCATATGAGGGGGCAGGGCCATCGCAAGTTGAAGAATGTGCTAATGAGGGGATTTCCTTCTGC
AAAAGGTTTGGTTGAGCTAACAAGTCACATCCTTGAGACCGCAGCATCCTTAAAGCGCCTGGTACTGGACACTGCATATG
GCTGCCATACGAGGGATTGCATTGGCATATGCTCGCCTTTAACGAGAAAGGCCCTCTTGGAAGCACAGAAAGCTGTAGAT
GTCATCAAGACATACATCGAGGGTAAAGTCCCCTCAAGTGTTAAATTCAGGCTTATCGAGCCATGTGCCAAGTGTCACGC
CGACGACGCATAACCTGCTTGTACGTTAGACCTCCTCCAATAGTTGCATAAGAGCTAGTTCAAATAATCTTTTTTTTATT
TTAATAGAAGAAGAGAGAAAAGAACTATCTTTCGATTAAGAGATAGCCTTATGCACACACATTAAGATTATATATATGAA
GATGACGTGTGGGTGGGGTCATTCATATTATAAGATATGTGCTAAAAGATACTCCCTCCGTTCCGAATTACTTGTCGCAG
GTATGGATGTATCTAGATGTATTTTAGTTCTAGATATATCCATTTCTACGACGAGTAATTTGGAACGGAGGGAGTAGATC
ATTTAAATAATTGTGTTTTAGACTGTTTAGAGCTAGGTACTGGCACATACCATTGGAGGAGGCCTT-AAAAACTTTTTTA
TTGTAATACCTTAATAAAAAAGCATCAATGGCACCTCCTAGCCAGCTTTTCTACTTAACTCTAATCCTCCTTATGTAAGT
CGAGTTTAGTTTTAGTTTTGTTGTGCTAATTAATAAATATCTAGTACAATGCCCGTGCGTTACCACGGGCTCTTAAAATA
GGTTGCAAGAGTTACATATTAAATTCCACACGTACAAACAATATAGCACAGACACAATTATTTAATAATTGAAGTCCATT
TTTTGCAATGTAAATTGATATCATAAAGAAAAATTAACGACATGTCCATGTAACAAACTGAGCGATGTTCCAACTAAACA
TCTATTACAAAACTATTAATATCTAGATGATGCGCTTAAGAAATTCTTTCACAATATTAGGAAAGTTTCCTTTAGCTTCA
TTCCCATGATGTTTTAGCAAGTATAATAAAAAC-TGCTTCCTCAACTCATACCCATCCTGCACAAACAATACATGTAGTT
AGTATGAAAATTTCACGCCGAAGGTCTTAAAACATGTAACGGACAATACTCACCGCGCAAACCGGCTTGACCAATTCTTT
ACCGTTCCACCAGAGCATAAAATGAGAAACAAAATAGCCAGACACATTCCTGCAG
>chr2B_1
AGCCCAAGTCCGATCCTGATTCTGCTCCTCAATTAGACTAATCAAC---CCGCCGCGGCATCATATATCATCATATATGT
ATCGGAACCGCCTCTTCGAGTCTGCTCAGCTTCGTCGTCTTGGATTGATTTTCTGATCGCCGGCTCGCGGCGGCGACTTG
TTAGTTGATTCGTCGATCGCCTCCCTCTCCGGCCGGCCAGTTCTTTATTTTATATA---------TACAGATCTAGTAAA
TAG-----ATCGGATAATAGTAAGATGGCTTCTTCATCATCAGGTACGGCGGCTGCTCGACCTCGATCTGTTGTCGCGCT
AATTTTTAATACCATCATAAATCATTCGTCAGAATAGGTTGGTTTAG----TAA----TTTGTGTTTGTGTTAGTGGATT
GCATTGCAGCTCGCGGCGGATCGGCGCCTGCGCAACACGGAGGA---ACGACGACGA---CGGTCAGCCTTCCAGAGG--
---TATG-----ATCGATAAAACGCAGTTCAAAGGGTTGGATCGCATGCAAACTTGCAAATTATTATTCATCAGAATTAC
ATACTTCCTCTGTTCCATAATGTAGTGCCTATAGATTTTTACAAAAGTCAAACATTACAAACTTTGATCATGTATATAGA
GAAAAGTAGGTACATCTAGAATACCAAATGCACATCATTGGATACATCATAAGTTATATTTTCATAATTTACATGTTTGA
TATTGTAGATGTAGACAGATTTCTCTATACACTTGGTCAAAGTTGGCAAAGTTTGACTTTCACAAAAATCTATAGGCACT
ACATTGTGGAATGGAGGGAGTACATTTATGTCTTGTTCTTACGTACGTACTGTAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TATATATGCAGGATATC----------TACACTCGCTGATGCCGTTGCGA
GATGCTGCTCAGGCTGCCTGCGTATCCCATGCCTTTTTGCGTTTCTGGCGATCCTATGGCAGGCTCGACTTTGACATTTA
CACACTAGGATTACTGGATGTAGGCCGCCGCCTGTTGTCGTTTGGTCCCATTGACAAAGAATTACCAGTTATAGAGGATC
AACTGAGGAGGGGCGTCATTGCAACATTCGACGAGTACTTCGAAAAGAATAGTCCTATCATAAAAGAATTCTCTGCCAGA
GTTGATCACATCATGCATAACCACGTCGGAACAGGTGTTCAGACATTCAGGCTT--------------------------
------------------GTACCTCCCCATGGCTTCTACATAAACCCTGCTGTTCTTGACCGCTGGTTCCAAGCTGTCAT
CGCACAGGGGATCAGTGAATTTTACCTGTACCTAGACATGGGCGATGAGGGGCTAGGTTACAACTTCCCGTGCTCCTTGT
TATCTACTCCCTCCGTTCGGAATTACTTGTCTCAGAAATGGATGCATCTAGAACTAAAATACGTCTAGATACATCCATTT
CTGCGACAAGTAATTCCGAACGGAGGGAGTAGCAGCAACAGGGGATGCTCGACGATTACATCTTTCTCCATTGCTGGTTG
CGGTCTCCATTCCCTGGACAGGGTTGGCTGCTTGATAAGCTTGTGTGTAGTGCATCTGCACAGGATGCGTGTTACTGGGG
AGGAACTTATCTGCTTCCTGTCTACTTCTCCTCGTTTGCAGAAGCTGCAACTTTCCTACTGCAATGACATGGTTTGCCTG
AAGATACCTCATTCCCTGTCGCGGCTCAAATTGCTGCTGGTACGCAACTGCAACAGTTTGCAAACGATTGGATGCGATGC
TCCACAGCTCAAGAGCTTTGGATATGATGGGTTGCCCACAACGCAGATCTGCCTTGGAGATTCATCACCCTTAGTGAGGG
AGATGAGAATGTCTGGTATAGATGATGAGCCTACAGGCATGCTCTGTTATGCCACCACTAAGCTTCCTTCAGTCGCGCCA
AATATTAGCTCGCTTGTCCTATCATCATGCTTTGAGGTCAGTGCATGTTGGCTTCAGATTGTTACTGTACG---------
--GTCATTTTTCACAGATA-------------------------------------------------------TATCAG
AATTATCTTTTGTCCCACTCCCCACACGCACACATCATCCCACCAAAGACATTGACAGCTTTCTTTGGCT----------
--------------ATCAACATTTTTTTACAGCTTCACAATGTTATTGTAGTTTTGGTGGGCTTTGTTACAAATATGTGA
AATCAGTATTGCCATTTTTTTACCTGAGCATACGCATATATATAATAACCATATGCTAATAGTTGAGCATCTCTGTTGTT
TCTTCAGATTGCAACTCCAATGAAAAAGCTTAACAAATTCCGCCGCCTCAAGTACTTGGAGATACAGCTTCATACGCCAA
GACGTTGTCCAGACTTTGATTTTTATTCGCTGGTTTCTATTCTTAATGCTTGTCCTGTCCTGGCTACTTTCATCTTGCGT
GTAAGTC-AAATTTTCCCCATATGAAAGCCTAAATTCAAGAAATATGAGCT----TTTACTGTTGAATTATAGTATTTGT
ATACGTACCTTTAATTTTTGTCTGTATATGTAAGATCTTTTCCCGTTTATTTAGTCAGCTGACTAATCAAAGACATGTAC
GTGATGCATATATTCATACATGCATGCAGTTAGAGATGCGCGATGCTGATGATGCCATTCCGGGAGATCCTCATGGTGAT
TCCTCGCAACGAAAAACGCATATGAGGGGGCAGGGCCGTCGCAAGTTGAAGAATGTGCTAACGAGGGGATTTCCTTGTGC
AAAAGGTTTGGTTGAGCTAACAAGTCACATCCTTGAGACCGCAGCATCCTTAAAGCGCCTGGTACTAGACACTAAATATG
GCTGCCATACGAGGGATTGCATTGGCATATGCTCGCCTTTAACGAGAAAGGCCCTCTTGGAAGCACGGAAAGCTGTAGAT
GTCATCAAGACATACATCGAGAGTAAAGTCCCCTCAAGTGTTAAATTCAAGCTTATCGAGCCATGTGCCAAGTGTCACGC
CGATGACGCATAACCTGCTTGTTAATTAGACCTCCTCCAATAGTTGCATAAGAGCTGGTTCAATTTTA-TTTTTTATATT
TTGAT---AGAAGAGAGAAAAGAACTATCTTTCGATTAAGAGATAGCCTTATGCACACACTTTAAGAT----TATATGAA
GATGACGTGTGGGTGGGGTCATTCATATTATAAGATATGTGCTAAAAGATACTCCCTCCGTCCTATAATGTAGGATGTTT
TGTGACACTACACTAGAGTCAAAAAACTTCCATTATGAG-------------------------ACGGAGGGAGTAGATC
ATTTAAAGAATTGTGTTTTAGATTGTTTAGAGCTTGGTACTGGCACATACCATTGGAGGAGGCCTTAAAAACTTTTTTTA
TTGCAATACCTTAATTAAAAAGCATCAATGGCACCTCCTAGCCAGCTTTTCTACTT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2A_1
AGCCCAAGTCCGATCCTGATTCTGCTCCTCAATTAGACTAACCAACCCGCCGCCGCGGCATCATATATCATCATATATGT
ATCGGAACCGCCTCTTGGAGTCTGCTCAGCTTCGTCGTCTTGGATTGATTTTCTGACCGCCTGCTCGCGGCGGCGACTTG
TTAGTTGATTCGTCGATCGGCTCCCTCTCCGGCCGGCCAGCTCATTATTTTATATACTAATACTATACAGATCTACTCCA
GTAGATAAATCGAATAATAGTAAGATGGCTTCTTCATCATTAGGTACGGCGGCTGCTCGATCTCGATCTCTTGTCGCGCT
AATTTT-AACACCATCATAAATCATTCGTCAGAATAGGATGGTTTAG----TAATTAATTTGCGTTTGTGTTAGTGGATT
GCATTGCAGCTCGCGGCGGATCGGCGCCTGCGCAACAAGAAGGA---ACGACGACGGCGGCGGTCAGCCTTCCAGAGGCA
TGGTATG-----ATCGATAAATCGCAGTTCAAAGGCAAATT------------------ATTATTATTCATCAGAATTAC
ATACAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTATGTCTTGTTC-----TACGTACGTACTATACATACTAGATGATTTTCCCCGC
GCGTTGCTGCGGGATTTTAAAGATCAATTTTGAATATGTTCTATATGCATGAATAAAATGATCTAAATCAGAAGCTATTA
TTTTCGAAAGTAATTACATGTGAACAAAGAGTATGCATGTACGTTGGACTATTGAAGATGTAACAATTAAATTGGGGTAT
GCATGTGCTACCAAATAGTTTTAGTGGATGATGATATGACATTTTTGGTGATGTGGAGGGCTGCATGTTAAGAAAATTAG
ACTTAGTGAGGATCAACTATTTATGCATTATAAATATGCAGGATATCCTTGGGCACATACACTCGTTGATGCCGATGCGA
GATGCTGCTCAGGCTGCCTGCGTATCCCATGCCTTTCTGCGTTTCTGGCGATCCTATCCCAGGCTCGACTTTGACATGTA
CACACTAGGATTACTGGATGTAGGCCGCCGCCTGCTGTCGTTTGGTCCCATTGACAAAGAATTACCAGTTATAGAGGATC
AACTGAGGAGGGGCGTCATTGCAACATTCGACGAGTACTACGAAAAGAATAGTCCTATCATAAAAGAATTCTCTGCCAGA
GTTGATCACATCATGCATAACCACGTCGGAACAGGTGTTCAGACATTCAGGCTT--------------------------
------------------GTGCCTCCCTATGGCTTCTACATAAACCCTGCTGTTCTTGACCGCTGGTTCCAAGCTGTCAT
TGCACCGGGGATCAGTGAATTTGGCCTGTACCTAGACATGGGCGATGAGGGGCTAGGTTACAACTTCCCGTGCTCCTTGT
TATCTA--------------------------------------------------------------------------
-------------------------------GCAGCAACAGGGGATGCTCGACGATTGCATCTTTCTCCATTGCTGGTTG
CGGTCTCCATTCCCTGGACAGGGTTGGCTGCTTGATAAGCTTGTGTGTAGTGCATCTGCACAGGATGCGTGTTACTGGAG
AGCAACTTATCTGCTTCCTGTCTGCTTCTCCTGGTTTGCAGCAGCTGCAACTTTCCTACTGCAATGACGTGGTTTGCCTG
AAGATACCTCATTCCCTGTGGCGGCTCAAATTGCTGCTGGTACGCAACTGCAACAGTTTGCAAACGATTGGATGCGATGC
TCCACAGCTCAAGAGCTTTGGATATGATGAGTTGCCCACAACGCAGATCTGCCTTGGAGATTCATCACCCTTAGTGAGGG
AGATGAGAATGTCTGGTATGGATGATGAGCCTACAGGCATGCTCTGTTATGCCACCACTAAGCTTCCTTCAGTCGCGCCA
AATATTAGCTCGCTTGTCCTATCATCATGCTTTGAGGTCACTGCATGTTGGCTTCAGATTGTTACTGTACGCATGTTATG
CGGTCATTTTTCACAGATACTCCCTCTGTCCCATAGCTTGAAAAACGTTCCTATATTATGGGACGAAGGGAGTATATCAT
AATTATCTTTTACCACACCCCCCACACGTACACACCATCCCACCAATGACATTGACAGCTTTGGCTATCAACATTTTTTG
CGAGGAAGAATCTAATCAACATTTTTTTACAGCTTCACAATATTATTGTAGTTTTAGTGGGCTTTATTACAAATATGTGA
AATCAGTATTGCC---TTTTTACCTGAGCATACGCA----TATAATAACCATATGCTAATAGTTGAGCATCTCTGTTGTT
TCTTCAGATTGCAACTCCAATGAAAAAGCTTAACAAATTCCGCCGCCTCAAGTACTTGGAGATACAGCTTCATACGCCAA
GACGTTGTCCAGACTTTGATTTTTATTCCCTGGTTTCTATTCTTAATGCTTGTCCTGTCCTGGCTACTTTCATCTTGCGT
GTAAGTCAAAATTTTCCCCATATGAAAGCCTAAATTCAA---ATATGAGCTTTTATTTACTGTTGAATTATAGTATTTGT
ATACGTACCTTTAAT-TTTGTCTGTATATGTAAGATTTTTTCCCATTTATTTAGTCAGCTGACTAACCAAAGACATGTAC
GTGATGCATATATTCATACATGCATGCAGTTAGAGATGCGCGATGCTGATGATGCCATTCCGGGAGATCCTCATGGTGAT
TCCTCACAACGGAAAACGCATATGAGGGGGCAGGGCCATGGCAAGTTGAAGAATGTTCTAGTGAGGGGTTTTCCCTCTGC
AAAAGGTTTGGTTGAGCTAACAAGTCACATCCTTGAGACCGCAGCATCCTTGAAGCGCCTGGTACTGGAAACTGCATATG
GCTGCCATACGAGGGATTGCATTGGCATATGCTCGCCTTTAACGAGAAAGGCCCTCTTGGAAGCACGGAAAGCTGTAGGT
GTCATCAAGACATACGTCGAGGGTAAAGTCCCCTCAACTGTTAAATTCAAGCTTATCGAGCCATGTGCCAAGTGTCACGC
CGACCACGCATAACCTGCTTG----TTAGACCTCCTCCAATAGTTGCATAAGAGCTAGTTCAAATAAT-TTTTTTATATT
TTAATAGAAGAAGAGAGAAAAGAACTATCTTTCGATTAAGAGATAGCCTTATGCACACACTTTAAGAT----TATATGAA
GATGACGTGTGGG----GTCATTCATATTATAAGATATGTGCTAAAAGATATATCAT-----------------------
--------------------------------------------------------------------------------
----------TTGTGTTTTAGACTGTTTAGAGCTAGGTACTGGCACATACCATTGGAGGAGGCCTTAA----TTTTTTTA
TCGTAATATCTTAATTAAGAAGCCTCAATGGCACCTCCTAGCCAGCTTTTCTACTTTCCTTTAATCCTCCCTATGTAAGT
CGAGTTTAGTTTTAGTTTTGTTGTGCTAATTAATAAATA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr5A_3025
--------------------------------------------------------------------------------
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------------------TGTAGTGCCATTTTATGAAATACTAGTAGAGTGCCCGTGCGTTGCCATGGGCTCTTGAAATA
GTTTACCAGAGTTAAATGTTAAATTCCACACATACAAACAATATAACACAAACACAATTATTTAATAACTGAAGTCCATT
G-TTGCAATGTAATTTGATAACATAAAGAAAAATTAACGACATGTCCATGTAACAAACTGAGCGATGTTCCAACTAAACA
TCTATTACAAAACTATTAATATCTAGATGATGCGCTTAAGAAATTCTTTCACAATATCAGGAAAGTTTCATCTAGCTTCA
TTCCCATGATGTTTTAGCAAGTATAATAAAAAAATGCTTCCTTAATTCATACCCATCCTGCACAAACAATACATGTAGTT
AGTATGAAAAATTCATGCCGAAGGTCTTAAAACATGTAACGCACAATACTCACCGCGCAAACCGGCTTGACCAATTCTTT
ACCGTTCCACCAGAGCATAAAATGAAAAACAAAATAGCCAGACACATTC------
>chr1D_3039
ATATAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------ATACTAGTAGAGTGCCCGTGCGTTGCCACGGGCTCTTGAAATA
GTTTACAAGAGTTACATGTTAAATTCCACACGTACAAACAATAAAACACAAATACAATTATTTAATAACTGAAGTTCATT
-TTTGCAATGTAAATTGATAACATGAAGAAAAATTAACGACGTGTCCATGTAACAAACCGAGCGATGTTCCAACTAAACA
TCTATTACAAAACTATTAATATCTAGATGATGCGCTTAAGTAATTCTTTCACAATATCAGGAAAGTTTCCTTTAGCTTCA
TTCCCACGATGTTTTAGCAAGTGTAATAAAAAC-TGCTTCCTCAATTCATACCCATCCTGCACAAACAATACATGTAGTT
ATTATGAAAATTTCACGCCGAAGGTCTTAAAACATGTAACTGACAATACTCACCATGCAAATCGGCTTGACCAATTCTTT
ACCGTTCCACCAGAGCATAAAATGAAAAACAAAATGGCCAGACACATTCCTGCA-
>SNPs
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
---S-------S---------------------------------------S----------------------------
----------------------------------------------------------------------------S---
--------------S--------------------------------SSSS--------S-----------S--------
--------------------S-----------------------SSS---------------------------------
-------SSSSS-------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S----------------S----------
--------------S---------------------------------------------------------S-------
-------------------SS--------------S----S--------------S------------------------
-----------------------------------------------------S--------------------------
------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-------S-----------S--------------
---------------S----------------------------------------------------------------
---------------------------S----S--------S-S------------------------------------
-----------------------------------S--------------------------------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------S-------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------------------------S-------
----------------------------------------------------------------------------S---
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------S-------------S--------------------------------------
-----------------------------------------------------------------------S--------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-------------------------------------------------S------------------------------
----------------------SSS-------------------------------------------S------S----
------------------------------------------------------------S-------SSSS--------
-------------------------------------------------------------S-SSS-S-SSSS-SS-SSS
SSSSSS-SSSSS-----SSS-SSSS-S---S-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSS----------------
-------S---------------------------------------------------------------SS-------
---------------S----------------------------------------SS--S---------S---------
---------------------------------------S------S-S------------S------------S-----
-S--S------------S---------------------------S----S-----------------S-----------
S-------------------S-----------------------------------------------------------
---------------------------------------------------------S----------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------S
>forward_446
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CCTGCGCAACAAGAAGGAAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2036
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ACTGGTACGCAACTGCAACA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_1856
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTTG
CGGTCTCCATTCCCTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_3880
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TCTAGTACAATGCCCGTGCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
