>input_sequence_48582
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-----------------------ACAACGCCGGTGTGCGTGGCAGTGGTTATCTCTTTC---------------------
---GCGAGAGTAGCCGGCTAGCTAGGTAGGGGAGAGTGGCAGTCTGGCAGAGAATGGTGGCGCCCGACTTGACCTGAGCA
-----------GAGCTGAGATCCTCCTTCGCGCATGCTTTTTTCTCCTTGCTCCGTCGCGGCGTGCGGCGCTCGTTCGCT
CAGGCACCTGGCCGTGGCCGCCGTCAGTCTCCCGATGCTCCTGTTCTGCGACGCCATGGTGTGGGCCGTCACCTTCCTCA
CCTTCCCCGTGCGCCTCCTCGCCGCCGCCGACAGGGAGCGCAAGGTCCGCCGGACTCCGCCTTGGATCACTAGATCGTTC
CGATTGAATAATTAATCGGATGTGCTTCTTGTGATTTCTTGTCTT------------GGTCAGCTGGAGCGGTTGGTGGG
GGAGATGCAGGGGCAGATGGAGCGGGTGGTGTGGGAGAACAGGGACCTGGAGCAGCGGCTGCGGACGACGCTCAAGGAGA
ACGCGACCATGGAGGGCATCCTCGACGAGATGGAGGAGGAGAACGAGGACGCCTTCGCCAGGATCGACCTCCTCGAGAGC
CAGGTACGAGCAGAGCCGCATCCATCGATTCGCCATTGCGGGGATGCAGAGCAGAGCAGAGCACGGGTATGGTACACTAA
TTTTGTGCTTGGCGTTGGTTCCTGCTCGTTCGGCATGCAGCTCAAGGCGGTCAAGAAGGAGAACATGCGGCTCAAGGAGC
AGAGGGGCAAGTCCGTGTGGGACAAGGCG---------------GCGGCGACGGTGGCGGTGGCTGGAAATGGCGGGGGC
AAGAAGAAGGCTGGCGAACCGAGGCCATGGGAAGGCAAAGAAGAAGAGGAAGAAGAGGCGACAGCGCAGAAGGATCGGCC
CGTCGTCTTCAGACCCGGCGACCTCGACGCCTTCCCACCGTCGGAGGCGCGGGATCAACTGTTGCGGGCGACGGCGCGGC
GCCGGAGCCTGTTCAGCCTGGGCATGTCGCTGACGGTGGGCGGGATCGCGTGGTCGGCGGACAAGCCGTGCCTGCCGCTC
CTCGCGGGGCTCGTCGCCGTGGTGGCCATGTCCATGTGCAGCGTGTCGCGCCTCTTCCACGCGCCCGCGGGCCGCCGTGG
CCTGCCTCCCGCGTCCGCCGCCTCCGACGGCGCCGTGGCGCTGCTGAGCCTCAACTGGTTCCTGCTGGGCGTGCTCACCT
ACCCCATGCTCCCGGGGGTGGCGCGGGCCGTCGTCCCG------------CGCGCCGCTCGCCTCGCCGGCCCCGCTATC
GCGTGGCTCGCTGCCGCAGTGCCCGTTTGACGGCGTGAGGTGGCACCGCAGAGTGGCCTCCGTC--TGTGTATCCGCGGC
TCTGGTTCTCGAGCCTGTAAAAAGA-----GTGATCCAGCCGCCTTTCTGTTTTCTGAAGCTGTGTGAGTCGTTATAGT-
AAAAAGAAAAACTTCATTC-----GCCTAAACTTGAGCATGTGAAAACGTAGGATCTGCCCACGAATATGTGTATTGTAC
TCCTTAGATTCAAATAACACACTAACGTCGTGGCTTTCAATAATGTTATTGTGTTTTT----------------------
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>chr3A_1_TraesCS3A01G506000
TTGGACAAGAAACTTGGTACTGTCGTGCAAGGTAGAGGTAGGAGAAATAGGAGATAAAAGCATGCATGGTGGGAGAAGGA
AATCGAGTGTCGCGTGGTAGCTCAGACATGGAGTGTGGAAGAAAGACAATGACGAGATGTATGTACCTACTAGATCATGA
CCATGAGATATCATCCCATAAAAAATGGCCTTTGACTCTCATGTCACATGAATTTTCTCTTTATATATATATTTGTTAGT
CCGTGGCAACGCACGGACACTTAGCTAGTAATATATAGGTCCTGTTGCAACGCACGGGTCTTTTTACTAGTTACACCAAT
AGGCGGTTTTTTGCACAACAAACCTATTCGGTAGGTGCTCTACGCAAAACTAATCTGATAATTGATGGTTTCCGTAATTT
TCTCATCTCAAACACACCAAATGTGTATACATTTTTCACAGAAAACCGGCACCGATATGGCATATATTTGTTCGGCTACC
TAGTATACAATACAGTGTAATAATTGAAGAAATAACATGAAGAGTAAACTTAGCTAGAAGGGGATGCGGACTATCTGCTC
CCGAGCTGAAATGCTCTCGGATGAACAGTAAAATAAAAAATAATAAAAAATATGG-----GAATTTCGGCTAGAAGGGAA
CTTTTAGCTTCCTGCCCAGTG-----------------------------------------------------------
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-------------------------------------------------------CAACGTGCTAAGTGGAAGTAGCAAC
GCTCTGTTCAAATTGGTGAAAAACAATAAACCAGATCATTAGGGGATTTTTGGCAACAAAAAAAGAAGATCATTAGACAA
CCACGTCTGGCTACGGATAGGGATGGCAACGAC-----------------------CGCTCCCTACGGTGCCCGACGCCG
GGCGCGGTGACGCGGCGGGCAGCGACAGCGCCAGGCCCACGTGTGCAGCCACCCGAGGCGCACGTGTGGCCCTAACCGAC
AGCGCGGCACGCGCTCACTCCTCCCTCAGTCTTTGTCCCCAGCATGGAACTCTCAACCAAATCCATCTCCAGTTCCACCC
A-CACCCCTCTCCTTGCTCCACGACAACGCCGGTGTGCGTGGCAGTGGTTATCTCTTTC---------------------
---GCGAGAGTAGCCGGCTAGCTAGGTAGGGGAGAGTGGCAGTCTGGCAGAGAATGGTGGCGCCCGACTTGACCTGAGCA
-----------GAGCTGAGATCCTCCTTCGCGCATGCTTTTTTCTCCTTGCTCCGTCGCGGCGTGCGGCGCTCGTTCGCT
CAGGCACCTGGCCGTGGCCGCCGTCAGTCTCCCGATGCTCCTGTTCTGCGACGCCATGGTGTGGGCCGTCACCTTCCTCA
CCTTCCCCGTGCGCCTCCTCGCCGCCGCCGACAGGGAGCGCAAGGTCCGCCGGACTCCGCCTTGGATCACTAGATCGTTC
CGATTGAATAATTAATCGGATGTGCTTCTTGTGATTTCTTGTCTT------------GGTCAGCTGGAGCGGTTGGTGGG
GGAGATGCAGGGGCAGATGGAGCGGGTGGTGTGGGAGAACAGGGACCTGGAGCAGCGGCTGCGGACGACGCTCAAGGAGA
ACGCGACCATGGAGGGCATCCTCGACGAGATGGAGGAGGAGAACGAGGACGCCTTCGCCAGGATCGACCTCCTCGAGAGC
CAGGTACGAGCAGAGCCGCATCCATCGATTCGCCATTGCGGGGATGCAGAGCAGAGCAGAGCACGGGTATGGTACACTAA
TTTTGTGCTTGGCGTTGGTTCCTGCTCGTTCGGCATGCAGCTCAAGGCGGTCAAGAAGGAGAACATGCGGCTCAAGGAGC
AGAGGGGCAAGTCCGTGTGGGACAAGGCG---------------GCGGCGACGGTGGCGGTGGCTGGAAATGGCGGGGGC
AAGAAGAAGGCTGGCGAACCGAGGCCATGGGAAGGCAAAGAAGAAGAGGAAGAAGAGGCGACAGCGCAGAAGGATCGGCC
CGTCGTCTTCAGACCCGGCGACCTCGACGCCTTCCCACCGTCGGAGGCGCGGGATCAACTGTTGCGGGCGACGGCGCGGC
GCCGGAGCCTGTTCAGCCTGGGCATGTCGCTGACGGTGGGCGGGATCGCGTGGTCGGCGGACAAGCCGTGCCTGCCGCTC
CTCGCGGGGCTCGTCGCCGTGGTGGCCATGTCCATGTGCAGCGTGTCGCGCCTCTTCCACGCGCCCGCGGGCCGCCGTGG
CCTGCCTCCCGCGTCCGCCGCCTCCGACGGCGCCGTGGCGCTGCTGAGCCTCAACTGGTTCCTGCTGGGCGTGCTCACCT
ACCCCATGCTCCCGGGGGTGGCGCGGGCCGTCGTCCCG------------CGCGCCGCTCGCCTCGCCGGCCCCGCTATC
GCGTGGCTCGCTGCCGCAGTGCCCGTTTGACGGCGTGAGGTGGCACCGCAGAGTGGCCTCCGTC--TGTGTATCCGCGGC
TCTGGTTCTCGAGCCTGTAAAAAGA-----GTGATCCAGCCGCCTTTCTGTTTTCTGAAGCTGTGTGAGTCGTTATAGT-
AAAAAGAAAAACTTCATTC-----GCCTAAACTTGAGCATGTGAAAACGTAGGATCTGCCCACGAATATGTGTATTGTAC
TCCTTAGATTCAAATAACACACTAACGTCGTGGCTTTCAATAATGTTATTGTGTTTTTTTTCAAATACTCCCTCTGGTCT
TTTTACTATGTATATTAGAATTCTAAGTCAAACTTCATAACTTCACAAAGTTTGACCATATTTGTATGAAAAAAATATCA
ACATCTGCCATGCTATAAAACTTTAAGTCACGACACATATATTGATATTGATTTTAGATTGTGAATATTGATACTTTTTT
CTTATAAAGTTGGTCAAACTTTACGAGCCTTCACTTCAGTCAAAACTATAATGTTAGGACGTCGATAACTGTCACACATG
TGGTGTATCGGTTGATTGTGCCACATGCCT-GTGTGACACCGAGACGACCCCGCACGCACGACCGCGTCCGG--GCGCGC
AGCCATAGCCCACACGTCCAGG-----------------------------CAAACGACCGCGCTGCCCGCACGACCCAG
CACGCCAGTCGTCCTGGCCTCATTTCGATCCCCAGTTCGACCTGCCGCCGCCGTCTTCTACCTCTTGACCCCGTACCTCC
ATCGCCTTCCTTCTCTGGTTGTCATGGCAACCAGAGAAGATCCATAGCGCCTTCCCACCGCTAACCACCC----------
----------CC-ATCAACCCCGTCCTTTCAAGACGATGAGCAAAAAGCAGGTCGATCTCCGATCTCCTTCTGTTTATCG
TCCTTTTTCTGTCCAGAAATTTAAAATTGC-AAAATTTGCCCATGAAAATGGCGACTGGATCCACGCTATCAGGGG-AAA
-CAACCCACGGATTCGTGTGCATTCGCATTTGCCCATC--AACATACGCCAGATCTGTCATATACTATGCTAGATTTGAG
CTAAGCTTCTAGGTTGGCTTGATGCAAGTAGTTGGTAATGAAGGATGCGCATGAATCACTG---AATAGGGAGAGAAAGG
AGAAATTTGGCATAGGAAGGGAGAAAAATAATAATTTCCACTTGTATCTAACATCAGTTGCCACCTATTGTTGTCGTTAT
GTGCCATCATGTTTTCTTGTTGCTTGCCATCCTATTTTATTGGCCGTTGTCATCGGTTCAAAATGATAGCTGGCATCCA
>chr3D_269
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----------------------------TAATATATAGGTCTCGTTGCAATGCACGGGTCTTTTTGCTAGTTACACCAAT
AGGCGGTGTTTTGCGCAACAAACCCATTCAGTAGGTGTTGTACGCAAAACTAATCTGATAGTTGATGGTTTCCGTAATTT
TCTCATCTCGAACACACCAAATGTGTATGCATTTTTCACAGAAAACCGGCACTGATATAGCATATATTTGTTCGGCTACC
TAGTGTACAATACAGTGTAATAATTGAAGAAATAACATGAAGAGTAAACATAGCTAGAAGGGGATGCGGACTATCTGCCC
CCAAACTGAACTGCTCTCAGATGAACAGTAAAATTTAAAAAAGCAGTAAAAGAATTCTGAGAATCTCAGCTAGAAGGGAA
CTTTTAGCTTCCTGTCCAGTGGAACGTGTTTTTTTTCGAGAATACGCAAATTGCGTATCATAAAATATAATTTTATAGAA
GGGAGAATTTGATTACAAGAAGCCAACAGTAGTGCGAACATCACCATTAGCCCACCCACGCCACAACAAGAAAAGAAACT
ACAGTCTCACAAAACGCTGTAAACCACCAACTCCGCCTCTAGCAAGTTTCCAGTACAACGTGCTAAGTGGAAGTAGCAAC
GCTCTGTTCAAATTGATGAAAAACAATAAACCAGATCATTAGGGGATTTTACGCAAAAAAAAAAAAAGATCATTAGACAA
CCACGTCTCGCTACGGATAGGGATGGTAACGAC-----------------------CGCTC-------------------
GGCGCGGTGACGCGGCGGGCCGCGACAGCGCAAGGCGCACGTGTGCAGCCACCCGAGGCGCACGTGTCGCCCCAACCGAC
AGCGCGGCACGCCCTGACTTCTCACTCAGCCTCTGTCCCCAGCATGGAACTCTCAACCAAATCCATCTCCAGTTCCACCC
AGCACCCCTCTCCTTGCTCCACGACACGGCCGGCGTGCGTGGCAGTGCTTATCTTTTTCGCCGGAGGTAGCAAGAGTGGC
G-----AGAGTAGTTGACCAGCTAGGTAGGGGAGAGTGGCAGTCTGGCAGAGAATGGTGGCGCCCGACCTGACCTGAGCA
-----------GAGCTGAGATCCTCCTTTGCGCATGCTTTCTTCGTCTTGCTCCGTCGCGGCGTGCGGCGTTCGTGCGTT
CCGGCTCCTGGCCGTGGCCGCCGTCCGGCTCCCGATGCTCCTCTTCTGCGACGCCATGGTGTGGGCCGTCACCTTCCTCA
CCTTCCCCGTGCGCCTCCTCGCCGCCGCCGACAGGGAGCGCAAGGTGACCAACTAAGCCGCCGTCCGCCGTCCGCCCTTC
GCCGGCTGGTCCGCCCTCGCTCGGCTAGCTCTGATTCTTGCGGTTTTCTTCTTTTTGGGGCAGCTGGAGCGGCTGGTGGG
GGAGATGCAGGGGCAGATGGAGCGGGTGGTGTGGGAGAACAGGGACCTGGAGCAGCGGCTGCGGACGGCGCTCAAGGAGA
ACGCGACCATGGAGGGCATCCTCGACGAGATGGAGGAGGAGAACGAGGAGGCCTTCGCCCGGATCGACCTCCTCGAGAGC
CAGGTATGAGCAGAGCCGAATCCGTCGATTCGCCATTGGGGGGATGCAGAGCAGAGAAAGGGGTG----TGGTACACTAA
TTTTGTGCCTGGCGTTTGTGCCTGCTCGGTCGGCATGCAGCTCAAGGCGCTCAAGAAGGAGAACATGCGGCTCAAGGAGC
AGAGGGGCAAGTCCGTGTGGGACAAGGCGGCGGCCACGGCCACGGCGGCGACGGTGGCGGTGGCCGGAAATGGCGGCGGC
AAGAAGAAGCCTGGCGAAACGAGGGCATGGGAAGGCCAAGAAGAAGAGGAAGAAGACGCGCCAGCGCAGAGGGACCAGCC
GGTCGTCTTCAGACCCGGCGACCTCGACGCCTTCCCACCGTCGGAGGCGCGGGATCAGCTGTTGCGGGCGACGGCGCGGC
GGCGGAGCCTGTTCAGCCTGGGCATGTCGCTGGCGGTGGGAGGGATCGCGTGGTCGGCGGACGCGCCGTGCCTGCCGCTC
CTCGCGGGGCTCGTCGGCGTGGTGGCCATGTCCATGTGCAGCGTGTCGCGCCTCTTCCGGGCGCCCGCAGACCACCGCGT
CCTGCCTCCGGCGTCGGCGGCCTCCGACGGCGCCGTGGCGCTGCTGAGCCTCAACTGGTTCCTGCTGGGCGTGCTCACCT
ACCCGATGCTGCCGGGCGTTGCGCGGGCCGTCGTCCCG------------CGCGCCGCGCGCCTCGCCGGCCCCGCCATC
GCGTGGCTCGCTGCCGCGGTGCCCGTTTGACGGCATGAGGTGGCACCGCAGAGGGCATCC---C--TGTGTATCCGCGGC
TCCGGTTCTCGAGCCTGTCTCTGTCTATCCGTGCTGCAGCCGCC--TCTGTTTTCTGAAGCTGTGCGAGTCGTTATAGTA
AAAAAGAAAAACTTCATTCCGTTCTCCTAAACTTGAGCATGTAAAAACGTAGGATCTGCCCACGAGTACGTGTATTGTCC
TTCTCAGATTCAAATAACACACTAACATCGTGGCTTTGAATAATATTATTGTGTCCTTTTTTC-----------------
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>chr3B_762
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CCACGTCTCGCTACGGATAGGGATGGCAAACGACCGCTCCTCCCTACCGTGGCCGACGCCC-------------------
GGCGCGGTGACGCGGCGGCCAGCGACACCGCTAGCCGCACGTGTGCAGCCACTCGAGGCGCACGTGTCGCCTTAGCCGAC
AGCGCGGCACGCGCTCACTCCTCACTCAGTCTCTGT-CCCCGCCTGGAACTCTCAACCAAACCCCTCTCCATGTCCA---
---------------GCTCCACGACACGGCCGGCGTGCGTGTCAGTGCTTATCTTTTTCGCCCGAAGTACCAAGAGTGGC
GTGGCGAGGGTGGCCGGCTAGCTAGGTAGTGGAGCGTGT--------CAGAGAATGGTGGCGCCCGGCCTGACCCGAGCA
GAGCTGAGCCTGAGCTGAGATCCTCCTTCGCGCATGCTTTCTTCGCCTTGCTCCGTCGCGGCGTGCGGCGCTCGCGCGTT
CCGGGGCCTGGCCGTGGCCGCCGTCCGGCTCCCGATGCTCCTCTTCTGCGACGCCATGGTGTGGGCCGTCACCTTCCTCA
CCTTCCCCGTGCGCCTCCTCGCCGCCGCCGACAGGGAGCGCAAGGTGACCACCTAAGCCGCCGTCCGCCG----------
----GCTGGTCCGCCCTCGCTCGGCTAGCTCTGATTCCTGCGGTTTTCTTCTTTCTGGGGCAGCTGGAGCGGCTGGTGGG
GGAGATGCAGGGGCAGATGGAGCGGGTGGTGTGGGAGAACAGGGACCTGGAGCAGCGGCTGCGGACGGCGCTCAAGGAGA
ACGCGACCATGGAGGACATCCTCGACGAGATGGAGGAGGAGAACGAGGACGCCTTCGCCAGGATTGACCAACTCGAGAGC
CATGTACGAGCAGAGCCGAATCCATCGATTCGCCATTGGGGGGATTCG----------------------------CTAA
TTTTGTGCTTGGCGTCTGTGCC-------------TGCAGCTCAAGGCGCTCAAGAAGGAGAACATGCGGCTCAAGGAGC
AGAGAGGCAAGTCCGTGTGGGACAAGGCGGCGGCCACGGCCACGGCGGCCACGGTGGCGGTGGCTGGAAGTGGCGGGGGC
AAGAAGAAGGCTGGTGAACCGAGGGCGTGGGAAGGCCAAGAAGAAGAGGAAGAAGACGCGGCAGCTCAGAAGGACCGGCC
CGTGGTCTTCAAACCCGGCGACATCGACGCCTTCCCACCGTCAGAGGCGCAGGCCCGGCTTCTGCGGGCGACGGCGCGGC
GGCGGAGCCTGTTCAGCTTCGGCATGTCGCTGGCGGTGGGCGGGATCGCGTGGTCGGCGGACGGGCCGTGCCTGCCGCTT
CTCGCGGGGCTCGTCGCCGTGGTGGCCATGTCCATGTGCAGCGTGTCGCGCCTCTTCCGCGCGCCCGCGGGCCGCCGCGT
CCCGCCGCCGGCGTCCGCCGCCTCCGACGGCGCCGTGGCGCTGCTGAGCCTCAACTGGTTCCTGCTGGGCGTGCTCACGT
ACCCCATGCTCCCGGGCGTGGCGCGGGCCGTCCTCCCGCGCGTCCTCCCGCGCGCCACGCGCCTCGCCGGCCCCGCCATG
GCGTGGCTCGCTGCCGCGGTGCCCGTTTGACGGCGTGAGGTGGCACCGCAAAATGGCCTCCGTCTGTGTGTATCCGCGGC
TCTGGTTCTC--------------------------------------TGTTTTCTGAAGTTATGCGAGTCGTTATAGC-
-AAAAGAAAAACTTCATTC-----TCCTAAACTTGAGCATGTACAGACGTAGGATCTGCCCACGAATATGTGTATTGTAC
TTGTCAGATTCAAACAACACACTAACATCGTGGCTTTGAATAATGCTAT-------------------------------
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>chr5D_2788
GACGC---------------------------------------------------------------------------
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--------------------------------------------------------------CGATAACTGCCACACGTG
TGGTGTATCCGGTGGTTGTGCCGCACGCCTCGTGTGGCATGGAGAAGAACCCGCACGCACGACCGCGTCCGGGCGCGCGC
AGCCACAGCCCACACATCCGGTGTGTGGCAAAACCGCCCGCACGTCCGGGCCAGACGACCGCGCTGCCCGCACGACCCAG
CATGCCAGCCGTCCCGGGCTCCTTCCGGTCCCCAGTCCGCCCTGCCGCCATTGTCTCCCACCTCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTTCCATGGAAACCAGAGAGGATCCCTAGCGCCTTCCCATCGCTAATCACCACCCCCCGTCC
CAC-----CCC--A---ACCCTGCCGTCCCAAGACGACAAGCT-AAAACAGGTGGATCTCCGATATCCTTCTGTTTCTCG
ACCTTCTTCTGCCAAGAAATATGAAATTGC-AAA-TTTGCCCACGAAGATGGCGACTGGATCAACGCTATTAGGGC-AAA
-CACCCCATGAATTTGTGTGTCTTTGCATTTGCCCACCAAAACATACGCCAGATCTGCCATAAACTATGCTAGAGTTGTG
CCAAGCTTTTGGGTTGTCTTGGTGCGAGTAGTTGGTAATGGAGCATGCGTAGGAATCACT-ATAAATAGGGAGAGAAAGG
AGGAATTTGGCATAGGGAGGGAGG--AAAAATAATTGCCACTTGTATCTAACGTCAGTTGCCATCTATCGTTGTCCGTAG
TTGCCACCATGTTATCTTATTGCTTGCCATCCTGTTTTGTTGTCTGTTGCCATCGCTTCAAAATGATAGCTGGCATCCA
>chr4D_2892
ATC-----------------------------------------------------------------------------
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-------GCCCACACGTCCGGG-----------------------------CAAACGACCGCGCTGCCCGCATGACCCAG
CACGCCAGTCGTCCCGGCCTCCTTTCGATCCCCAGTCTGACCCGCCGCCGTCGTCTCCTACCTCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTGCCATGGCAACCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCCAC--------
--C-----CCC--A---ACCCCGCCCTCCCAAGACGATGAGCTAAAAACAGGTGGATCTCCGATCTCCTTCTGTTTCTCG
TCTTTCTTCTGTCCAGAAATTTGAAATTGC-AAA-TTTGCCCATGAAGATGGCGACTGGATCCACGCTATCAGGGC-AAA
-CACCCCACGGATTTGTGTGTATTCGCATTTGCCCACC--AACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGCTTCTGGGTTGGCTTGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGGAATCACT-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCATAGGGAGGTAGG--AAACATAATTGCCACTTGTATATAACATCAGTTGCCACCTATCGTTGTCGTTAG
CTGCCACCATGTTATATTGTTGCTTGCCATCCTATTTTATTGGCTGTTGCCATCGCTTCAAAATGATAGCTGGCACCCA
>chr5A_2892
ATT-----------------------------------------------------------------------------
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-------GCCCACATGTCCGGG-----------------------------CAAATGACCGCGCTGCCCGCACGACCCAG
CACGCCAGTCGTCCCGGCCTGCTTTCGATCCCCAGTCTGACCTGCCGCCGTCCTCTCCTACCTCTGGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTGTCATGGCAACCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCCAC--------
--CCCCACCCC--A---ACCCCACCCTCCCAAGACGACGAGCAAAAAGCAGGTTGATCTCCGATCTCCTTCTGTTTCTCG
TCCTTCTTATGTCCAGAAATTTGAAATTGGAAAA-TTTTCCCACGAAGATGGTGACTGGATCCACGCTATCAGGGG-AAA
-CAACCCACAGATTTGTGTGTATTCGCATTTGCCCACC--AACATACACCAGATCTGCCATATACTATGCTAGAGTTGAG
CTAAGCTTCTAGGTTGGCTTGGTGCGAGCAGTTGGTAATGAAGGATGCGCATAAATCACTGAAAAATAGGGAGAGAAAGG
AGAAATTTGGCATAGGGAGGGAGG--AAAAATAATTGCCACTTGTATCTAACATTAGTTGCCACCTATCGTTGTCGTTAA
CTGCCACCATGTTGTCTTGTGGCTTGCCATCCTATTTTGTTGGCTGTTGCCATCGCT-CAAAATGATAGCTGGCATCCA
>chrUn_2892
ATC-----------------------------------------------------------------------------
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-------GCCCACACGTCCGAG-----------------------------CAAACGACCGTGCTGCCCGCACGACCCCG
CACGCCAGTCGTCCCGGCCTCCTTTCGATCCCCAAACCAACGTGCCGTCGTCGTCTCCTACATCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTGCCATGGCAACCAGAGCAGATCCCTAGCGCCTTCCCATCGCTAACCACCCAC--------
--CC---CCCC--A---ACCCCACCCTCCCAAGACGACGAGCTAAAAATAGGTGGATCTCCGATCTCCTTCTGTTTTTCA
TCCTTCTTATGTCAAGAAGTTTGAAATTGC-CAA-ATTGCCCATGAAGATGGCCACTGGATCCACGCTATCACGGC-AAA
-CACCCCACGGATTTGTGTGTATTCGCATTTGCCCAC--AAACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGTTTCTGGGTTGGCTAGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGGAATCACT-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCATAGGGAGGGAGG--AAAAATAATTGCCACTTGTATCTAGCATCAGTTGCCACCGAACGTTGTCGGTAG
TTGCCACCATGTTATCTTGTTGCTTGCCATCCTATTTTATTGGCTGTTGCCATCGCTTCAAAATGATAGCTGGAATCCA
>chr5A_2895
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-------GCCCACACGTCCGGG-----------------------------CAAACGACCGCGCTGCCCGCACGACCCAG
CACGCCAGTCATCCCGGCCTCCTTTCGATCCCCAGTCCGACCCGCCGCCGTCTTCTCCTACATCTCGACCCCCTACCTCC
ATTGCCTTCCTTGTCTGGTTGCCATGGCAATCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCC----------
----------C--A---ACCCCGCCCTCCCAAGACGACCAGCTAAAAACAGGTGAATCTCCGATCTCCTTCTGTTTCTTG
TCCTTCTTCTGGCTAGAA-TTGAAAATTGC-AAA-TTTGCCAACGAAGATGGCGACTGGATCCACGCTATCAGGGC-AAA
ACACCCCACGAATTTGCATGTATTCACATTTGCCAACC--AACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGATTCTCGGTTGGCTTGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGGAATCACT-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCGTAGGGAGGTAGG--AAAAATAATTGCCACTTGTGTCTAACATCAGTTGCCACCTATCGTTGCCGTTAA
GTGCCACCATGTTATCTTGTTGCTTGACATCCTATTTTATTGGTTGTTGCCGTCGCTTCAAAATGATAGCTGGCACCCA
>chr2B_2895
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-------GCCCACACGTCCGGG-----------------------------CAAATGACCGCGCTGCCCGCACGACCCAG
CACGCCAGTCATCCTGGCCTCCTTTCGATCCCCAGTCCGACCCGCCGCCGTCTTCTCCTACCTCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTCCCATGGCAACCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCC----------
----------CCCA---ATCCTGCCCTCCCAAGACGACCAACTAAAACCAGGTGAATCTCCGATCTCCTTCTGTTTCTCG
TCCTTCTTCTGGCCAGAAATTTGAAATTGC-AAA-TTTGCCAACGAAGATGGCGACTGGATCAACGCTATCAGGGGAAAA
-CACCCCACGGATTTGTGTGTATTCCCATTTGCCAACC--AACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGATTCTCGGTTGGCTTGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGGAATCACT-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCATAGGGAGGTAGG--AAAAATAATTCCCACTTGTGTCTAACATCAGTTGCCACCTATCGTTGTCGTTAA
CCTCCACCATGTTATCTTGTTGCTTGCCATCCTATTTTATTGGCTGTTGCCATCGCTTAAAAATGATAGCTGGCACCCA
>chr4A_2895
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-------GCCCACACGTCTGGG-----------------------------CAAACGACCGCGCTGCCTGCACGACCCAG
CACGCCAGTCATCCCGGCCTCCTTTCGATCCCCAGTCCGACCCGCCGCCATCTTCTCCTACCTCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTGCCATGGCAACCAGAGCAGATCCACAGCGCCTTCCCACCGCTAACCACCC----------
----------CC-A---ACCCCGCCCTTTCAAGACGACCAGCTAAAA-CAGGTGAATCTCCGATCTC---CTGTTTCTCG
TCCTTCTTCTGGCCAGAAATTTGAAATTAC-AAA-TTTGCCAACGAAGATGGCGACTGGATCCACGCTATCAGGGCAAAA
-CACCCCACGGATTTGTGTGTGTTCGCATTTGACAACC--AACATACGCCAGATCTACCATGTACTATGCTAGAGTTGAG
CTAAGATTCTCGATTGGCTTGGTGTGAATAGTTGGTAATGAAGGATGCGTAGGAATCACT-AAAAA-AGGGAGAGAAAGG
AGAAATTTGGCGTAGGGAGGTAGG--AAAAATAATTGCCACTTGTGTCTAACATCAGTTGCCACCTATCATTGCCGTTAA
CTGCCACCATGTTATCTTGTTGCTTGCCATCCTATTTTATTGGCTGTTGCCATCGCTTCAAAATGATAGCTGGCACCCA
>chr5D_2895
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-------GCCCACACATCCGGG-----------------------------CAAACGACCGCGCTGCCCGCACGACCCAG
CACGCCAGTCATCTCGGCCTCCTTTCGATCCCCAGTCCGACCCGCCGCCGTCTACTACTACCTCTCGATCCCCTACCTCC
ATCACCTTCGTTCTATAGTTGCCATGGCAACCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCC----------
----------CC-A---ACCCCTCCCTCCCAAGACAACCAGCTAAAAACAGGTGAATCTCCGATCTCCTTCTGTTTCTCG
TCCTTCTTCTGCCCAGAAATTTGAAATTGC-AAA-TTTGCCAACGAAGATGGCGACTGGATCCACGCTATCAGGGCAAAA
-CACCCCACAGATTTGTGTGTATTCGCATTTGCCAACC--AACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGATTATCGGTTGGCTTGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGGAATCACC-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCATGGGGACGTAGG--AAAAA-AATTGCCACTTGTGTCTAACATCAGTTGCCACCTGTCGTTGCCGTTAA
CTGCCACCATGTTATCTTGTTGCTTGCCATCCTATTTTATTGGTTGTTGTCATCGCTTCAAAATGATAGCTGGCACCCA
>chr7D_2895
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------GCCCACACGTCCGAG-----------------------------CAAACGACCGCGCTGCCCGCACGACCTAG
CACGCCAGTCATCTCGATCTCCTTTCGATCCCCAGTCCGACCCGCCGCCGTCTTCTCCTACCTCTCGATCCCCTACCTCC
ATCGCCTTCCTTCTCTGGTTGCCATGGCAACCAGAGCAGATCCATAGTGCCTTCCCACCGCTAACCACCCTCCCC-----
----------CC-A---ACCCCGCCCTCCCAAGACGACTAGCTAAAAATAGGCGAATCTCGGATCTCCTTCTGTTTCTCG
TCCTTCTTCTGGCCAGAAATTTGAAATTGC-AAA-TTTGATAACAAAGATGGCGACTGGATCCATGCTATCAGGGGAAAA
-CACCCCACGGATTTGTGTGTATTCGCATTTGCCAACC--AACATACGCCAGATCTGCCATGTACTATGCTAGAGTTGAG
CTAAGATTATCGGTTGGCTTGGT-CGAGTAGTTGGTAATGAAGGATGCATATGAATCACT-AAAAATAGGGAGAGAAAGG
AGAAATTTGGCATGGGGACGTAGG--AGAAACAATTTCCACTTGCATCTAACATCAGTTGCCACCTGTCGTTGCCGTTAA
CTGCCACCATGTTATCTTGTTGCTTGCCATTCTATTATATAGGTTTTTGCCATCGCTTCAAAATGATAGCTGGCACCCA
>chr2B_2896
--------------------------------------------------------------------------------
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--------CCCACACATCCAGG-----------------------------CAAACGACCGCGCTGCCCGCACAACCCAG
CATGCTAGTCATCCTGGCCTCCTTTCGATCCCCAGTCCGACCCGCTGCCGTCTTCTCCTACCTCTGGATCCCCTACCTCC
ATCGCATTCCTTCTCTGGTTGCCATGGAAACCAGAGCAGATCCATAGCGCCTTCCCACCGCTAACCACCC----------
----------CCCA---ACCCCGCCCTCCCAAGACGACCAACTAAAACCATGTGAATCTCTGATCTCCTTCTGTTTCTCG
TCCTTCTTCTGGCCAGAAATTTGAAATTGC-AAA-TTTGCCAACGAAGATGGCGACTGGATCAACGCTATCAGGGGAAAA
-CACCCCACGGATTTGTGTGTATTCCCATTTGCCAACC--AACATACGCCAGATCTGCCATGTACAATGCTAGAGTTGAG
CTAAGATTCTCGGTTGGCTTGGTGCGAGTAGTTGGTAATGAAGGATGCGTAGCAATCACT-AAAAATAGGGAGATAAAGG
AGAAATTTGGCATAGGGAGGTAGG--AAAAATAATTGCCACTTGTGTCTAACATCAGTTGCCACCTATCGTTGCCGTTAA
CTGCCACCATGTTATCTTGTTGCTTGCCATCCTATTTTATTGGCTGTTGCCAACGCTTAAAAATGATAGCTGGCACCCA
>SNPs
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SS-------S--------------S--------------
-------S------S---------S----S-------S-S--------------------S-------------------
---------S------------------S-----------------------S-----S---------------------
----S--------------------------------------------S----------------------------S-
--S-S-----S-------S---------------SS----S-SS-SS---SSSSS---------S--S------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------SS----S-------S---------------
--------S----------------------------------------------------SSSSSSSSSSSSSSSSSSS
-------------------------------S----S------------------------------S------------
-----------------------S--------S-----------------------------------------------
--------------------------SS-----S-------------S------S-------------------------
--------------------------------------------------------------------S-----------
----------------------------------------S---S------------------------------S--S-
-S---S-------------------S-S--------------S-------------------------------------
----------------------------------------------SSS-SSSSSSS-SS-SSSSSS-SS-SSSS-S---
SSSSSSSSSSSSSSSSSS-S-SS---SSS-S-----S--SSSS----------------S------------S-------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------S-------------------S-----------------S-SS-SSS-SSSS-----------
----------------S--S--------S--------------------S------------------------------
--------------------------------------------------------------------------------
------------------------S-----------S-------------------S---S-------------S-----
---------------------------------------------------------S----------------------
-S------------------------------S-----------------------------SS----------------
----------------------------------------------------------S------------------S-S
---------S----------------------------------------------------------------------
----------------S-----------------------------------------S-----------------S---
-----------------S--------------------------------------------------------------
------------------SSSSSSS--------S-S--------SS-------------------S--------------
------------------------S-----------------S-------------------------------------
-S--S---------------------S----------S----------------SS-----SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-----S--
---------S-S--S-------S--S----------S--SS----S--S-------------------------------
-----S--------------------------------------------------------------------------
---------------------S--------------S-------------S-----S--------S------S-------
--------------------------------------------------------------------------------
--------------SSS------S-----------------------------S----------------------S---
-----S----------------------------S------------S--------------------------------
--------------S-----S---------------S--------------------S----------------S-----
---------------------S---S------------------------------------------------------
----------------S------SSS--S---------------------------------------S----------S
------S------S------------------------------S----------S-----------------------
>forward_95
---------------------------------------------------------------------------AAGGA
AATCGAGTGTCGCGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_1468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TCTCCCGATGCTCCTGTTCT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_1228
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCTCCTTGCTCCACGACAAC----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_2676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CCAGCCGCCTTTCTGTTTTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1940
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTTTGTGCTTGGCGTTGGTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GTACCTCC
ATCGCCTTCCTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
