>input_sequence_48816
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--------------------TGCCCATTGCTCCATCAATGGCAGCTCCGGCTCTCAGCTTGATTTTGTGTATGCTCCTGC
TCTCGCACGGCTCGGCGCAGGCCAGGAAGACGGTGCCCGGCGAGGTGGTGGCCGTGGCAGATCGGGATGGAGCGTCGGGC
AGGGAGAGGTTCTTGGGTGGTGTTGTTGACGGAGCCGCGGGTGGCTCCCGGCGCCGGCGGGAGCTCCTTGCGGGAGCGGG
GGCGACGACGACGCGTGACGTGTTCGCGCCGGTGACCAACCCGGTGACGGTGCCGGCGACCAACCCGGCGTCCCCGGGCG
GCATCGTCACCGTGCCGGCGACCAACCCGGGCACGGGCACCGGGTTCCCCATCAACCCCAACCTCCCGCCGCTGTACCCG
GAGCCGTCGGCCACGCCCGACCCAACGACGATGCCGGCGCCGTTCACGAACCCGGTCGCCGCGCCGACCATGCCGGCGCC
GTTCACCGGCCCGGTCACCAACCCGGCCACGACGCCGACGCCGGTGCCCGGCACGTCGCCAATCACCAACCCGGCCACGA
CGTACCCGGGCGGGGCTGCCGGTGGCGGCGTCGCCGTCGGGAGCGTGCCGACGACCCCGGTGTACCAGGCGCCGGCGACG
ACGGTGCCGACGCCGACCACGGTGCAGCCGGCGGCGGGGGCCGGGACAGGGCAGTCCACGTGGTGCGTGGCCAAGGCGGG
GGTGACGGAGGCGGCGCTGCAGGACGGGCTGGACTACGCGTGCGGCATGGGCGGCGCCGACTGCTCGGCGCTGCAGCCCA
TGGGCAGCTGCTACAACCCCAACACGATCCAGGCGCATGCCTCCTACGCCTTCAACGCCTACTACCAGCGCAGCCCCTCG
CCGGCCAGCTGCGACTTCGGCGGCGCCGGCATGCTCGTCGCCACCAACCCAAGTAACCAAACCCTCACTCC------ATC
ACTTGATCTTCTTCAGCTAACTCTGAAACTGTTAGCAACGCCCTTTGATTATCACTGACGAGCTGCTGAATTATTCAGGT
TCAGGAGCTTGCATGTACCAGACATCAGCAGGTTCAGGGTAA-------------------------GTCTCTAGAACAC
ATGATCTTGTCAGGAATTTCAAATCAAACAGTCAAATTCTTACACC--------TCTTCTGCTAAGCTGATCATGCAACT
GTGACATGTGCAGTTCTGCCGCCGGCTACAGCCCGGCGGCGACAGGCACCACCTTCGGGCCGGTGGGCGTGACGCCGAGC
TTCGGGCCAGTGGGCACCAC------GACGGGGACAGGACCGGCGGTCAGCAGTGGAGGGTCGGGCTCGACGGTGCTGAA
TGCGAACAACTACCCCGGCGGGACCTCGATGTACGGCCCGGGCAACCCGGCGGGCTTCTCCGACACCAGCAGCGGCGCCG
C---CCTTAACTGCAGCTGGGTTCTGTCTCTGATCTGGATGTTCACCTTTGCTTATGTCAAGGTGAAGGTGTAGCATCCA
TGTGCTGCTGCTGCTGCTGCTGATGTGTTCTTCTCTTGTTGACATGATATTCACTTGTGTACAGAGATGGATAAATGAAT
TCATAGGGG-----------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G513000
TGCACACACACAAACACGCATGCTGACACAAAGTGATTCCAGAGAGCAATGGTGCAAATTAAGCAAGAATCCACTCCTTG
AGGTC----CTGGTGCATGCACATGGCATGAGCAACCAAGAGCAGCCTTTTTGGAGCCCATCTGCTATGCCCCATCTGGT
CCAAACACTGGAATTTCTTCTTCTTCACAGCCAAGTCCACCACCACCAGAACAGCCAGTGTACCAAGTCTCTGTCCATTT
GGATTGGATTGAGAATGAGTGACACGGACACACAGTGATCATCAGTGCAAGACTACTAGATCAGGACCATTTTTGTGTGT
GAGAGACAGTCACCAAAGAGAGAAAGCACCTTTGTCGTCGATTGGACCTGAAAACCTATGGCGAGAGCAAAGCATTATCT
CCTTTTGTGTGACTGTCTGCTGACAAGAACAGCAAGCAAATGACTGTCGCTTGCCAGTGTGTGTGCAGTTACATCACACT
CTCACCACCTTCTACATGTATGTTTTTCTCCTGATGAAAATAGGGA-----------------TGCCATTGCCACCCCTG
TCTGAGTCAGCATTCTCATGCACACAT---------T------TTTCTTTTCGACGTATTTCGT---CGAATTGTCGGCA
CAAACTCTTTTGTGCATCTTCTGCGACTGAAAGGAGACTGATCAAAGTGACAAGATAACATTGAAATTTTCACTTTCATG
TTATTCAGCACCAGGTACATC---------TTTCTTCTTTCTCTCGACAGTAGGGGATGTGTACAAGTATTTGAAAATTC
GAACGCTGTTCCAAAGTAGAAAGAGAAAAGGAGCATCATGCATTGCGTTGCATTTTCAAATTGCAACTATTATAATCAGA
AACGAATTACGGTCCGCTTTGCCGCCTT-TTTTTTCTCCCCTATTGCTCGTGCTTTT-CCGCTTTGTATCACGCACCTCC
AGCCTTTAAATTTCGCCTTTGGTGAACAAGCTCCTTTCTCCTCGCATTTCCAGCTCCGTTTCCTCCATAGCCTAGTCAGC
AAGCAA----------CCATTGCCCATTGCTCCATCAATGGCAGCTCCGGCTCTCAGCTTGATTTTGTGTATGCTCCTGC
TCTCGCACGGCTCGGCGCAGGCCAGGAAGACGGTGCCCGGCGAGGTGGTGGCCGTGGCAGATCGGGATGGAGCGTCGGGC
AGGGAGAGGTTCTTGGGTGGTGTTGTTGACGGAGCCGCGGGTGGCTCCCGGCGCCGGCGGGAGCTCCTTGCGGGAGCGGG
GGCGACGACGACGCGTGACGTGTTCGCGCCGGTGACCAACCCGGTGACGGTGCCGGCGACCAACCCGGCGTCCCCGGGCG
GCATCGTCACCGTGCCGGCGACCAACCCGGGCACGGGCACCGGGTTCCCCATCAACCCCAACCTCCCGCCGCTGTACCCG
GAGCCGTCGGCCACGCCCGACCCAACGACGATGCCGGCGCCGTTCACGAACCCGGTCGCCGCGCCGACCATGCCGGCGCC
GTTCACCGGCCCGGTCACCAACCCGGCCACGACGCCGACGCCGGTGCCCGGCACGTCGCCAATCACCAACCCGGCCACGA
CGTACCCGGGCGGGGCTGCCGGTGGCGGCGTCGCCGTCGGGAGCGTGCCGACGACCCCGGTGTACCAGGCGCCGGCGACG
ACGGTGCCGACGCCGACCACGGTGCAGCCGGCGGCGGGGGCCGGGACAGGGCAGTCCACGTGGTGCGTGGCCAAGGCGGG
GGTGACGGAGGCGGCGCTGCAGGACGGGCTGGACTACGCGTGCGGCATGGGCGGCGCCGACTGCTCGGCGCTGCAGCCCA
TGGGCAGCTGCTACAACCCCAACACGATCCAGGCGCATGCCTCCTACGCCTTCAACGCCTACTACCAGCGCAGCCCCTCG
CCGGCCAGCTGCGACTTCGGCGGCGCCGGCATGCTCGTCGCCACCAACCCAAGTAACCAAACCCTCACTCC------ATC
ACTTGATCTTCTTCAGCTAACTCTGAAACTGTTAGCAACGCCCTTTGATTATCACTGACGAGCTGCTGAATTATTCAGGT
TCAGGAGCTTGCATGTACCAGACATCAGCAGGTTCAGGGTAA-------------------------GTCTCTAGAACAC
ATGATCTTGTCAGGAATTTCAAATCAAACAGTCAAATTCTTACACC--------TCTTCTGCTAAGCTGATCATGCAACT
GTGACATGTGCAGTTCTGCCGCCGGCTACAGCCCGGCGGCGACAGGCACCACCTTCGGGCCGGTGGGCGTGACGCCGAGC
TTCGGGCCAGTGGGCACCAC------GACGGGGACAGGACCGGCGGTCAGCAGTGGAGGGTCGGGCTCGACGGTGCTGAA
TGCGAACAACTACCCCGGCGGGACCTCGATGTACGGCCCGGGCAACCCGGCGGGCTTCTCCGACACCAGCAGCGGCGCCG
C---CCTTAACTGCAGCTGGGTTCTGTCTCTGATCTGGATGTTCACCTTTGCTTATGTCAAGGTGAAGGTGTAGCATCCA
TGTGCTGCTGCTGCTGCTGCTGATGTGTTCTTCTCTTGTTGACATGATATTCACTTGTGTACAGAGATGGATAAATGAAT
TCATAGGGGAGAGAAGACTAGATATTCTTGTGCCTGTGTGTGT-G--TGTAT----TGGACTGAGCTAAGCAGAATGTTG
CTTATAGCTACTCCCTCCGTTCGGAATTACTTGTCTCGGAAATGGACGTATCTAGAACTAAAATACATCTAGATACATCC
ATTTCTGCGACAAGTAATTCCGAACGGAGGGAGTATGAAATAG-------------------------------------
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------------------------------TATGTGTTAGGTGAGCATGGAGTTCATTCTCTGTGAACTATGTTATGATA
TCAAATGA---TCTTCTTGCTAGCTTCATCTT---TTCCATTACCTTTCCTAGTAGACTTTTCGACAC-GACGTATAAGG
GCATGCTCGATTCGTACTCACAGGTTGCTAGATGTTCAGGG-----------------------------CAAAATGTGT
GCATGCTGAATGCTAACACCAAATACCAGAAATCTCAATGTGAAAAGCTCACACCCATGTTTTCTCAGGAA-CAGAAGTA
GTTGCTATATTAGATCTACGATGTACAATGG-GGGTACTTTATAATATGATCAGGCAAATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTATGTGCAAGAAGATCT-ACGACGCACTTGCAACAAAACTAG-AAAATTCTATTGTTACGGTTCGA
AAACACTGTTTTCCATCCTAGATGAGGTTCATGATAGTTCTGCTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTTGGGTCAGGCTTGATGATGAACTTGACATCAAGGAACTCCTTAATGTT
TCGAAGTGATTCTATAGCGCGCGGTGTTAGCTGTCCCACGCGAACCTTTGACACATCGGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAATTGTTTACAAGAGAAACATCATGTGACTTAACAGAAGAAG-------------CAAGATT
CAAAAGGAGCCATAGAAGGAAAG----------GCAGACA--GTCTCAGACATCATCTTGCCAAAATGAACCAAGGACTA
GATTGGCAGAAGAACTTGGATAAAACAA
>chr5D_7
CACACACACATC--------TGCTGACACAAAGTGATTCCAGAGAGCAATGGTGCAAATTAAGCAAGAATCCACTCCTTG
AGGTGCTAGCTGGTGCATGCACATGGCATGAGCAACCAAGAGCAGCCTTTTTGGAGCCCATCTGCTATGCCCCATCTCGT
CCAAACACTGAAATTTCTTCTTCTTCAGAGCCAAGTCTACCACTACCAGAACAGCAAGTCTACTTGGA----------TT
GGATTGGATTGAGGATGACTGACATGGACACACAGTGATCATCAGTGCAAGACTACTAGATCAGGGCCATTTTTGTGTGT
GAGAGACAGTCACCACACAGAGAAAGCACCTTTGTCGTCGATTGGACCTGAAAACCTCTGTGGAGAGCAAAGCATTTTTC
CCTTTTGTGTGACTGTCTGCTGACAAGAACAGCAAGCAAATGACTGTCGCTTGCCAGTGTGTGTGCAGTTACATCACACT
ATCACCACCTTCTACACGTATGCTTTTCTCCTGATGAAAACAAACCAATCAGGGATGCCATATTGCCATTGCCACCCCTG
TCTGAATCAGCATTCTCAAGTGTCATGATGCAATATACATAAATTCCTTTTCGCCGTATTTCGT---CGAATCGTCGGCA
CAAACTCTTTTGTGCATCTTCTGCGACTGAAATGAGAATGATCAAAGTGACAAGATAACATTGAAATTTT-------ATG
TTATTCAGCACCAGGTACATC---------TTTCTTCTTTTTCTCGACAGCAGAGGATGTGCACCTGTATTTGAAAATTG
AAATGCTGTTTCAAAGCAGAAAGAGAAAAGGAGCATCATGCATTGCATTGCATTTTCAAATTGCAACTATTATAATCTGA
AACGAATTACGATCCGCTTTGCCGCC-T-TTTTTTCTCCCCTATTGCTCGTGCTTTTTCCGCTTTGTATCACGCACGTCC
AGCCTTTAAATTTCGCCTTTGGTGAACTAGCTCCTTTCTCCTCGCATTTCCAGCTCCGTTTCCTCCATAGCCTAGTCAGC
AAGCAA----------CCATTGCCGATTGCTCCATCAATGGAGGCTCCGGCTCTCAGCTTGGTTTTGTGTATGCTCCTGC
TCTCGCACGGCTCGGCGCAGGCCAGGAAGACCGTGCCCGGCGTGACGGTAGCCGCCGGCGCCGAGGACGGGTCGTTGGGC
AGGGAGAGCTTCATGGGTCGTGTTGTCGACGTCTCGAGTAA---TTCGCGGCGCCGGCGGGAGCTCCTTGGGGGAGCCAG
GGAGACGACGGCTCGAGACGTGTTCGCGCCGGTGACGAACCCGGTGACGGTGCCGGCGACGAACCCGGCGTCCCCGGGCG
GCATCGTCACCGTGCCGGCGACCAACCCGGGCACGGGCACCGGGTTCCCCACCAACCCCAACCTCCCGCCGCTGTACCCG
GAGCCGTCGGCCACGCCCGACCCGACGACGATGCCGGCGCCGTTCACGAACCCGGTCGCCGCGCCTACGATGCCGGCGCC
GTTCACCGCCCCGGTCACCAACCCGGCCACGACGCCGACGCCGGTCCCCGGCACGTCGCCAATCACCAACCCGGCCACTA
TGTACCCGGGCGGGGGTGCCGGTGGCGGCGTCGCCGTCGGGAGCGCGCCGACGACCCCGGTGTACCAGGCGCCGGCGACG
ACGGTGCCGACGCCGACCACAGTGCAGCCGGCGGCGGGGGCCGGGACAGGGCAGTCCACGTGGTGCGTGGCCAAGGCCGG
GGTGACGGAGGCGGCGCTGCAGGACGGGCTGGACTTCGCGTGCGGCATGGGCGGCGCCGACTGCTCGGCGCTGCAGCCCA
TGGGCAGCTGCTACAACCCCAACACGATCCAGGCGCACGCCTCCTACGCCTTCAACGCCTACTACCAGCGCAGCCCCTCG
CCGGCCAGCTGCGACTTCGGCGGCGCCGGCATGCTCGTCGCCACCAACCCAAGTAACCAAACCCTCACTCCCACTCCATC
ACTTGATCTTCTTCAGCTAACTCTGAAACTGTTAGCAACGCCTTCTGATAATCACTGACGAGCTGCTGAATTATTCAGGT
TCAGGAACTTGCATGTTCCAGACATCGTCAGGTTCAGGGTAAGAATGAACAACTTTGTTCAAGACATGTCTCTAGAACAC
ATGATCTTGTCAAGAATTTCAAATCAAACAGTCGAATTCTTACACTTCTTAAGTTCTTATGCTAAGCTGATCATGCAATT
GCGGCATGTGCAGTTCTGCCGCCGGCTACAACCCGGCAGTGACCGGCACCACA---GGGCCGGTGGGCGTGACGCCAAGC
TTCGGGCCGGTGGGCACCAC------GACGGGGACGGGACCGGCGGTCAGCAGTGGAGGGTCAGGCTCGACGGTGCTGAA
CGCGAACAACTACCCCGGCGGGACCTCGATGTACGGCCCGGGCAACCCGGCGGGCTTCTCCGACACCAGCAGCGGCGCCG
CCTCCCTGAACTGCAGCTGGGTCATGTCTCTGATCTGGATGTTCACCTTTGCTTATGTCAAGGTGAAGGTGTAGCATCCA
TGTGCTGA-----------------TGTGCTCCTCTTGTTGACATGATATTCACTTGTGTACAGAGGTGGATAAATGAAT
TCAGAGGG-------------ATAATTTTGTGCCTGTGTGTGT-G--TGTGTATAATGGACTGAGCTGAGCAGAATGTTG
CTTATAGCTAT---------------------------------------------------------------------
------------------------------------GAAATG--------------------------------------
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--------------------------------TGTGTTAGGTGAGTATGGAGTTCATTCTCTATGAAATATGATATGATA
TCAGATGA---TCTTCTTGCTAGCTTCATCTTCTTTTCCATTACCTTTCG-----GACCTTTTGACACTTAGTACAAT-G
GCATGCGCGATTTGTAGTCACAGGTTGCTAGATGTTCCAGGCTAGTAAGAAGTAAGAAGTAAAAGCGCACCAAAATGTGT
GCATGCTGAATGCTAACACCAAATACCAGAAATCTCAATGT--GAAGCTCACACCCATGTTTTCTCAGGAAACAGAAGTA
GTTGCTCTGTTAGATCTACGATATACAATTGAGGGTACTCTATAG---------GCAGATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTACGGG-----------------------------------G-AAGATTCTCGTGTTGCGGTTCCA
AAACACTGTTTTCCATCCTAGATGAGGTTCATGATGGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCTGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTTGGGTCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATGGCGCGCGGTGTCAGCTGTCCCACGCGAACCTTTGACACATCGGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAGTTGTTTACAAGAGAAACATCATGTGACTTAACAGAAGAAG---CATTTTGAAGCAAGATT
CAAAAAGAGCCATAGAAGGAAAG----------GCAGACACGGCCTCAGACATCATCTTGCCAAAATGAACCAAGGACTA
GGTTGGCAGAAGAACATGCATAAAACAA
>chr4A_30
-----------------------------AAAGTGATTCCAGAGAGCAATGGTGCAAATTAAGCAAGAATCCAGTCCTTG
AGGTGCTAGCTGGTGCATGCACATGGCATGAGCAACCAAGAGCAGCCTTTTTGGAGCCCATCTGGTATGCCCCAACTGGT
CCAAACACTGAAATTTCTTCTTCTTCAGAGCCAAGTCTGCCACTACCAGAACAGCAAGTCTACTTGGA----------TT
GGATTGGGT---------------TGGAGACACAGTGATCATCAGTGCAAGGCTACTAGATCAGGACCGTTTCTGTGTGT
GAGAGACAGTCACCAAGGAGAGAAAGCACCTTTGTCGTCGATTGGACCTGAAAACCTCTGCCGAGAGCAAAGCATTTTTC
CCTTTTGTGTGACTGCCTGTTGACAAGAACAGCAAGCAAATGACTGTCGCTTGCCAGTGTGTGTGCAGTTACATCACACC
CTCACCACCTTCTACATGTATGCTTTTCTCCTGATGAAAATAGGGA-----------------TGCCATTGCCACCCCTT
TCTGAATCAGCATTCCAAAGAGGCAATGCACATAGAT------TTCCTTTTCGCCGTAGCATTTCGCCGAATCGTCGGCA
CAAACTCCTTTGTGCATCTTCTGCGACTG--------------AAAGTGAGAAGATAACATGGAAAATCT-------ATC
TTATTATTAAGCGCCCGGCGCATCTTTTCTTTTTTTTTTTCTCTCGACAGCAGAGGATGTGCACATGTATTTGAAAACTG
AAATGCTGTTTCAAAGCAGAAAGAGAAAAGGAGCATCATGCATTGCGTTGCATTTTCAAATTGCAAGTATTATAATCTGA
AACGAATTACGATCCGCTTTGCCGCC-TTTTTTTTCTCCCCTATTGCTCGTGCTTTT-CCGCTTTGTATCACGCACCTCC
GGCCTTTAAATTTCGCCTTTGGTGAACGAGCTCCTTTCTCCTCGCATTTCCAGCTCCGTTTCCTCCATAGCCTAGTCAGC
AAGCATACTGCCCTCGCCATTGCCGATTGCTTCGTCAATGGCGGCTCCTGCTCTCAGCTTGGTTTTGTGTATGCTCCTGC
TCTCGCACGGTTCGGCGCAGGCCAGGAAGACCGTGCCCGGCGAGGTGGTGCCTGCCGCGGATCGGGATGGAGCGTCGGGC
AGGGAGAGGTTCTTGGGTGGTGGTGTGGAAGGTGCCGCGGGTGGTTCCCGGCGCCGGAGGGAGCTCCTTGCGGGAGCAGG
GGCGACGACGACGCGTGACGTGTTCGCGCCGGTGACCAACCCGGTGACGGTGCCGGCGACCAACCCGGCGTCCCCAGGCG
GCATCGTCACCGTGCCGGCGACCAACCCGGGCACGGGCACCGGGTCCGCGACCAACCCCAACCTCCCGCCGCTGTACCCG
GAGCCGTCGACGACGCCCGACCCGACGACGATGCCTGCGCCGTTCTCGAACCCGGTCGCCGCGCCGACCATGCCGGCGCC
GTTCACCGCCCCGGTCACCAACCCAGCCACGACGCCGACGCCGGTGCCCGGCACGGCGCCAATCACCAACCCGGCCACGA
CGTACCCAGGCGGCAGTACCGGTGCCGGCTCCGGCGTGGGGAGCGTGCCGACGACCCCGGTGTACCAGGCGCCGGCGACG
ACGGTGCCGACGCCGACCACGGTGCAGCCAGCGGCGGGGG---GGACGGGGCAGTCAACATGGTGCGTGGCGAAGGCCGG
GGTGACGGAGGCGGCGCTGCAGGACGGGCTGGACTACGCGTGCGGCATGGGCGGCGCCGACTGCTCGGCGCTGCAGCCCA
TGGGCAGCTGCTACAACCCCAACACGATGCAGGCGCACGCCTCCTACGCCTTCAACGCCTACTACCAGCGCAGCCCCTCG
CCGGCCAGCTGCGACTTCGGCGGCGCCGGCATGCTCGTCGCCACCAACCCAAGTGACCAAACCCTCACTCCCACTCCATC
ACTTGATCTTCTTCAGCTGGCTCTGAAACTGTTAGCAACGCCTCCTGATTATCACTGACGAGCTGCTGAATTATTCAGGT
TCAGGAACTTGCATGTACCAGGCATCATCAGGTTCAGGGTAAGAATGAACAA-TTTGTTCAAGACATGTCTCTAGAACAC
ATGATCTTGTCAGGAATTTCAAATCAAACAGTCAAATTCTTACACTTG--------TTCTGCTAAGCTGATCATGCAACT
GTGACATGTGCAGTTCTGCCGCCGGCTACAGCCCGGCGGCGACGGGCACCACCTCCGGGCCGGTGGGCGTGACGCCGAGC
TTCGGGCCGGTGGGAACCACGACCGGGACGGGGACGGGACCGGCGGTCAGCAGTGGAGGGTCAGGCTCGACGGTGCTGAA
CGCGAACAACTACCCAGGCGGGACCTCGATGTACGGCCCGGGCAACCCGGCCGGCTTCTCCGACACCAGCAGCGGCGCCG
CCTCCCTGAACTGCAGCTGGGTCCTGTCTCTGATCTGGATGTTCACCTTTGCTTATGTCAAGGTGAAGGTGTAGCATCCA
TGTGCTGCTGCTGCTGCTGCTGATGTGCTCTTCTCTTGTTGACATGATATTCACTTGTGTACAGAGATGGATAAATGAAT
TCAGAGGGGAGAGAAGACTAGATAATTTTGTGCCTGTGTGTGT-GTGTGTAT----TGGACTAAGCTGAGCAGAATGTTG
CTTATAGCTAA---------------------------------------------------------------------
------------------------------------GAAATAG-------------------------------------
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------------------------------TATGTGTTAGGTGAGCATGGAGTTCATTCTCTATGAACTATGTTATGATA
TCAAATGATATTCTTCTTGCAAGCTTCATCTTCTTTTTCATCACCTTTCATAATAGACCTTTCGACACTGAGTATAAT-G
GCATGCGCGATTTGCAGTCACAGATTGCTAGATGTTCCAGGCTAGTAATAAGTAGGAAGTAAAAGCACACCAAAATGTGT
GCATGCTGAATGCTAACACCAAATACCAGAAATCTCTATGTTAAAAGCTCACGCCCATGTTTTCTCAGGAGACAGAAGTA
GTTGCTCTATTAGATCTATGATATACAATTGAGGGTACTCTATAATATGCTCAAGCAGATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTACGGG-------------------------------------AAGATTCTCGTGATGCGGTTCCA
AAACATTGTTTTCCATCCTAGATGAGGTTCATGATAGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTTGGGTCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATAGCGCGCAGTGTCAGCTGTCCCACGCGAACCTTTGACACATCGGGCGGGCACAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAATTGTTTACAAGAGAAACATCATGTGACTTAACAGAAGAAGAAGCATTTTGAAGCAAGATT
CACAAAGAGCCATAGAAGGAAAG----------GCAGATA-------AGATATAATCTTGCCAAAATGAACCAAGGACTA
GGTTGGCAGAAGAACTTGCATAAAACAA
>chr5D_2461
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--------TGCTGCTGCTGCTGATGTGTTCTTCTCTTGTTGATATGATATTCACATGTGTACAGAGATGGATAAATGAAT
TCAGAGGGGAGAGAAGACTAGATATTTTTGTGCCTGTGTGTGTAG--TATAT----TTGACTGAGCTGAGCAGAATGTTG
CTTATAGCTAT---------------------------------------------------------------------
------------------------------------GAAATACTCCCTCTGTCCGGAATTACTTGTCTGGAGTTACTTGT
CTTAGTGCCTGTGTGTGTAGTATATTTGACTGAGCTGAGTAGAATGTTGCTTATAGCTATGAAATACTCCCTCTGTCCGG
AATTACTTGTCTGGAGTTACTTGTCTTAGTGCCTGTGTGTGTAGTATATTTGACTGAGCTGAGTAGAATGTTGCTTATAA
ATACTCCCTCTGTCTGGAATTACTTGTCTGGGGTTACTTGTCTTGGATACATCCGTATCAAGACAAATT-----------
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-----TGA---TCTTCTTGCTAGCTTCATCTTCTTTTTCATTACCTTTCATAATAGACCTTTTGACAA-GAGTATAAT-G
GCATGCTCGATTCGTAGTCACAAGTTGCTAGATGTTCCAGGCTAGTAAGAAGTAAAAGCACATC--------AAATGTGT
GATCTCA-----------------------------AATGG--AAAGCTCACACCCATGTTTTCTCAGGAG---------
---------------------------------GGTACATGATAATACGATCAGGCAAATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTACAGGGAAGAAGATCT-ACGACACACTTGCAACAAAACTTG-AAAATACTTGTTTTGCGGTTCCA
AAACACTGTTTTCCATCCTAGATGAGGTTCATGATAGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTTGGGTCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATAGCGTGCGGTGTCAGCTGTCCCACGCGAACCTTTGACACATCAGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCTCTGCAAATTGTTTACAAGAGAAACATCATGTGACT-AACAAAAGAAA---CATTTTGAAGCAAGATT
CAGAAAGAGCCATAGAAGGAAAG----------GCAGACACGGTCTCAGACATTATCTTGCCAAAATGAACCAAGGACTA
GGTTGGCAGAAGAACTTGCATAAAAC--
>chr5B_2464
TGCGC---------------------------------------------------------------------------
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-----------------TGCTGCTGTGTTCTTCTCTTGTTTATATGATATTCACTTGTGTACAGAGATGGATAAATGAAT
ACAGAGAGGAGAGAAGAC-AGATATTTTTGTGCCTGTGTGTACTCCCTGTCT----------------------------
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---------------------------------------------CCCCTGTCCTGAATAACTTATCTTAT---------
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----------------------------------------------ATACATCCGTATCAAGACAAATGTAAGACAAGTA
ATTTGGGAAGGAGGTAATATGTGGAGGTAATATGTGTTAGGTGAGCATGGAGTTCATTCTCTATGAACTA--TTGTGATA
TCAGATGA---TCTTCTTGCTAGG---------------------------------CCTTTTGACAC---GTATGAT-G
GCATGCTCGATTCATAGTCACAGGTTGCTTGATGTTTCAGGCTAGTAAGAAGTAAACGCACATC--------AGATGTGT
GATCTCA-----------------------------AATGG--AAAGCTCACACCCATGTTTTTTCAGGAG---------
---------------------------------GGTACATGATAATATGATCAGGCAAATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTACGGGGAAGAAGATCT-AC---------------------G-AAAATTCTTGTGTTGCGGTTCCA
AAACACTGTTTTTCATCCTAGATGAGGTTCATGATAGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCTACACATTTTAGACTGACCGTGTTTGAGTTTGGGTCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATAGCGTGCGGTGTCAGCTGTCCCACGCGAACCTTTGACACATCAGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAATTGTTTACAAGAGAAACATCATGTGACT-AACAGAAGAAG---CATTTTGAAGCAAGATT
CAGAAAGAGCCATAGAAGGAAAG----------GCAGACACGGTCTCAGACATTATCTTGCCAAAATGAACCAAGAACTA
GGTTGGCAGAAGAACTTGCATAAAAC--
>chr5A_3013
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--------------------------------GGGTACATGATAATACGTA-AGGCAAATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTATGGGGAAGAAGATCTAACGACACACTTGCAACAAAACTTGAAAAATTCTTGTGTTGCGGTTCGA
AAACACTGTTTTCCATCATAGATGAGGTTCATGGTAGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTTGTATCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATAGCGTGCGGTGTCAGCTGTCCCACGCGAACCTTTGACACATCAGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAATTGTTTACAAGAGAAACATCATGTGGCT-AACAGAAGAAG---CATTTTGAAGCAAGATT
CAGAAAGAGCCATAGAAGGAAAG----------TTAGACACGGTCTCAGACATTATCTTGCCAAAATGAACCAAGGACCA
GGTTGGCAGAAGAACTAGCATAAAA---
>chr5B_3037
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--------------------------------------------------------AAATCCATTCTGGATCAACTAGCT
TACATCAAAACTACTACAGGGAAGAAGATCT-ACGACACACTTGCAACAAAAGTTG-AAAATTCTTGTGTTGCGGTTCCA
AAACACTGTTTTCCATCCTAGATGAGGTTCATGATAGTTCTGTTTATGAAATCTTCCGAGCAAGATTCTTCACTCCCGCA
CCAACACATTTTAGAGTGACCGTGTTTGAGTTCGGGTCGGGCTTGATGATGAACTTGACATCAAGGAACTCCTTGATGTT
TCGAAGTGATTCTATAGCGTGCGGTGTCAGCTGTCCCACGCGAACCTTGGACACATCAGGCGGGCATAGAGCGCACAGCA
TGAACAGAAGGCCCTGCAAATTGTTTACAAGAGAAACATCATGTGACT-AACAAAATAAA---CATTTTGAAGCAAGATT
CAGAAAGAGCCATAGAAGGAAAGGCAGACACAGGCAGACACGGTCTCAGACATTATCTTGCCAAAATGAACCAAGGACTA
GGTTGGCAGAAGAACTTGCATAAAAC--
>SNPs
----------SSSSSSSSSS------------------------------------------------------------
----S---------------------------------------------------------------------------
----------S----------------S---------S-----S-----------S---S---SSS-SSSSSSSSSSS--
-------------S----S-----S-------------------------------------------------------
---------------------------------------------------------S--S---------------S-SS
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----S------------S-SSSSS--------------------S-------S------------------S-------
--------------------------------S----S--------------------------------SSSSSSS---
--------------------------------------------------S--S-------S---S-------------S
S--S------S-----S------------------------------------------------------------S--
-----------S--------------S-----------------------------------------------------
---------------------------S----------------------------------------------------
------------------------S-----------------S------------------S------------------
-------------------------------S----------------------SS--S---------------------
--------------------------S-----S-----------S--------------------------------S--
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----------------------S--------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------S----------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-S-----------------------------------
------S--------------------S----------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------------------------S----------S-------------------------
--------S--------------------------S--------------------------S-----------------
S-------------------------------------------------------------------------------
-------S--------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------S----------------------------------------S------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------S--S-----S------------SSSSS-SS-
----------------S--------------------SS-----------------------------------------
-----------------------------------------S--------------------------------------
------S---------------S------S--------------------------------------------------
------------------S-S----------------S----------------S----------SS----S--------
------------------------------------------S-------------------------------------
--------------------------------------S-----------------------------------S-----
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-S----------------S---------
>forward_225
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CCAGAACAGCCAGTGTACCA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_1878
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TGCCTCCTACGCCTTCAAC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CATTGCCACCCCTG
TCTGAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_2488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAACTGCAGCTGGGTTCTGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_2043
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAAACTGTTAGCAACGCCC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3278
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGG
GCATGCTCGATTCGTAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
