>input_sequence_48571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------ATGGCGGAGCACAAGGAGGAGTCGGTGATGGACAAGATCACGGAGAAGTTCCA
CGGCGGGTCCTCGTCCTCCTCGTCGTCCGACGACGACGAGAGGAAGTCGGGGTCGTCGTCGTCCGTCAAGGCCAAGATCT
ACCGCCTCTTCGGCCGCGAGAAGCCCGTCCACTCCGTCCTCGGCGGCGGCAAGCGTGAGTCCCC-CCCTCCCCCCG----
--------CT---------CGCGCGCTTCGCTTCCGCCGCGT----GGTTTCGTAGATCCG---GCCGCACCGGGGTCTC
GCGCTCCCGCGGGGCTTGCCCGGGCGCTCAA-------------------------GAGGAAACCTGCGGTTGCTCTGGT
CTCTCTGGAAAATT----TCGTGTCCGTC-GAGATAGGTCTCGCTGATTGCTAGTGTG--------CGTAGGAAGCGTCC
CGATCTGCGATTTTCCGAGCCCAGGTTCCGCGGCATTGCCCGTCCGCAGGGTGTGAATAGGGTAGCATACATCAGATTAG
TACTATTTGTGA----------------------------TTGAAGTGATTGTGCGATTCTGCTGCTCTGCTC-------
---------------TGCTGCATCC---TAGTACTAGCTTAAACCCTGAGATGCTCTGTTTGTTTTCTAGGAGTTGATAG
ATTGCTTGTTGGTCTGGGCTTCTGATGTGCTGTGCTTATGTGTTATT---TTTGCAGCTGCCGACCTCTTCCTGTGGAGG
AACAAGAAGATCTCCGGTGGGGTGCTCGCGGGCGCCACCGCCATCTGGCTGCTGTTTGAGGTCCTGGAGTACCATCTCCT
CACCCTCCTCTGCCACGGCTTCATCCTCACCCTGGGCATCCTCTTCCTCTGGTCCAACGCCTCTGCCTTCGTCAACAAGT
GAGCTTCACTAAATTTCCCTTGTTATTTGCACCCAGATCAGTTA------TAGGATGACAATGCCTGGTTAACCTGGATC
AATGCTGTGTAATCACAATGATCCTAACAGTTTTAGCAA-----------------------------------------
--------------------------TTGCTCTAGTTTTTGGTTGTAAACAACTGCTTGCAATTGTTTT-CAGGTGCCCT
CCCAACATTCCAGAGGTGAAGATCCCCGAGGACCTGGCTGTCAATGTTGCCCGCTCGCTGCGATACGAGATCAACAGGGG
CTTTGCTAGCCTGAGGGCGATTGGTCAAGGCCGTGACCTGAAGAAATTCCTGATTGTACGTTGATTGGTTGTGTGATTTA
GTTTCCTTTAGCCTTCACTGCTTAAACCCTGTTTATGTTATCAGTCGCTTATATTGTGTCGTCTCTTTGTTCTCAGGTGG
TTGCAGGCCTGTGGATCCTCTCTTTCCTTGGCAGCTGCTGCAATTTCCTGACCTTGTTCTACATAGGTAAATGTGGTTTC
TTGCTACAGTCTGTTTGTTACTTACATATGTGCAATAAGCTTGCGTAGCATTGTTTCACTGATCATGCCTTCTTGTTTGC
AGTCTTCATGGTGCTTTACACCGTGCCTGTTCTGTACGAGAAGTATGAGGACAAGATCGATGCTTTTGGAGAGAAGGCCA
TGGTCGAGCTGAAGAAGTACTACGCCATCTTCGATGAGAAGTGCCTGTCCAAGATTCCCAAGGGTCCGTCCAAGGATAAG
AAGCAGCATTAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr1B_1_TraesCS1B01G360800
TAAAATGATAGAAACAATAAGTTCAAACTAGTCAAAATGCATCTAGCATCGGTCTTGCTTTGAAGATTTTGTCCCCCTGA
ATTCAAGTATGTAAACAAAGCTTGGCGAACGAAATATTGGTTCGGAAGTTCCGAGCAATTCAAAATGTCACGGCGAGAAT
AAAATGCAAGTCTTTTGTTTAGAGAGTCTTTGTGTGCATGTCAGTGCGTTTTGTATGTGTACCTCCACTCCTCTAGGCTC
CGGCTCTAGAGCTATCTATATATGCTCAGCTGTTAATTCCGCCATGTCAAAGCTCGAGATCACGATGCTTGCAAACGATC
TTGACGTGCTGCTCACGACGCTGAAC------CGCCCGAAAAACTCGCAAAAAGAATTATCCGGACAAAATTTC-AAAGA
CTTTCGTTTTCGGCAACTGTGCCCTCCGGCCCATAAAAATGACGGGACCGAACCGAGCCGGCG---TCCATCCAGAAGGT
TCCAGCCTGCACGAGCCGCGACCCCGTCCCCGCCGACGGATGCCAGGGCCCCGCCACGCGTCGCCCACACACCATCGGCT
C--CCCATCCCTCCTCGCGATCTCCACCCGTCCGTCCCATTCATTATCATCACCCCGGCCCCCACCTGCGTGGGCCCCAC
GGCAGGAATGACTCCT-CCACCATCCCTGTCGCGGCCGTTGCTGCCGAGAAGTACTCGCCCCGTGCACCCACCCCG--TC
TCCCCACACTCACTGCCCGGTAGGCCCCACGCCCCCGACTCCCGGGGCCGGACCCACGCGAGCAGGAGGCGGCCCCGCGC
GGGCG--------------------------TTTTCCCTGAGCCGTCCGTGCCGAGATGGACGGCTGGGGGGCGCGTCAC
GCGGGG-CACAAAACACGCGGCCCCGAAGCACGGGAAAGGAAAGGAGAGAGGGATTGAGATT---CCAGCGGCGACGGCA
GGCAGGCAGGCAGAAAAGGCGTTGCCAAACAGAAGCGTCGCGTTGGGGAGAGAGGGGGAGC-------------------
---GGCGGGCGAGCGAGCGAAGCATCCATGGCGGAGCACAAGGAGGAGTCGGTGATGGACAAGATCACGGAGAAGTTCCA
CGGCGGGTCCTCGTCCTCCTCGTCGTCCGACGACGACGAGAGGAAGTCGGGGTCGTCGTCGTCCGTCAAGGCCAAGATCT
ACCGCCTCTTCGGCCGCGAGAAGCCCGTCCACTCCGTCCTCGGCGGCGGCAAGCGTGAGTCCCC-CCCTCCCCCCG----
--------CT---------CGCGCGCTTCGCTTCCGCCGCGT----GGTTTCGTAGATCCG---GCCGCACCGGGGTCTC
GCGCTCCCGCGGGGCTTGCCCGGGCGCTCAA-------------------------GAGGAAACCTGCGGTTGCTCTGGT
CTCTCTGGAAAATT----TCGTGTCCGTC-GAGATAGGTCTCGCTGATTGCTAGTGTG--------CGTAGGAAGCGTCC
CGATCTGCGATTTTCCGAGCCCAGGTTCCGCGGCATTGCCCGTCCGCAGGGTGTGAATAGGGTAGCATACATCAGATTAG
TACTATTTGTGA----------------------------TTGAAGTGATTGTGCGATTCTGCTGCTCTGCTC-------
---------------TGCTGCATCC---TAGTACTAGCTTAAACCCTGAGATGCTCTGTTTGTTTTCTAGGAGTTGATAG
ATTGCTTGTTGGTCTGGGCTTCTGATGTGCTGTGCTTATGTGTTATT---TTTGCAGCTGCCGACCTCTTCCTGTGGAGG
AACAAGAAGATCTCCGGTGGGGTGCTCGCGGGCGCCACCGCCATCTGGCTGCTGTTTGAGGTCCTGGAGTACCATCTCCT
CACCCTCCTCTGCCACGGCTTCATCCTCACCCTGGGCATCCTCTTCCTCTGGTCCAACGCCTCTGCCTTCGTCAACAAGT
GAGCTTCACTAAATTTCCCTTGTTATTTGCACCCAGATCAGTTA------TAGGATGACAATGCCTGGTTAACCTGGATC
AATGCTGTGTAATCACAATGATCCTAACAGTTTTAGCAA-----------------------------------------
--------------------------TTGCTCTAGTTTTTGGTTGTAAACAACTGCTTGCAATTGTTTT-CAGGTGCCCT
CCCAACATTCCAGAGGTGAAGATCCCCGAGGACCTGGCTGTCAATGTTGCCCGCTCGCTGCGATACGAGATCAACAGGGG
CTTTGCTAGCCTGAGGGCGATTGGTCAAGGCCGTGACCTGAAGAAATTCCTGATTGTACGTTGATTGGTTGTGTGATTTA
GTTTCCTTTAGCCTTCACTGCTTAAACCCTGTTTATGTTATCAGTCGCTTATATTGTGTCGTCTCTTTGTTCTCAGGTGG
TTGCAGGCCTGTGGATCCTCTCTTTCCTTGGCAGCTGCTGCAATTTCCTGACCTTGTTCTACATAGGTAAATGTGGTTTC
TTGCTACAGTCTGTTTGTTACTTACATATGTGCAATAAGCTTGCGTAGCATTGTTTCACTGATCATGCCTTCTTGTTTGC
AGTCTTCATGGTGCTTTACACCGTGCCTGTTCTGTACGAGAAGTATGAGGACAAGATCGATGCTTTTGGAGAGAAGGCCA
TGGTCGAGCTGAAGAAGTACTACGCCATCTTCGATGAGAAGTGCCTGTCCAAGATTCCCAAGGGTCCGTCCAAGGATAAG
AAGCAGCATTAGAACGGTAGAGAGTACCCTGCGCAGATTTACTTTCAAAGTTGATCACTACTCGTCGGTTTTCAAGGATG
GTTGTGATTCCATGTCCGTAGCTGATAGTAGATACCACTATCTGGTCAAAACC--CTGGCACGGTCAGTAGTCATGACGT
GCAACTTCTACGAACTT-AAAAGTCATGCCAGCTTTTGCTCAATATCCTGTTTCCAATTCTATGTTCAACGTAGCATCCT
CACTTGCAAGTCG-TGTTGGTGTAATATGGCAGTGATGTTTGCGACTTTAGTAGACTTGCTATAATGAATGAAGTGGCTC
-TTTTGGTGTTATGTCATTCCTTGGGTTCATATACACAATGAAGTGGCTCTTTTGGGTGTTCTGTAATTCGTGGGGTTTA
TATC--------GTTTGTTGGTGTCGATATGCCTATGCATCCTGGAGGCTTCAGTTGATTCGGATGAATGTATTGTCTAT
CATGTTTGTGTGCTGAAGCGTCTAGTTAGATTTGTCGGATCACTT-GTGGCTTGTGTATGTATAAACCACCTTGAATTTC
AACGCTCTCTCTTGGGTATTGAGCCTTTGATTGAGAAGTAAATACAGCATTAACATCTTGGAAATTACTCCCTCCTTTCT
TAGATTTGCCTAAATACGGATGTTCAAGTCACGTTTTAGTATTAGATACGCCCTCCGTTCTTTAAAGAATGTACTTTCAA
CTTTGTTGGTGGGTTACGAGGCTGTTTTCCTCTTGTACGTGGCGGCTGCAACCCTAGCTGCCGCCAGAGGCCGATTTTCA
ACGCCGTTCTCCGGCGGCTCCCCTCCGCCGTCGACCTCGGTCGTCGGTGGTGAGGGGGGTCGCCGGATCCACGCGTGTGG
ATCATTTTTACTCTTTCATAGTCTAGGTTTTTAGGTTGTTCATCGTCTTTGCTTCGCCGGCGACGATGACGACGCTGAAT
AAATATTCTTCAGATCCTTTCCTGACGAGGCCATCGGTCCTATGGTTGGGGATGGATCTAGAAATT
>chr1A_313
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AAACAATC
CTGACGTGCTACCCACGACGCTGAACATGAACCGCCCGAAAAGCTCGCGCAAGGAATTCTCCGGAGAAAATTTCAAAAGG
CTTTCGCTTGCGGCAACTGTGCACTCCAGCCCATCAAAAAGACGGGACCGGACCGAGCCGGCG---TCCATCCAGAAGGT
TCCGGCCTATGCGAGCCGCGA-CCCGTCCCCGCCGACGGATGCCAGGGCCCCGCCACGCGTCGCCCGCACACCATCACCC
GCCCGT-TCCCTCCTCGCGATCTCCACCCATCCGTCCCATTCATTATT---------------ACCTGCGTGGGCCCCAC
GGCAGGAATGACTCCCCCCTCCATCCCTGTCGCGGCCGCTGCTGCCGAACAGCACACGGCCCGTGCACC-----------
-CCCCGCGCCCACTGTCCGGTAGGCCCCACGC----------------------------------------------GC
GGGCG--------------------------ATCTCGCGGAGCCGTCCGCGGCGAGATGGACGGCC-GGGGGCGCGTCAC
GCGGGGTCACAAAACACGCGGCCCCGAAGCACGGGAAAGGAAAGGGGAGAGGGATCGAGATT---CCAGCGGCGACGGC-
-------AGGCAGAAAAGGCGTTGCCGAACAGAAGCGTCGCGTTGGG---------------------------------
-CGGGCGAGCGAGCGAGCCAAGCATCCATGGCGGAGCGCAAGGAGGAGTCGGTGATGGACAAGATCACGGAGAAGTTCCA
CGGGGGGTCCTCCTCCTCGTCGTCGTCCGACGACGAGG---GGAGGTCGGGGTCCTCGTCGTCCGTCAAGGCCAAGATCT
ACCGCCTCTTCGGCCGCGAGAAGCCCGTCCACTCCGTCCTCGGCGGCGGCAAGCGTGAGTCCCC-CCCAACACCCGGAAC
CCTAAACCCT---------CCCGCGCCTCGCTTCCGCCGCGT----GGTTTCGTAGATCCGGCGGCCGCATCGGCGTCTC
GCGCTCCCGCGGGGCTTGCCCGCGTGCCCAACGGCTCGTCTCCGTGGTTGTGTAGGGAGGAAATCTGCGGTTGCTCTGGT
CTCCGTGGAAAATTGATCTCGTGTCCGTC-GAGACACGTCTCGCTGATTACTAGTGTGTGTGTGTGTGTAGGAAGCGTCC
CGATCTGCGATTTTCCGGGCCCAGTTTCCGCGGCATTGCCCGTCCGCAGGGTGTGAACAGGGCAGCATGCATCAGATTAA
TACTATTTGTACCGGCAGCTTCTTGTGTTCCTGGGTTGGGTTGAAGTGATTGTGCGATGCTGCTGCTTTGCAGAGGA---
AGCAGCCGAAACTAGTGCTGCATCCTAGTAGTACTAGCTTAAACCCTGGGATGCTTTGTTTGTTTTCTAGGAGTAGATAG
ATTGCTTGTTGGTCTGGGCATCTGATGTGCTGTGCTTATGTGTTGTTATGCTTGCAGCTGCCGACCTCTTCCTGTGGAGG
AACAAGAAGATCTCTGGCGGGGTGCTCGCCGGCGCCACCGCCATCTGGCTGCTGTTTGAGGTCCTGGAGTACCACCTCCT
CACCCTCCTCTGCCACGGCTTCATCCTCACCCTGGGCATCCTCTTCCTCTGGTCCAACGCCTCTGCCTTCGTCAACAAGT
GAGCTTCATCAAATTTCCCTTGTTATTTGCACCCAGATCAGTTGTACTCCTAG-ATGGCAATGCCTAGT-----TGGAAC
AACGCTGTGTGATCACAATGATCATAACAGTTTTAGCAATGGCTCTAGTTTTTGGTTGTAAACAACTGTCTGCAACTACA
ATGATCCTAACACATAGTTTTAGCAATGGGTCTAGTTTGTGGTTGTAAACAACTGCCTGCAATTGTGTTCCAGGTGCCCT
CCCAACATTCCAGAGGTGAAGATCCCTGAGGACCTGGCTGTCAATGTTGCCCGCTCGCTGCGATACGAGATCAACAGGGG
CTTTGCTAGCCTGAGGGCGATTGGTCAAGGCCGTGACCTGAAGAAATTCTTGATTGTACGTTGATTGGTTGTGTGATTTT
GTTTCCTTTAGCCTTCACTGCTGAAACCATGTTTATGTGATCAGTCGCT--TATTGTGTCGTCTCTTTGTTCTCAGGTGG
TTGCAGGCCTGTGGATCCTCTCTTTTCTTGGCAGCTGCTGCAATTTCCTGACCTTGTTCTACATAGGTATATGTGGTTTC
TTGCTACAGTTC----GTTACTTACATATGTGCAATAAGCTTGCCTAGCATTGTTTCACTGATCATGCCTTCTTGTTTGC
AGTCTTCATGGTGCTTTACACCGTGCCTGTTCTGTACGAGAAGTATGAGGACAAGATCGATGCTTTTGGAGAGAAGGCCA
TGGTTGAGCTGAAGAAGTACTACGCCATCTTCGATGAGAAGTGCCTGTCCAAGATTCCCAAGGGCCCGTCCAAGGATAAG
AAGCAGCATTAGAACGGTAGAGAGTACCCTGCGCAGATTTATCTTCAAAGTTGATCACTACTCGTCGGTTTTCAAGGATG
GTTGTGATTCCATGTCCGTAGTTGATAGTAGATACCACTATCTTGTCAAAAACCTCTGGCACGGTCAGTAGTCGTGACGT
GCAACTTCTACGAACTTAAAAAGTCATGCCAGCTTTTGCTGAATATCCTCTTTCCAATGCTATGGTTAACGTAGCATCCT
CACTTGCAAGTTG-TGTTGGTGTAATATGGCAGTGATGTTTGTGACCTTAGTAGACTTGCTACAATGAATGAAGTGGCTC
TTTTTGGTGTTATGTCATTCCTGGGGTTCATATCCACAATGAAGTGGCTCTTTTGGGTGTTGTGTCATTCGTGGGGTTTA
TATC--------GTTTGTTGGTGTTGATATGCCTATGCATTCGTGAGGCTTCAGTTGATTCGGATGAATGTTTTGTCTAT
CATGTTTGTGTGCTGAAGCGTCTAGTTAAATTTGTTGGAACACTT-GTGACCTGTGTATGTATAAACCACCTTGAATTTC
AACGCTTTCTCATGGGTATTGAGCCTGTGATGGAGAAG----TACAGCATTAACATCTTGGAAATTAC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr1D_318
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATC
TTGACATGCTACTCACGACTCTGAACATGAACTGCCCGGAAAGCTCGCAAAAGGATTTCTCCGGACAAAATTTC-AAAGG
CTTTCGGTTGCGGCAACTGTACAGTCCGGCCCATCAAAAAGACGGGACCGAACCGAGCCGGCGGCTTCCATCCAGAAGCT
TCCGGCCTACACGAGCCGCGACCCCGTCCCCGCCGACGGATGCCAGGGCCCCGCCACGCGTCACCCGCACACAGCTTCCG
CCTCCCACCCCTCCTCGCGATCTCCACCAGTCCGCCCCATTCATTATTATCGCCCCGGCCCCCACCTGCGTGGGCCCCAC
GCCAGGAATGACTCCCCC-TCCATCCCTGTCGCGGCCGTTGCTGCCCAGAAGCACTCGCCCCGTGCACCCACCCCGACTC
TCCCCGCGCCCACTGCCCGGCAGGCCCCACGC----------------------------------------------CC
CGGCGCCCGGGGCCAGGCCCACGCGCGGGCAATCTCGCGGAGCCGTCCGCGGCGAGATGGACGGCC-GGGGGCGCGCCGC
GCGGGG-CACAAAACACGCGGCCCCGAAGCACGGGAAAGGAAAGGGGAGAGGGATTGAGATTATTCCAGCGGCGACGGCA
GGCAGGCAGGCAGAAAAGGCGTTGCCGAACGGAAGCGTCGGGTTGGGGAGAGAGAGAGAGAGGGGGAGAGGGAGCGGCGG
GCGGGCGAGCGAGCGAGCGAAGCATCCATGGCGGAGCACAAGGAGGAGTCGGTGATGGACAAGATCACGGAGAAGTTCCA
CGGGGGGTCCTCCTCCTCGTCGTCGTCGGACGACGAGG---GGAAGCTCGGGTCGTCGTCGTCCGTCAAGGCCAAGATCT
ACCGCCTCTTCGGCCGCGAGAAGCCCGTCCACTCCGTCCTCGGCGGCGGCAAGCGTGAGTCCCCTCCCTCCCCCCG----
--------CTCGCGTGCTCCCCGCGCTTCGCTTACGCCGCGCCCGCGGTTTCGTAGATCCGGCCGCCGCATCGGGGTTTC
GCGCTCCCGCGGGGCTAGTCTGAGGGAGGC------------------------------AAATCTGCGGTTGTTCTTGT
CTCTGTGGAAAATT----TCGTGTTCGTCGGAGATAGGCCTCGCTGATTACTAGTGTC--------TGTAGGAAGCGTCC
CGATCTGCGATTTTCGGAGCCCAGGTTCCGCGGCATTGCCCGTCCGCAGGGTGTGAATAGGGTAGCATGCATCAGATTGG
TACTATTTGTGA----------------------------TTGAAGTGATTGTGCGATTCTGCTGCTTTGAAGAGGAAGC
AGCAGCCGAAACTAGTGCTGCATCC---TAGTACTAGCTTAAACCCTGAGATGCTTTGTTTGTTTTCTGGGAGTAGATAG
ATTGCTTGTTGGTCTGGGCTTCTGATGTGCTGTGCTTATGTGTTGTTATATTTGCAGCTGCCGACCTCTTCCTGTGGAGG
AACAAGAAGATCTCTGGCGGGGTGCTCGCGGGCGCCACCGCCATCTGGCTGCTGTTTGAGGTCCTGGAGTACCATCTCCT
CACCCTCCTCTGCCACGGCTTCATCCTCACCCTGGGCATCCTCTTCCTCTGGTCCAACGCCTCTGCCTTCGTCAACAAGT
GAGCTTCATCAAATTTCCCTTGTTACTTGCACCCATATCAGTTA------TAG-ATGGCAATGCCTAGT-----TGGAAC
AACGCTGTGTGATCACAATGATCCTAACAGTTTTAGCAA-----------------------------------------
--------------------------TGGGTCTAGTTTGTGGTTGTAAACAACTGCCTGCAATTGTTTT-CAGGTGCCCT
CCCAACATTCCAGAGGTGAAGATCCCCGAGGACCTGGCTGTCAATGTTGCCCGCTCGCTGCGATACGAGATCAACAGGGG
CTTTGCTAGCCTGAGGGCGATTGGTCAAGGCCGTGACCTGAAGAAATTCCTGATTGTACGTTGATTGGTTGCGTGATTTA
GTTTCCTTTAACCTTCACTGCTTAAACCCTGTCTATGTGATCAGTCGCT--TATTGTGTCGTCTCTTTGTTCTCAGGTGG
TTGCAGGCCTGTGGATCCTCTCTTTTCTTGGCAGCTGCTGCAATTTCCTGACCTTGTTCTACATAGGTAAATGTGGTTTC
TTGCTACAGTCTGTTTGTTACTTACATATGTGCAATAAGCTTGCCTAGCATTGTTTCGCTGATCATGCCTTCTTGTTTGC
AGTCTTCATGGTGCTTTACACCGTGCCTGTTCTGTACGAGAAGTATGAGGACAAGATCGATGCTTTTGGAGAGAAGGCCA
TGGTCGAGCTGAAGAAGTACTATGCCATCTTCGATGAGAAGTGCCTGTCCAAGATTCCCAAGGGTCCGTCCAAGGATAAG
AAGCAGCATTAGAACGGTAGAGAGTACCCTGTGCAGATTTGTCTTCAAAGTTGATCACTACTCGTCGGTTTTCAAGGATG
GTTGTGATTCCATGTCCGTAGCTGATAGTAGATACCACTATCTGGTCAAAACC--CTGGCACGGTCAGTAGTCGTGACGT
GCAACTTCTACGAACTT-AAAAGTCATGCCAGCTTTTGCTCAATATCCTGTTTCCAATTCTATGTTTAACGTAGCATCCT
CACTTGCAAGTTGGTGTTGGTGTAATATGGCAGTGATGTTTGCGACTTTAGTAGACTTGCTACAATGAATGAAGTGGCTC
TTTTGGGTGTTATGTCATTCCTGGGGTTCATATCCACAATGAAGTGGCTCTTTTGGGTGTTATGTCATTTGTGGGGTTTA
TCGTTTGTTGGTGTTTGTTGTTGTTGATATGCCTATGCATTCGTGAGGCTTCAGTTTATTCGGATGAATGTTTTGTCTAT
CATGTTTGTGTGCTGAAGCGTCTGGTTAGATTTGTCGGATCACTTTGTGACTTGTGTTTGTATAAACCACCTTGAATTTC
AACGCTCTCTCTTGGGTATTGAGCCTGTGGTGGGGAAG----TAAGTACATCATAACTTGGAAATTAC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---
----------S-------------------------------S---------S-----S--------------------S
------S--S------------S-----------S----S----------------------------------------
---S----S---------------------------------------------------------S---------SS-S
-----------------------------------------------S---S----------------------------
---------------S---S--------------------------------S---------------------------
-----S-S-S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
-------------------------------S-S--S-S----------S-S-------------SS-------------
---------------------------------------------S----------------------------------
--------------------------S---------------------------S-S---S-------------------
-------S------------------------------------------------------------------------
---S--------S-----S-----------------S-SSS---------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------------------------S---------
----------------------S-S--S-----------------------------------S----------------
----S--------------------------------------------S----------------S-------------
--------------------------------------------------------------------S-----------
-------------------------------------------------------------------S---SS-------
-------------------------------------------------------S------------------S-----
--------------------------------------------S-----------------------------------
--------------S--S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------SS-------------------------------------------S---S--------S--SSSSS----S-
--S-------S---------------------------------------------------------------------
---------------------------S-S--------S-----------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S----------SS-----------------------------
-------------------------S------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------SS-------------------------------------
-------------------------------------------------------------------------S------
------------------------------------------------------------------S-------------
-----------S--------------------------------------------------S-----------------
----------------------S----------S---------------------------S---S--------------
------------------------S---------------S-SS---------------------------S--------
-------------------------------------------------S------------------------------
--------------------------S----S------SSSS--------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACCTCCACTCCTCTAGGCTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_1383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GGCGCTCAAGAGGAAACCT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_283
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCTCAGCTGTTAATTCCGCC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_1490
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GCTAGTGTGCGTAGGAAGCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AAGCACGGGAAAGGAAAGGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CAACGTAGCATCCT
CACTTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
