>input_sequence_48671
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------ATGGGTAACACT-----
-GTTGCCGAGGAAGACATAGAAGACATACCAAATTCAGATGCAAATCCACCAATTTTGACTGAATATCACATCACAGTCC
CTACCCTTCACGACGGACTAATGCAAGGGGAACACCAACACGAGAGAAGGCTTCTGGATTTCCTGAAAGCAACGCCTTCA
GTGCAATGGCTGAAGGACATCAACGTCTGCGCGCCACTGGGAAAATTTCAGCTGCCATCGATCGGCGTCCACCGCTACCT
CCATGTCCACTTCATCAGAACTGTCGACTGGAGCTCACTGCTCGCCATCTGCAAGAACCACCTCAAGCATCCCCTCAACA
TCGCCCTACTCATCTGGCTGCTCTGCGTCGCCGCCGCCGGCGCCATGCTTGGGCTGCTCCTGTTGGGGCTGCTGAAGAAG
GCATTCCCTTCCAGGGCACTGAGGCACCACTGGATAGAGATCGACAACCAGATCCTCAACGCGCTCTTCACGCTCATGAG
CATCTACCAGCACCCCATCCTCGTCCACCACCTCGTTCTCCTCTGCCGGTGGCAGCCGGAGGACGCCGCCGAGGTAAGAA
AGGTGTACTGCAAGAATGGCGCCCGCCGTCCCAACGAGCGAGCGCACATGTCCTTCGTGGTGGCCCTCCTCCACATTACA
TGCATTTCGCAGTACATGGAGTGCAGCCTCTACTGGGGCTACCCAAGCAGGTCACGCTCCGAGTTCGCCGAGAACTTCTT
CTTCATCCTCGGCGTCGCCGCGCCGGTCGTCGCCGGCGCTCATATGGTGTACAGCCCTCTAGGCAGAGACGACGACGT--
-CGCTGCCGCCTCCTGCGAAGAGGCCAAGCAGCTCCACT---------CAGCCGGAGCCGAAGAATCGCCGGAAGAAACG
ACGGCTGTCGGCAACCCGATGTGGGCGGGGGAGCTGCTGGACTGCGGCGAGGACCCGGCGGCGTGCTACCTGTCGTTCCT
GTGCACGTTCTGCGTGTTCGGCTGGAACATGGAGCGGCTCGGGCTGGGCAACATGTACATGCACACCGCCATGTTCCTGC
TGCTGTGCGTCGCGCCCTTGTGGGTGTTCAACGTCACGGCGCTCAGCATCCACGACTACGCCCTCAGCGACGCCTTCGGC
GCCGCCGGGGTGGTGCTCTGCTTCCTCGGCCTCCTGTACGGCGGTTTCTGGAGGATCCAGATGAGGAAGCGGCTCGGGCT
GCCCCGGAGCAGGTGGTGCTGCGGCTCGTCGTCGCTGACGGACTACGCGCAGTGGCTGCTCTGCTGGCCGTGCGCGCTCG
CGCAGGAGGTGCGCACGGCGAACCTGTACGGCCTGAGGGACGACGGCGGTCTCTACGGGAAGCTGGTGGACGGCGGTGAC
CCGGAGCGAGGGCCGGACGTGCCGGTCTGCGTTGGGATGCACGAGGGGATCGATGCTGCCGTCCATCTCGCGGTGGACGG
CGAGATGATCCCGCCCGTCCAGCCGGTGGTAGAGTCTGGACGGCAGAGGCAAGCCGGCGCCGAAGAAATTGTTGCAAATG
GCAGTAGCGTCCAGCTCCAAAGTTGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3B_1_TraesCS3B01G379000
AGGCTGCACGCTTCAACCAGCATGGGAGCATATTATGTCGTATCGCCATTGCCTCCAAGCTTGACTGGTTCAGCCGGGCG
CACCAAGCCGAGCGCTTCCTCGAGTCCCGTCGGAGCGGCGCGCTACTGACGACGAGTCAAGAGTCAAGACTGACTGCTAT
ACTATTCGCGATGAAGTCCTTTTTGCTCGCAAACCCAGGAAAGACCTTTGTCCCGTTGGTGTGGGTCAGATACCCCGTAC
TTCAACTAACCTGCCGACCGCTTTCCCCTACACTCAACAGAACCAGTTCATCGGAGGTCCCACGCTTCCCCCCTCATT--
--------CAGGATCCTTCGCGCCTGCTGCGATCTGGATTCGGATGATCAATCGAGCGGCTTTTTGTCCAGTTCTTCCTG
GGTGATCCTCTATCCGGTTGGGGATTTTCCTTCGATCGGCTTCTCCTCCTAAGAGGTATGTTCAGTTTTGCTATAATTCG
TGTGCTC-----CTCTGTTCTTAGGGGACGCTTATGAATTGGACGATCAT----TTAGCGGCGGCTGTTTGATTTGGTGC
GGGTCCTTTTGTGCC-----TATGCTTTTGAGGTTCAGAAGAGGAAACATTTTTTCGTT---AAAGAAATCTCATACATT
CCGGTGATTTCCCTAGTTTGTGCAGAACTGACTA---------------------AGGATTTCTGAAACGCAAAATTTCG
CACTTCTGGATCATAGTGTCCAGTGAACATG------------------------------CTCTGATGATTAACATATT
ATTCCAGAACAATATTTGTGGCCTAGCCTAACTGTACTTTTGGAGAATTTGCTAGAGTACATTGAAATGATCACTGGATT
TATATCAAAATCTTC-AT-CTCGCATGCATATTTCAGGTTCCACTAG-----------TATGCTCATCCTACTTGATGCC
AGAAATCCAGA-----------GTCATTTTAACTACTTTTATAGCAGAAAGAACACTTCAATTCCATTAACTCACAGCTT
CAAGTTCATCATCCTCTGTCTCTGCTCAACCAATAAT-ACAGATTTCAGTCACACATACAGAAATGGGTAACACT-----
-GTTGCCGAGGAAGACATAGAAGACATACCAAATTCAGATGCAAATCCACCAATTTTGACTGAATATCACATCACAGTCC
CTACCCTTCACGACGGACTAATGCAAGGGGAACACCAACACGAGAGAAGGCTTCTGGATTTCCTGAAAGCAACGCCTTCA
GTGCAATGGCTGAAGGACATCAACGTCTGCGCGCCACTGGGAAAATTTCAGCTGCCATCGATCGGCGTCCACCGCTACCT
CCATGTCCACTTCATCAGAACTGTCGACTGGAGCTCACTGCTCGCCATCTGCAAGAACCACCTCAAGCATCCCCTCAACA
TCGCCCTACTCATCTGGCTGCTCTGCGTCGCCGCCGCCGGCGCCATGCTTGGGCTGCTCCTGTTGGGGCTGCTGAAGAAG
GCATTCCCTTCCAGGGCACTGAGGCACCACTGGATAGAGATCGACAACCAGATCCTCAACGCGCTCTTCACGCTCATGAG
CATCTACCAGCACCCCATCCTCGTCCACCACCTCGTTCTCCTCTGCCGGTGGCAGCCGGAGGACGCCGCCGAGGTAAGAA
AGGTGTACTGCAAGAATGGCGCCCGCCGTCCCAACGAGCGAGCGCACATGTCCTTCGTGGTGGCCCTCCTCCACATTACA
TGCATTTCGCAGTACATGGAGTGCAGCCTCTACTGGGGCTACCCAAGCAGGTCACGCTCCGAGTTCGCCGAGAACTTCTT
CTTCATCCTCGGCGTCGCCGCGCCGGTCGTCGCCGGCGCTCATATGGTGTACAGCCCTCTAGGCAGAGACGACGACGT--
-CGCTGCCGCCTCCTGCGAAGAGGCCAAGCAGCTCCACT---------CAGCCGGAGCCGAAGAATCGCCGGAAGAAACG
ACGGCTGTCGGCAACCCGATGTGGGCGGGGGAGCTGCTGGACTGCGGCGAGGACCCGGCGGCGTGCTACCTGTCGTTCCT
GTGCACGTTCTGCGTGTTCGGCTGGAACATGGAGCGGCTCGGGCTGGGCAACATGTACATGCACACCGCCATGTTCCTGC
TGCTGTGCGTCGCGCCCTTGTGGGTGTTCAACGTCACGGCGCTCAGCATCCACGACTACGCCCTCAGCGACGCCTTCGGC
GCCGCCGGGGTGGTGCTCTGCTTCCTCGGCCTCCTGTACGGCGGTTTCTGGAGGATCCAGATGAGGAAGCGGCTCGGGCT
GCCCCGGAGCAGGTGGTGCTGCGGCTCGTCGTCGCTGACGGACTACGCGCAGTGGCTGCTCTGCTGGCCGTGCGCGCTCG
CGCAGGAGGTGCGCACGGCGAACCTGTACGGCCTGAGGGACGACGGCGGTCTCTACGGGAAGCTGGTGGACGGCGGTGAC
CCGGAGCGAGGGCCGGACGTGCCGGTCTGCGTTGGGATGCACGAGGGGATCGATGCTGCCGTCCATCTCGCGGTGGACGG
CGAGATGATCCCGCCCGTCCAGCCGGTGGTAGAGTCTGGACGGCAGAGGCAAGCCGGCGCCGAAGAAATTGTTGCAAATG
GCAGTAGCGTCCAGCTCCAAAGTTGACCGCAGCTATTGGATGGTGACTGATGCTGTATACTTATGCGAAA----GCTGAC
GGATAGATTCTTGCTTTTC--GTGATCGATGTCACCATTTTGACATTGTTATGCTCCTGGTTTGTCATGTTCTGCACAGG
ACTTTAGGTCGTC---AGTCATTACTTAGTCCAGTTTTATTCAGATCATCTACCTTGACACTCCAACAGATGTCATCTTT
CATTGATTCTTTTTGTATTGCACGTTACTAGAAGAAGAAGAAGAA-----------------------------------
----------------------------------AGTCTCTCTTGATTATTTTGAGAGGCACCTACTATGACGATGATGA
TGAAATATGAAATCATGTGTAAGCCTCTGGTTAAAGAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TAATGTACCATGTCAGCTAGTGTGTTCCAGTAACTTCAG
AAAGATTTAGCTGGAGCCAGTTCAAAAGTGGATTCTTGCGCGTTTCATGGTAGCCTTGGGCAACCTGTAGAGTCCCTCTC
CAAGTGTGAAAGAAATGCTCCAATGCCCTGCCTTCACGATGACAGCTTTAAAGCGAACCGATGCTGTGTGCTTTGTCATT
CACGGTGGAGAACAAAAGTTTGCCGTTGCTTGTAGAAATGAGAAAGGTACAGACGCATTATATAAGCTCCAGGATACA--
GAGAC----TGAAACCTCTCTACTCCCGAGCTCACCGAGAAGT---AAGTGGTGGCTGCACCTCCACAGTAGCAGTCTCC
TGTTCAGTTCTGCTCGCCGAGAAGCCAAGCCATGGCTGTAAGTTACTGGTCAGATCTTCTGTTTATTCAACAGTATGTAT
GTATGTATCC------------------------GAAGAACTACTGTGCCTATGGACATGGAAAGTTGATTTTATGGATG
GATGCTGGCAGGTGGTGGAGCTCAAGGTCGGGATGCACTGCGACAGGTGCATCAAGTCGATCAAGAAGGCGATCAAGACG
ATCGATGGTACGA---AAGCCTCTGACCCACTCGACAAAAGACAGTCTCACTTTCCATACTTGCAGTATATCTGTATATG
ATTAATTATTAACCTGGTTTGTG-
>chr3D_1
AGGCTGCACACTTCAACCAGCATGGGAGCA---TATGTCGTATCGCCA-TGCCTCCAAGCTTGACTGGTTCCGCCGGGCG
CACCAAGCCGAGCGCTTCCTCGAGTCCCGTCGGAGCGGCGCGCTACTGACGATGCGTCAACAGTCAAGATTGACTGCTAT
ACCATTCGCGAACAAGTCCTTTGCTCCCAACTCCCAAGGAAAGACCTTTGTCCCGTTGGTGCGGGTCAGATGCCCCGTAC
TTCAACTAACCTGCCGGCCGCTTTCCCCTACACTCAACAGAACCAGTTCATCGTAGGCCCGGCGCTTCCCCCCTCATTCT
GTTGTGCCCAGGATCCTTCGCGCCTGCTGCGATCTGGATTCGGATGATCAATCGAGCAGCTTTTCGTCCGGTTCTTCCTG
GATGATCCTCTATCTGGTTGGGGATTTTTCTTCGATCGGCTTGTCCTCTTAAGAGGTATGTTCAGTTCTGCTCCAGTTCG
CGCGCAT-----CTCTGTTCTT-----AGGCTTATGAATTGGATGGACACCATCTTGGTA-CGGACGTTCGATTTGGTGC
GGATCCTTTTTCTGCCTATGTATGCTTTTGAGGCTCAGAAGAGGAAATAC--CTGTTACGACAAAGAAATCTCATACATG
TTGTATGTTGGCG--GTTTCTTCACAACTGAATATGTTTTTCTCTTCTGATTAATAAGATTTCTGAGACGCGAAATTTTC
CACCTTTAGGACATATGCTTGGTTTATTAAGAATCTGCAGTGGTCAGTGTTCTACTTCTGAATTCCAATGA---------
-----AGAACAATATTTGCG-----ACGTAATTGTAGATTTGGAGAATTTGCTAA--TACATTGGATTGCTCACTGGATT
TCTGTCAATAGCTTC-ATCCTCATATGCATATTTCTGGTTCCGCTAG-----------TA-----------CTTGATACC
ATAAATCCACGGTTCTGACCCTCTCTTTTCTGTACCTTTCATAGCAGAAAGAACGCTGCAATTTCTTTGACACACATCTC
CAAGTTCATCATTCTCTGTCTCTGCTCAACCAATAAT-ACAGACTTCAGTCACACATAAAGAAATGGGTCACACCATTGG
AGTTGCAGATGATGAAATAGCAGACATACCATGTTCAGATGC---TTCACCAATTCTGACCGAATATCACATCACAGTCC
CTACCCTTCACGATGGACTAATGCAAGGGGCAGACCAGCACGAGAGACGGCTTCTGGATGTCCTCAAAGCAACGCCTTCA
GTGCAATGGCTGAAGGACATCAACGTCTGCGGTCCACTGGGAAAAATTCAGCTGCCATCGATCGGCGTCCACCGCTACCT
CCATGTCCACTTCATCAGAACAGTCGACTGGAGCTCACTGCTCGCCATCTGCAAGAACCACCTCAAGCATCCTCTCAACA
TCGCCCTACTCATCTGGCTGCTCTGCGTCGCCGCCGCCGGCGCCATGCTAGGACTGCTCCTGTTGGGGCTGCTGAACAAG
GCATTCCCTTCCAGGGCCTTGAGGCACCACTGGATAGAGATCGACAACCAGATCCTCAACGCCCTCTTCACGCTCATGAG
CATCTACCAGCATCCCATCCTCGTCCACCACCTCGTTCTCCTCTGCCGGTGGCGGCCGGAGGACGCCGCCCAGCTAAGGA
AGGTGTACTGCAAGAATGGCGCCCGCCGTCCCAACGAGCGAGCGCACATGTCCTTCGTGGTGGCCCTCCTCCACGTCACC
TGCATCTCGCAGTACATGGAGTGCAGCCTCTACTGGGGCTACCCAAGCAGGTCGCGCTCCGAGCTCGCGGAGAACTTCTT
CTTCATCCTCGGCGTCGCCGCGCCGGTCGTCGCCGGCGCTCACGCGGTGTACAGCCCTCTAGGCAGAGACGACGACGC--
-CGCCGCCGCCTCCTGCGAAGAGACCAAGCAGCTCCAC---------GCAGCCGGAGCCGAAGAATCGCCGGAAGAAATG
ACGGTGGTCGGCAACCCGATGTGGGCGGGGGAGCTGCTGGACTGCGGCGAGGACCCGGCGGCGTGCTACCTGTCGTTCCT
CTGCACCTTCTGCGTGTTCGGCTGGAACATGGAGCGGCTGGGGCTGGGCAACATGTACATGCACACGGCCATGTTCCTGC
TGCTGTGCGTCGCGCCCTTCTGGGTGTTCAACGTCACGGCGCTCAGCATCCACGACTACGCCCTCAGCGATGCCTTCGGC
GCCGCCGGGGTGGTGCTCTGCTTCCTCGGGCTCCTGTACGGGGGCTTCTGGAGGATGCAGATGAGGAAGCGGCTCGGGCT
GCCCCGGAGCAGGTGGTGCTGCGGCTCGTCGTCGCTGACGGACTACGCGCAGTGGCTCCTCTGCTGGCCGTGCGCGCTCG
CGCAGGAGGTGCGCACGGCGAACCTGTACGACCCGAGGGGCGACGGCGGTTTCTACGGGAAGCTGGTGGACGGCGGTGAC
CCGGAGCGAGGGCCGGACGTGCCGGTCTCCGCTGAAGTGCAGGAGGTGGTCGGCGGTGTTGTCAATCCGACGGTGGACGG
CGAGATGATCCCGCCCGTGCAGCCGGTGGTGGAGTCTGGACGGCAGAGGCAAGCCGGCCACGAAGAAATTGTTGCAAATG
GCAGTAGCGTCCAGCTCAAAAGTTGACCGCAGCTGTTGGATGGTGACTGATGCTGTAGAG-TATTCGCAA----GCTGAC
GGATATATTCTTCCTTTTTGGGGGATCGATGTCACCATTTTGACATTGTTATGCTCCTGGTTTGTCATGCTCTGCACGGG
ACTTTAGGTCGTTATAAGTCATTAGTTAGTCCAGTTTTATTCAGATCAGCTACCTTGACACTCCAACAGATGTCATCTTT
CATCGATTCTTTTCGTATTGCACGTTACTGGAAGAAGAAGAAGAA-----------------------------------
----------------------------------AGCCTCTCGTGATTATTTTGAGAGGCTCCTACTATGACGATGATGA
TGCAATATAAAATCATGCGTAAGCCTCTGGGCAAAGAATAAGGGCATGTACAATGATGGCATATGGATACAGATGCCCCA
TGACAAAAAGTAGTTTGAGGCATCTACATTTATTTTTTCTCCTCAATGCAAGCTACCATTAGTGGGCCTCATTAAGAAAT
AGAAAATAAAGACTTTAGTACACATGCATCTCTATTTTTCACTCCAACCTTTTCAGCTTTTGATCCCGGACCACACTTTT
CCTCTCCAAGCACCTGCCTCCTCGAGAGGATCCCGCTTTCCTATCCGAACCTACTTTACGTCATATCCGATCCTACATGG
CATGCGAGGCATCACCCTGAGGCTATGCATTGTACATGCCCTAATGTACCATGTCATCTAGTGTGTTCCAGTAACTCCAG
AAAGATTTAGCTGGACCCAGTTCAAAAGTAGATTCTTGCGCGTTTCATGGTAGCCTTGGGCAACCTGTGGAGTCCCTCTC
CGAGTGTGAAAGAAATGCTCAAACGCCCTGCCTTCACGATGACAGCTTTAAAGCGAACCGATGCTATGTGCTTTGTCGTT
CACGGTGGAGAACAAAAGTTCGCCGTTGCTTGTGGAAAAGAGAAAGGTTCAGACGCAGTATATAAGCTCCAGGATACA--
GAGAGACTGTGAAACCTCTCCACTTCAGACTTCAGAGCTGCCTGGGAAGTGGTGGCTGCACCTGCACAGTAGCAGTCTCC
TGTTCAGTTCTACTCGCCGAGAAACCAAGCCATGGCTGTAAGTTACTGGTCAGATCTTCTGTTTATTCAACAGTATGTAT
GC------------------------ATGTATCTGAAGAACTACTGTGCGTATAGAAATGGAAAGTTGATTTCATGGATG
GATGCTTGCAGGTGGTGGAGTTGAAGGTCGGGATGCACTGCGACAGGTGCATCAAGTCGATCAAGAAGGCGATCAAAACG
ATCGATGGTACGA---AAGCCTCTGATCCACTCGACAAAACACAGCCTCACTTTCCATACTTTGCA-------GTATATG
GTTAATTATTAACCCTGGTTTGTG
>chr3A_37
------------------------------------GTCGTATCGCCA-TGCCTCCAAGCTTGACTGGTTCCGTCGGGCG
CACCAAGCCGAGCGCTTCCTCGAGTCCCGTCGGAGCGGCGCGCTACTGACGACGAGTCAACAGTCAAGATTGACTGCTAT
ACCATTCGCGATCAAGTCCATTGCTCCCAACTCCCAAGGAAAGACCTTTGTCCCGTTGGTGCGGGTCAGATACCCCGTAC
TTCAACTAACCTGCCGGCCGCTTTCCCCTACACTCAACAGAAGCAGTTCATCGGAGGCCCGACGCTTCCCCCCTCATTCA
GTTGCGCCTAGGATTCTTCACGCCTGCTGCGATCTGAATTCGGATGATCAAATCGAGAAG--------------TTCTTG
GGTGATCCTCTG------------------TTCGATTGGCTTCTCCTCTTGAGAGGTACTC-CAGTTCTGCTCCAATTCG
TGCCCTGCATACCTGTGTTCTT-----AGGTTTATGGATTGGGCGACCAT----TTGGTA-CGGCTGTTTGATTTGGTGC
GAGTCCTTTTGCGCC-----TGTGCCTTTGAGGTTCGGAACAAGAAATTGATCTGCTATGATAAGGAAATCTCATACATG
TTGGCGATTTCCATAGTTTCTGCACAACTGAATATGTG-TTCTCTTCCGATTAATAAGATCTCTGAAACGCGAAATTTCC
CACTTCTAGAACATATGTTAGGTTGATTAAGAATCTGTGGTGGTCAGTGAGCACATGCTACCTCTGATTAAGAACATCTG
ATTCCAGAACAATATTTGTG-----GCCTAACTGTAGATTTGGAGAATTTGC-----TACATTGAAAATCTCACTGGATT
TACATCAAAATCTTCCAT-CTCACATGCATATTTCAGGTTCCACCAGTATGATCATCCTA-----------CTTGATGCC
AGAAATCCAGGGTTCTAACCCTGTCTTTTTTTGTACTTTTATAGCAGAAAGATTACTGCAATACGCCAG-------TCTT
CAAGTTCATCATCCTGTGTCTTTGCGTAATCAAATAGCACAGATTTCATTCACACGAAAAAAGATGGGTCACACT-----
-GTTGCCGAGGATGACATAGAAGACATACCAAGTTCAGATGCAAATTCACCAATTCTGACTGAACATCACATCACAGTCC
CAACCCTTCACGACGGACTAATGCAAGGGGAACACCAACACGAGAGACGGCTTCTGGATTTCCTGAAGGCAACGCCTTCA
GTGCAATGGCTGAAGGACATCAACGTCTGCGCGCCACTGGGGAAAATTCAGCTGCCATCGATCGGCGTCCACCGCTACCT
CCATGTCCACTTCATCAGAACAGTCGACTGGAGCTCACTGCTCGCCATCTGCAAGAACCACCTCAAGCATCCTCTCAACA
TCGCCCTGCTCATCTGGCTGCTCTGCGTCGCCGCCGCCGGCGCCATGCTAGGACTGCTCCTGTTGGGGCTGCTGAACAAG
GCATTCCCTTCCAGGGCCTTGAGACACCACTGGATAGAGATCGACAACCAGATCCTCAACGCTCTCTTCACGCTCATGAG
CATCTACCAGCACCCCATCCTCGTCCACCACCTCGTTCTCCTCTGCCGGTGGCGGCCGGAGGACGCCGCCCAGCTAAGGA
AGTTGTACTGCAAGAATGGCGCCCGCCGTCCCAACGAGCGAGCGCACATGTCCTTCGTGGTGGCCCTCCTCCACGTCACC
TGCATTTCGCAGTACATGGAGTGCAGCCTCTACTGGGGCTACCCAAGCAGGTCACGCTCCGAGTTCGCGGAGAACTTCTT
CTTCATCCTCGGCGTCTCCGCGCCTGTCGTCGCCGGCGCCCACATGGTGTACAGCCCTCTAGGCAGAGACGACGACGACG
ACGCTGCCGCCTCCTGCGAGGAAACCAAGCAGCTCCACCTCCACGCAGCAGCCGGAGCCGAAGAATCGCCGGAGGAAAGG
ACGGCGGTCGGCAACCCGATGTGGGCGGGGGAGCTGCTGGACTGCGGCGAGGACCCGGCGGCGTGCTACCTGTCGTTCCT
GTGCACGTTCTGCGTGTTCGGCTGGAACATGGAGCGGCTCGGGCTGGGCAACATGTACGTGCACACCGCCATGTTCCTGC
TGCTGTGCGTCGCGCCCTTCTGGGTGTTCAACGTCACGGCGCTCAGCATCCACGACTACGTCCTCAGCGACGCCTTCGGC
GCCGCCGGGGTGGTGCTCTGCTTCCTCGGCCTCCTGTACGGCGGGTTCTGGAGGATCCAGATGAGGAAGCGGCTCGGGCT
GCCCCGGAGCAGGTGGTGCTGCGGCTCGTCGTCGCTGACGGACTACGCGCAGTGGCTCCTCTGCTGGCCGTGCGCGCTCG
CGCAGGAGGTGCGCACGGCGAACCTGTACGGCCTGAGGGACGACGGCGGTTTCTACGGGAAGCTGGTGGACGGCGGTGAC
CCGGAGCGAGGGCCGGACGTGCCGGTCTCCGTTGGGGTGCGCGAGGGGATCGATGCTGCCGTCCATCTCGCGGTGGACGG
AGAGATGATCCCGCCCGTCCAGCCGGTGGTAGAGTCTGGACGGCAGAGGCAAGCCGGCGACGAAGAAATTGTTGCAAATG
GCAGTAGCGTCCAGCTCAAAAGTTGACCGC--------GATGGTGACTGATATTGTATAG-TATGCAAAAGCTTGCTGAC
GGATAGATTCTTCCTTCTC--GGGATCGATGTCACCATTTTGACATTGTTATGCCCCTGGTTTGTCATGCTCCGCACAGG
ACTTTAGGTCGTC---AGTCATTAGTTAGTCCAGTTTTATTCAGAACAGCTACCTTGACACTCCAACAGATGTCATCTTT
CATCGATTCTTTTCGTGTTGCACGTTACTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTCTCTCGTGATTATTTTGAGAGGCTCCTACTATGACGACGATGA
TGAAATATAAAATCATGTGTAAGCCTCTGGTTAAAGAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TAATGTACTAGGTCAGCTAGTGTGTTCCAGTAACTTCAG
AAAGATTTAGCTGGAGCCGGTTCAAAAGTAGATTCTTGCGCGTTACATGGTAACCTTGGGCAACCTGTGGAGTCCCTCTC
CGAGTGTGAAAGAAATGCTCCAATGCCCTGCCTATGCGATGACAGCTTTAAAGCGAACCGATGCTATGTGCTTTGTCATT
CACGGTGGAGAACAAAAGTTTGCCGTTGCTTGTGGAAAAGAGAAAGGTTCAGACGCAGTATATAAGCTCCAGGATACAGA
GAGAC----TGAAAC--CTCTACTTCAGACTTCAGAGCTGCCTGGGAAGTGGTGGCTGCACCTGCACAGTACCAGTCTCC
TGTTCAGTTCTGCTCGCCGAGAAGCCAAGCCATGGCTGTAAGTTATTAGTCAGATCTTCTGTTTATTCGACAGTATGTAT
GTATGTATGTATGTATGTATGTATGTATGTATGTGAAGAACTACTGTGCTTATGGAAATGGAAAGTTGATTTCATGGATG
GATGCTTGCAGGTGGTGGAGCTGAAGGTCGGGATGCACTGCGACAGGTGCATCAAGTCGATCAAGAAGGCGATCAAGACG
ATCGATGGTACGACGAAAGCCTTCGATCCACTCGACATAAAACAGTCTCACTTTCTGCAG-TTGCA-------GTATATG
ATTAA--ATTAACCCTGGTTTGTG
>SNPs
---------S--------------------SSS---------------S----------------------S--------
------------------------------------------------------------S--------S----------
--S---------S---------SSS-S-SSSSS--S-------------------------S------------------
----------------S----------------------------------------S--S-------------------
---------------------------------------------------------S------S----S----------
--------------S-------------S-------------------S------------------S----SS------
--S---S---------------SSSSS-S-----------------S---------S-SSS-------------------
-----------S-----------------------------------S-SS-S-S-SS---------------------S
SS--S-------S------S----S------S------------------------S--------------S-------S
-------S--S----SSS-SSSS---SS-S--------------------------------------S-SS-----S-S
--------------------SSSSS-----------SS----------------SSS------------S----------
----------------------S-------------------------------------SSSSSSSSSSS---------
----------S--------------S----SSS------------------------S-------S--S--S----S---
----------------------------------------------------------S----------S----------
------------S-------------------S-------------S--------S------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------S----------------------------------
---------------------S--------------------------------------------------S-------
-------------------------------------------------S--S-----------------------S---
-----------------SS-------------------------------------------S-----------------
-----------------------------------------------------S----------------S--S----S-
--------------------------------------------------------------------------S-S--S
--------------------------------------------------------------------S-----------
------------------------------------------S----------------------------------S--
-----------------------S--------------S---------------------------------------S-
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------S-----------------------------
----------------------------S-------S-------------------------------------------
-----------------------------------------------------------S--------------------
-----------------S----------------S------------------------SS-------------------
------------S---------S----------------------------------------------S----------
------------------------S-----------------------S-------------------------------
---S---------S------------------------------------------------------------------
------------------------------------------S-----------------S-------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------S-----------
-S---------------------------------------------------------------S--------------
---------------------------------S----S---------S--------S----------------------
------------------------S-S--SS---SS-SSSSS---------------------S----------------
--------------------------------------------------------------------------------
--------SS---------------------------------------S------S---------------S-------
------S---------------S---------------------------------------------------------
--------------------------S-------------S---------------------SSSSSSSSSSS-------
--------------SS-S--SSS-
>forward_449
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTTCGATCGGCTTCTCCTCC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_1433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCTCAACA
TCGCCCTACTCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_572
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTTGGTGC
GGGTCCTTTTGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_2451
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CTCTACGGGAAGCTGGTGGA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_1433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGAACCACCTCAAGCATCCC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3715
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CCGAGAAGTAAGTGGTGGCT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
