>input_sequence_48650
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-------------------------------------------------------------ATGGCGTGTCCACCACACG
CCATCGTCATCCCCTACCCGGCGCAGGGCCATGTCATCCCACTCATGGAGGTCGCGCACGCGCTGGCTGACAGGGGCTTC
AACGTCACCTTCGTCAACACCGAGTTCAACCACGCCCGTGTCGTCGCCGCCATGTCGAACGGTGCCGGCAGTGGGCTGGG
CCGGATCCGGCTCGTGGAGGTGCCGGATGGCATGGCCCCTGGGGAGGACCGGAACCAGCTGGTGAGGCTGACCATACTCA
TGGCGGAGTTCATGGCGCCGCGGGTGGAGGAGCTCATTCTCCGGAGCGGCGA------------GGACGGCGCGTGCCCG
GGCAAGATCACGTGCATGGTGACGGACTACAACGTCGGGTATTGGGCGGTGGACATTGCGCGAAGGACAGGGATCCGGGT
GGGGGCCGTTTGGCCGGCGTCGGCCGCCGTCATGGTCACCCTGCTGAGCTTCCCCAAGCTGATCGAGGACAACATCATCG
ATGCGGAAGATGGTAAA-CTGACCGAGCAACTTGTTTGACTTCTCT---TACATTATTTACTGAC--AAGTTCGTCTTTG
CATGCAGGATCTACAGTGGGTGAGGGAACGTTCCAGCTGAGCCCCGACATGCCTGTCATGCACAGCGCCCACCTCGCATG
GAACTGCATCGGCGACCACGACCAGCAGGCGACCCTCTACCGGCTCCTTGTCGACGGCGTTCGTGCAATGGAGCAGTGCG
ACTTCGTCATCTGCAACTCCTTCCAGGACGCGGAGCCGGCGTCTTTCAAGCTCTTCCCCAACGTCCTTCCCGTTGGCCCA
ATACTCACCGGCGAGCGCAGCGGCAAGGCCGTCGGCCACTTCTGGCAGCCGGAGGACGACGAGTGCATGTCCTGGCTCGA
CACGCAGCCGGAGAGATCCGTAGTGTACGTGGCCTTCGGCAGCTTCACCATGTTCGACCGGCGCCAGTTCGAGGAACTCG
CGCTGGGGCTCGAGCTCTCGGGCCGGCCGTTCCTGTGGGTCGTGCGCCCGGACATCGGCCACGGCGCCGTCCACGACTAC
CCGGAGGGCTTCCTGGATCGCGTTTGCGGTGTCGGCGGCCAAGGCAAGCTCGTCTCCTGGTCACCGCAGCAGCGTGTGCT
AGCGCACCCGGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCCACCATGGAGGGCGTCCGGAACAGCGTGCCGT
TCCTGGCCTGGCCCTACTTCGCCGACCAGTTCGTGAACCAGGTGTACATCTCCGACGTGTGGAAGGTCGGCCTCAAGGCC
GTCGCCGACGACTCAGGAGTCATAACCAAGGAGCACATCGCCGGCAGGGTGGAGGAGCTGATGGGGGACGCCGGCATGAG
GGAGAGGGTGGAGGCCATGAAGAAGGCCGCGCACCAGAGCATTCAGGAAGGGGGCTCCTCGCACGGAAACTTTGATGCTT
TCGCGGAGGCCATGAAGAATGCGGCGCCACAGGAAGTGAGCGTTCAGGACGGGGGCGCCTCACCCGGAAACTTCCATACT
CTTGCGGACGGCATGAAGGCATGA--------------------------------------------------------
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>chr1B_1_TraesCS1B01G062100
ATGATGGAGGGGAAATTGCTGGATCCATTAGGGTGGTCTCACTTGTATCAAGGTGAGAAA--------------------
-AATGTGAATCCAACATAA----GTATACCAGC-AAGGGTAATTGTTGGTCAAAGCTCGCATTGGCAAGGCGTAATCTGC
AAGGTATTTCAGAACAGAGGGAGTAGTACTGTTTTCAAGCAAGTGTGGAGGGAGCAGAAGAACCATCG------------
----------------------------------------------------------------CCTTGAGACGATAAAT
GATGATACACGTAACATAACATCTTGAGCAAACACATGATTCATTTTGCAGTACATATTTTTGTCCGTTATATTTTATAT
CGGTCGAATGTTCCGAGCTGGATAGGCTAGGTAGTGTTACTCAAGGATCAACTTACTATTGA------------------
--------------------------------------------------------------------------------
-----AAAATAAAATAGGTAAAATGTGGTACAAAGTTTTAAATGGGGTAAAATTGATTAAAATTTCTTAAATGAGGCAAT
CCCTGTCAAAAATGACAAAAGATGGGATAAAAAAGTAGATT--TTTTTTTCCATACGCCTCCCA--------GCTGGGAG
CCAGGTTCCATTATGTCATCTTGGGCGAAGTTAATTGTTGCTTCTTACTTGGCATATATGCAGCAAACTATCGTCG---T
GAAGACTTGGTAAAAGAACTAGCTAGCTTCTAGTAAACCACTGA-------AGTTGTCGAGTTGCCAAGTGTGTTTATCT
CCTATGCTTTTAAAAAACTATGCCTCGACAGTCACAAGAAACTCTCCAACGAATCAAATGCAAGTACAATGCCTGATCAT
AAAATACAAGTAGAATGCCAGACCATAACTATTCTTCTTGCTGTGCAAACCCCAACAAGAAACCCCAACAAGAACCAGCT
CAATTTTTTAGAAGGTCCAAGAACGAGATTAACCACTGGAGCAACAAGAATTATACCTTCTTCTTGGCTCTTGGTGCGTG
TCTCCACACTCTCT---TCTCCCACTATAAATTCTGCCGGTCATT---------------------ACACAGCATCGACA
GCTACT-------AG-CTAGGATCACCGCTGCCAAG----ATCTCAGTTATAATTACGTCAATGGCGTGTCCACCACACG
CCATCGTCATCCCCTACCCGGCGCAGGGCCATGTCATCCCACTCATGGAGGTCGCGCACGCGCTGGCTGACAGGGGCTTC
AACGTCACCTTCGTCAACACCGAGTTCAACCACGCCCGTGTCGTCGCCGCCATGTCGAACGGTGCCGGCAGTGGGCTGGG
CCGGATCCGGCTCGTGGAGGTGCCGGATGGCATGGCCCCTGGGGAGGACCGGAACCAGCTGGTGAGGCTGACCATACTCA
TGGCGGAGTTCATGGCGCCGCGGGTGGAGGAGCTCATTCTCCGGAGCGGCGA------------GGACGGCGCGTGCCCG
GGCAAGATCACGTGCATGGTGACGGACTACAACGTCGGGTATTGGGCGGTGGACATTGCGCGAAGGACAGGGATCCGGGT
GGGGGCCGTTTGGCCGGCGTCGGCCGCCGTCATGGTCACCCTGCTGAGCTTCCCCAAGCTGATCGAGGACAACATCATCG
ATGCGGAAGATGGTAAA-CTGACCGAGCAACTTGTTTGACTTCTCT---TACATTATTTACTGAC--AAGTTCGTCTTTG
CATGCAGGATCTACAGTGGGTGAGGGAACGTTCCAGCTGAGCCCCGACATGCCTGTCATGCACAGCGCCCACCTCGCATG
GAACTGCATCGGCGACCACGACCAGCAGGCGACCCTCTACCGGCTCCTTGTCGACGGCGTTCGTGCAATGGAGCAGTGCG
ACTTCGTCATCTGCAACTCCTTCCAGGACGCGGAGCCGGCGTCTTTCAAGCTCTTCCCCAACGTCCTTCCCGTTGGCCCA
ATACTCACCGGCGAGCGCAGCGGCAAGGCCGTCGGCCACTTCTGGCAGCCGGAGGACGACGAGTGCATGTCCTGGCTCGA
CACGCAGCCGGAGAGATCCGTAGTGTACGTGGCCTTCGGCAGCTTCACCATGTTCGACCGGCGCCAGTTCGAGGAACTCG
CGCTGGGGCTCGAGCTCTCGGGCCGGCCGTTCCTGTGGGTCGTGCGCCCGGACATCGGCCACGGCGCCGTCCACGACTAC
CCGGAGGGCTTCCTGGATCGCGTTTGCGGTGTCGGCGGCCAAGGCAAGCTCGTCTCCTGGTCACCGCAGCAGCGTGTGCT
AGCGCACCCGGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCCACCATGGAGGGCGTCCGGAACAGCGTGCCGT
TCCTGGCCTGGCCCTACTTCGCCGACCAGTTCGTGAACCAGGTGTACATCTCCGACGTGTGGAAGGTCGGCCTCAAGGCC
GTCGCCGACGACTCAGGAGTCATAACCAAGGAGCACATCGCCGGCAGGGTGGAGGAGCTGATGGGGGACGCCGGCATGAG
GGAGAGGGTGGAGGCCATGAAGAAGGCCGCGCACCAGAGCATTCAGGAAGGGGGCTCCTCGCACGGAAACTTTGATGCTT
TCGCGGAGGCCATGAAGAATGCGGCGCCACAGGAAGTGAGCGTTCAGGACGGGGGCGCCTCACCCGGAAACTTCCATACT
CTTGCGGACGGCATGAAGGCATGATCATCTGCTGCTCGAGTGTATGTGTGGTA--GTGTGCAATTTTGTGTTCACACAAA
GAATAAAAATGGTTTAACCATCACCATTTGCCTTTATATTTGCCGCTGTTGTCTTTGTGAGTTACTTCGGGACGGAGGGT
AAC-------------------------------------------------------ATAAGACGATTTTTGACACTGT
CGGACTCTAAACACATCTTACAAAAAGT-----------TACCTGAGAATTTTGGATGCGTCCGTAGATAACATGATGAA
GAGCAGCAACATACGTAGCCCCAAGGCCAAGACAGGGAGGCCGCGGCGAGGACTTGCCAGGAACTAAACGGAGGCAGGAT
GTCAGCCACTTCCTATTCTACGCTTAAAGCACAAGTTATAGCTGTAACGGTACACAGCGCACACACCACCTAAT---CGC
TTGCGTAGTGAGCCGGCCCATGCGGAAT-TTTTTCCGCTGGTTTTTGGAAGGTTCCCCCAGTTTTCTGGTGCGGTTTTTT
CTGTGGTTTATTTTAGAACGGTTTCTATTCGGTTTTCCTTTTTCTTTTTCTTCTTTTTTTCTTCTCTTAATTCGTGA---
TTTTTTTCAAATTCATGATATATTCTCAAATTCATGAGCCTTTTTTATAACCTAAAATTACTTTTAAATTTATGAACTTT
TTTTAAATCCACAACTCCTTTCCAAATCTGTGAGTATCTTTTAAATCCGCAAACTTTTTT--GAAATGAATGAACTTTTT
AAAATCCACAACTCTTTTCCAAATCCGTGGTTTTTTCAGTG-GTGAACTACTAAAACAGTAAAGATACGATAAACTAGCC
ATGTTGA-ATCAATGTGAAGTGGCAGCCCATTAAATAAGCAGATTTATTTTTGATCAAGATTGCTTTTCACACAAAAACT
TGACAGGAAGGGGAAGGAAGGAGGGGAGGGTCC---------------------------------------------GA
GATGCTGCTGCTCCTGCTACTGCAAGCTTCTGGTCCTCTATAGGGAGGTCGGGGCGCCGCATCGGAAGGCCGGCAATAGG
GCGCAGGTGGAGCCCATGATGGCCCTCG
>chr1A_1
ATGACGGAGGGAAAATTGCTGGATCCATTAGGGTGGTCTCACCCGTATC-AGGTGAGAATGACAAAA-GTAAGTACTTTT
GAATGTGCATCCAA---AA----GTATACTAGC-AGGGGTAATTGTTGGCCAAAGCTCGCGTTGCGGCA-CGTAATCTGC
AAGGTATTCCAGACAGGAGGGCGTAGTAACGTTTCAT---AAGTCTGGAGGGAGCAAAAGAACCGTCGCCTGCTTTGCAA
GAATGTTTTGTATTCA------------------------------------------TTATCTCCTTGAGACAATAAAT
CATGATACACGTAAC-----ATCTTGAGCAAACACATGATTCATTTTGCAGTACATATTTTTGTCCGTTATATTTTATAT
CGGTCGAATGTTCCGAGCTGCGTATGCTAGGCAGTGTTACCCAAGGATCAACTTACTATTGAAACCAGACAGCACGCACC
ATGTACATGTACCCAAAAATCGGCATGTCGTCGGAGTTCAACCTATAATTTGCGCGGCGTAGGTAGAAGTACCTGAAATG
CTCAAAAAATAAAACAGATAAAATGTGGTACACAGCTTTAAATGGGGTAAAATTGATATAAATTGCTTAAATGAGGTAAT
CCCTGTCAAAAATGACAAAAGATGGGACAAAAAAATAGATTCCTTTTGTTCCATACGCCTCCCAGGCTCCCAGCTGGGAG
CCAGGTTCCATTACGTCATCTTGGGCGAAGTT-ATTGTTGCTTCTTACTTGGCATATATGCAGCAAACTATCCTCG---T
GAAGACTTGGTAAAAGAACTAGCTTCTAGTAGAGCCACTGAACAGCACCTCAGTTGTCGAGTTGCCAAATGTGTTTATCT
CCTATGCTTCTAAAAAACTATGCCTCGACAGTCACAAGAAACTCTCCAACGAATCAAATGCAAGTACAATGCCTGATCAT
AAAATACAAGCACAATGCCAGACCCTAACTATTCTTCTTGCTGTGCAAACCCC-------------AACAAGAACCGGCT
CAATTTTTTAGAAGATCCAAGAACGAGATTAGTCGCTGGAGCAACAAGAATTATACCTTCTTCGTGGCTCTTGGTGCGTG
TCTCCACACTTAGCA----TCTCACTATAAATTCTGCTGGTCACTCATTCGGGTGATATAACAACCACACAGCATCGACA
GCTACT-------AACCTGGAATCACCGGGGCGTGA----ATCTCAGTTATTTAG--GTCAATGGCGTGTCCACCGCACG
CGATCGTCATCCCCTACCCGGCACAGGGCCACGTCATCCCGCTCATGGAGGTCGCGCACGCGCTGGCCGACAGGGGCTTC
AACGTCACCTTCGTCAACACCGAGTTCAACCACGCCCGTGTCGTCGCCTCCATGTCGAACGGCGCCGGCAGCGGCCTGGG
CCGGATCCGGCTCGTGGCGGTGCCGGATGGCATGGCCCCCGGGGAGGACCGGAACCAGCTGGTGAAGTTGACCATACTCA
TGGCGGAGTTCATGGCGCCGCGGGTGGAGGAGCTCATTCTCCGGAGCGGCGAGGCGGCGGTGCTGGACGGCGCGTGCCCG
GGCAAGATCACCTGCATGGTCACGGACTACAACGTCGGGTATTGGGCGGTGGACATTGCTCGGAGGACCGGGATCCGGGT
GGGGGCCGTTTGGCCGGCGTCAGCCGCCGTCATGGTCACCTTGCTGAGCTTTCCTAAGCTGATTGAGGACAACATCATCG
ATGCGGAAGATGGTATAGCTGATCGAGCAACTTATTTGACTTCTCT---TACATTATTTACTGAC--CAGTTCGTATTTG
CATGCAGGGTCTACAGTGGGTGAAGGAACATTCCAGCTGAGCCCCGACATGCCTCTCATGCACAGCGCCCACCTCGCATG
GAACTGCATCGGCGACCACGACCAGCAGGCGACCCTCTACCGGCTCCTTTGTGACGGCGTCCGCGCAATGGAGCAGTGCG
ACTTCGTCATCTGCAACTCCTTCCAGGACGCGGAGCCGGCATCTTTCAAACTCTTCCCCAACGTCCTCCCCGTTGGCCCG
CTCCTCACCGGCGAGCGCAGCGGCAAGGCCGTCGGCCACTTCTGGCAGCCGGAGGACGACGAGTGCATGTCCTGGCTCGA
CGCGCAGCCAGAGAGATCCGTAGTGTACGTGGCCTTCGGCAGCTTCACCATGTTTAACCGGCGCCAGTTCGAGGAGCTCG
CGTTGGGGCTGGAGCTCTCCGGCAGGCCATTCCTGTGGGTCGTGCGCCCGGACATTGGGCACGGCGCAGTGCACGACTAC
CCGGAAGGCTACCTGGACCGGGTGTGCGGCCCCGGTGGCCAGGGCAAGCTCGTCTCCTGGTCGCCGCAGCAGCGCGTGCT
GGCGCACCCCGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCCACCATGGAGGGCGTTCGGAACGGCGTGCCGT
TCCTCGCCTGGCCCTACTTCGCCGACCAGTTCGTTAACCAGGTGTACATCTCCGATGTGTGGAAGGTCGGCCTCAAGGCC
GTCGCCAACGAGTCGGGAGTCATAACCAAGGAGCACATCGCCGGCAGGGTGGAGGAGCTGATGGGGGACCCCGGCATGAG
GGAGAGGGTGGAGGCCATGAAGAAGGGCGCACACGAGAGCATTCAGGAAGGTGGCTCCTCACATGGAAACTTCGATGCTT
TTGCGGAGGCCATGAAGAATGCAGCGCCTGA------GAGTGTTCAGGACGGGGGCTCCTCACATGGAAACTTCCACTCT
CTTGCGGAGGGTATGAAGGCATGATCATCTGGTGCTCGATTGTACGTGTGGTAGTGTGTGCAATTTTGCATTCCCAAACA
GAATAAAAA--GTTCGACCATAACCATTAGCCTCTATATTTGCTGCTTTTCTGT--------------------------
----------TCCGTCCCGAATTACTTTGTCGCAGAAATGGATCTGGATGGATGGAATATAAGACGTTTTTCGACACTGT
CAGACTCTAAACACATCTTAGAAAAAGTTACAGAGATAATACCTGAGAATTTTGGATGCGTCCGTAGATAACATGATGAG
GAGCAGCAGT----GTAGCCCCAAGGCCAAGACAGGGAGGCCGCGACGAGGCCTTGTCAGGAACTAAACGGAGGCAGGAT
GTCAGCCACTTCCTATTCTACGCTTAAAGCA----------CTGTAACGGTACACAGCGCACACACCACCTGAC---CGC
TTGCGTAGTGAGCCGGCCCATGTGGAATCTTTTTCCGCTGGTTTTTGGAAGGTTCCCCCAGTTTTTTGGTGCGGTTTTTT
CTGTGGTTTATTTTAGAACAGCTTTTATTCTATT----TTTTTCTTTTTCTTCTT-TTTTCTTCTCTTAATTTTTGAATT
TTTTTTTCAAATTCATGATATATTCATAAATTCATGAACTTCTTTTACATCCTAAAATTAATTTTAAATTCATGAAAC-T
TTTAAAATACACAAATCCTTTCCAAATCTGTGAATATTTTTGAAATCCACAAACTTTTTTTCAAAATGAATGAACTTTTT
AAG-TCCGCAACTCTTTTCCAAATCCGTGGTTTTTTCCAGTAGTGAACTACTAAAACAGTAAAGATACGACAAACTACCC
ATGTTGAAATCAATGTGAAGTGGTAGT-CATTAAATAAGCAGATTTATTCTCGATCAAGATTGCTTTT--CACAAGAACT
TGACAGGAAGGGGAAGGAAGGAGGGGAGGGCATACCTTGGACCTTGTCTAAGACCTGCAGCTCGTCAGGAATGAGTCGGA
GATGCTGCTGCTCCTGCTACTGCAAGCTTCCGGTCGTCTATAGGGAGGCTGGGGTGCCGCATCGAG-GGCCGGCAATAGG
GCGCAGATGGAGCCCATGATAGCCCTC-
>chr1D_1
ATGATGGAGGGGAAATTGCTGGATCCATTAGGGTGGTCTCACCTGTATCAAGGTGAGAATGACAAAAAGTAAGTACTTCT
GAATGTGAATCCAACATAATTAAGTATACCAGCAAGGGGTAATTGTTGGTCAAAGCTCGCATTGGCGAGGCGTAATCTGC
AAGGTATTTCAGAACAGAGGGAGTAGTAATGTTTCAT---AACTTTCA----AGCAGAAGAACCGTGGTCTGCTTTACAA
GAATGTTTTATATTCAGCTACTCCAGCGACATATATTTCGGTAGAGAGGGAGTATTTGTTATCTTCTTGAGAGAATAAAT
CATGATACACGTGAC-----ATCTTGAGCAAACACATGATTCATTTTGCAGTACATATTTTT-TCCGTTATATTTTGTAT
CAGTCGAATGTTCCGAGCTGTGTAGGCTAGGTAGTGTTACCCAAGGATCAACTTACTATTGAAACCAGACAGCACGCACC
AGGTACATGTACCCGAAAATCGGCATGTCGTCGGAGTTCAACCTAACTTGCGT--GGCTTAGGTAGAAGTACCTGAAATA
CTCAAAAAATAAAACCGATAAAATGTGGTTCAAAGTTTTAAATGGGGTAAAATTGATTAAAATTGCTTAAATGAGGTAAC
CCCTCTCAAAAATGACAAAAGATGGGACAAAAAAATAGATTC--TTTTTTCCACACGCCTCCCA--------GCTGGGAG
CCAGGTTCCATTACGTCATCTTGGGCGAAGTT-ATTGTTGCTTCTTACTTGGCATATATGCAGCAAACTATCCTCGTGAT
GAAGACTTGGTAAAAGAACTAGCTAGCTTCTAGTAAACCACTGA-------AGTTGTCGAGTTGCCAAGTGTGTTTATCT
CCTATGCTTCTAAAAAACTATGCCTCGACGGTCACAAGGAACTCTCCGACGAATCAAATGCAAGTACAATGCCTGATCAT
AAAATACAAGCAGAATGCCAGGCCCTAACAAG--------------AAACCCC-------------AACAAGAACCAGCT
CAGTTTTTCAGAAGATCCAAGAACGAGATTAGCCGCTGGAGCAACAAGAATCATTCCTTCTCTGTGGCTCTTGGTGCGTG
TCGTTCATTCTGCAGCATCTCTCACTATAAATTCTGCCGATCATTCACTCGGATGACATAACTG-----CAGCATCGACG
ACTACTTGTACGTAG-CTAGGATCGCCGCCGCCGAGCTAGATCTCAGTTATACTTGCGTCAATGGCGTGTCCACCGCACG
CGATCGTCATCCCCTACCCAGCGCAGGGGCACGTCATCCCGCTCATGGAGGTCGCGCACGCGCTGGCCGACAGGGGCTTC
AACGTCACCTTCGTCAACACCGAGTTCAACCACGCCCGTGTCGTCGCCTCCATGTCCAACGGCGCCGGCAGCGGGCTGGG
CCGGATCCGGCTCGTGGAGGTGCCGGACGGCATGGCCCCCAGGGAGGACCGGAACCAGCTGGTGAGGCTTACCATACTCA
TGGCAGAGTTCATGGCGCCGCGGGTGGAGGAGCTCATTCTCCGGAGCGGCGA------------GGACGGCGCGTGCCCG
GGCAAGATCACGTGCATGGTGACGGACTACAACGTCGGGTATTGGGCGGTTGACATTGCGCGGAGGACCGGGATCCGGGT
GGGGGCCGTTTGGCCGGCGTCGGCTGCCGTCATGGTCACCTTGCTCAGCTTTCCCAAGCTGATCGAGGACAACATCATCG
ATGCGGAAGATGGTAAA-CTGATCGAGCAACTTATTTGACTTCTCTTAGTACATTATTTACTGATCTCAGTTCGACTTTG
CATGCAGGGTCTACAGTGGGCGAGGGAACATTCCAGCTGAGCCCCGACATGCCTCTCATGCACAGCGCCCACCTCGCATG
GAACTGCATCGGCGACCACGACCAGCAGGCCACCCTCTACCGGCTCCTTTGTGACGGCGTCCGCGCAATGGAGCAGTGCG
ACTTCGTCATCTGCAACTCCTTCCAGGACGCGGAGCCGGCGTCTTTCAAACTCTTCCCCAACGTCCTCCCCGTTGGCCCG
CTCCTCACCGGCGAGCGCAGCGGCAAGGCCGTGGGCCACTTCTGGCAGCCGGAGGACGACGAGTGCATGTCCTGGCTCGA
CACGCAGCCAGAGAGATCCGTAGTGTACGTCGCCTTCGGCAGCTTCACCATGTTCCACCGGCGCCAATTCGAGGAGCTCG
CGCTGGGCCTAGAGCTCTCCGGCAGGCCATTCCTGTGGGTCGTGCGCCCGGACATCGGCCACGGAGCGGTGCACGACTAC
CCGGAAGGCTACCTGGACCGGGTGTGCGGCCCCGGTGGCCAGGGCAAGCTCGTCTCCTGGTCACCGCAGCAGCGCGTGCT
GGCGCACCCGGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCCACCATGGAGGGCGTCCGGAACGGCGTGCCTT
TCCTCGCCTGGCCCTACTTCGCCGACCAGTTCGTGAACCAGGTGTACATCTCCGACGTGTGGAAGGTCGGCCTCAAGGCC
GTCGCCGACGAGTCGGGGGTCATAACCAAGGAGCACATCGCTGGCAGGGTGGAGGAGCTGATGGGGGACGCCGGCATGAG
GGAGAGGGTGGAGGCCATGAAGAAGGGCGCACACGAGAGCATTCAGGAAGGCGGCTCCTCGCATGGAAACTTCGATGCTT
TTGCGGAGGCCATGAAGAATGCGGCGCCTGA------GAGCGTTCAGGACGGGGGCTCCTCACATGGAAACTTCCATACT
CTTGCAGACGGCATGAAGGCATGATCATCTGCTGCTTGAGTGTACGTGTGGTAGTGTGTGCAATTTTGCATTCCCACACA
GAATAAAAA--GTTCGACTATCACCATTTGCCTTTATATTTGCCGCTTTTCTGTTTGCGAGTAACTTCTGGACGGAGGAA
GTATACTCTCTCCGTCCCGAATTACTTATCGATAGAAATAGATATATCTAGAACTA------------------------
--------AAACAAATCTTACAAAAAGTTACAGAGATAGTACCTGAGAATTTTGCATGCGTCCGTAAATAACATGATGAA
GAGCAGCAATGTACGTAGCCCCAAGGCCAAGACAGGGAGG---------------------AACTAAACGGAGGCAGGAT
GTCAGCCACTTCCTATTCTACGCTTAAAGCACAAGTTATAGCTGGAACGGTACACAGCGCACACATCACCTAATCGTCGC
TTGCGTAGTGAGCCGGCCCATGTGGAAT-TTTTTCCGCTGGTTTTTGGAAGGTTCCCCCAGTTTTTTGGTGCGGTTTTTT
CTGTGGTTTATTTTAGAACGGCTTTTATTCAGTTTCCCTTTTCC------------TTTTCTTCTCTTAATTTGTGA---
TTTTTTTCAAATTCATGAACA--------------------TTTTTATACCCTCAATTTATTTTTAAATTCATGTTTTTT
TTTTAAATCCACAACTCCTTTCTAAATCGGTGAAT-TTTTTTAAATCCGCAAACTTTTCT--AAAATTAATGAATTTCTT
AAAATCCACAACTCTTTTCCAAATCCATGGTTTTTT-CAGTAGTGAGCTACTAAAACAGTAAAGATACGACAAACTAGCC
ATGTTGAGATCAATGTGAAGTGGCAGTCCATTAAATAAGCAGATTTATTTTCGGTCAAGATTGCTTTTCACACAAGAACT
TGACAGGAAGGGGAAGAAAGGAGGGGAGGG--------------------------------------------------
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>chr5D_1733
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-----------TGCAACTCGTTCCACGACGCCGAGGCCGGCGCGTTCAAGCTCTTCCCCAACATCCTCCCCATCGGCCCG
CTCTTCGCCGACAAGGGGTTCCAGAGGTCCGTCGGCAGCTTCTTGGCGGAGGACACGAGC---TGCCTCAAATGGCTGGA
CGCGCGACCTGACGGCTCCGTCGTGTACGTGGCCTTCGGGAGCATGGCCATCTTCGACCCGCGCCAGTTCGAGGAGCTGG
CCGAGGGGCTGGAGCTCACCGGCCGGCCGTTCCTGTGGGTAGTGCGCCCGGACTTCACCGCCGGCCTGAGCAAGGACTGG
CTCGACGAGTTCCAGCAGC---------GCGTCGCCGGCACCGGCATGATCGTCAGCTGGTGCTCTCAGCAGCAGGTCCT
TGCGCACCAAGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCGACCATGGAGGCGGTGAGAAATGGCGTGGCGG
TCCTGTGCTGGCCCTACTTCTGCGAGCAGTTCCTGGACCGGAGCTACATCACCGACGTGTGGAGGACCGGCCTC------
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>chr5B_1733
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-----------TGCAACTCCTTCCACGAGGCGGAGGTCGGCGCGTTCAAGCTCTTCCCCAACATCCTGCCCGTCGGCCCG
CTCTTCGCCGACGGGGAGTTCCAGAAACCCGTGGGCAACTTCTTGCCGGAGGACATGAGC---TGCCTCAAATGGCTGGA
CGCGCGACCTGACGGCTCCGTCGTCTACGTGGCCTTCGGCAGCATGGCCATCTTCGACCCGCGCCAGTTCCAGGAGCTGG
CCGAGGGGCTGGAGCTCGCCGGCCGGCCGTTCCTGTGGGTGGTGCGCCCGGACTTCACCCCCGGCCTGAGCAAGGCGTGG
CTCGCCGAGTTCCAGCAGC---------GCGTCGCCGGCACCGGCATGATCGTCAGCTGGTGCTCCCAGCAGCAGGTCCT
GGCGCACCGCGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCGACGATGGAGGCGACGAGGAACGGCGTGCCGG
TCCTGTGCTGGCCCTACTACTGTGAGCAGTTCCTGGACCGGAGCTACATCACCGACGTGTGGAGGACCGGCCTC------
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>chr5A_1733
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-----------TGCAACTCGTTCCACGACGCCGAGGCCGGCGCGTTCAAGCTCTTCCCCGACATCCTGCCCATCGGCCCG
CTCTTCGCCGACAAGGAGTTCCAGAGGTCCGTCGGCAACTTCTTGCCGGAGGACACTAGC---TGCCTCAAATGGCTGGA
CGCGCGACCTGACAGCTCCGTCGTGTACGTGGCCTTCGGGAGCATGGCCATCTTCGACCCACGCCAGTTCCAGGAGCTGG
CCGAGGGGCTGGAGCTCACCGGCCGGCCGTTCCTATGGGTCGTGCGCCCGGACTTCACCGCCGGCCTGAGCAAGGAATGG
CTCGAAGAGTTCAAGAAAC---------GCGTCGCCGGCATAGGCATGATCGTCAGCTGGTGCTCCCAGCAGCAGGTCCT
GGCGCACCGCGCGGTGGCGTGCTTCGTGTCGCACTGCGGGTGGAACTCGACGATGGAGGCGGTGAGGAATGGCGTGCCGG
TCCTGTGCTGGCCCTACTTCTGCGAGCAGTTCCTGGACCGGAGCTACGTCACCGACGTGTGGAGGACCGGCCTC------
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>SNPs
------------------------------------------S----------------S--------------------
-----------------------------------S------------------------------S-------------
----------------------------S-----SSSSSS----S-------------------S---------------
-------------------------------------------------------------------------S------
S--------------SSSSS------------------------------------------------------------
--------------------SS------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------S--S----------------------------------------------S-----------S---
---------------------------S------S---------------------------------------------
-------------S------------------S---------------------------------------S-------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
----------S-------------S----------------------------SSSSSSSSSSSSS--------------
--------------S----------------S--S----------------------------S----------------
----------SS-S-------S----------------------------------------------------------
-----------------------------S---S------------------S--S-------------------S----
-S-----------------------------S--------S--------------------------S------------
------------------------------------------------S-------------S--------S--------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----S-----------
----------------------------------------S----------S----------------------------
----------------------S----------S---------------------------------S------------
--------S--------------------S------------------------S-------------------------
-------------------------------------------------SSS--------S--S----------------
-------------------------------------------------------------------S-----------S
S-S-----------------------------------------------------------------------------
---------S-----------------------------------------------------------------S----
----------S--------S-----------------------------------------------S------------
-----S-----------S--S--S-----S--------------------------------------------S-----
S---------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-----------S--S-----------------------------------------------------------------
--------------------------S---S---S----------------S-----------S--------S-------
-S--------------------------SS-SSSSSS-------------------S------SS---------------
--------------------------------------------S-----------------------SS---S----S-
---------SS---SS-------------------------------S--S-S----S----S-----S---------SS
SSS---------------------------------------------------------------S----S--------
-S------------------------------------------------------------------------------
---------SS----------------------------------S-----S----S-----------------------
--------------------------------------------------------------------------------
----------------------S------------------------------------------S--------------
---------------------S--S-----S----S-------------------S----------------S-------
-------------------------SS----------S-S---------S----------S---------S-----S---
---------------------------------S---S------------------------S-----------------
-------------------------------------SSSS-----------------------------S---------
--------------------------S------------------------S-----------------------S----
------------------------------SSS-----------------------------------------------
------------------------------S----S------------SS----S---------SSS-------------
------S-------------S------S
>forward_314
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------------------------------------------------------AGAACCATCGCCTTGAGACG------
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>reverse_1348
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-------------------------------------------------------------------TGACAGGGGCTTC
AACGTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCTGTGCAAACCCCAACAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_2749
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACAGGAAGTGAGCGTTCAGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1870
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTACAGTGGGTGAGGGAACG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------
>reverse_2750
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------CAGGAAGTGAGCGTTCAGGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_2692
--------------------------------------------------------------------------------
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--------------------------------ACCAGAGCATTCAGGAAGGG----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_3876
--------------------------------------------------------------------------------
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-----------------------------------CTCTATAGGGAGGTCGGGGC-------------------------
----------------------------
