>input_sequence_48594
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---------ATGAAGGAGTACTGGACGATGCTGGCGTCGCTCATGGGCGCGCTGGCGTTCCTGCAAGGGGTGCTGCACGC
CGTGTTCCCGGCGGAGCTGCGGGCGGCGCTGGCCCGGCTGCTCGGGCGCCTCACCCGGGCCTTCTCCCCCTACTGCTACT
TCGACGTCACGGAGACGGACGGGATGAGCAACAACGAGATCTACGACGCCGTGCAGCTCTACCTCAGCAGTACGGCCGCG
CCGGCGTCGGGGGCCCGGCTCAGCCTCACGCGCCCGCACAACGCCACCTCCTTCACCTTCGGGCTCGCCGCCAGCGACCG
CGTCGTGGACGCCTTCCGCGGCGCGGCCGTCACGTGGGAGCACGTGGTGGCGCCGCGCCAGTCCCCCGGCTTCTCCTGGC
GCCCGCTCCCCGAGGAGAAGCGCCGGTTCACGCTCCGGATCCGCCGCGGCGACCGGGAGAAGCTGCTGCCGGCCTACCTC
GACCACATCCTCGCCACGGCGCAGGAGATCCGCCGCCGGAGCCAGGACCGGCTGCTCTACACCAACGCGCGCGGCGGGGC
CATGGACTCGCGCGGCCTCCCCTGGGACCCCGTCCCCTTCAAGCACCCCAGCACGTTCGACACCCTCGCCATGGACCCCG
AGCGCAAGGCGTCCATCATGGCCGACCTCCGCGACTTCGCCGCCGGCAGCTCGTTCTACGAGCGCACGGGCCGCGCCTGG
AAGCGCGGGTACCTCCTGTACGGCCCGCCGGGGACGGGCAAGTCCAGCATGATCGCGGCCATGGCCAACTTCCTCGGGTA
CGACGTGTACGACCTCGAGCTCACCGAGGTGAGCAGCAACGCCGAGCTGCGGAAGCTGCTGATGAAGACCACGTCCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCGTCGACCTCACCAACCGGGCGGCCCT-------GCCCCCGGCGCCGAA
GCCGCGGCCAACCCTCGACGGCGCGATCGACCAGGACGTGGGGACGGCGTCGGGGCGGTCGATCACGCTCTCCGGCCTGC
TCAACTTCACCGACGGGCTGTGGTCGTGCTGCGGGTCGGAGCGCATCTTCGTCTTCACCACGAACCACATCGAGAAGCTG
GACCCGGCGCTGCTCCGCTCCGGCCGGATGGACATGCACGTCTTCATGAGCTACTGCACGTTCCCGGCGCTCAAGATCCT
CCTCAAGAACTACCTCTGTCTCGAAGACTCTGCGGACGACGGCGCCGAGGTGATGCGGGGGCTGGAGGAATGGATCGAGG
CGGCGGAGATCACGCCGGCGGACGTGAGCGAGGTGCTGATCAAGAACCGGAGGAACGGGAAGGAGAGGGCGATGGAGGAG
CTGCTGGAGGTCCTGAAAGCGCGCGCCGAGAAGCGGCGGCTCGACGGCGGCAAGGTGGCGGCG------GCGGCGGCGCC
GAGGGACAACGACGAAGAGGAGGAGGAAAAGAGGGCCCTGGAGAGCCCCAAGGAAGGGAAAGGGCCGGCCGGCAAGAACA
GCTGCGGGGACGGACAGGACGAGGAGACGGATGCCAAGAAACAGCTGTGA------------------------------
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>chr5D_1_TraesCS5D01G225300
TTGAATCATGAAGAAAATACAAGAAAACCAACAAACTTAATTAATTGTTAACGAGGCTACAAAAACAATATGATTAGGTT
AGCGACTTAATATAGTATTATGGTAGTACAGGACAATTGCGTATAGACTCGTTAAATTCGTACGTGCT---------AGT
AGAAGTTTGCCTCACTTGGGTCATTCTGATCACTGTGTGTCATTGTGTGTTATTCGATGGTTGAGCTGCCAAATAGGCGT
AGACCTATAGTAAACAGGGAAACTCCATATTCACGAAAACAAAAAGTGCAGTTTCCGTGTCCGTTCCGCCGAAAAACACG
GTTCCGTTTTGTTTCTGTTTCCGTGAAAAAATTTGCGTTTCTA---TTTCCGCCCCTTCATTTCCC-----------TTT
TTTCACTGAAGAAGCGGAGCGTTTCCGCTCCGTTTTCA----TCTATACTGTCAGACTTTTCGTTCCGTTTTCCGTTTC-
-CGAAGAACACGGTTCCGTTTGTA-----AAAAAAATCTATTTCTATTTCTGTTTTCCAATTTCCTCCCCAATTCTCTTT
TTTCTCC-AAAAAGCGGAAAGTTTTTGCTTCATTTTCATCCTTGTTTTCAACCATCTACGAAACCCAACAGGATCCATAT
GCAGGTCC--ATATCCCCCTCTCGGTCCAGAGTGAAGATCTCTCATGGTATGTGCATGCATGCCCACCCCTTCTTCGCTG
CATTGCC-----TGCCTATACTTCCAATAATTTATTATACCACATCTCCATCGATGGCGACCTTGCTCTGAGGCGATGGC
CTACTACTCCATGGAGCTCACACAAGGCTTCATCTTTCATTTTCCCCTAAAATAATCCTTCGTCCCCAGCTCATCTCAGC
GTCTCCTCCTATAAAAGCCTCGCCCCCCTGACCCTTCTCGTTGGAAAACTTGTCCAAGGCCAACCTCGCCGTTTCAGCAG
CCCGTTTCAGTCGGTTCCCATCCCCCCTCGCGT-------TTCTTCTTCCAGGTCCAGGCCGGGTGCAAGAGAGGCGGAG
TGAGCGACCATGAAGGAGTACTGGACGATGCTGGCGTCGCTCATGGGCGCGCTGGCGTTCCTGCAAGGGGTGCTGCACGC
CGTGTTCCCGGCGGAGCTGCGGGCGGCGCTGGCCCGGCTGCTCGGGCGCCTCACCCGGGCCTTCTCCCCCTACTGCTACT
TCGACGTCACGGAGACGGACGGGATGAGCAACAACGAGATCTACGACGCCGTGCAGCTCTACCTCAGCAGTACGGCCGCG
CCGGCGTCGGGGGCCCGGCTCAGCCTCACGCGCCCGCACAACGCCACCTCCTTCACCTTCGGGCTCGCCGCCAGCGACCG
CGTCGTGGACGCCTTCCGCGGCGCGGCCGTCACGTGGGAGCACGTGGTGGCGCCGCGCCAGTCCCCCGGCTTCTCCTGGC
GCCCGCTCCCCGAGGAGAAGCGCCGGTTCACGCTCCGGATCCGCCGCGGCGACCGGGAGAAGCTGCTGCCGGCCTACCTC
GACCACATCCTCGCCACGGCGCAGGAGATCCGCCGCCGGAGCCAGGACCGGCTGCTCTACACCAACGCGCGCGGCGGGGC
CATGGACTCGCGCGGCCTCCCCTGGGACCCCGTCCCCTTCAAGCACCCCAGCACGTTCGACACCCTCGCCATGGACCCCG
AGCGCAAGGCGTCCATCATGGCCGACCTCCGCGACTTCGCCGCCGGCAGCTCGTTCTACGAGCGCACGGGCCGCGCCTGG
AAGCGCGGGTACCTCCTGTACGGCCCGCCGGGGACGGGCAAGTCCAGCATGATCGCGGCCATGGCCAACTTCCTCGGGTA
CGACGTGTACGACCTCGAGCTCACCGAGGTGAGCAGCAACGCCGAGCTGCGGAAGCTGCTGATGAAGACCACGTCCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCGTCGACCTCACCAACCGGGCGGCCCT-------GCCCCCGGCGCCGAA
GCCGCGGCCAACCCTCGACGGCGCGATCGACCAGGACGTGGGGACGGCGTCGGGGCGGTCGATCACGCTCTCCGGCCTGC
TCAACTTCACCGACGGGCTGTGGTCGTGCTGCGGGTCGGAGCGCATCTTCGTCTTCACCACGAACCACATCGAGAAGCTG
GACCCGGCGCTGCTCCGCTCCGGCCGGATGGACATGCACGTCTTCATGAGCTACTGCACGTTCCCGGCGCTCAAGATCCT
CCTCAAGAACTACCTCTGTCTCGAAGACTCTGCGGACGACGGCGCCGAGGTGATGCGGGGGCTGGAGGAATGGATCGAGG
CGGCGGAGATCACGCCGGCGGACGTGAGCGAGGTGCTGATCAAGAACCGGAGGAACGGGAAGGAGAGGGCGATGGAGGAG
CTGCTGGAGGTCCTGAAAGCGCGCGCCGAGAAGCGGCGGCTCGACGGCGGCAAGGTGGCGGCG------GCGGCGGCGCC
GAGGGACAACGACGAAGAGGAGGAGGAAAAGAGGGCCCTGGAGAGCCCCAAGGAAGGGAAAGGGCCGGCCGGCAAGAACA
GCTGCGGGGACGGACAGGACGAGGAGACGGATGCCAAGAAACAGCTGTGAGACTGAGCAAGCCAAGCGCCGCGCCGAGGG
GGACAGGAAGAGGGAAAGCGAAGGGTTCAAAATTTCCCTGTTCGGTCACGCG------AGATATTCTTCTCCCTTTTCAC
TGGAGAGTGGAGAACGCAATGCAAG-GAAAAATAGTCTTTCCTCTTCCGTTATTCGATGTTTGCAGTAGCAAGTAATGGC
ACT------------CCTAGATGAATTCTCTTGAGTTTGTTTGGTATGCT----------CTATGGTAAGAGGAAAGAGA
TGTTTGAGGGCTCACACTGGTGTCATTGCGTGGCATGTGCAACCCATGCTCTGCTTGTTTGGCATGCGCCTCCCTCCCTG
TTGTTTGTGCATGAGAAGGTCGTGTTCAGTTGGTGCAGATTCAACAGTGCTCGAAGGCACATCACGTTTTCCCTAGGCCG
GCAGGGCAGGGTTTCTGCGCTTTGTGTAGGGCCTCGGATTAGTTTATGGCCTCTTACCAAGCCTGGATATGTGCACGTTC
GTCTC-----------------TTCTTTGGATCCCCTGTGGCGCACGTATCCAAGGCAACCGTCGCGGGCTCCAGCTCAA
CGCTTTCGGAGAAAAATAATGCCCCGCCCGTGGAGTTGGATCATGGGTCTGTACTCTGCAGGCACTGTATGAGCCGCCCC
CTACGCCCTGGCCTTCTGTTTTCTACACGCAGGACGGACTAGAAAACGAC--TATTTTGTTGTGTTTTGTGCGT------
---------------------------TCTGCCGTCGTGCACTTAATAAGTGTTGATCTTTTCTTGTATAGTAGAA----
-------------ACAAACCAGGAGTTGATAGCTATGGGCAGGAACCGACCGGC--GTCTTCGAATCAGAATCTACGCAT
GTTCCTCGCGTGACATTCTCCGTTATTTTTCCTTCTCTTGCTCGACATTCTCTGTTATTTT---TTCCCTCACTCGATTC
CATG-----------------TGCCTGCAAAATCAGAGGGTATATCATGATGATGATCATCATCAGGGATCCCTGATCCC
CCGATA---TCTTATTCCCTTTCCGCGGGCGAGAGTCGGATTAGGCCGGCCGG
>chr5A_1
TTGAACCATGAAGAAAATAAAAGAAAATCAACAGACTTAATCAATTGTTAACATGGCTACAAAAATAATGTAATTAGGTT
AGCGACTTAACATAATATTGTGGTAGTAGAGGACAACTGCGTATAGAGTCGTTAAATTGGTGCGTGCT---------AGT
AGAAGTTTGCCTCACATGGGTCATTCTGATCACTCTA--TCATTATGTGTTATTCGATGGTTGAGCTACCAAACAGCCAT
AGACCTACAGTAAAAAAGGAAATTCCATATTCATGAAAGTGAAAAATTCAGTTTTCGTGTGAGTTCCACCGAAAAACGCG
GCTACGTTTTGTTTCCGTTTCCGTGAAAAAGAATTCCGCTTCTACTTTTCCGTTTCCATATTACCTCTTCGTTTTCTCCT
TTTCTCCGGAAAAGCAGAACGTTTCCGCTCCGTTTTCA----TCTCTACTGTCAGACTTTTCGTTCCGTTTTCCATTTC-
-CGAAAAACACGGTTCCGTTTATATGTAAAAGAAAATCTGTTTCTATTTCTGTTTTCCAATTTCCTCCCTGATTCTCTTT
TTCCTCCGAAAAAGTGAAAAGTTTTTGCTTCATTTTCATCCTTGTTTTCAACCCTCTACCAAACCCAACAGGATCCATAT
GCAGGTCC--ATATCCCCCTCTCGGTCCACAGTGAAGATCTCTCATGGTATGTGCATGCATGCGCA-CCCTTCTTCGCTG
CATTGCC-----TGCCTATACTTCCAATAATTTATTGTACCACATCTCCATCGATGGCGACCTTGCTCTGAGGCCATGGC
CTA-------------CTCACACAAGGCTTCATCTTTCATTTCCCCCTAAAATAATCCTTCGTCCCCAGCTCATCTCAGC
CTCTCCTCCTATAAAACCCTCGCCCCCC-GACCCTTCGAA--GGAAAACTTGTCCAAGCCCAACCTCG------------
-CCGTTTCAGTCGGTTCCCATCCCCCCTCGCGTGCGTTTCTTCTTCCTCCAAGTCCAGGCCGGGTGGGAGAGAGGCGGGG
CGACCGACGATGAAGGAGTACTGGACGATGCTGGCGTCCCTCATGGGCGCGCTGGCGTTCCTGCAAGGGGTGCTGCACGC
CGTGTTCCCGGCGGAGCTGCGGGCGGCGCTGGCGCGGCTGCTCGGGCGCCTCACCCGCGCCTTCTCGCCCTACTGCTACT
TCGACGTCACGGAGACGGACGGGATGAGCAACAACGAGATCTACGACGCCGTGCAGCTCTACCTCAGCAGCACGGCCGCG
CCGGCATCGGGGGCCCGGCTCAGCCTCACGCGCCCGCACAACGCCACCTCCTTCACCTTCGGGCTCGCCGCCAGCGACCG
CGTCGTCGACGCCTTCCGCGGCGCGGCCGTCACGTGGGAGCACGTGGTGGCGCCGCGCCAGTCCCCCGGCTTCTCCTGGC
GCCCGCTCCCCGAGGAGAAGCGCCGGTTCACGCTCCGGATCCGCCGCGGCGACCGGGAGAAGCTGCTGCCGGCCTACCTC
GACCACATCCTCGCCACGGCGCAGGAGATCCGCCGCCGGAGCCAGGACCGGCTGCTCTACACCAACGCGCGCGGCGGGGC
CATGGACTCGCGCGGCCTCCCCTGGGACCCTGTCCCCTTCAAGCACCCCAGCACGTTCGACACCCTCGCCATGGACCCCG
ACCGCAAGGCGTCCATCATGGCCGACCTCCGCGACTTCGCCGCCGGCAGCTCGTTCTACGAGCGCACGGGCCGCGCCTGG
AAGCGCGGGTACCTCCTGTACGGCCCGCCGGGGACCGGCAAGTCCAGCATGATCGCGGCCATGGCCAACTTCCTCGGGTA
CGACGTGTACGACCTCGAGCTCACCGAGGTGAGCAGCAACGCCGAGCTGCGGAAGCTGCTGATGAAGACCACGTCCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCGTCGACCTCACCAACCGGGCGGCCCT-------GCCCCCGGCGCCGAA
GCCGCGGCCAACCCTGGACGGCGCGATCGACCAGGAAGCGGGGGCGGCGTCGGGGCGGTCGATCACGCTCTCCGGCCTGC
TCAACTTCACCGACGGGCTGTGGTCATGCTGCGGGTCGGAGCGCATCTTCGTCTTCACCACGAACCACATCGAGAAGCTG
GACCCGGCACTGCTCCGGTCCGGCCGGATGGACATGCACGTCTTCATGAGCTACTGCACGTTCCCGGCGCTCAAGATCCT
CCTCAAGAACTACCTCTGTCTCGAATCCGGCGCGGACGACGGCGCCGAGGTGATGCGGGGGCTGGAGGAATGGATCGAGG
CGGCGGAGATCACGCCGGCGGACGTGAGCGAGGTGCTGATCAAGAACCGGAGGAACGGGAAGGAGAGGGCGATGGAGGAG
CTGCTGGAGGCCCTGAAAGCGCGCGCCGAGAAGCGGTGTCTCGACGGCGGCAA------GTCGGCGGCAGCGGCGGCGGC
GAAGGACAACGACGAAGAGGAGGAGGAGAAGAGGGCCCTGGAGAGCCCCAAGGAAGGGAAAGGGCCGGCCGGCAAGGACA
GCTGCGACGACGGACAGGACGAGGAGACGGATGCCAAGAAACAGCTGTGAGACTGAGCAAGCCAAGCGCCGCGCTGAGGG
GGACAGGAAGAGGGAAAGCGAACGGTTCAAAATTTCCCTGTTTGGTCACGCCATATTCAGATATTCTCCCCCCTTTTCAC
TGGAGAACGCA--ATGCGATGCAAGAGAAAAATAGCCTTTCCTCTTCCGTTATTCGATGTTTGCAGTAGCAAGTAGTGGC
ACT------------CCTAGATGTATTCTCTTGAGTTGGTTTTCTTTTCTCTATCCTCTACTATGGTAAGAAGAAAGAGA
TGTTTGAAGACTCACACTGGTGCCTTTGCGTGGCATGTGCAACCCATGCTCTGCTTGTTTGGCATGCGCCTCCCTGTTGC
----TTGTGCATGAGAAGGTCGTGTTCAGTTGGTGCAGATTCAACAGTACTCGAAGGCACATCACGTTTTCCCTAGGCCG
GCAG----GGGTTTCTGCGCTTTGTGTAGGGCCTCGGATTAGTTTATGGCCTCTTACCAAGCTTGGATATGTGCACGTTC
GTCTGTGGCGCATTGGTTTATGTTCTTTGGATCCCCTGTGGCGCACGTATCCAAGGCAACCGTCGCGGGCTCCAGCGCGA
CGCTTTCGGAGAAAAATAATGCCTCGCCCGTGGAGTTGGATCATGGGTCTGCACCCTGCAGGCACTGTATGAGCCGCCCC
CTAC-CCCTGGCCTTCAATTTTCTACACAGAGGACGGACTAGAAAACGACTGTATTTTCTTCTGTTTTATTTATTTATTT
TTATTA---------------------TCTGCCGTCGTGCACTTAATAAGCGTTGATCTTTTCTTGTACTACTACTCCAA
TACAAATCAATGCAGAAACGGCAATTTGATTGCAATGAGCAGGCAACGCGACCCGGGTCTTCGAATGGGAATCTATGCAT
GTTCCTAGCGTGACATTCTCCGCTATTTCCCCCCCTCTCGCTGGACATTCTCTGTTGTTTTTCCTTCTCTCACTCGATTC
CCATGTGCCTGTTTGGAGCGCTGCCTGCAAAATCAAAGGATATATCATGATGATGATCATCATCAGGGATCCATGATGCC
CCGATA---TCTTATTCCCTTTCCGCGGCCGAGAGCGGATTAG----------
>chr5B_1
TTGAATCATGTAGAAAATACAAAAA--CCAACAAACTTAATCAACTGTTAACATGGCTATAAAAATAATATGGTTAGATT
AGCGACTTAACATAGTATTGTGGTAGTACATGACAACTGCATATAGACTCGCTAAATTCATGCGTCCTATTAGAGCCAGT
AGAAGTTTGCCTCACATGGGTCATTTTGATTATTGTGTGTCATTGTGTGTTATTCGATGGTTGAGCTGCCAAACAGCCGT
AGACCTATAGTAAAAAGGGAAATTCCATATTCACGGAAACGAAAAGTTCAGTTTCCGTGTCCGTTCCGCCAGAAAACATG
GTTCCCTTTTGTTTCCGTTTCCGCGTAAACATTTGTGTTTCTG---TTTCCGTTTCCATATTTCCTCTTCGTTTTCTTTT
TTTCATCGAAAAAGCGGAACGTTTCCGCTCCATTTTCAGCTCTCTCTACTGTCAGACTTTTCGTTCCGTTTTCCGTTTCA
CCGAAAAACACGGTTCCGTTTCCATGTAAA-GAAAATCTGTTTCTATTTCTGTTTTTCTATTTTCTCCCCGTTTCTCTTT
TTTGTCCGAAAAAGCGGAAAGTTTTTGCTCGCTTTTCACCCTTGTTGTCAACCATCTACCAAACCCAATAGGATCCATAT
GCAGGTCCATATATCCCCCTCTCGGTCCAGAGTGAAGATCTCTCATGGTTTGTGCATGCATGCCCA-CCCTTCTTCGCTG
CATCTGAGGCCATGCCTATACTTCCAATAATTTATTGTACCACATCTCCATCGATGGCGACCTTGCTCTGAGGCCATGGC
CTA-------------CTCTCACAAGGCTTCATCTTTCATTTCCCC----AATAATCCTTCGTCTCCAGCTCGTCTCAGC
GTCTCCTCCTATAAAACCCTCGCCCCCCTGACCCTTCGCA--GGAAAACTTGTCCAAA---------G------------
-CCGCTTCAGTCGGTTCCCATCCCCCCTCGCGT-------TTCTTCTTCCAAGTCCAGGCCGGGTGCAAGAGAGGCGGGG
TGACCGACCATGAAGGAGTACTGGACGATGCTGGCGTCGCTCATGGGCGCGCTGGCGTTCCTGCAAGGGGTGCTGCACGC
CGTGTTCCCCGCGGAGCTGCGGGCGGCGCTGGCGCGGCTGCTCGGGCGCCTCACCCGAGCCTTCTCGCCCTACTGCTACT
TCGACGTCACGGAGACGGACGGGATGAGCAACAACGAGATCTACGACGCCGTGCAGCTCTACCTCAGCAGCACGGCCGCG
CCGGCGTCGGGGGCCCGGCTCAGCCTCACGCGCCCGCACAACGCCACCTCCTTCACCTTCGGGCTCGCCGCCAGCGACCG
CGTCGTCGACGCCTTCCGCGGCGCGGCCGTCACGTGGGAGCACGTGGTGGCGCCGCGCCAGTCCCCCGGCTTCTCCTGGC
GCCCGCTCCCCGAGGAGAAGCGCCGGTTCACGCTCCGGATCCGTCGCGGCGACAGGGAGAAGCTGCTACCGGCCTACCTC
GACCACATCCTCGCCACGGCGCAGGAGATCCGCCGCCGGAGCCAGGACAGGCTGCTCTACACCAACGCGCGCGGCGGGGC
CATGGACTCGCGCGGCCTCCCCTGGGACCCCGTCCCCTTCAAGCACCCCAGCACGTTCGACACCCTCGCCATGGACCCCG
ACCGCAAGGCGTCCATCATGGCCGACCTCCGCGACTTCGCCGCCGGCAGCTCGTTCTACGAGCGCACGGGCCGCGCCTGG
AAGCGCGGCTACCTCCTTTACGGCCCGCCGGGGACAGGCAAGTCCAGCATGATCGCGGCCATGGCCAACTTCCTCGGGTA
CGACGTGTACGACCTCGAGCTCACCGAGGTGAGCAGCAATGCCGAGCTGCGGAAGCTGCTGATGAAGACCACGTCCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCGTCGACCTCACCAACCGGGCGGCCCT-------GCCTCCGGCGCCGAA
GCCGCGGCCAACCCTCGACGGCGCGATCGACCAGGACGCGGGGGCGGCGTCGGGGCGGTCGATCACGCTCTCCGGCCTCC
TCAACTTCACCGACGGGCTGTGGTCGTGCTGCGGGTCGGAGCGCATCTTTGTCTTCACCACTAACCACATCGAGAAGCTG
GACCCGGCGCTGCTCCGGTCCGGCCGGATGGACATGCACGTCTTCATGAGCTACTGCACGTTCCCGGCGCTCAAGATCCT
CCTCAAGAACTACCTCTGCCTCCA---------GGACGACGGCGCCGAGGTGATGCGTGGGCTGGAGGAATGGATCGAGG
CGGCGGAGATCACGCCGGCGGATGTGAGCGAGGTGCTGATCAAGAACCGGAGGAACGGGAAGGAGAGGGCGATGGAGGAG
CTGCTGGAGGTCCTGAAAACGCGCGCCGAGAAGCGGCGGCTCGACGGCGGGAA------GGCG------GCGGCGGCGGC
GAAGGACAACGACGAAGAGGAAGAG---AAGAGGGCCCTGGAGAGCCCCAAGGAAGGGAAAGGGCCGGCCGGCAAGGACA
GCTGCGGGGACGGACAGGACGAGGAGACGGATGCCAAGAAACAGCTGTGA--CTGAGCAAGCCAAGCGCCGCGGTGAGGG
GGACAGGAAGAGGGAAAGCGAACGGTTCAAAATTTCCCTGTTTGGTCACACC--------ATATTCTTCTCCCTTTTCAC
TGGAGAACGCC--ACGCGATGCAAG-GAAAAAATAGTCTTCCTCTTCCGTTATTCGATGTTTGCAGTTGTAGCAAGTACT
AGTAGTACTCCTGGACCTAGATGAATTCTCTTGAGTTAGTTTTCTTTTCTCTATGT----------TAAGAAGAAAGAGA
TGTTTGAAGACTCACACCGGTGTCATTGCGTGGCATGCGCAATCCATGCTCTGCTTGTTTGGCATGCGCCTCCCTGTTGC
----TTGTGCGTGAGAAGGTCGTGTTCAGTTGGTGCAGATTCAACAGTATTCGAAGGCACATCACGTTTTCCCTAGGCCG
GCAG----GG-TTTCTACGCTTTGTGTAGGGCCTCAGATTAGTTTATGGCCTCTTACCAAGCCTGGATATGTGCACGTTC
GTCTC-----------------TTTTTTGGATCCCCTGTGGCGCACGTATCCAACGCAACCGTCGCGGGCTCCAGCTCAG
CGCTTTCGGAGAAAAATAATGCCTCGCCCGTGGAGTTGGATCGTGGGTCTGCACTCTGCAGGCACTGTATGAGCCGCCCC
CTGC-CCCTGGCCTTCCATTTTCTACACGCAGGACGGACTAGAAAACGACTGTATTGTGTTGTGTTTTGTGCGTTGTGCC
TCGGCATATAGTAGCACAACTTTTGTTTCTGCCGTCGTGCACTTAGTAAGTGTTGATCTTTTCTTGTA---TAGAA----
-------------ACAAACCAGGAGTTGATAGCTATGGGCAGGAACCGACCGGC--GTCTTCGAATCAGAATCTACGCAT
GTTCCTCGCATGACATTCTCCGTCATTTTTCCTTCTCTTGCTCGACATTCTCTGTTATTTTC---TCTCTCGCTCGATTC
CATG-----------------TGCCTGCAAAATCAGAGGATATTT-ATCATGATGATAATCATCAGGGATCCCTGATCCC
CCGATAGTATCTTATTCCCATTCCGGGGCTGAGAGTCGGATTAG---------
>chr5D_1568
CTCCGC--------------------------------------------------------------------------
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---------------------CTGGACGCACGTGCCCTTCCAGCACCCCAAGACGTTCGCCACGCTCGCCATGGACCCGG
CCAGCAAGAAGGAGGTCATCGACGACCTCGACGCCTTCAAGGCCGGCAAGGAGTGGTACGAGCGCGTCGGCAAGGCGTGG
AAGCGCGGCTACCTGCTGCACGGCCCGCCCGGGACGGGCAAGTCGGCCATGATCGCCGCCATGGCCAACCACCTGGACTA
CGACGTGTACGACATCGAGCTCACTTCCGTGCACTCCAACACGGACCTCCGCAAGCTCTTCATCGGCACCACCAGCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCCTCGACCTCACCGGCGCGCGCCCCAAGAAGAAGGACGCTGCCCCAGAG
GACGAGGACAA----GGCCAGCAAGGGCGACAAGAAGGGCGCGGCGGACGCGAGCAGCAAGGTGACGCTGTCGGGCCTGC
TCAACTTCATCGACGGGCTGTGGTCGGCGTGCGGCGGCGAGCGGGTCATCGTGTTCACCACCAACCACCTGGAGAAGCTG
GACCCGGCGCTCATCCGGAGGGGCCGCATGGACAAGCACATCGAGATGTCCTACTGCCGCGGGCCGGCGTTCGAGTTCCT
CGCCAAGGCCTACCTCGGTGTCGA--------------------------------------------------------
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>chr5B_1568
CTCCGC--------------------------------------------------------------------------
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---------------------CTGGACGCACGTGCCGTTCGAGCACCCCAAGACGTTCGCCACGCTCGCCATGGACCCGG
CCAGGAAGAAGGAGGTCATGGACGATCTCGACGCCTTCAAGGCCGGCAAAGAGTGGTACGAGCGCGTCGGCAAGGCGTGG
AAGCGCGGCTACCTTCTGCACGGCCCGCCGGGGACGGGCAAGTCGGCCATGATCGCCGCCATGGCCAACCACCTCGACTA
CGACGTGTACGACATCGAGCTCACCTCCGTGCACTCCAACACCGACCTCCGCAAGCTCTTCATCGGCACCACCAGCAAGT
CCATCATCGTGATCGAGGACATCGACTGCTCCCTCGACCTCACCGGCGCGCGCCCCAAGAAGAAGGACGCCGCCGCCGAG
GACGAGGACAA----GGCCAACAAGGGCGACAAGAAGGGCGCGGCCGACACGAGCAGCAAGGTGACGCTGTCGGGCCTGC
TGAACTTCATCGACGGGCTGTGGTCGGCGTGCGGCGGCGAGCGGGTGATCGTGTTCACCACCAACCACCTGGAGAAGCTG
GACCCGGCGCTCATCCGGAGGGGCCGCATGGACAAGCACATCGAGATGTCCTACTGCCGCGGCCCGGCGTTCGAGTTCCT
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>SNPs
-----------------------------------------S----------SS-----------S--------------
----------S--------S----------------S------------------------S------------------
---------------S---------------------------------------------------------S--S---
--------------S-------S-----------------S------S--------------------------------
---------------S--------------------------S---------SSS-SSS------S--------------
------S---S-------S--------------------------S----------------------------------
-----S---------------S---------S-------S------------------------------S---------
-----------------------------------------------------------S--------------------
------------------------------------------------------------------S-------------
------------------------------------S-------------------------------------S-----
---SSSSSSSSSSSSS--------------------------S-------------------------------------
----------------S--------------------S-SSS----------------S---------SSSSSSSSSSSS
S--------------------------------------------------S--------------------------S-
---S----------------------------------------------------------------------------
---------------------------------S-----------------------S--------S-------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
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--------------------------------------S----S------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
-------------------------SS-SSS-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSSS-------------------S-
--S------------------------S------------------------------------------------S---
--------------------------------------------------------------------------S-----
----------------------S-------------------S--------S----------------------------
------SS-S-SS----S-----------------S---------------------------------------S----
-------------------------------------S----SS-S-S-----------------------S--------
-------S-S-----------------------------------------------------------------SSSSS
SSSS--------------------------------------------S-------------------------------
----SSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------------------S----------------------------
----S-----------SS--------------------------------------------------------------
--------------------------------------------------------------------SSS---------
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-------------------------------------------------------------------S------------
---------------------------------------S----------------------------------------
----------------------------S---------------SSSSSSSSS
>forward_386
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----------------------------------------------TTTCCGCCCCTTCATTTCCC--------------
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>reverse_2483
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--GGGACAACGACGAAGAGGAG----------------------------------------------------------
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>forward_1271
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---------------------------------------------------TGCAGCTCTACCTCAGCAGT---------
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>reverse_2727
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------GTGGAGAACGCAATGCAAGG------------------------------------------------------
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