>input_sequence_48810
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---------ATGCTGTTGCCTGCTGCTTCCTCGCCTCCCCTGTCGCGGGTGGCGACCTCCAGCGCCCACGGCGAGGACTC
CCCCTACTTCGCCGGGTGGAGAGCCTACGACGACGACCCCTACGACGCCGTCACCAACCCCGGCGGCGTCATCCAGATGG
GCCTCGCGGAGAACCAGGTCTCCTTCGACCTCCTGGAGGGGTTCCTGAGGGAGCACCCGGAGGCGGCCGGGTGGGGCGGC
GCCCGCCCCGGCTCCGGCGTCGCCAGCTTCCGGGACAACGCCCTCTTCCAGGACTACCACGGCCTCAAAACCTTCCGGAA
GGTACATCGTAGATGCACAAGAGCATGTGTCCTCTGCTTTATCTTGCTTGTCACCGACGGCGTGGACTGATCTTTGTGGC
GGTCCGGTGCCCTTTGCTTGCAGGCGATGGCGAGTTTCATGGAGAAGATAAGGGGCGGCAAAGTGAGGTTTGACCCTGAC
CGCATCGTGCTCACGGCCGGCGCGACGGCGGCCAACGAGCTGCTCACGTTCATCCTCGCCAACCCGGGAGACGCGCTGCT
GATCCCTACGCCTTACTACCCGGGGTAAGCAAC--------CAATCAACGCAAGCCACTACTGTTCCATTGCGTGTGCTC
GCTCATGTCCTGACATGCATGGCGCCCTGCAGGTTTGATCGGGACTTGCGGTGGAGGACGGGGGTGAACATCGTGCCCGT
GCACTGCCACAGCTCCAACGGGTTCCAGGTCACGGTGGCCGCGCTCGAGGCGGCGTACGAGGAGGCCGCGGCGGCGGGGA
TGAGCGTCCGCGGCGTCCTTCTCACGAACCCGTCCAACCCGCTCGGCACCACGGTGGAGCGGTCGGTGCTGGAGGACGTG
CTCGACTTCGTCGTGCGCAAGAACATCCACCTCATCTCCGACGAGATATACTCCGGCTCGGTGTTCGCCGCGCCGGACCT
CGTCAGCGTGGCGGAGCTCGTCGAGTCGCGCGGCGACGACGTCGCCGGGCGCGTGCACATCGTGTACAGCCTGTCCAAGG
ACCTGGGGCTCCCGGGGTTCCGCGTCGGCGTGGTGTACTCGTACAACGACGCGGTGGTCACGGCGGCGCGGCGCATGTCC
AGCTTCACGCTCGTGTCGTCGCAGACGCAGAAGACGCTCGCCGCCATGCTCTCCGACGCCGCGTTCGCCCAGGAGTACAT
CCGCACCAACCGCGAGCGCCTCAGGGTGCGCCACGACCACATGGTGGCCGGGCTGGCCCGCTCCGGCGTGCCGTGCCTGC
CCAGCAATGCCGGGCTGTTCGTGTGGATGGACATGCGGCGGCTGCTCGGCGACGGCGGCGAGGCCACGGTCGCCAACGAG
CTGAGGCTGTGGGACCTGATGCTGCACGAGGTGAAGCTCAACATCTCGCCGGGGTCGTCGTGCCATTGCTCGGAGCCCGG
GTGGTTCAGGGTGTGCTTCGCCAACATGAGCCTGGACACGCTGGACGTTGCACTGGCGAGGATGAGCCGCTTCATGGACA
GGTGGAACAAGGCGACAACGCTGCAAGAACATCACTAG------------------------------------------
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>chr3D_1_TraesCS3D01G108700
ACTATGTTACACTTACACTAGTATGTCTAACAAATGCTGCAATCTTCATATCTTCTACTCCCTCTGTCCCATA--GTAAG
AAAGTTCAAAAAACGTTTGTATATTACGGAAAGGAAAGAGTACTAGCTACCACTCATGTACGCCTCAAGCACAAAAGAGA
AAAAGGAAAACCTGCACGCTGCTACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGATATTTCAGCAAGTGACTACATAC
GGAACAAAATAAATGAATCTACATTCTAAAATATGTCTATATACATACGTATTTGTTACTCCATTTAAAATCTCTGAAAG
GACAAATATATAGAAACAAAGGGAGTAGTTTCTAACAGAAGACTGAATGTGAAGGCAGAGAAATATTAGCTATCGTTGTT
AAACCTTTCCTTTCTTATCTTTTGTGCTTTATAACGGTACTCCCTATTAACTTTGTGCTAAATCAAGGTCAATTAACATG
TCCGGTCACTGCCAGCGGGCAC-------------------GTCCGTGGGCGTATAGGGACTCATATTAGGCAACCATG-
GTTGTACATGCTCTAACCATTGGTAAAATGTTACGTTGTGTGAGGTTATAGGAATATCAACCATCAATTATC--AAATAT
ATATAACATTAGCCATTAATTGTAAAATAATAATAATAATAATAGCCATTAATTGGCAAAAATTAAACATTAACCATGAA
TCGTCAAAAAAAATGAATATTTGCCATTTTAAAA-TTTGGGGCTCTTGTGACAATTGGGTCCTCCCCCGGGGGGCAACTT
TGACAACCGAACGATTTCACACTAGTATATATA----------------------CCGGC--ATTTCTGCCTATATATAG
CCCCAAGACCCACCAGGATCACCACACCCAGCTCTGCCCTGCGAGCGCATTCACATTCTTGAGCTGTGCCGGCTTTGCTT
CTTGCCATTGCCTTGCATTGCAAGCTTTCAACCTCGAAAGAGTCCTGTTCCATTGCTTGTCACTCCAAGGCGCAAAGGCC
ATGGGCGGCATGCTGTTGCCTGCTGCTTCCTCGCCTCCCCTGTCGCGGGTGGCGACCTCCAGCGCCCACGGCGAGGACTC
CCCCTACTTCGCCGGGTGGAGAGCCTACGACGACGACCCCTACGACGCCGTCACCAACCCCGGCGGCGTCATCCAGATGG
GCCTCGCGGAGAACCAGGTCTCCTTCGACCTCCTGGAGGGGTTCCTGAGGGAGCACCCGGAGGCGGCCGGGTGGGGCGGC
GCCCGCCCCGGCTCCGGCGTCGCCAGCTTCCGGGACAACGCCCTCTTCCAGGACTACCACGGCCTCAAAACCTTCCGGAA
GGTACATCGTAGATGCACAAGAGCATGTGTCCTCTGCTTTATCTTGCTTGTCACCGACGGCGTGGACTGATCTTTGTGGC
GGTCCGGTGCCCTTTGCTTGCAGGCGATGGCGAGTTTCATGGAGAAGATAAGGGGCGGCAAAGTGAGGTTTGACCCTGAC
CGCATCGTGCTCACGGCCGGCGCGACGGCGGCCAACGAGCTGCTCACGTTCATCCTCGCCAACCCGGGAGACGCGCTGCT
GATCCCTACGCCTTACTACCCGGGGTAAGCAAC--------CAATCAACGCAAGCCACTACTGTTCCATTGCGTGTGCTC
GCTCATGTCCTGACATGCATGGCGCCCTGCAGGTTTGATCGGGACTTGCGGTGGAGGACGGGGGTGAACATCGTGCCCGT
GCACTGCCACAGCTCCAACGGGTTCCAGGTCACGGTGGCCGCGCTCGAGGCGGCGTACGAGGAGGCCGCGGCGGCGGGGA
TGAGCGTCCGCGGCGTCCTTCTCACGAACCCGTCCAACCCGCTCGGCACCACGGTGGAGCGGTCGGTGCTGGAGGACGTG
CTCGACTTCGTCGTGCGCAAGAACATCCACCTCATCTCCGACGAGATATACTCCGGCTCGGTGTTCGCCGCGCCGGACCT
CGTCAGCGTGGCGGAGCTCGTCGAGTCGCGCGGCGACGACGTCGCCGGGCGCGTGCACATCGTGTACAGCCTGTCCAAGG
ACCTGGGGCTCCCGGGGTTCCGCGTCGGCGTGGTGTACTCGTACAACGACGCGGTGGTCACGGCGGCGCGGCGCATGTCC
AGCTTCACGCTCGTGTCGTCGCAGACGCAGAAGACGCTCGCCGCCATGCTCTCCGACGCCGCGTTCGCCCAGGAGTACAT
CCGCACCAACCGCGAGCGCCTCAGGGTGCGCCACGACCACATGGTGGCCGGGCTGGCCCGCTCCGGCGTGCCGTGCCTGC
CCAGCAATGCCGGGCTGTTCGTGTGGATGGACATGCGGCGGCTGCTCGGCGACGGCGGCGAGGCCACGGTCGCCAACGAG
CTGAGGCTGTGGGACCTGATGCTGCACGAGGTGAAGCTCAACATCTCGCCGGGGTCGTCGTGCCATTGCTCGGAGCCCGG
GTGGTTCAGGGTGTGCTTCGCCAACATGAGCCTGGACACGCTGGACGTTGCACTGGCGAGGATGAGCCGCTTCATGGACA
GGTGGAACAAGGCGACAACGCTGCAAGAACATCACTAGACCAGTTCTTCAAAGAAACAAAAAAAG----ATACATTAGAC
AAAGTAAAAGTAA-TTTTTTGTGGCAAATCCATTGCCATTGT--------GAGGAAGTACGTAATCGATCCTGGTGACAC
ATCAATTTTGTATGGGGATTTTTTTTCTCTCGAATAGAGAGATGCTATCCCATACTATTATATGTAAGAGTGGTTAATTC
TTGGAATAAGTCTTCTTTGCAATCTTAAACTATTGAGTTTGCTAAACTAGTACTCCCTCCGTCCCATAATATAAGAGCGT
TTTTTACACTAGTGTAAAAAACGCTCTTATATTATGGGACGGAGGGAGTAGCTTGGTTCACTTAACCCTTGAAAAATAAA
TTCTCCTCACTCAACCTCCTAAACCTTTTGTATCCACTCTGATTTGTTTCTAAAATCAGCAAATATGTTCATTCCTTATT
AAAAAAA---------------------------------------------------------TATGAGTGATGCCATA
CATACGACATCCTTTGTCCGATTTTGGTACGAT-CCTACCGATCACACCGTCCATGGATAGGCAAAATGCAGCCCCAACC
ATTTGATTGACTGTGGTATAGAGATCGTAGCACTATATGTCATACATGGAGTAGTTCCCAAAAATATATG----AAAATA
TCACACATACGACAAAACTAGAATGATGCACCCCAAATGTTGTCGCAATAATATCTTTTAAATTAGTTAGATGT---TCA
TCCTTTGATCTCATCAAAATGGGGTTTTGCTATTTATCAAGAAACCGGGAAAATAACTATTTTTAAATGAACAGTAACAA
ATCATTGGATCCAAACATCTAGACCCACGCAAGTATAAAATCACAACAAATGTTTTATCAAACGGTA------------T
GTGGACGAAGAAAACCATTTCTGAGTTGGCTCAGCTATAGCTACTCCCTATCAAAATGAA-GAATCTCACTTATGGGCTC
ATGGCATCAATG-TGAAATCAAAACAATGTTAACACTAGCATGGCAAAAGAAACAAAAATGCTACGTAGACCGAATCCAA
CTTACCGGCA
>chr3B_1
ACTATGTTACTTTTACACTAATATGTCTAACAAATGCTGCAATCTTCATGTCTTTTACTCCCTTTGTCCCATGATGTAAG
AAAGTTCAG------------TATTACAGGACGGAAAGAGTACTAGCTACCACTCATGTACGCCTCAAGCACAAAAGAGA
AAAAGAAAAACCTGCACGCTGCTA--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GTTTCTAACAGAAGACTGAATGTGAAGGCAGAGAAATATTAGCTATCGTTGTT
AAACCTTTCCTTTCTTATCTTTTGTGCTTTATAACGGTACTCCCTATTCACTCTATGCTAAATCAAGGTCAATTAACATG
TCCGGTCACTGTCAACGGGCAC-------------------GTCCATGGATGTATAGGGACTCATATTGGGCAACCATTT
GTTGTACATGCTCTAACCATTGGTAAAATCTTACGTCGCGTGAGGTTATAGGAATATCAGCCATCAATTATCAAAAATAT
ATATAACATTAGCCATTTGTAA---------AATAATAATAATAGCCATTAATTGTCCAAAAATGAACATTAACCATTAA
TCGT--AAAAAAATGAATATTTGCCATTTTAAAA-TTTGGGGCTCTTGTGACAACTGGGTCCTCCCCCGG-GGGCAACTT
TGACAACCGAACGATTTCACACCAGTATATACATGCAGGTTCCAAAGTGTATTTCCCGGC--ATTTCTGCCTATATATAG
CCCCAAGACCAACCAGGATCACCACACCCAGCTCTGCCCTGCGAGCGCATTCACATTCTTGAGCTGTGCCAGCTTTGCTT
CTTGCCATTGCCTTGCATTGCAAGCTTTCAACCTCGAAAGAGTCCTGTTCCATTGCTTGTCACTCCAAGGCGCAAAGACC
ATGGGCGGCATGCTGTTGCCTGCTGCTTCTACGCCTCCCCTGTCGCGGGTGGCAACCTCCAGCGCCCACGGCGAGGACTC
CCCTTACTTCGCCGGGTGGAGAGCCTACGACGACGACCCCTACGACGCCGTCACCAACCCCGGCGGCGTCATCCAGATGG
GCCTCGCCGAGAACCAGGTCTCCTTCGACCTCCTGGAGGGGTTCCTGAGGGAGCACCCGGAGGCGGCTGGGTGGGGCGGC
GCCCGCCCCGGCTCCGGCGTGGCCAGCTTCCGGGACAACGCCCTGTTCCAGGACTACCACGGCCTCAAAACCTTCCGGAA
GGTACGTCGTACATACACAAGAGCGTGTGTACTCTGCTTTATCTTGCTTGTCTCCGACGGCGTGGACTGATCTTTGTGGC
GGTCCGGTGCCCTTTGCTTGCAGGCGATGGCGAGTTTCATGGAGAAGATAAGGGGCGGCAAAGTGAGGTTTGACCCTGAC
CGCATCGTGCTGACTGCCGGCGCGACGGCGGCCAACGAGCTGCTCACGTTCATCCTCGCCAACCCGGGAGACGCGCTGCT
GATCCCTACGCCTTACTACCCGGGGTAAGCAACAGACCAACCAACCAGAGCAAGTCACTACTGTTCCATTGCCCGTGCTC
T----TGTCCTGACATGCATGGCGCCCTGCAGGTTTGATCGGGACTTGCGGTGGAGGACGGGGGTAAACATCGTGCCCGT
GCACTGCCACAGCTCCAACGGGTTCCAGGTCACGGTCGCCGCGCTCGAGGCGGCGTACGAGGAGGCCGCGGCGGCGGGGA
TGAGCGTCCGCGGCGTCCTTCTCACGAACCCGTCCAACCCGCTCGGCACCACGGTGGAGCGGTCAGTGCTGGAGGACGTC
CTAGACTTCGTCGTGCGCAAGAACATCCACCTCATCTCCGACGAGATATACTCCGGCTCGGTGTTCGCCGCGCCGGACCT
CGTCAGCGTGGCGGAGCTCGTCGAGTCGCGCGGCGACGACATCGCCGGGCGCGTGCACATCGTGTACAGCCTGTCCAAGG
ACCTGGGGCTCCCGGGGTTCCGCGTCGGCGTGGTGTACTCGTACAACGACGCCGTCGTCACGGCCGCGCGGCGCATGTCC
AGCTTCACGCTCGTGTCGTCGCAGACGCAGAAGACGCTCGCCGCCATGCTCTTGGACGCCGCGTTCGCCCAGGAGTACAT
CCGCACCAACCGCGAGCGCCTCAGGGTGCGGCACGACCACATGGTGGCCGGGCTGGCCCGCTCCGGCGTGCCGTGCCTGC
GCAGCAATGCCGGGCTATTCGTGTGGATGGACATGCGGCGGCTGCTCGGCGACGGCGGCGAGGCCACGGTCGCCGACGAG
CTGAGGCTGTGGGACCTGATGCTGCACGAGGTGAAGCTCAACATCTCGCCGGGGTCGTCGTGCCATTGCTCGGAGCCAGG
ATGGTTCAGGGTGTGCTTCGCCAACATGAGCCTGGACACGCTGGACGTTGCACTGGCGAGGATGAGCCGCTTGATGGACA
GGTGGAACAAGGCGACAACGCTGCAAGAACAGCACTAGACCAATTCTTCAAACAAAC-AAAAAAG----ATACATTAGAC
AAAGTAAAAGTAAATTTTTTGTGGCAAATCCATTGCCATTGT--------GAGGAAGTACGTAACCGATCCTGGTGACAC
ATCAATTTTGTATGGGGATTTTTTTTCTCTCGAATAGAGAGATGGTATCCCATACTATTATATGTAAGAGTGGTTAATTC
TTGGAATAAGTCTTCTTTGCAATCTTAAACTATTCAGTTTGCTAAACTAGT-----------------------------
-------------------------------------------------AGCTTGGTTCACTTAACCCTTGAAAAATAAA
TTCTCCTCACTCAACCTCCTAAACTTTCTGTGTCCACTCTGATTTGTTTCTAAAATCAGCAAATCTGTTCATTTCTGATT
TAAAAAAATATGAGTAATGCCGTACAAATGACATCCTTTGTCTGATTTTTCCTGATTAAAAAAATATTAGTGATGCCATA
CGTACGACATCCTTTGTCCGATTTTGGTACGGAACCTACCAATCACACCGTCCATGGATAGGCAAAATGCAGCCCCAACC
ATTTGATTGACTGTGGTATAGAGATCGTAACACTATATGTCATACATGGAGTAGCTCCAAAAAATATATG----AAAATA
TCACACATACGACAAAACTACAATGATGCACCCCAAATGTTGTCGCAATAATATCTTTTAAG-TAGTTAGATGT---TCA
TGTTTTGATCTCATCAAAATGGGGTTTTACTATTTATCAAGAAACCAGGAAAATAACTATTTTTAAATCAACGGTAACAA
ACCATTGGACCCACGCAA----------------------------------------CAAACGGTA------------T
GTGGACAAAGAAAACCATTTCTAAGTTGACTTGGCTATAGTTACTCCCTATCAAAATGAAAGGATCTCAATCATGGGCTC
TTGGCATCGATGTTGAAATCAAAACAATGTCAAGACTAGCATGGCAAAAGAAACAAAAATGCTACGTAGACGGAATCCAA
CTTACCGGCA
>chr3A_1
ACTATGTTACACTTACATTAGTATGTCTAACAAATGGTGCAATCTCCATGTCTTCTACTCCATCA-TCCCATAATATAAG
ATAGTTCAAAAAATGCTTTTATATTACGGGACGTAAAGAGTACTAGCTACCACTCATGTACGCCTCAAGCACAAAAGAGA
AAAAGGTAAACCTGCACGCTGCTA--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GTTTATAACAGAAGACTGAATTTGAAGGCAGAGAAATATTAGCTATCATTGTT
AAATCTTTCCTTGCTTATCTTGTGTGTTCTATAATGGTACTCTCTATTAACTTTGTGCTAAATCAAGGTCAATTAATATG
TCCGGTCACTGCCAGCAGCGTGTCCGGAGCTGTCCGGACGTGTCCATGGGCGTATAGGGACTTATATTAGGCAACTATG-
GTTGAACATGCTCTAACCATTGGTAAAATCTTACATCATGTCAGGTAATAGGAATATTAGCCATTAATTATTGAAAATAT
ATATAACG-------------------------TAATAATATTAGCCGTTAATTGTCAAAAAATAAACATTAGCCATTAA
TTGTCAGAAAAAATGAATATTAGCCATTTTAAAATTTTGGGGCTCTTGTGACAACTGGGTCCTCCCCCGG-GGGCAACTT
TGACAACCGAATGATTTCACACCAGTATATATA----------------------CTGCCATATTTTTGCCTATATATAT
CCCCAAGACCAGCCAGGATCACCACACCCAGCTCTACCTTGCGAGCGCATTCACATTCTTGAGCTGTTCTAGCTTTGCTC
CTTGCCATTGCATTGCGTTGCGAGCTTTCAACCTCAAAAGAGTCCTGCTCCATTGCTTGTCACTCCAAGGCGCAAAGACC
ATGGGCGGCATGCTGTTGCCCGCTGCTTCCTCGCCTCCCCTGTCGCGGGTGGCGACCTCCAGCGCCCACGGCGAGGACTC
CCCCTACTTCGCCGGGTGGAGGGCCTACGACGACGACCCCTACGACGCCGTCACCAACCCCGGCGGCGTCATCCAGATGG
GCCTCGCGGAGAACCAGGTCTCCTTCGACCTCCTGGAGGGGTTCCTCAGGGAGCACCCGGAGGCGGCCGGGTGGGGCGGC
GCCCGCCCCGGCTCCGGCGTCGCCAGCTTCCGGGACAACGCCCTCTTCCAGGACTACCACGGCCTCAAAACCTTCCGGAA
GGTACGTCGTTGATGCACAAGAGCATGTGTGCTCTGCTTTATCTTGCTTGTCTCCGACGGCGTGGACTGATCTTTGTGGC
GGTCCGGTGCCCTTTGCTTGCAGGCGATGGCGAGTTTCATGGAGAAGATAAGGGGCGGAAAGGTGAGGTTTGACCCTGAC
CGCATCGTGCTCACCGCCGGCGCGACGGCGGCCAACGAGCTGCTCACGTTCATCCTCGCCAACCCGGGAGACGCGCTGCT
CATCCCTACGCCGTACTACCCGGGGTAAGCAACAAGCCAACCAACCAGAGCAAGCCACTACTGTTCCATTGCCCGTGCTC
T----TGTCCTGACATGCATGGCGCCGTGCAGGTTTGATCGGGACTTGCGGTGGAGGACGGGGGTGAACATCGTGCCCGT
GCACTGCCACAGCTCCAACGGCTTCCAGGTCACGGTCGCCGCGCTCGAGGCGGCGTACGAGGAGGCCGCGGCGGCGGGGA
TGAGCGTCCGCGGCGTCCTTCTCACGAACCCGTCCAACCCGCTCGGCACGACGGTGGAGCGGTCGGCGCTGGAGGACGTC
CTCGACTTCGTCGTGCGCAAGAACATCCACCTCATCTCCGACGAGATATACTCCGGCTCCGTGTTCGCCGCGCCGGACCT
CGTCAGCGTGGCGGAGCTCGTCGAGTCGCGCGGCGACGACGTCGCCGGGCGCGTGCACATCGTGTACAGCCTCTCCAAGG
ACCTGGGGCTCCCGGGGTTCCGCGTCGGCGTGGTGTACTCGTACAACGACGCGGTGGTCACGGCCGCGCGGCGCATGTCC
AGCTTCACGCTCGTGTCGTCGCAGACGCAGAAGACGCTCGCCGCCATGCTCTCCGACGCCGCGTTCGCACAGGAGTACAT
CCGCACCAACCGCGAGCGCCTCAGGGTGCGGCACGACCACATGGTGGCCGGGCTGGCCCGCTCCGGCGTGCCGTGCCTGC
CCAGCAATGCCGGGCTGTTCGTGTGGATGGACATGCGGCGGCTGCTCCGTGACGGCGGTGAGGCCACGGTCGCCGACGAG
CTGCGGCTGTGGGACCTGATGCTGCGCGAGGTGAAGCTCAACATCTCGCCGGGGTCGTCGTGCCATTGCTCGGAGCCCGG
GTGGTTCAGGGTGTGCTTCGCCAACATGAGCCTGGACACGCTGGACGTTGCACTGGCGAGGATGAGCCGCTTCATGGACA
GGTGGAACAAGGCGACAACGCTGCAGGAACAGCACTAGACCAAATCTTCAAACAAAC-AAAAAAGATACATACATTAGAC
AAAGTAAAAGTAAATTTT-TGTGGCAAATCCATTGCCATTGTAATCAATTGAGGAAGTACGTAACCGATCCTGGTGACAC
ATCAATTTTGTATGGGGATTTTTTTTCTCTCGAACAGAGAGATGGTATCCCATACTATTATATGTAAGAGTGGTTCATTC
TTGGAATAAGTCTTCTTTGCAATCTTAAACTATT----------------------------------------------
-------------------------------------------------AGCTTGGTTCACTTAACCCTTGAAAAATAAT
TTGTCCTCACTCAACCTCCTAATCTTTTTCTATCCACTCTGATTTGTTTCAAAAATCAGCAAATCTCTTCATTTCTTATT
AAAAAAAGAAAC-------------------------------------------------------GAGTGATGCCATA
CATACAACATCCTTTGTCCGATTTTGGTACA-AACCTACCGATCACACCGTCCATGAATAGGCAAAGTGCAGCCCCAACC
ATTTGATTGACTGTTGTATAGAGATCGTAGGATAAAATATCATATGCGGAGTAGTTGCCGAAAAGAAATATGAAAAAATA
TCACACATAAGACAAAATTACAATAATGCACCCC-AATGTTGTCGCAATAATATCTTTTAAGATAGTTAGATATTCATCA
TCTTTTGATCTCACCAAAATGGGGTTTTGCTATTTATCAAGAAACCTGGAAAATAACTAATTTCAAATCAATGGTAACAA
ATCATTGGATCCAAACATCTAGATCCTCGCAAATATAAAATCACGACAAATGTTTTATCAAACGGCAATCGATGTGGATT
GTGGATAGAGAAAACTATTTCTAAGTTGACTCGGCTATAGTTGCTCCCTATCAAAATGGG-GGATCTCAGTCATGGCAC-
-------CGATGTAGAAATCAAAACAATGTTAACACTAGCATCGCAAATGAAACAAAAATGCTACGCATACGGAACCCAA
CTTACCGGCA
>SNPs
-------------------------------------------------S------------------------------
-------------S-S--S----------S-S------------------------------------------------
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----------------------------S------S----------------------S--------------------
-----------------SS-SSSSSSSSSSS------------------------S------S--------------S--
------------------------------------------------------S---------------S---------
----------------------S---------------------------------------------------------
----------S-----------------------------------------------------------S---------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------------S---------------------S---------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------S--SS-----------------------SS------
SSSSS---------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S----------S---------S----S----------------------
----------------------------------------------------------------S---------------
--------------------------------------------S-----------------------------------
----------------------------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
------------------------S---------------------------------------S--------S------
--------------------------------------------------------------------------------
-------------------------------SS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------S----------------------------------------SS-----------------
--S-------------------------------------------S---------------------S---S-------
-----------------------S--S-----S-----------S-----------------------------------
------S---------------S-----S---S-------S---------------------S------S-S--------
S-------S--------------------------------------------------------------S--------
----------
>forward_185
--------------------------------------------------------------------------------
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-----GAAAACCTGCACGCTGCTAC-------------------------------------------------------
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>reverse_1645
--------------------------------------------------------------------------------
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--------------------------------------------TCAACGCAAGCCACTACTGT----------------
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>forward_951
--------------------------------------------------------------------------------
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---------------------------------------------------CACATTCTTGAGCTGTGCCG---------
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>reverse_2920
--------------------------------------------------------------------------------
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---------------------------------------CGGAGGGAGTAGCTTGGTTC---------------------
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