>input_sequence_48750
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----------------------------------------------------------------------ATGAACAAAA
TCGCGTCGCGAAAACGAAAACGAAGCGGTCAACCGAAGCTTTGG-------------TTTGCATGGATACGCGCCAATGA
TACCCCGGACATCACCATTAAACAAAGAGAGA--------------------------------ACATACGATGCACTTG
CTCACCACCAACGAACACCCAAAGAATAACAAGAGAGGTCCCGGAGAGGAGAAGAGCGCCGGCCGGCTATATAAACCGGA
TTAAACGCACGGCAGGACATATACTAGAGCACAAAACACAAGGAAAGCAAGCAACATTCCATTCCATTACCTGCCGAGGT
CCCATTGTTATGGCGATGATGATGGGGCGGTCGACGGCGGCGGCGGTCCTCCTGGCGCTGGTGGTCGTGGCGTCGCCGAT
GCTGCTGGCGGCGTCGCAGCCCCTGGGGGCGCCT---------------------------GCGACGAACAACTCGCGGC
TGGAGAAGGCGTACGTGGCGCTGCAGGCGCTGAAGAAGGCCATCACGGACGACCCCAAGAACATGACCAAGAACTGGTGC
GGCCCCGACGTGTGCAGCCACCACGGCGTCTACTGCGCGACGGCGCCCGACGACCCGTGCGCGCGCACCGTGGCCTCCGT
GGACCTCAACCACGGCGACCTGGCCGGCACGCTGCCGGAGGAGCTGGGCCTGCTCTCCGACCTTGCCGTCTTCCACCTCA
ACTCCAACCGCTTCTGCGGCGCGCTGCCCGACGCCCTCCGCTCCCTCCACCTCCTCCACGAGATCGACGTCAGCAACAAC
CAGCTCACCGGCAACTTCCCCTCGCAGCTCCTCTGCCTCCCCAACGTCCAGTACGTCGACATCAGGTACGCACG------
---CATCATCATCATCATCATCATCTGTACCTCCCGTCCTGCGCCGCACTTCACAGAGGTTTAACAACTGGCTGTCTGTC
CGTCCATGGCGTCTCTCAAGGTTTAACAACTTCTGCGGCGAGGTGCCGGCGGCCATCTTCGAGAAGAAGATCGACGCGCT
CTTCATCAACAACAACAACTTCGAGTTCACGCTGCCGGCCAACTTCAGCAGCTCCACGGCGTCCGTGATCGTGCTGGCCA
ACCTGCCGCGGGTCGGGGGGTGCCTGCCCAGCAGCATCGGCGACATGGCCGGGACGCTCAACGAGCTGATCCTCCTCAAC
AGCGGCATCTCCTCCTGCATCCCGCCCGAGATCGGCAAGCTGGACAAGCTCACCGTGCTCGACCTCAGCTCCAACGGCAT
CGTCGGCAAGCTCCCGGACACCATCGGCAACATGCGCGCCCTCGAGCAGCTCAACGTCGCGAACAACATGCTCGCCGGCG
AGATCCCCGAGAGCATCTGCGCGCTGCCAAACCTCAAGAACTTCACCTACTCCCACAACTTCTTCTGCGGCGAGCCGCAC
CGGTGCCTCGAGGTGCCCCACATCGACGACCGGCAGAACTGCATCGCCGGGCGCCCCGACCAGCGGCCTGGCGAGCAGTG
CATCGAGTTCCTCCACCGGCCGCCGGCACAGTGTGCCGCGCACGGGCAATCATCGCCACCGCCGATGTATGCGCCTCCAC
CGCCGATGTACTGA------------------------------------------------------------------
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------------------------------------------------------------------
>chr5B_1_TraesCS5B01G439200
TCGAATTCAGTTATCGATATACGTTTTCAGACGAACCCGTATGTCAATGGAAGAACTAGAGGAATTTGTCCTGGCTAGGG
TGGAATTAAAGGTGCCTTTCAT---AGGAAAAAAGGTTAGGATAACAGATATTATATG----CCTATCAGA---AGTAGA
CTCCTAACAGTGGCTTAAAATGGTGACCACCGCCACCGAATAGTGAATGCGAGACGAAAA-GGCTGGACAAGTTGCGCCT
CTGCACTATGCCAAAGCCAAACAGGAAGAATCGATGAAGCCTCCATCGTCAACATTCGTGCAGGCCACACATATAATTTC
TCGGTGGTTTGTGCTGATTGGGTGGCGAAAGAAGATTCAAAGCATATTATACATAAGCACAAGAGCCAAAGAAGATTCGA
TAAAAGGAACAGCTCGAGAGGCCGACAAACACGGGGAATAACTAGAGCCAAAGGCATACCTCTCTTTCTCGCATGTTAAG
TT-AAAGGAAAGGATCATATATAATAGAAGTAGTAGCG------ATACTTTC----------------------------
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--------------------------------------------------------------CCTGGGCAGGTCATCATT
TGATTCAGCACTAAAAGAACATGATTAGTACATATAATCAAGACCGGCG--------------------AGATAGATATA
TCAACATCATTGCAAGGAAATGACGTTGTGAATTGGTGAGGATTTCCATTAACAAACACGATGGGCCATAAGCGAGAGGA
A---------------------------------------------TTAATGAATGAAGCTGAGCAATAGCAGACAAAGA
GTTTTATGAGCAATAAGGAAACGCAGAACTCCATAAAGAGAAGGCATCTTACCAACGTGCATTC------CACCAATAAC
AAATGCAAAATTAATAATTTATCTGTATGCTCTGTTGGCGCCACTAACTCTGAAGAAAACGGTCAGTGGGATATTTTGTC
ACTGAGTGCAGGCATCA----GTC----TTTGACCGTGTCCTCAGGGCCAGGGAGTCGGGCACAAAGGCACACGGCAGCC
AAA-GTCAATTTGCTAGGCAGGAAAAAACACGGACGATCACCCAGCACCCACTC--CCAAAATCCGCGGTATGAACAAAA
TCGCGTCGCGAAAACGAAAACGAAGCGGTCAACCGAAGCTTTGG-------------TTTGCATGGATACGCGCCAATGA
TACCCCGGACATCACCATTAAACAAAGAGAGA--------------------------------ACATACGATGCACTTG
CTCACCACCAACGAACACCCAAAGAATAACAAGAGAGGTCCCGGAGAGGAGAAGAGCGCCGGCCGGCTATATAAACCGGA
TTAAACGCACGGCAGGACATATACTAGAGCACAAAACACAAGGAAAGCAAGCAACATTCCATTCCATTACCTGCCGAGGT
CCCATTGTTATGGCGATGATGATGGGGCGGTCGACGGCGGCGGCGGTCCTCCTGGCGCTGGTGGTCGTGGCGTCGCCGAT
GCTGCTGGCGGCGTCGCAGCCCCTGGGGGCGCCT---------------------------GCGACGAACAACTCGCGGC
TGGAGAAGGCGTACGTGGCGCTGCAGGCGCTGAAGAAGGCCATCACGGACGACCCCAAGAACATGACCAAGAACTGGTGC
GGCCCCGACGTGTGCAGCCACCACGGCGTCTACTGCGCGACGGCGCCCGACGACCCGTGCGCGCGCACCGTGGCCTCCGT
GGACCTCAACCACGGCGACCTGGCCGGCACGCTGCCGGAGGAGCTGGGCCTGCTCTCCGACCTTGCCGTCTTCCACCTCA
ACTCCAACCGCTTCTGCGGCGCGCTGCCCGACGCCCTCCGCTCCCTCCACCTCCTCCACGAGATCGACGTCAGCAACAAC
CAGCTCACCGGCAACTTCCCCTCGCAGCTCCTCTGCCTCCCCAACGTCCAGTACGTCGACATCAGGTACGCACG------
---CATCATCATCATCATCATCATCTGTACCTCCCGTCCTGCGCCGCACTTCACAGAGGTTTAACAACTGGCTGTCTGTC
CGTCCATGGCGTCTCTCAAGGTTTAACAACTTCTGCGGCGAGGTGCCGGCGGCCATCTTCGAGAAGAAGATCGACGCGCT
CTTCATCAACAACAACAACTTCGAGTTCACGCTGCCGGCCAACTTCAGCAGCTCCACGGCGTCCGTGATCGTGCTGGCCA
ACCTGCCGCGGGTCGGGGGGTGCCTGCCCAGCAGCATCGGCGACATGGCCGGGACGCTCAACGAGCTGATCCTCCTCAAC
AGCGGCATCTCCTCCTGCATCCCGCCCGAGATCGGCAAGCTGGACAAGCTCACCGTGCTCGACCTCAGCTCCAACGGCAT
CGTCGGCAAGCTCCCGGACACCATCGGCAACATGCGCGCCCTCGAGCAGCTCAACGTCGCGAACAACATGCTCGCCGGCG
AGATCCCCGAGAGCATCTGCGCGCTGCCAAACCTCAAGAACTTCACCTACTCCCACAACTTCTTCTGCGGCGAGCCGCAC
CGGTGCCTCGAGGTGCCCCACATCGACGACCGGCAGAACTGCATCGCCGGGCGCCCCGACCAGCGGCCTGGCGAGCAGTG
CATCGAGTTCCTCCACCGGCCGCCGGCACAGTGTGCCGCGCACGGGCAATCATCGCCACCGCCGATGTATGCGCCTCCAC
CGCCGATGTACTGATACGTGGCAGACGGCAATACTGCAATTTGTAACTGTTTGCTGCCTTTGTGCCGTGAGAAAGGGTAA
AAATGCACACATTTGGTATATACTGTAATCTTTATTTTTCGGAAACAAA-GAAATAACAATGGATTAATAGATTTGCGTT
ATAGAACTCAACTGAAAGGCAAAGAATCATTTCAGTGTTCTTTACCTGTTCCTTCCTCATTCCAAGAAACAATTGTT---
-----TACTAGTCCTACATAATCATACGAAAATGGAAATAATGCGCTAATTTGGCGGTGTGGCTTCTGCAAAAACTTGGT
GTAGTTATTAGTTGGATCGATCTGGGATGCAGTTAGTTGAGGGGCCATGCTATGTCAGAATTCAGTTCAGAATTAGTTGC
TAGGACTTGGGACCACTGCTAAAAGTGGGAAAAGAGGGAGTGTATCACTGTTTTTCTCTGTAAAGGTTTAAAAGACGACT
GTTCGGCTAAATTAGTTAACCTAAAGTGTTAAACATATGAACCCTGGAGATTTATAAAAAGTACATAATACCATGCCATC
TGGCAGCTCGGATATCAAACACTGCCAAAGAGCTCCATTTCAAAAGGATATGGATGTCCTTGTCGAAAAAGGAAGCTACA
AAAACAGAGGACGAAGCAAGTAAT-GG-AAAAAACATAGACAATAAAGTAAGTAAGGTTCTAGCTAGGGTACCACCAAAT
TATGAACAGTAATGGCACAAACGCATTTGACAACGATTGGTCAGAGAGGAATTAATAAAAAGCGAGTACC-GTTCATGGG
TTCCAGCTGCAAAGAGGGGTTTCTTTTACTCGTTGGTTGATCAACTCAAAGGGCAAGAAGCTTCTTCTACCCTTCATCTT
TGCTGGCTCCAGGCAGGCCGGGGTTCCTTTCCGCAATCCACTCGAACAAGACGGCTTCATGGTTTCACCCAACCGATGTG
AATTTTGCAGCTTGACCTTGTCACACACAGCAACACACTAAGCTCAGACAACTGAAAGATTACGGT
>chr5A_26
-------------------------TTCGGACGAACCCAAATGTCAATGGAAGAAGTAGAAGAATTTGTCCTAGCTAGGG
TGGAACAAAAGATGCTTTTCATCACAGGAAAAAAGGTTAGGATAACAGATATTATATG----CCTATCAGAAGTAGTAGA
CTCCTAACAGTAGCTTCAAATGATGACCACCGGCACCGAATAGTGAATGCAAGACGAAAA-GGCCAACAAAGTTGCGCCT
CTGCACTATG------GCAAACAGGAAGAATCG-----------ATCGTCAACATTCGTGCAGGCCACACATAATT----
TCGGTGGTTTGTGCTGATTGGGTGGCGAAAG-----------CATATTATACATAAGCACAAGAGCCAAAGAAGATTCGA
TAAAA-------------AGGCCGACAAACACGGGGAATAACCAGAGCCAAAGGCATATCTCTCTTTCTCGCATGTTAAG
TT-AAAGGAAAGGATCATGTGTAGAGTAGTACAGTATAAAACTAATACTTTG----------------------------
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--------------------------------------------------------------CCGGGGCAGGTCATCATT
TGATCCAGCACTAAAAGAACATGATTAGCACACATAATCAAGACCGGCGAGATAGATAGATAGATAGATAGATAGATATA
TCAACATCATTGCAAGGAAATGGCGTTGTGAATGGGTGAGGATTTCCATTAACAAACACGATGCAACCGTGCGAGATAAA
TAAGAATCTAAATCAGAAGGCAAGTTGGGGCCAGAAGTGAGCGCAGTTAATGAATGAAGCTAAGCAATAGAAGACAGAGA
GTTTTA--------AAGGAAATGCAAAACTTCATAAAGACAAGGCATCTTACTATGTGCACTAATTTCATCACCAATAAC
AGATGCATAATAC----TTTATGTGTGTGCTCTGTTGGTGCCACTAACTCTGAAGAACACCGTCAGTGGG--ATTTTGTC
ACTGAGTGCAGGCATCA----GTCAGTCTTTGACCGTGTCCTCAGGGCCAAGGAGTCGAACACAAAGGCACACGACAGCC
AAAAGTCAATTTGCTAGGCAGGAAAAAAGACGGACGATCACCCATCACCCACTCCGCCAAAATCCGCAGTATGAACAAAA
TCGCGTCGCGAAAACGAAAACGAAGCGGTCAACCGAAGCTTTAG-------------TTT---TGGATGCGCGCCAATGA
TA-CCCGGACATCATCATTAAACAAAGAGAGATAGAGAGAGAGAAAGAAAGCGGA----CATGAACAAACGATGCA----
CTCGCCGCCAACGAACACCCAAGGAATAATAAGAG-------------GAGCAAGGCGCCGGCCGGCTATATAAGCCGAA
TTGAACGCACGGCAGGACATATGCTACAACACAAACCCCAAGAAAAGAAGCAGCAGA--CATTCCATTACCT--------
---------ATGGCGATGATGGGGTCGA---------CGGCGGCGGTGCTCCTGGCGCTGGTGGTCGTGGCGTCGCCGCT
GCTGCTGGCGGCGTCGCAGCCGGTGGGGGCGCCGC---------------CCGCGGCGCCGGCGACCAACAACTCGCGGC
TGGAGAAGGCGTACGTGGCGCTGCAGGCGCTGAAGAAGGCCATCACGGACGACCCCAAGAACCTGACCAAGAACTGGTGC
GGCCCCGACGTGTGCAGCTACTACGGCGTCTACTGCGCGACGGCGCCCGACGATCCCTGCGCGCGCACCGTGGCCTCCGT
GGACCTCAATCACGGCGACCTGGCCGGCACGCTGCCGGAGGAGCTGGGCCTGCTCTCCGACCTCGCCGTCTTCCACCTCA
ACTCCAACCGCTTCTGCGGCGCGCTGCCCGACGCCCTCCGCTCCCTCCACCTCCTCCACGAGATCGACGTCAGCAACAAC
CAGCTCACCGGCAACTTCCCCTCCCAGTTCCTCTGCCTCCCCAACGTCCAGTACGTCGACATCAGGTACGCACGCATCAT
CATCATCATCATCATCATCATCATCTGTACCTCCGGTCCTGCGCCGCACTTCACAGAGGTTTAACAACTGGCTGTCTGTC
TGTCCATGGCGTCTCTCAAGGTTTAACAACTTCTGCGGCGAGGTGCCGGCGGCCATCTTCGAGAAGAAGATCGATGCGCT
CTTCATCAACAACAACAACTTCGAGTTCACGCTGCCGGCCAACTTCAGCAGCTCCACGGCGTCGGTGATCGTGCTGGCCA
ACCTGCCGCGGGTCGGGGGGTGCCTGCCCAGCAGCATCGGCGACATGGCCGGGACGCTCAACGAGCTGATCCTCCTCAAC
AGCGGCATCTCCTCCTGCATCCCGCCGGAGATCGGCAAGCTGGACAAGCTCACCGTGCTCGACCTCAGCTCCAACGGCAT
CGTCGGCAAGCTGCCCGACACCATCGGCAATATGCATGCCCTCGAGCAGCTCAACGTCGCCAACAACATGCTTGCCGGCG
AGATCCCCGAGAGCATCTGCGCGCTGCCAAACCTCAAGAACTTCACCTACTCCCACAACTTCTTCTGCGGCGAGCCGCAC
CGGTGCCTGGAGGTGCCCCACATCGACGACCGGCAGAACTGCATCGCAGGTCGCCCCGACCAGCGGCCCGGCGAGCAGTG
CATCGAGTTCCTCCACCGGCCGCCGGCCCAGTGTGCCGCGCACGGGCAATCGTCGCCACCGCCGATGT------------
---------ACTGATACGTGGCAGACGGCAATACTGCAATTTGTAACTGTTTGCTGCCTTTGTGCCGTGAGAAAGGATAA
AAATGTACACATTTGGTATATACTGTAATCTTTATTTTTCGGAAACAA--GAAATAACAATGGATTGATAGATTTGCGTT
ACAGAACTCAACTGAAAGGCAAAGAATCATTTCAGTGTTCTTTACCTGTTCCTTCCTCGTTTCAAGAAACAATTGTTTAA
CAGTCTACTAGTCCTGCATAATCATATGGC------AATAATGCGCTAATTTGGCGGTGTGGCTTCTGCAAAAACTTGGT
GTAGTTATTAGTTGGATCGATCTGGGATGGAGTTAGTTGAGGGGCCATGCTATGTCAGAATTCAGTTCAGAATTAGTTGT
TAGGACTTAGGACCACTGCTAAAAGTGGGAAAAGAGGGAGCCTATCACTGTTTTTCTCTGTAAAGGTTTAAAAGACGACT
CTTCGGCTAAACTAAATAACCCAAAGTGTTAAACATATGAACCCTGGGGATTTATAAAAAGCACATAATATCATGCCATC
TGGCAGCTCGGATATCAAACCCTGCCAAAGAGCTCCATTTCAAAAGGATATGGATGTCCTTGTCGAAAAAGGAAGCTACA
AAAACAGAGGACGGAGCAAGTAATGGG-AAAAAACATAGACAATAAAGTAAGTAAGATTCTAGCTAGGGTACCACCAAAT
TATGAACAGTAATGGCACAAACGCAATTGATAACGATTGGTCAGAGAAGAATTAATAAAAAGCGAGTACCCGTTCATGGA
TTCCAGCTGCAAAGAGGGGTTTCTTTTACTCGTTGGTTGATCAACTCAAAGGGCAAGAAGCTTCTTCTACCCTTCATCTT
TGCTGGCTCCAGGCAGGCCGGGGTTCCTTTCCGCAATCCACTCGAACAAGACGGCTTCATGGTTTCACCCAACCCATGTG
AATTTTGCCGCTTGACCTTGTCACACACAGCAGCACAGTAAGCTCAGACAACTGAAAGATTACGGT
>chr5D_75
--------------------------------------------------------------------------CTAGGG
TGGAATAAAAGACGTTTTCCACAGAA--AAAAAAGGTTAGGATAACAGATATAGATATTACACCTATCAGA---AGTAGA
CTCCTAACAGTGGCTTAAAATGGTGACCACCGCCACGGAATAGTGAATGCAAGACGGAAAAGGCTAGACAAGTTGCGCCT
GTGCACTATG------CCAAACAGGAAGAATCGATGAAGCCCCCATCGTCAACATTCGTGCAGGCCACACATATAATTTC
TCGGTGGTTTGCGCTGATTGGGTGGCGAAAG-----------CATATTATACATAAGCACAAGAGCCAAAGAAGATTCGA
TAAAAGGAACAGCTCGAGAGGCCGACAAGCACGGGGAATAACTAGAGCCAAAGGCATATCTCTCTTTCTCGTAGGTTAAG
TTCAAAGGAAAGGATCATATATAATAGAAGTAGTCCCCCGCCCCGTCCCCCCGCGTCGTCCGCTCTCGGGCGACTCGGGG
GCCAAACCCTAGGCGCCGCCGGTCCCCCGCCCCCCTTCTCCTCCTCCCCCGCCGCCGCCGGCAGCCGTCGTCGGGCTTGC
CCGCGCGGCGGTAGGCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCGCATCGGGCGCTGCCGCCCGCTTCCCCTGCTCCCTGGTGGCCGCCGAGGCCGGCCCTC
TGCGGCGGCTGCCGCCGGCGTTGTCGCCCCGCGCCTGGTCGCCGGGGACGGCTCCGCCAGTCAGATCCGGCCGCCTCGGC
CCTGGGATCGGGGCCATCTCCGATCTGGCGGCTGGTGGGCCGGGGTTCGCCGGATCCACCGGATCTGGCCAGCGTGGCCT
TGCCTCGTCTTGCCCGGCTTGGGTGTTCGCGGTGTGGTGCTCCCTAATGGCGGCGATGCGGGTCGTTCTCCATGTTTTGA
CGGGATGTGTGCGGTGGGTGGATGCCGGGGCGGCGGCCTCGGGCGGTGTGGACGGTGTTGCCTCTTTGGCGGGCGACGGC
CGTGGGTGTTGGTGGTCCGCGACTTCGGCCGTGCGGGCGGCGAGGTCTCGGTGGACGTCTACTACAGTGGGTCGGGGTGC
CCCGTCACCCGGCGTGCCTGCTTCGATGAAGTCGAACGCCTTCTTCAGCTGCGTGCGCTCCTCTGGCCAGGTCTTTGGCC
GAGTGGATGGGATGGGGGCGGGACCGGGGGAAACCCTTGGCCGTCGGCGGAGGCCACGACAATGGCGGCGCCTTTGCTGG
GCGTCGGTTCCCTTCTTGGAGGCCTTGTCGAGGTCCGCTCCCATCTTTCACTGTGCTCTTCTTTTGGGCGAAAGCTCTAG
TTCCCCTTGTGGGCGACGGCGTCGTACCCTCGTCGTGCTCCTTCTTGAAGGCGTCGCCTCGGGTTCCCGGAATCACGGTG
GGCGCTTTGCGGTGCGTGTGAGGTGTTTGGCGGCGGCAATGTGTGCAACGTTTCATCTATTCTACCGCCGGTCTTCCTCT
TGTGGTAGCACTCCTTCGGCTTGGAGATGGACTGGCATAGGTGGTGGTCGTCATTTGGCGTCATGGTGGCGTCGATGGCG
GAGGAACCTGCCAAGGTTGGTACCTCAATCTGCTCTGAAGATGGACAAGTGGAAGATGGTGGCAACGACACATGTCAGTG
CGTCGGACTGGATTGTGCCCCGGACCCGGTATGTGGCTCGGTCGGGGCTTCCAGCTTTAGATGTTAGGCTTAGGTGAGAG
GCCTGGGTATGTGGCCCAGCTTGCACCCCTTCATCATATGGATAGGAGTAGCGGCATATGTTGCCAAGATGGCGGATTCA
GGCATATTATTGTACTACTTTGTAAGGTCGTCGAGAATAATCAATAAAATGGCCGCATGCATCTTTCAGATGCAGAGGCC
GGGGGTCATCCCCCTTTTCTAAAAAAATATATAATAGAAGTAGTACTGATACTTTTCCTTTTCCTGGGCAGGTCATCATT
TGATTCAGCACTAAAAGAAGATGATTAGCACATATAATCAACACCGGCGAGATAGATAGATAGAT---------------
-CAACATCATTGCGAGGAAATGACGTTGTGAATTGGTGA-GATTTCCATTAACAAACACGATGGGCCATAAGCAAGAGGG
A---------------------------------------------TTAATGAATGAGGCTAAGCAATAGCAGACAAAGA
GTTTTATGAGCAATAAGGAAACGCAGAACTTCATAAAGAGAAGGCATCTTACCAACGTGCATTC------CACCAATAAC
AAAATGCAAAAACGA--TTTATCTATACGCTCTGTTGGCGCCACTAACTCTGAAGAAAACGGTCAGTGGG--GTTTTGTC
ACTGAGTGCAGGCATCAATCAGTCTGTCTTTGACCGTGCCCTCGGGGCCAAGGAGTCGGGTACAAAGGCACACGACAGCC
AAA-GTCAATTTACTAGGTAGGAAAAA-CACGGACGATCACCCATCACCCACTC--CCAAAATCCGCGGTATGAACAAAA
TCGCGTCGCGAAAACGAAAACGAAGCGGTCAACCGAAGCTTTTGGTTTTATTTTGCATTTGCATGGATGCGCGCCAATGA
TACCCCGGACATCATCATTAAACAAAGAGAGAGAGAGAGAAAGAAAGAAACATAGAGGCCATGAACAAACGATGCA----
CTCGCCACCAACGAACACCCAAGGAATAACAAGCG-------------GAGAAAGGCGCCGGCCGGCTATATAAGCCGAA
TTGAACGCACGGCAGGACATATACTAGAACACAAATTCCAAGAAAAGAAGCAGCAGA--CATTCCATTACCT--------
---------ATGGCGATGATGGGGTCGA---------CGGCGGCGGTGCTCCTGGCGCTGGTGGTGGTGGCGTCGCCGCT
GCTGCTGGCGGCGTCGCAGCCGGTGGGGGCGCCGAGCATGGCGCCGCCAGCCGCGGCGCCGGCGACGAACAACTCGCGGC
TGGAGAAGGCGTACGTGGCGCTGCAGGCGCTGAAGAAGGCCATCACGGACGACCCCAAGAACCTGACCAAGAACTGGTGC
GGCCCCGACGTGTGCAGCTACTACGGCGTCTACTGCGCGACGGCGCCCGACGACCCGTGCGCGCGCACCGTGGCCTCCGT
GGACCTCAACCACGGCGACCTGGCCGGCACGCTGCCGGAGGAGCTGGGCCTGCTCTCCGACCTCGCCGTCTTCCACCTCA
ACTCCAACCGCTTCTGCGGCGCGCTCCCGGACGCGCTCCGCTCCCTCCACCTCCTCCACGAGATCGACGTCAGCAACAAC
CAGCTCACCGGCAACTTCCCCTCTCAGCTCCTCTGCCTCCCCAACGTCCAGTACGTCGACATCAGGTACGCACG------
---CATCATCATCATCATCATCATCTGCACCTCCGGTCCTGCACCGCACTTCACAGAGGTTTAACAACTCA----CTGTC
TGTCCATGGCGTCTCTGAAGGTTTAACAACTTCTGCGGCGAGGTGCCGGCGGCCATCTTCGAGAAGAAGATCGACGCGCT
CTTCATCAACAACAACAACTTCGAGTTCACGCTGCCGGCCAACTTCAGCAGCTCCACGGCGTCGGTGATCGTGCTGGCCA
ACCTGCCGCGGGTCGGGGGGTGCCTGCCCAGCAGCATCGGCGACATGGCCGGGACACTCAACGAGCTGATCCTCCTCAAC
AGCGGCATCTCCTCCTGCATCCCGCCGGAGATCGGCAAGCTGGACAAGCTCACGGTGCTCGACCTCAGCTCCAACGGCAT
CGTCGGCAAGCTGCCGGACACCATCGGCAACATGCGCGCCCTCGAGCAGCTCAACGTCGCGAACAACATGCTCGCCGGCG
AGATCCCCGAGAGCATCTGCGCGCTGCCAAACCTCAAGAACTTCACCTACTCCCACAACTTCTTCTGCGGCGAGCCGCAC
CGGTGCCTCGAGGTGCCCCACATCGACGACCGGCAGAACTGCATCGCCGGACGCCCCGACCAGCGGCCTGGCGAGCAGTG
CATCGAGTTCCTCCACCGGCCGCCGGCACAGTGTGCTGCGCACGGGCAATCGTCGCCACCGCCGATGTACGCGCCTCCAC
CGCCGATGTACTGATACGTGGCAGACGGCAATACTGCAATTTGTAACTGTTTGCTGCCTTTGTGCCGTGAGAAAGGGTAA
AAATGCACACATTTGGTATATACTGTAATCTTTATTTTTCGGAAACAAATGAAATAACAATGGATTGGTAGATTTGCGTT
ACAGAACTCAACTGAAAGGCAAAGAATCATTTCAGTGTTCTTTACCTGTTCCTTCCTCATTTCAAGAAACAATTGTTTAA
CAGTCTACTAGTCCTACATAATCATACGAA------AATAATGCGCTAATTTGGCGGTGTGGCTTCCGCAAAAACTTGGT
GTAGTTATTAGTTGGATCGATCTGGGATGCAGTTAGTTGAGGGGCCATGCTATGTCAGAATTCAGTTCAGAATTAGTTGG
CAGGACTTAGGACCACTGCTAAAAGTGGGAAAAGAGGGAGTGTATCACTGTTTTTCTCTGTAAAGGTTTAAAAGACGACT
GTTCGGCTAAACTAAATAACCCAAAGTGTTAAACATATGAACCCTGGGGATTTATAAAAAGTACATAATATCATGCCATC
TGGCAGCTCAGATATCAAACACTGCCAAAGAGCTCCATTTCAAAAGGATATGGATGTCCTTGTCGAAAAAGGAAGCTACA
AAAACAGAGGACGGAGCAAGTAATGAAAAAAGAACATAGACAATAAAGTAAGTAAGATTCTAGCTAGGGTACCACCAAAT
TATGAACAGTAATGGCACAAACGCATTTGATAACGATTGGTCAGAGAGGAATTAATAAAAAGCAAGTA-CCGTTCATGGG
TTCCAGCTGCAAAGAGGGGTTTCTTTTACTCGTTGGTTGATCAACTCAAAGTGCAAGAAGCTTCTTCCACCCTTCATCTT
TGCTGGCTCCAGGCAGGCCGGGGTTCCTTTCCGCAATCCGCTCGAACAAGACGGCTTCATGGTTTCACCCAACCCATGTG
AATTTTGCAGCTTGACCTTGTCACACACAGCAACACACTAAGCTCAGACAACTGAAAGATTACGGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSS---S---------SS---------------S----S-----------S-------
------S----S---S----------------------------------------------------------------
--------------------------------------------------S--------------S--------------
----------SSSSSS-------------------------S--------------------------------------
-------------------------------SSSSSSSSSSS--------------------------------------
----------------------------------------------------------S---------------------
----------------------------------SS-S------------------------------------------
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----------------------------S---------------------------------------------------
-------------------------------------------------------------------------S------
-------------------------------------------------------------S------------------
------------------------------S-------------------------------------------------
-----------SSSSSS-----------------------------------------------------SS--------
--------------------------------------------------S-----------------------S-----
--------------------------------------------S-----------------------------------
------------------------------------------S-------------------------S-----------
--------------S----------------------------------------------------S--------SSSS
---S------------------S------------SSSSSSSSSSSSS-----SS-------------------S---S-
--S-------------------------S------S-S----S----S-SSSSSSSSSS-------------SSSSSSSS
SSSSSSSSS------------SS-SS-SSSSSSSSSS----------S------------------------------S-
---------------------SS----------S----------------------------------------------
--------------------------------------------------------------S-----------------
------------------S--S----------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------------S---------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------S-----------------S----------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-S-----------------------------------------------------------S------------------
------------------------------SSSSSS--------------------------------------------
-------------------------------------------------------------------------------S
--------S-----------------------------------------------------------------------
-----------S--SS-----S-------------------------S----------------------S---------
--------------------------------------------------------------------------------
-------------S------------------------------------------S-----------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------------------------------
>forward_211
--------------------------------------------------------------------------------
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-------------------------------GCCACCGAATAGTGAATGCG-----------------------------
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>reverse_3129
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--------TATGGCGATGATGATGGGGC----------------------------------------------------
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>forward_3007
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---------------------------AACAAGAGAGGTCCCGGAGA---------------------------------
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------------------------------------------------------------------
>reverse_4800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
TAGGACTTGGGACCACTGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
