>input_sequence_48774
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---------------------------------------------ATGGTCGTGCCACCCGGCGTGGCCTACAACGCGGC
CATCTCGCGCTGCTCCCGGGCCGGCCTGCACCCGCGCGCGCTCGCCCTGCTCCACGAGATGCGCGCCCGGGGCCTCCACG
CCGACGAGTACACCCTCCCGTCCGCCCTCAACTCCGCCGCGCTCCTCCGGCTCCCCGCCGACGCGCTCCACTCGCTCCTC
CTCCGCGCGGGCCTCGCCGCGCACCTCCACGTCGCCAACGCGCTCGTCGACGCCTACGCCAAGCTGTCCCGCCACGGCGC
CGCGCGGGCCGTGTTCGACGAAATGCCGCGCCGCGACGTGGTCAGCTGGACCTCCCTCCTCACCGGGCTCGCGCGCTCCC
GGTCCCACGACTCGGCCCTGCAGGTCTTCCGCGACATGGTCGCCGCGGGCGTCGGCCCGGACGAGTTCGCCGTCGCGGCC
GCGCTGAGCTCGTGCGCCGGGGCGACGGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCCGCGGTCCGGCTCGCGCTCGA
CCCGTTCCTCTCCGTCGGGAACTCGCTGGTCTCCATGTACGCCAAGACCGGTTCGCTCGGCGAGGCCAAGATGGTCTTCG
ACGCGATGCGGGTCCGGTGCGACCCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGTGGCAGGGAG
TCGCTGGAGATCTACGGCGAGATGGTCCGGTCCGGGTGCCGGCCGGACTACATCACCTTCATCGGGCTGCTCTTCGCGTG
CAGCCACGCCGGCCTGGTCGACGCCGGCCGGGCGCACTTCCGGTCCATGCAGGCCGACCACGGCATCGCGCCCGGGCCGG
ACCACTACGCGTGCATGGTGGACCTGCTCGGCCGCGCCGGGCGGCTCGACGAGGCCATGGACCTGCTGAACCGGAGCACG
ACGAGGCTGGACGCCACGGTCTGGAAGGCGCTGCTGGCCGCGTGCCGGACGCACCGGAACGCGGAGCTCGCCGAGCACGC
GGCGGGCATGGTGTGGAGGCTCGACCCGACGGACGCCGTGCCGTACGTCATGCTGTCGAACCTGTACTCGCGGGCGGGGA
GGTGGGGCGACGTGGCGAGGGTCCGGACGTCGATGAAGGCGAGAGGGATCACCAAGGAGCCCGGGTGCAGCTGGGTCGTG
GCCAACGGCGTGACGCACCTGTTCTACGTGGAGGACCGAGGCCACCCGCGTGCCGCCGAGATCTACCGGAAGGCGGAGGA
GATGACGGAGAGGATCCGCGGCCAAGGGTACGTGGCGGACACCGCCTGGGCGCTGCAGGACGAGGGGCCGGAGGGGAGGG
AGAAGGGCCTGGCGCACCACAGCGAGAGGCTCGCCGTGGCGTTCGGGCTGCTCGCCGTGCCGGCCGGCGCGCCCATCCGC
GTGTTCAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCCAGGCGTACGGCAGGGAGATCGT
ACTGAGGGACGCCAACTGCTTCCATCACATGAAGGATGGCGCGTGCTCGTGCGGCGACTACTGGTAG-------------
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>chr3D_1_TraesCS3D01G400600
AACTGTGCTAACCTGTGGTGCTTGCTTCCATGAAGAGGGGAGGAAGTTGTGGATCTGGTGGCTGATGACTTGTATGTCCT
TCGGTACAAGTCCATCAAGGGCCTTGTCGAGGCTGGTCGAATTGACCTTATTTGATGTGAGCCACAAGGCTTAAACAGAA
GACAAAGGTGCCAGAATCTTCTGGATTCTAAACAGAAGACAAAGGTGCCAGAATCTTCTGAATTCCTTGTAAGGTACTCC
CTCCGTCCCATAATATAGGAGCGTTTTTTACACTAGTGTCGTGTCAAAAACGGTCTTATATTATGGGACAGAGGGAGTAG
AAATGAAGTGGTTCTAATATGTGTACTCTAGAACGACCAGTTATGAGACTGGACTATCTTTGTATGTATCAGTAATTTTT
TTGCTTTGTCTGAATTGTCTCCAACTCATGTTCTTCAAGAATCAAGATTGTTATGTTGTTGATAAGAAGCATTCAGATCA
CCAGTGGTGATCAAAAGCTTTTGCATTGTCTTATCAACTTAAGTTCAGCATCAACCAACCAGCAGAATATTTGCTTTCGG
CAGTGATCTATCTACATACAAACAGAAGTACTTTA---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACATGTATCTGCCTTTGTTGGCCATCCATTGCTG
GCAATGTTGT--------------------------------GTGCAATTCCACTCAACTTTTGAAGCTCAATGTTTGCT
TCGACAAAGGTTTCAGCTGTTTCGCCACAAAATGATGA--------------------TCCCAACGGTCGACAGGATGAA
CAGTGCTGCTGATTTAGAAAGCTGGTCGTGTACAAAAGAATTGCGTTGAATATGTACCGCGCTCAAATGACTGACCCGCC
GCCATTGATAACCATGAAATGAATCGCCATGG-------CGAAGGGTGGCAACTCACGGACGCCGTCAAGGCTCAAGCAA
TCGCAAATCATAAG---CAGCACGCA------------TGACGCGGCAGTCGCCACGCTAGACGCGTTTCCACTGGCACC
CCAACGGGCGGCGCCGAGCTCAGCCCATCGTGCACCCCGGGCACGATGGTCGTGCCACCCGGCGTGGCCTACAACGCGGC
CATCTCGCGCTGCTCCCGGGCCGGCCTGCACCCGCGCGCGCTCGCCCTGCTCCACGAGATGCGCGCCCGGGGCCTCCACG
CCGACGAGTACACCCTCCCGTCCGCCCTCAACTCCGCCGCGCTCCTCCGGCTCCCCGCCGACGCGCTCCACTCGCTCCTC
CTCCGCGCGGGCCTCGCCGCGCACCTCCACGTCGCCAACGCGCTCGTCGACGCCTACGCCAAGCTGTCCCGCCACGGCGC
CGCGCGGGCCGTGTTCGACGAAATGCCGCGCCGCGACGTGGTCAGCTGGACCTCCCTCCTCACCGGGCTCGCGCGCTCCC
GGTCCCACGACTCGGCCCTGCAGGTCTTCCGCGACATGGTCGCCGCGGGCGTCGGCCCGGACGAGTTCGCCGTCGCGGCC
GCGCTGAGCTCGTGCGCCGGGGCGACGGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCCGCGGTCCGGCTCGCGCTCGA
CCCGTTCCTCTCCGTCGGGAACTCGCTGGTCTCCATGTACGCCAAGACCGGTTCGCTCGGCGAGGCCAAGATGGTCTTCG
ACGCGATGCGGGTCCGGTGCGACCCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGTGGCAGGGAG
TCGCTGGAGATCTACGGCGAGATGGTCCGGTCCGGGTGCCGGCCGGACTACATCACCTTCATCGGGCTGCTCTTCGCGTG
CAGCCACGCCGGCCTGGTCGACGCCGGCCGGGCGCACTTCCGGTCCATGCAGGCCGACCACGGCATCGCGCCCGGGCCGG
ACCACTACGCGTGCATGGTGGACCTGCTCGGCCGCGCCGGGCGGCTCGACGAGGCCATGGACCTGCTGAACCGGAGCACG
ACGAGGCTGGACGCCACGGTCTGGAAGGCGCTGCTGGCCGCGTGCCGGACGCACCGGAACGCGGAGCTCGCCGAGCACGC
GGCGGGCATGGTGTGGAGGCTCGACCCGACGGACGCCGTGCCGTACGTCATGCTGTCGAACCTGTACTCGCGGGCGGGGA
GGTGGGGCGACGTGGCGAGGGTCCGGACGTCGATGAAGGCGAGAGGGATCACCAAGGAGCCCGGGTGCAGCTGGGTCGTG
GCCAACGGCGTGACGCACCTGTTCTACGTGGAGGACCGAGGCCACCCGCGTGCCGCCGAGATCTACCGGAAGGCGGAGGA
GATGACGGAGAGGATCCGCGGCCAAGGGTACGTGGCGGACACCGCCTGGGCGCTGCAGGACGAGGGGCCGGAGGGGAGGG
AGAAGGGCCTGGCGCACCACAGCGAGAGGCTCGCCGTGGCGTTCGGGCTGCTCGCCGTGCCGGCCGGCGCGCCCATCCGC
GTGTTCAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCCAGGCGTACGGCAGGGAGATCGT
ACTGAGGGACGCCAACTGCTTCCATCACATGAAGGATGGCGCGTGCTCGTGCGGCGACTACTGGTAGGTAGGTTCAGCCG
GTCCGCCGATGAGCTTCAAGTCGAGCATGAGCTAGCGC--GCCATGGGCAGCAGTGGCGGCCACTTTTTCGTCGACACCT
GCATTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TTTACAGCACACCACACCACACCACACCACATAC---ACATCATGATGAACTAAGCATGAAAC
TTAGCATGCAACTAATCA-AGTACTCCATGCTTGTACTCCCTCGGTGTTAAAAACGTTCTTATATTTTAGGACAGAGGGA
GTAGTATATATATTGCATGCATGTGTGTATCCTCCATCCTCTTGCAACCGGAGTTTCCAGAAGGGAATATATCTCCGGTA
AGGCAAGAACAGCACAGTACCGATCATGATCAAGACCCGAGAAAGAGGCCCCGAAAGCAGGGTATTGTAACAACATGCAA
CTGCATCCCTCACGTACACGCATTGCCATTTCTGTTTAGATCGTGGTCGACATAATCAGATAAAAGAGAAAAAAAAAAAC
TCTCCCAACGAATTTCTTTTGGAGATTGTAAATTCATCGAAGCAAAGAACCGGACGATGCTCGCTTTGCTCATCAAGCAC
TCTGTGCCCAGGCTTCTCCTCCCCTCGT-----GCAGCCGCTATATACGTGCGCACTCACGCGAGTCTCTATGGGCATGT
TTGGTTACATTGCCGATTCAGCCTGACCCGGCGAGTCTGGCTTTATTGAGCCGGTTTGAGGGGATGCAGGCCAAAAAACT
CCAGATGCACATAGTTTGGTTGCCTGCATGCTCCTAGTTGCATGAGACAAACATTTTTGATCCAGCATTTGGTTGCCCGC
ATTGCATTAGGTGCACATATGACATGGTGTTTGGTTGCAACCTGCATAAGGTGTTGTCACCACTTCTATCTAGTGGTGAC
CTTACCACACACAATCTGAACACAGTGCCAGCTAGTTAAACAAATGACAGTTCATCCTAACTACAATCAAATGACAGATC
AAATTATTAAGAGCCATTGGCTAAATAGGGGATAGTTCATCGGTGTTGC
>chr3B_1
AACTGTGCTAACCTGTGATGCTTGCTTCCATGAAGAGGGGAGGAAGTTGTGGATCTGGTTGCTGATGACCTGTATGTCCT
TCGGTACAAGTCCATCAAGGGCCTTGTCGAGGCTGGCCGAATTGACCTTATTTGATGTGAGC--CAAGGCTTAAACAGAA
GACAAAGGTGCCAGAATCTTCTGAATTCTAAACAGAAGACAAAGGTGCCAGAATCTTCTGAATTCCTTGTAAGGTACTCC
CTCCGTCCCATAATATAGGAGCGTTTTCGACACTAGTGTAATGTGAAAAACGGTCTTATATTATGGTACAGAGGGAGTAG
GAATGAAGTGGTTCTAATATGTGTACTCTAGAACGACCAGTGATGAGATTGGACTATCTTTATATGTATCAATA--TTTT
TTGCTTTGTCTGAATTGTCTCCAACTCATGTTCTTCAAGAATCAAGATTGTTATGTTGTTGATAAGAAGCATTCAGATCA
CCAGTGGTGATCAAAAGCTTTTGCGTTGTCTTAACAACTTAAGTTCGGCATCAACCAACCAGCAGAATATTTGCTTTCGG
CAGTGATCTGTCTACATACAAACATAAGTACTTGACA-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGTTGGCGAGCCATTGCTG
GCAATGTTGT--------------------------------GTGCAATCCCACTCAACTTTTGAAGCTCAATGTTTGCT
TCGACAAAGGCTTCAGCTGTTTTGCCACAAAATGATGACCCCAAGTC------------CCCAACGGTCGACAGGATGAA
CCGTGCTGCTGATTTAGAACGCTGGTCGTGTACAAAAGAATTCCGTTGAATATGTACCGCGATCAAACTACTGACCTGCC
GCCATTGATAACCATGAAATGGCTTGCGATGGCGAAGGCCGAAGGGCAGCAACTCGCCGACGCCGTCGAGGCTCAAGCAA
TCGCATATCATAAG---CAGCACGCACTGATGCGCACATGACGCGGCAGTCGCCACGCTAGACGCGTTTCCACTGGCACC
CGAACCGGC--CGCCGAGCTCGGTCCGTCGTGCACCCGGCGGCA-ATGGTCGTGCCCCCCGGCGTGGCCTACAACGCGGC
CATCTCCCGCTGCTCCCGGGCCGGCCTGCACCAGCGCGCGATCGCCCTGCTCCACGAGATGTGCGCCCGGGGCCACCACG
CCGACGAGTACACCCTCCCGCCCGCCCTCAACTCCGCCGCGCTCCTCCGGCTCCCCGCCGACGCGCTCCATTGCCTCCTC
CTCCGCGCGGGCCTCGCCGCGCACCTCCACGTCGCCAACGCGCTCGTCGACGCCTACGCCAAGCTGTCCCGCCACGGCGC
CGCGTGGGCCGTGTTCGACGAAATGCCGCGCCGCGACGTGGTCACCTGGACCTCCCTCCTCACGGGGCTCGCGCGCTCCC
GGTCCCACGACTCGGCCCTGCGGGTCTACCGCGACATGGTCTCCGCGGGCGTCGGCCCGGACGAGTTCGCCGTCGCGGCC
GCGCTGAGCTCGTGCGCCGGCGCGACGGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCCGCGGTCCGGCTCGCGCTCGA
CCCGTTCCTCTCCGTCGGGAACTCGCTGGTCTCCATGTACGCCAAGACCGGCTCGCTCGGCGCGGCCAAGAAGGTGTTTG
ACGCGATGCGGGTCCGGTGCGACACCATCACGTGGACGGCGCTAATCGTCGGGTACGCGCAGAACGGCCGGGGCAAGGAG
TCGCTCGAGATCTACGGCGAGATGGTCCGGTCCGGGTGCCGGCCGGACTACATCACCTTCATCGGCCTTCTCTTTGCGTG
CAGCCACGCCGGCCTGGTCGACGCCGGCCGGGCGCACTTCCGGTCCATGCAGGCCGACCACGGCATCGCGCCCGGGCCGG
ACCACTACGCGTGCATGGTGGACCTGCTTGGCCGCGCCGGGCGGCTCGACGAGGCCATGGACCTGCTGAACCGGAGCACG
ACGAGGCTGGACGCCACGGTCTGGAAGGCGCTGCTGGCCGCGTGCCGGACGCACCGGAACGCCGAGCTCGCGGAGCACGC
GGCGCGCATGATCTGGAGGCTCGACCCGACGGACGCCGTGCCGTACGTCATGCTGTCGAACCTGTACTCGCGGGCGGGGA
GGTGGGGCGACGTGGCGAGGGTCCGGACGTCGATGAAGGCGAGAGGGATCACCAAGGAGCCCGGCTGCAGCTGGGTCGCG
GCGAACGGCGTGACACACCTGTTCTACGTGGAGGACCGAGGCCACCCGCGTGCCGCCGAGATCTACCGGAAGGTGGAGGA
GATGACGGAGAGGATCCGCGGCGAAGGGTACGTGGCGGACACGGCGTGGGCGCTGCAGGACGAGGGGCCGGAGGGGAGGG
AGAAGGGCCTGGCGCACCACAGCGAGAGGCTCGCCGTGGCGTTCGGGCTGCTCGCCGTGCCGGCCGGCGCGCCCATTCGC
GTGTTCAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATGAAGATGGTCGCCCAGGCGTACGGCAGGGAGATCGT
ACTGAGGGACGCCAACTGCTTCCATCACATGAAGGATGGCGCGTGCTCGTGTGGTGACTACTGGTAGGTTCCGCCAGCCG
GTCCACCGGTAAGCTTCAAGTCGAGCA-GAGCTAGCGC--GACATGGACAGCAGTGGCGGCCACTTTTTCGTCGACACCT
CCATTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTTACAGCACACCACATCACA----------TACTACACATTATGATGAACTAAGCATGAAAC
TTAGCATGCAACTAATCAAAGTGCTCCATGCTTGTATATTATGAG-----------------------------------
----------------ATGCATGTATGTATCCTCCATCCTCTTGCAACCGTAGTTTCCAGAAGGGAATATATCTCCGGTA
AGGCAAGAACAGTACAGTACCGATCATGATCAAGACCCGAGAAAGAGGCCCCGAAAGCAGGGTATTGTAACAACATGCAA
CTGCGTCCCTCACGTACACGCATTGCCATTTCTGTTTAGACCGTGGTCGACACAATCAGATAAAGGAGAAAAAAAAAACA
-CTCCCAACGAATTTCTTTTGAAATTTGTAAATTCATCGAAGCAAAGAACCGGACGATGCTCGCTTTGCTCGTCAAGCAC
TCTGCCCGGACTT-----CTCGCCTTCCCACGCGCAGCCGCTATATAC-TGCGCGCTCA--CGAGTCTCTAT--------
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>chr3A_1
AACTGTGCTAACCTGTGGTGCTTGCTTCCATGAAGAGGGGAGGAAGTTGTGGATTTGGTTGCTGACGACCTGTATGTCCT
TCGGTACAAGTCCATCAAGGGCCTTGTCGAGGCCGGCCGAATTGACCTTATTTGATGTGAGC--CACAAGGCAGTATCAA
ACAGATTATCAATCCTCA--------------------------GTGCCAAAATCTTCTGAATTCCTGGTAAGGTA----
-------------------------------------------------------------------------------G
AAATGAAGCGGTTCAAATGTGTGTACTCCAGAATGAATTCCGTTAGGAGAACAGACCG--TGTATGTATCAGTA--TTTT
TTGCTTTGTCTGAATTGTCTCCAACTCATGTTCTTC-------AAGATTGTTATGTTGTTGATAAGG----------TCA
CCAGTTATCTCCAAAAGATTTTTCATTGTCTG-ACAACTTAAGTTCAGCATCAACCAACCAGCTGAATATTTGCTTTCGG
CAGTGATCTATCTACATAGAAGGGGAGCCTTGGCGCAACGGTAAAGCTGTTGCCTTGTGACCATCAGGTCACGAGTTTGA
GTTCTGGAAGCAGCCTCTAACAGAAATGTAGGGAAAGACTGCCTACTATAGATCCAAAGTGGTTAGACCCTTTCCTGGAC
CCTGCGCAATACATACAAACAGAAGAAAGGAGACCAATTGCATTGGACATGTATCTGCCTTTGTTGGCGATCCATTGCTG
GCAATGCTGTATGGTGGTCATTTAAAACTAGAGATCCCAATGGTGCAACTCCACCAAACTTTTGAAGCTCAATATTTGCT
TTGACAAAAGTTTTAGCCGTTTCGCCATAAAATGATGATCCCGTGATGATTGATGAATTCCCAACGATCGGCAGGATGAA
CCGTGCTGCTGATTTAGAGCGCTGGTCGTGTACAAAAGAATTCCGTTGAATATGTGCCGCGATCAAAGTACTGACCCGCC
GCCATGGCTGAGATGGCTCGCCGA------------------------------CGCCGACGCCGTGAACGCTCGAGCAA
TCGCATATCAGAAGCAGCAGCACGCACTGATGCACACATGACGCGGCAGTCGCCACGCTAGACGCCGAACCGACT-----
-------------CCGAGCTCAGCCCGTCGTGCACCCGGCGGCA-ATGGTCGTGCCGGCCGGCGTGGCCTACAACGCGGC
CATCTCCCGCTGCTCCCGGGCCGGCCTGCACCCGCGCGCGCTCGCGCTGCTCCACGAGATGCGCGCCCGGGGCCACCACG
CCGACGAGTACACCCTGCCGCCCGCCCTCAACTCCGCCGCGCTCCTCCGGCTCCCCGCCGACGCGCTCCACTGCCTCCTC
CTCCGCGCGGGCCTCGCCGCGCACCTCCACGTCGCCAACGCGCTCGTCGACGCCTACGCCAAGCTGTCCCGCCACGGCGC
CGCGCGGGCCGTGTTCGACGAAATGCCGCGCCGCGACGTGGTCACCTGGACCTCCCTCCTCACGGGGCTCGCGCGCTCCC
GCTCCCACGACCCGGCCCTGCGGGTCTACCGCGACATGGTCGCCGCGGGCGTCGGCCCGGACGAGTTCGCCGTCGCGGCC
GCGCTGAGCTCGTGCGCCGGGGCGACGGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCCGCGATCCGGCTCGCGCTCGA
CCCGTTCCTCTCCGTCGGGAACTCGCTGGTCTCCATGTACGCCAAGACCGGCTCGCTCGGCGAGGCCAAGAGGGTCTTCG
ACGCGATGCGGGTCCGGTGCGACCCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAG
TCGCTGGAGATCTACGCGGAGATGGTCCGGTCCGGGTGCCGGCCGGACTACGTGACCTTCATCGGCCTTCTCTTCGCGTG
CAGCCACGCCGGCCTGGTCGACGCCGGCCGGGCGCACTTCCGGTCCATGCAGGCCGACCACGGCATCGCGCCCGGGCCGG
ACCACTACGCGTGCATGGTGGACCTGCTCGGCCGCGCCGGGCGGCTCGACGAGGCCATGGACCTGCTGAACCGGAGCACG
ACGAGGCTGGACGCCACGGTCTGGAAGGCGCTGCTGGCCGCGTGCCGGACGCACCGGAACGCCGAGCTCGCCGAGCACGC
CGCCGGGATGGTCTGGAGGCTCGACCCCACGGACGCCGTGCCGTACGTCATGCTGTCGAACCTGTACTCGCGGGCGGGGA
GGTGGGGCGACGTGGCGAGGGTCCGGACGTCGATGAAGGCGAGAGGGATCACCAAGGAGCCCGGCTGCAGCTGGGTGGCG
GCGAACGGCGTGACGCACCTGTTCTACGTGGAGGACCGAGGCCACCCGCGGGCGGCCGAGATCTACCGGAAGGTGGAGGA
GATGACGGAGAGGATCCGCGGCCAAGGGTACGTGGCGGACACCGCCTGGGCGCTGCAGGACGAGGGGCCGGAGGGGAGGG
AGAAGGGCCTGGCGCACCACAGCGAGAGGCTCGCCGTCGCGTTCGGGCTGCTCGCCGTGCCCGCCGGCGCGCCCATCCGC
GTGTTCAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCCAGGCGTACGGCAGGGAGATCGT
GCTGAGGGACGCCAACTGCTTCCATCACATGAAGGATGGCGCGTGCTCGTGCGGCGACTACTGGTAGGTAGGTTCAGCCG
GTGCACCGATAAGCTTCAAGTCGAGCATGAGCTAGCGCCAGCCATGGACAGCAGTGGCGGCCTCTTTTTCGTTGACACCT
GCATTGTTTACAGTGGCGTAGCCACATCAGAGCCACGCCCCGGACCAAGCTCGTCGCTACAGTAACAAACAGTACTAAAC
AGTTCTACTGAAGCATCAAGCTGCTAACCTGGGGCCTAGCTACGCCGCTAGAGAATTGTCTCGTTAAATTGACCCGCGTA
TAATATCTTGTTAATAGCATGCTATAGCGTGTTATAACACGCTAAGCATATTTTCAGGGGCGGCGTTATTTTGTATAGCG
TGTTGTTTTTTTCCTTGTTTACAGCACACCACATCACA----------TAC---ACATTATGATGAACTAAACATGGAAC
TTAGCATGCAACTAATCA-AGTACTCCATGCTTGTATATGTACTTCCTTTGTACCGTAATATAGGTCTCTGGAGTAGCTG
AGTATGATGT----------ATGTATGTATCCTTCATCCTCTTGCAACCGTAGTTTCCAGATGGGAATATATCTCCGTTA
AGGCAAGAACAGTACAGTACCGATCA-------------AGAAAGAGGCCCCGAAAGCAGGGTATTGTAACAACATGCAA
CTGCATCCCTCACGTACACGCATTGCCATTTCTGTTTAGATCATGGTCGACACAATCAAATAAAAGAGAAAAAAA----C
TCTCCCAACGAATTTCTTTTAGAGATTGTAAATTCATCGAAGCAAATAACCGGATGTTGCTCACTTTGCTTATCAAGCAC
TCTGTGCCCAGGCTTCTCCTCGCCTCGCCTCCCGCAGCCACTATATAC-TGCACGCTCACGCGAGTCTCTAT--------
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>SNPs
-----------------------------------------------------------S---------S----------
------------------------------------S-------------------------SS----------------
-----------------------S--------------------------------------------------------
---------------------------SS----------SS---S---------------------S-------------
-----------------------------------------S------S-------------------------SS----
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
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-S-----------------S----------------------S------------------S-----SS-----------
---------------------SS-S--S------------------SS-------S-S----------------------
-----S--------------------------------------------------------------------------
-S---S---SS---------------S----------S-S-SSSS-----------S-----------------------
------S-------------------------------------------------------------------S-----
--------------------S---------------------------------------------------SS------
--------------------------------------------------------------------------------
--------------------------------------------S------------------S----------------
---------------------S-----S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------------S--------
----------------------------------------------------------------------S---------
-----------------------------------------------------------------S--S-----------
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--------------------------------------------------------------S-----------------
------------S-------------------------------------------------------------------
----------------------------------------------------------------S-------------S-
--S----------------------------------------------------------------------S------
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----S-----S------------------------------------S--------------------------------
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---------------------------------S----SSSSSSSSSS----------S---------------------
------------------------------------SSSSS--S-SS--SSS-S---SS-SSSSS-S-SS-SSSS--SSS
SSSS-SSSSSSSSSSS--------S-------------------------S-----------------------------
------------S-------------------------------------------------------------------
----------------------------------------------------S-------------------------S-
--------------------------------------------------------------------------------
---------------------S-----S--------------------S-----S-----------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1126
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------------------------------------------------------------------CAAGGCTCAAGCAA
TCGCAA--------------------------------------------------------------------------
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>reverse_2805
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----GCCGATGAGCTTCAAGTCGA--------------------------------------------------------
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