>input_sequence_48718
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-----------------------ATGACTGGCTGCAACGGCAACGGCAACGGCAACTCGTCCGCATCCACCATGGGACAG
CAGGTATCTTGATCGAC--------GCCATCTCTCTGAATTCAGAACCCATCCCCTGTTCCTGAGAAAGTTTCAAGGGAG
ACCAAC-------------------------CAGTTTCTTGAGGAATTTTTCCGTTTCACCGCTCACAGGCGGTGCCCTG
TTGCTATCGTTGATGCTGTCTTGCTCCCGATTTTTCCTCCCTCTCCCTGTGAGTTGACGTAGAAACAATGCAGTGTTGCG
TGTCGACGACCGGTTACCGGAAGATATTTTCTAGCTGAGCGTTATCTCAAGATTTTATT-----T-----TAGGCCCGTT
GATGTTTCTTCATACAGCATGCCGAGGACGAGGAGCG-TTATCTGAACATTTTATTTCCGGACCGGTTACCAGAATAACA
CTCCAGCACAAAGGAGAACACTC----TTCGGTTGGGGCATCTAACTAGTCGCGTGCTGTCTAATTTTC-TAGCGCAAAA
GAGAGACTTTTGCACAGCACGGGAGATTGGAGTCTTCTTATTTGAATCGCACCC----CGGCCACGCAGTGCATATCTTT
TCTTCCACTTATCCCCAACAGCTACACAACAAAACCGGTCAAATCAAATCAAATCAAATCATGCGTGTCGTCGATCGATA
GGGCCAT-GGGAGGGGGTTGCTTTTGTTGACTACACATACAAACCAT--ATAATCACTGCGTCAACTTTACACAAGTCAT
TTGTTTATCTTTGTACTGTTCTGCAGATTCTTTGATGCTGATTTTTTTAGGCCGTTAAGAAAAGTCGAACTCTGAAACCC
CTGAA---TTTTTTTGAGTTGCAGACGGTCACTGAGAAGAAGTTCGGAGGAATTGCACCAAAGAAGCCTCTGATTTCAAA
GGTACGCAACAGCGCGAACGTTCATCATCAAGCTTGGCTTCCAACACACTCAATCGCCATGGACTTGTTTCATCACAGTC
GTTTCATAAA--CAATTATAGAAGAGGCTGTCGCACTAGTACTACCACTATTGTTTTCTGAAACTAATACACGAGTTATG
GCAATGAGCGTTCCATGAGCCTGAAGAAATGTATTCAGAATGAGGATCTGGTTATATTTGTTTGCATTGATTTTCTATTC
TA-CTACTGCTACTTCAGGACCATGAGCGCGCCTACTTCGACTCCGCGGACTGGGTCCTCGGCAAGGTACTGGTGTAA--
TCCAAAAACTGAATATCATCTATACTATACTGCCCTGACAAGTTAGATGTGTGCTACATCCACAAAACCCCTTGTCTGAA
TCTTGTGTTTCCTCCTT-TGCTTCAGCAAGCTGCAAGCAACAACGCACAGGCGGCGGCAATCGAGTCCTTGAAGCCAAAG
CTAAAGGTAGGTTGTGATCCTTGTCCCATCTCAACTGCACACTGCATTACATTGCACTGCAAGCATCTATCATTCAGACT
TTCAGAGCTGAACCGCGGTGTAAGTAATCGATGC---ATCTGCTCTGTTTGTTGCGTGCAGAGGACGCCCCATCACCAGC
TCCCACCTCGCAAGCCGGCCTGCGCGTCGGGCTGA---------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr2D_1_TraesCS2D01G093600
CAGATTTTGAGAATGGGTCGGTGCGTTGGCCCGGCGTTTTGTCCGCGGCGACCCAAACGGACATGAGCGGACGAAATGGG
TCGCCCCGTTGGAGTTGCTCTTATGTTGTTTGTTTATCTGCATGCACTCAGGCGTTCGGCTAATTCTGCTTATTTGCTAC
TCCCCGGTCCCATAATATAAGAACGACTTTCAAGCTGAGTATTTATCAGGTTCTTGTCATGGGCTCCCTACCTGAACCAC
CACCAGGATCGCACCTACTGTACTTGC----ACGTACCTGATTTTTATCCACCCGCAAAAAAAAAAGCTATCTGATTTTC
ATTGACAGATTAGGGGTTGGAGGACAAGCAGCACTACAAATCAGGGGTGCTGTCTCCCGTGCGGCGATCT-----CTTTA
CCTTCCAAGCAAGCAAACCATGGCGCGTAGCGCGACAGGAAGGGGGACACAATAACACGCTGCCATGGACGCCATCGCCG
C-AAACTTGGAAGCAAATAACCTCACTCCTAATTACAGAA-TTACCACGCGCCCCGCCATA-----------TACTAGGA
AAGTCATAAGCGAATTAACAT--------------CTCTCTAATCTAAACCACGAGTTCTCCACGCGCGAC----CGGGT
AAAAATCGCCACCTTTTTCCTGCCTTTTCCTTCCTACCCCCTCCCTCCC-----CCGGCCACATCCACGGGCATATTCCC
AGCTCCC-----------TCGCTATATATAGGCCATTTCCATTCACACGTTTTCTCCCGTCTCCGTTCACGATCGAGCCA
TCCGCATCGCCGTCGCCCTCGATCGCCTTCCCTTCCGTCCCTCGCTTCCACACAGTAGGTG-CCCCCCTCACCTACCCCA
AATCTTTGCGCAATTCACACGGATTCGCGCAAGCACATGCTTATTATATAGACCCCGATTGTC-----CATCTGCTGTTC
CA-GACTCCCAGGGCCTGCTGCTGAAACCTGCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCTTGTTTGCTGTGGATATA
TCCGACGGGGGGAGATCGACCAGATGACTGGCTGCAACGGCAACGGCAACGGCAACTCGTCCGCATCCACCATGGGACAG
CAGGTATCTTGATCGAC--------GCCATCTCTCTGAATTCAGAACCCATCCCCTGTTCCTGAGAAAGTTTCAAGGGAG
ACCAAC-------------------------CAGTTTCTTGAGGAATTTTTCCGTTTCACCGCTCACAGGCGGTGCCCTG
TTGCTATCGTTGATGCTGTCTTGCTCCCGATTTTTCCTCCCTCTCCCTGTGAGTTGACGTAGAAACAATGCAGTGTTGCG
TGTCGACGACCGGTTACCGGAAGATATTTTCTAGCTGAGCGTTATCTCAAGATTTTATT-----T-----TAGGCCCGTT
GATGTTTCTTCATACAGCATGCCGAGGACGAGGAGCG-TTATCTGAACATTTTATTTCCGGACCGGTTACCAGAATAACA
CTCCAGCACAAAGGAGAACACTC----TTCGGTTGGGGCATCTAACTAGTCGCGTGCTGTCTAATTTTC-TAGCGCAAAA
GAGAGACTTTTGCACAGCACGGGAGATTGGAGTCTTCTTATTTGAATCGCACCC----CGGCCACGCAGTGCATATCTTT
TCTTCCACTTATCCCCAACAGCTACACAACAAAACCGGTCAAATCAAATCAAATCAAATCATGCGTGTCGTCGATCGATA
GGGCCAT-GGGAGGGGGTTGCTTTTGTTGACTACACATACAAACCAT--ATAATCACTGCGTCAACTTTACACAAGTCAT
TTGTTTATCTTTGTACTGTTCTGCAGATTCTTTGATGCTGATTTTTTTAGGCCGTTAAGAAAAGTCGAACTCTGAAACCC
CTGAA---TTTTTTTGAGTTGCAGACGGTCACTGAGAAGAAGTTCGGAGGAATTGCACCAAAGAAGCCTCTGATTTCAAA
GGTACGCAACAGCGCGAACGTTCATCATCAAGCTTGGCTTCCAACACACTCAATCGCCATGGACTTGTTTCATCACAGTC
GTTTCATAAA--CAATTATAGAAGAGGCTGTCGCACTAGTACTACCACTATTGTTTTCTGAAACTAATACACGAGTTATG
GCAATGAGCGTTCCATGAGCCTGAAGAAATGTATTCAGAATGAGGATCTGGTTATATTTGTTTGCATTGATTTTCTATTC
TA-CTACTGCTACTTCAGGACCATGAGCGCGCCTACTTCGACTCCGCGGACTGGGTCCTCGGCAAGGTACTGGTGTAA--
TCCAAAAACTGAATATCATCTATACTATACTGCCCTGACAAGTTAGATGTGTGCTACATCCACAAAACCCCTTGTCTGAA
TCTTGTGTTTCCTCCTT-TGCTTCAGCAAGCTGCAAGCAACAACGCACAGGCGGCGGCAATCGAGTCCTTGAAGCCAAAG
CTAAAGGTAGGTTGTGATCCTTGTCCCATCTCAACTGCACACTGCATTACATTGCACTGCAAGCATCTATCATTCAGACT
TTCAGAGCTGAACCGCGGTGTAAGTAATCGATGC---ATCTGCTCTGTTTGTTGCGTGCAGAGGACGCCCCATCACCAGC
TCCCACCTCGCAAGCCGGCCTGCGCGTCGGGCTGATCGACCGCGAC---GCGACAAGGTAAGAAATGTTCTCTCTTCTTC
ACATGGTGCTGCATGCACGTTTCTGAACTAG---CATGTTTCTGTAGATCCAACTATGT-TTCTGAACTCTCTGTTCTTA
TCTTATCTGACTGATCATCATCATGCAGGGATCACCAGAGGGAGCCGGAGCGGTCGCATGAGACGACGAAGCTGGTGATT
TAGCTGGTTGCATATGTTAGGAGTCGATCGAGTCAGGGTTTGAGATCTGCAGTTAGACCCTTTTGGTTCTAGCAGCCTAA
GAT-TGCCACAGTAGGGCTAGTAGCATACTCCTACAGTGTTATGGCTTCAGC-TTGAGATGTTTGGTTTTCAGTACTTTT
CTGTCTCTAATTTTCTTCTTCTTTCAAATCTACGAGCTTCGGCGCTCCCGGTTTCACTGAAATGAAACAAAATCGAATTC
GA---------------------------ACAATTTCCCTGCAAAAAAAACCCTCCACAACACTTAAACATCAGGGCCAC
GGTCTGCCCAAACTACTCTACCATAGTACCATCAACTATATACCCGCAAAGAAAAGAAGTACCATCAACTATATGGCCAT
GCTGCACAACACCTAAGAACTGGAAAGAACCGCAAACCGTCATGGTCAACTCAGTAACAAACACCCTGCCTCGCACGTTT
TCGCCCTACGCAAATTCTTCTGGTCATCGGCATACGAGTACAATCACGCTGCAAAACATGATCAAACTGGCTTCA-----
----------------------GCTATCAGAAATTAACTCATTGTACCTGAAAACATGGCAATACGTAGAAACCCACTTG
CATTTTGGAATTTTTTGAACTCATGACAGAAATTGCTATATTGGGCCGGTAAAGGCTGTTTTTTCTAGAGAGAGAAGTGA
AAAGACTATTAGAGCAACTCTAGCAGACCCCGTAAAATCCCAACTCGCATAAGTGTTTTGCAGTTCGGGGAAAAGTGTGT
ATGCAGGCCGGCGCGGGCGAGGTGAGACCCAGTGACGGTGTCCTGGACTAGGGATACT
>chr2A_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TATTTCTCAGGTTCTTGTCATGGGCTCCCTGTCTGAACCAC
CACCAGGATCGCACCTACTGTT----C----ACGTACCTGATTTTTATCCACCCGCAACAAAAAAAG-TATCTGATTTTT
ATTGACAGATTAGGGGTTGAAGGACAAGCAGTACTACAAATCAGGGGTGCTGTCGCCCGAGCAGCGATCT-----CTTTA
CCTTCCAAGCATGGCGCGGCGC------AGCGCGACAGGAAGGGGGACACAATAACACCCTGCCATGGACGCCACCACGA
CAAAACTTGGAAGCAAATAACTTCACTCCTAATTACAGAA-TTACCACACACACCGATCCATATATACTCCGTACTAGGC
AAGTCATAAGTGAATTAACCATCCTCTCCATTTTTCTAT---CTAAAAACCACGAGTTTTCCACGCGCGAC----CGGGT
AAATATCGCCACCTTTTTCCTGCCTTTTCCCTCCTACCCCCTCCCTCCCTCCCCCCGGCCACATCCACGGGCATATTCTC
GGCTCCG-----------TCTCTATATATAGGCCATTTCCATTCACACGTTTTCTCTCGTCTCCGTTCACGATCGATCGA
TCCGCATCGCCGTCGCCCTCGATCGCCTTCCCTTCCGCCCCTCGCTCCCACACAGTAGGTGCCCCCCCTCACCTACCCCA
AATCTTTGCGCAATTCACACGGATTCGCGCAAGCACATGCTTATTATATAGCCCCCGATTC-----TTCATCTGCTGTTC
CAGGACTCCCACGGCCT-CTG---GAACCTGCTTCTTCTTCCTCGTCGTCGCAGTCTTCTTCTTGTTGTTGTTTGGTGTG
GA---------GAGATCGACCGGATGACTGGCTGCAGCGGCAACGGCAACGGCAACTCGCCCGCCTCGGCCATGGGGCAT
CAGGTACTTTGGTCGATCGACCGATGCCATCTCTCTGAATC--GGATCCCTCCCCTGTTTCTGAAGGAGTTTGAACACAC
ACGCCAATTCAGTCCGGGAGAA----CCGTTCAGTTTCTTGAGGAAATTTTCC-TTCCAACGATCACG---GGCGCCCTG
TTGCTGTCGTTGATGCTGTCTTGCTCTCCTTTTCTTCTCCCTCTCCCTGTGAGTTGGCGTAGAAACAATGCAGTGTTGCG
TGCCGACGACCGGTTATCCGAAGATATTTTCTAGCTGAGCGTTATCTCAAGATTTTATTTTCCTT-----TAGGGCCGTT
GATGTTTCTTCATA---CATGCCGAGGACGAGGAGCG-TTATCTGAACATTTTATTTTCGGGCCGGTTACCAGAGGAACA
CTCCAGCACAAAGGAGTACTTACTCTGTTCTGCTGGGGCATCTGACTAGTCGCGTGCTGTCTAATTTTC-TAGCACAAAA
GAGAGACTTTTGCACTGCACGGGAAATCGGAGTCTTCTTATTTGAATCGCACGCACCACAGCCAGTCAGTGCAGATCTTT
TCTCCCACTTATCCCCAACAGCTACACAACAAAACCGGTCAAATCAAATCAAATCAAATCATGCGTGTCATCAGTCGATA
GGGCCAT-GG-AGGGGGTTGCTTTTGTTGACTGCACATACAAACCAT--ATAATCGCTGCGTCGACTTTACACGAGCCAT
TTGTTTATCTTTGTTTTGTTCTGCAGACTCTTTTATGCTGAATTTTTGAGGCCGTTAAGAAAAGTCGAACTCTGAAACCC
CTGAA---TTTTTTTGAGTTGCAGACGGTCACTGAGAAGAAGTTCGGAGGAATTGCACCAAAGAAGCCTCTGATTTCAAA
GGTACGCTACTGCGTGAACGTTCATTATCAAGCTTGGCTTCCAACACACTCAATCGCCATGGACTTGTTTAATCACTGCC
GTTTCATAAAAATAATTATAGAAGAGGCTGTCGCACTAGTACTAC---TATTGTTTTCTGAAACTAATACAT--------
--AATGAGCGTTCCATGAGCCTGAAGAAATATATTCAGAATAAGGATCTGATTATATTTGCTTGCATTAATTTTCTATAT
ATTCTACTACTGCTTCAGGACCATGAGCGCGCCTACTTCGACTCCGCGGACTGGGTCCTCGGCAAGGTACTGGTGCAA--
TCC-AAAACTGAATATCATCTAC-----ACTGCCCTGACAAGTTAGATGTGCTAT--ATCCACAAAACCCCTTTTCTGAA
TCTTGTGTTTCCTCCTTTTGCTTCAGCAAGCTGCAAGCAACAACGCACAGGCGGCGGCAATCGAATCCTTGAAGCCAAAG
CTAAAGGTAGGTTGTGATCCTTGTCCCATCTCAACTGCACACTGCATTACATTGCACTGCAAGCATCTATCATTCAGATT
TTCAGAGTTGAACTGCGGTGTAAGTAAT--------------CTCTGTTTATTGCGTGCAGAGGACGCCCCATCACCAGC
TCCCCCCTCGCAAGCCGGCCTGCGCGTCCGGCTGATCGACCGCGATGATGCGACAAGGTAAGAAATGTTCTCTCTTCTTC
ACATGGTGCTGCATGCACGTTTCTGAACTAGTAGCATGTTTCTGCAGATCCAACTATGTGTTCTGAACTCTCTGTTCTTA
TCTTATCTGACTGATCATCATGATGTAGGGATCACCAGAGGGAGCCGGAGCGGTCGCATGAGACGACGAAGCTGGTGATT
TAGCTGGTGGCATATGTTAGGAGTCGATCGAGTCAGGGTTTGAGATCTGCAGTTAGACCCTTTTGGTTCTAGCAGCCTAA
GAT-TGTCACAGTAGGGCTAGTAGCATACTCCTACAGTGTTATGGCTTCGGC-TTGAGATGTTTGGTTTTCAGTACTTTT
CTGTCAGTAATTTTCTAC-TCTTTCAAATCGAGGAGCTTCGGCGCTCCCGGTTTCATTGAAATGAAACAAAAACGAATTC
GA---------------------------ACAA---------------------------CACTTAAACATCAGGGCCAC
GGTCTGCCCAAACTACTCTAACATAGTACCATC---------------------------------AACTATATGACCAT
GCTGCACAACACCTAAGAACTGGAA-GAACCACAAATCGTTATGGTCAACTCAGTAACAAATACCCTGCCTCGCACGTTT
TCGCCCTAGGCTAATTCTTCTGGTCATCGGCATATGAGTAGAATCACGCGGCTAAACATGATCAAACTGGCTTCAGCCTG
AGATGTTTGGTTCAAGTACTTTGCTATCAGCAATTTACTCGTTGTCTCTGAAAACATGGAAATACGTACAAACCCACTTG
CATTTTGGAATTTTTTGAACTCATGACAGAAATTGATATATTGGGTCGGTGAAGACTGTTTTTTCTAGAGAGAGACGTGT
AAAGACCATTAG--------------------------------------------------------------------
----------------------------------------------------------
>chr2B_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TATTTGTCAGGTTCTTGTCATGGGCTCCCTACGTGAACCAC
CACCAGGATCGCACCTACTGTT----CTTGCACGCATCTGATTTTTATCCACCCGCAAAAAACC--G-TATCTGATTTTT
ATTGACAGATTAGGGGTTGGAGGACAAGCAGCACTCCAAATCAGGGGTGCTATCTCCCGTGCGGCGATCTCTTTACTTTA
CCTTCCAAGCAAGCAACCATGGCGCAGCCTCGCGACAGGAAGGGGGACACAATAACACGCTGCCATGGACGCCACCACCG
C-AAACTTGGAAGCAAATAACCTCACTCCTAATTACAGAAATTACCACGCGCCCCGCCATA-----------TACTAGGA
AAGTCATAAGTGAATTAACCATCCTCTCCATTTTGCTATCTACTATAAGCCACGAGTTCTCCACGCGCGACGGACCGGGT
AAAAATCGCCACCTTTTTCCTGCCTTTTCTTTCCTACCT-------------CCCCGGCCACATCCACGGGCATATTCTC
AGCTCCCTCTCCCTAGTCTCTCTATATATAGGCCATTTCCATTCACACGTTTTCTCTCGTCTCCGTTCACGAT----CGA
TCCGCATCGCCGTCGCCCTCGATCGCCTTCCCTTCCG-------------CACAGTAGGTG-CCCCCCTCACCTACCCCA
AATCTTTGCGCAATTCACACGGATTCGCACGCCCACATGCTTATTATATAGCCCCCGATTGTGTTGTTCATCTGTTGTTC
CAGGACTCCCAGGGCCTGCTG---AAACCTGCTTCTTCTTCTCCGTCGTCATCTTCGTCTTCGTCTTCATCGTCTTCTTC
TTGT------GGAGATCGACCAGATGACTGGCTGCAACGGTAAC------GGCAACTCGTCCGCCTCGGCCATGGGGCAT
CAGGTACTTTCATCGATCGACCGATGCCATCTCTCTGAATC--GAACCCCTCCCCTGTTTCTGACGGAGTTTCGACACAC
ACGCCAATTCAGCCCGGGAGAAAGAACCGTTCGGTTGCTTGAGGAAATTTTCC-TTTCAACGCTCACG---GGCGCCCTG
TTGCTGTCGTTGATGCTGTCCTGCTCTCCTTTTTCT--------------------GCGAAGAAACAATGCAGTGTTGCG
TGTCGACGACCGGTTACCGGAAGATATTTTCTAGCTGAGCGTTATCTGAAGATTTTATT-----TTACTTTAGGTCCGTT
GATGTTTCTTCATG---CACGCCGAGGACGAGGAGCGTTTATCTGAACATTTTATTTCCGAGCCGGTTACCAGAAGAACA
CTCCAGCACAAAG-------TACTCTGTTCGGTTGGGTCATCTCACTAGTCGCGTGCTGTGTAATTTTCTTAGCACAAAA
GAGAGACTTTTGCACTGCACGGGTAATCGGAGTCTTCTTATTTGAATCGCACCC----CAGCCACGCAGTGCAGATGTTT
TCTCCCACTTATCCCCAACAGCTACACAACAAAACCGGTCAAG-----TCAAATCAAATCATGCGTGTCGTCGATCAATA
GGGCCATAGG-AGGGGGTTGCTTTTGTTGACTACACATACAAACCACACATAATCGCTGCGTCGACTTTACACGAGCCAT
TTCTTTATCTTTGTTTTGTTCTGCAGATTCTTTTATGCTGATTTTTTGTGGCCGTTAAGAAAAGTCGAACTCTGAAACCC
CTGATTTTTTTTTTTGAGTTGCAGACGGTCGCTGAGAAGAAGTTCGGAGGAATTGCACCAAAGAAGCCTCTGATTTCAAA
GGTACGCAACTGCGTGAACGTTCATTATCAAGCTTGGCTTCCAACACACTCAATACCAACGGACTTGTTTCATCACAGTG
GTTTCAT-AAAACAATTATAGAAGAGGCTGTCGCACTAGTACTACCACTATTGTTTTCTGAAACTAATACACGAGTTATG
GCAATGAGCGTTCCACGAGCCTGAAGAAATATATTCAGAATAAGAATCTGATTATATTTGTTTGCATTAATTTTCC----
ATTCTACTGCTGCTTCAGGACCATGAGCGCGCCTACTTCGACTCCGCCGACTGGGTCCTCGGCAAGGTATACTTGTGTAT
TCC-CAAACTGAATATCATCTAT-----ACTGCCCTGACAAGTT--------------------AAACCCCTTTTCTGAA
TCTTGTGTTTCCTCCTTT-GCTTCAGCAAGCTGCAAGCAACAACGCACAGGCGGCGGCAATCGAGTCCTTGAAGCCAAAG
CTAAAGGTAGGTTGTGATCCTTGTCCCATCTCAACTGCACGCTGCATTACATTGCACTGCAAGCATCTATCATTCAGACT
TTCAGAGTTTAACTGCGGTGCAAGAAATGATCAACCAATCTGCTCTGTTTGTTGCGTGCAGAGGACGCCCCATCACCAGC
TCCCCCCTCGCAAGCCGGCCTGCGCGTCCGGCTGATCGACCGCGAC---GGGACAAAGTAAGAAATATTCTCTCTTCTTC
ACATGGTGCTGCATGCACGTTTCTGAACTAGTAGTATGTTTCTGCAGATCCAGCTATGT-TTCTGAACTCTCTGTTCTTA
TCTTATCTGACTGATCATCATCATGCAGGGATCACTGGAGGAAGCCGGAGCGGTCGCATGAGACGACGAAGCTGGTGATC
TAGCTGGTTGCATATGTTAGGAGTCGATCGAGTCAGGGTTTGGGATCTGCAGTTAGACCCTTTTGGTTCTAGCAGCCTAT
GATTTGTCACAGTAGGGCTAGTAGCATACTCCTACATTGTTATGGCTTCAGCTTTGAGATGTTTGGTTTCCAGTACTTTT
CTGTCAGTAATTTTCTTCTTCTTTAGAATCGAGGAGCTTCGGCGCTCCGGGTTTCATTGAAATGAAACAAAAACGAGTTC
GAAAAATTTCCCGGCACAAACAACCTCCCACAA---------------------------CACTTAAACATCGGGGCCAC
GGTCTGCCCAAACTACCCTACCATTGTACCATC---------------------------------AACTATATGACCAT
GCTGCACAACATCTAAGAACTGGAA-GAACCACAGGACGTTATGGTCAACTCAGTAACAAAGGCCCTGCCTCGCACGTTT
TCGCCCTACGCTAATTCTTCTGGTCATCGGCATACGAGTAGAATCACGC-------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------------------------------
---------------------SSSSS-----------------------------------------S-----------S
--------------------------------------------------------------------------------
----------------S-SSS-SSSS-S----------------------------------------------S-S---
--------------------------------------------------------------------------------
----------S--------SS----------------S----S-S-----------------------------------
------------------------------------------------------------------------------S-
--------------------S-----------------------------------S-------------------S-S-
-------------------------------------S--------S---------------------------------
---------------------------------------------------S----------S-----------------
---------------------SSS--------------------S--S--S--------S-------SSSS--S-S-S-S
-SSSSSSSSS------------------------------------------------------S--SS-------S--S
------SS--------S-----------------------SSS------S---------S----SSS--------SSS-S
--SSSS----------------------------------------S------S-----S-------SSSS--S------
-----S--------------------S-SS-----S--------------------S-----------------------
--------------------------------------------------------------------------S-----
--------------SSS--------------------------------------------S-------------S----
----------------S--SSS---------------------S------------------------------S-----
---------------S--------S--S-------------------------------S-------------S------
---S----------------------------------------------------------------------------
----------S--------------------------------------------S-------S---------S--S---
--------------SS-----------------S-------------S--------------------------------
--------------------------------------------------------------------------------
----------S---S----------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S----------S--------S-----------------S---------SS
SS---------S--------------------------------------------------------------------
---S-------------------SSSSS-----------------------SSS-SS----------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----S--------------SSSSSS----------------------------------------------
----S-----------------------S---------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-----SS-----------------------S-S-----------------------S---------------S-------
---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----
-------------------------S-----S----S---S--------------------S------------------
-----------S----------------------------S--------S--S---------------------------
------------------------------S----S----S----SS------------S--------S-----------
-----------------------------------S---------S----S---S--------------------S---S
------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1031
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TCGTCGTCGTCTTGTTTGCT---------
--------------------------------------------------------------------------------
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>reverse_2011
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------AGCGCGAACGTTCATCATCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_1307
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGTTGATGCTGTCTTGCTCC-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_2592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------TGCATCTGCTCTGTTTGTTGC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_1337
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCCCTCTCCCTGTGAGTTGA-----------------------
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--------------------------------------------------------------------------------
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>reverse_3306
--------------------------------------------------------------------------------
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-------------------------AGAACCGCAAACCGTCATGG-----------------------------------
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----------------------------------------------------------
