>input_sequence_48556
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-------------------------------------------------ATGCTCCCTCTGTTGCA--------------
-ACGAGCTAGCCTACCATCACCACCACCACCAGCAGCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACTTGC
GTCCCATTAATTAAAGGTACGCGCCATTTGATCGATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCAT
GTGCT---TCGTCAGATCGGCCTCAGACAGATCAGAGCCTCGCTAGCT----ACTTGGATGTATAGCTCATATCCGATTT
CTTATTAGTAGGTG---GCAAGATGGATCCTGGCTTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCG
GTGGAGACGGTGGCGCGGCCGGTGATGTCGTTAATGTTGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTG
GACGAGGCGCTCGCGGCCGCGATCATGGAGCTGCAAGGCATCCAGGTGCCGTGCGCAGGTGGCAAGCCGATGGCCGGCGG
CCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACGGGGACGGCACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTG
TCTTGCAGCGACAGCAGCATCAACATCGCCATCAGGGCGTGATGGGGATGCCTGTCGACTACGACCTCGTACCAGCAGCA
CGAGCTGTCACGTTGGCTACTGTACCTGCGGCACCTTCCTTCCCAAAAGGCGCGGCT---------------GCCGGCGT
CGTCGATGCGGCGGCCTTTGACTCCGGCAATAACGCGCTGACATCGGCGGTAACAGCAGGGACGACGAGGCAGTGTGACG
AAGCCAACGGTGGTGCCAAAAGGCAACTCCGGTCAAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCGGCCGCCGAC
GGGCACCCGCAGTCGCAGGAGAACCCTCTCTGCAGCCTCCTCGCGTACACCAACACCGGAGATGGCGGCATCCAGATTGC
GTTCAGCGGCGGCGGCGGTGCTGCGCCGTCCTCCAAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCT
TTGACGGCAGAAGTTCCGTCAACAACGGCTGCGACGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTG
AAGGAGATGATCTATCGCGCGGCGGCGATGCGGCCGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAG
CAGGCGCAACGTGCGCATCTCGTCCGACCCGCAGACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGC
GCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAAGATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGC
TTCCTCAAGTCGCAGCTCAGGGAGCTGCAAACCCTAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCAT
GGCGCCACTGATGAGCTACAACAACATGCCGGCCTTCGCCTTCCCGGCGACAGGAGCCGGCGAAACCCTAGGAGGAGGAG
GAGGAGAGGAGGCTTTCATGAGCAGCCGGTTTAGATAG------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr3A_1_TraesCS3A01G207300
AATGGTCAAGAGTGGTATTCTTCAACCTCCCAATCTCCTAGTTCATCTTCTTCCTCAAGACTTGCCACGACCACCGGCCT
AACCGCCTGCCTCTATAGCCTGCGGCCGGCGGCGCTTTCGCACCAGCCTCGCCGCCCA-CCCTCCCCTCACCACCACTCA
CCGCTGCGCTAGCCCCAGCCCTGGCCATGCTTCTAAACCGGCGAACCACTAGAATTTCCTACGAGCCCACACCCCCTTGC
TCCCCATACCGTCAACCTTTTGGACTCGCCTCCGCCTGCACATCGCCGGCTACGGCTCCTTCCTGGCTAATGCCTTGCCG
GCGCCCCGGTCCTCGCTATGCTCACCCTG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GCATGCTT
CCTTCTGACTGACCCAAATTGTAAAACCCGGCAACTTACCTCTAGATAAATTTTGAAATAACTAATGTACCAGTAGTACT
AGTACTTGTATAATTGAGCGCTATCCCCTACCTACACAACCCTAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGT
AAGTACTAAAAGCTCTAGGCATGTTAGCAAGCTTA--TATTTCAGAACCCACACAATCAAGAGCATTAATATGACAGGCA
TACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGCTGTGGCTATAGCTAGAGCCTAGATGTGTGCATCGCTGCACTG
CACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGGTAGTGTGCTGTGTAGTGTGTACTAGTAGTAAAAGGTATACAA
CTGTGTGTACTA---------------------------ACTAGACAGTACAGTATACCACCATAGC-CATAGG-----C
----CATCTATTCTTTGGCCTGCCTCTTTATAAGAGCCTGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGA
GCACAC--CACACACACACACACGCTGCGC----GCAGGGCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTAT
TGCGCCATTAGCATCTTCCTCCTCGAGTGAGCTAGCGTTTAATGCGCGAATGCTCCCTCTGTTGCA--------------
-ACGAGCTAGCCTACCATCACCACCACCACCAGCAGCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACTTGC
GTCCCATTAATTAAAGGTACGCGCCATTTGATCGATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCAT
GTGCT---TCGTCAGATCGGCCTCAGACAGATCAGAGCCTCGCTAGCT----ACTTGGATGTATAGCTCATATCCGATTT
CTTATTAGTAGGTG---GCAAGATGGATCCTGGCTTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCG
GTGGAGACGGTGGCGCGGCCGGTGATGTCGTTAATGTTGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTG
GACGAGGCGCTCGCGGCCGCGATCATGGAGCTGCAAGGCATCCAGGTGCCGTGCGCAGGTGGCAAGCCGATGGCCGGCGG
CCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACGGGGACGGCACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTG
TCTTGCAGCGACAGCAGCATCAACATCGCCATCAGGGCGTGATGGGGATGCCTGTCGACTACGACCTCGTACCAGCAGCA
CGAGCTGTCACGTTGGCTACTGTACCTGCGGCACCTTCCTTCCCAAAAGGCGCGGCT---------------GCCGGCGT
CGTCGATGCGGCGGCCTTTGACTCCGGCAATAACGCGCTGACATCGGCGGTAACAGCAGGGACGACGAGGCAGTGTGACG
AAGCCAACGGTGGTGCCAAAAGGCAACTCCGGTCAAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCGGCCGCCGAC
GGGCACCCGCAGTCGCAGGAGAACCCTCTCTGCAGCCTCCTCGCGTACACCAACACCGGAGATGGCGGCATCCAGATTGC
GTTCAGCGGCGGCGGCGGTGCTGCGCCGTCCTCCAAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCT
TTGACGGCAGAAGTTCCGTCAACAACGGCTGCGACGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTG
AAGGAGATGATCTATCGCGCGGCGGCGATGCGGCCGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAG
CAGGCGCAACGTGCGCATCTCGTCCGACCCGCAGACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGC
GCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAAGATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGC
TTCCTCAAGTCGCAGCTCAGGGAGCTGCAAACCCTAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCAT
GGCGCCACTGATGAGCTACAACAACATGCCGGCCTTCGCCTTCCCGGCGACAGGAGCCGGCGAAACCCTAGGAGGAGGAG
GAGGAGAGGAGGCTTTCATGAGCAGCCGGTTTAGATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGT
GTTGTGCCCAATGTAAGACCATGCATCGATCAGAAGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCAT
GTCAATCGATGAAATTAATCATGATGTCATCGTCTTCACCTTT---CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TGT----TTGATGAATAATTCTGCATGCATGCATCCGGCCTGTACGTGCTTTTACAAATTTTATTAGAGACTCTTTGGGC
GAGCAGCAGAAAAGGAGCGAGAGCTTGGAAAGTTTTTTGCTCCTCCTTTTGATCAGTTTAATTAGTCTTCGTCGTCTCCA
TCTTTTCATGTGGCAAGCATGTAGACGCGTGAAAGCAAA-GCTTTTCCAGCGGGCGTGTGTGCTTTATAAGTTCCGATCC
ATATGGTAATGGAGTAGCAGCAGCTCCAAACATCATCATGACAACTTTCTAAGTCGTAATTATGGCCTCTTTGAAAGAGA
AAGGCCTTTT-CTTTGTGCATGCAAAACCCTACCGAAAAGGGCCGGGATCGATCGAGGAGAAAGGAAGAAGAGAGGGCAA
AAATCATGGCTTCATCATTGCACACTTTCTGGTCGTCGTCGTCGTCGTCGTTGCTAGGGAAGCAAAGCAGAGGGAAAGAA
AGCATGCAATGCATGGTTAATC----AACTGTTTGAGTTGTAT--GATCGAGGAGACGTGTGGTGTCGTG----------
--GCGATGCCGATGCCGATGCCGATGGTTCGTGCAGTGTTTCAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGG
GTGAGCTTTTTAGACGGCCGGGTTCAGGCACTCGCTGCATCAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTT
TTGATTCAAAAATGCACGCCTTTTGGTCCTCGGGTTGTGTGTCAAAATTCTCGATGAGATGCTGTCGTAACCTCTGAATC
TTGGTGAGATTTGTTCGTCATGACC
>chr3D_3
--TGGTCAAGAGTGGTATTCTTCAACCTCCCGATATCCTTGTTCATCTTCTTCCCCAAGACCTTCTAGGACCACCGGCCT
AACCGCCTGCCTCTGTAGCCTGCGGCCGGCGGCGCTTTCGTGCCAGCCTCGCCGCCCTGCCCTCCCCTCACCACCGCTCG
CCGCCGCGCTAGCCCCAGCCCCGGCCATGCTTCTAAACCGGTGAACCACCAAAATTTCTTACGAG---ACACCCCCTCGC
TCCCCATACCGTCAACCTTT-GGACTCGCCTCCGCCTGCACGTCGCCGGGTACGACTCCTTCCTGGCCAATGCCTTGCCG
GCGCCCTGGTCCTCGCTACGCTCAGACTAGCCACAATGGGTAGTAACATAGAGTAGTAACATGCCCATGTTACTACTCTA
TGTTACTACCTCTATAGTGGGGAGTAACATATGTGTGGTAACATGCAACGCTTCATTTATTAGGCTATAAACTCATCTTG
TATTGATATGTGTGATGTTACTCATACTAGTAGTAACTAGCTATGTTACCATATGCCTCTCTTTCTTCATTTATTGCTTG
TCACATTATCTATTTTATCTAAATATGTGTGATGTTACTATCTATGTTACTCCCAGTGTGGGTAGTCTCACCGCATGCTT
CCTTGTGACTGACCCGAATTCTAAAACCCGGCAACTTACCCCTAGATAAATTTTGAAATTACTGATGTACCGG------T
AGTACTTGTATAATTGAGCCCTACCCCCTACCTACACAGCCCAAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGT
AAGTACTAAAAGCCCTAGGCATGTTAGCAAGCTTA--TATTTCAGAACCCACACAATCAAGAGCATTAATATGGTAGGCA
TACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGCTGTGGGTATAG-------CTAGATGTGTGCATCGCTGCACTG
CACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGGTAGTGTGCTGTGTAGTAACAAGTACTACTAC-----------
------------------------TATACAAGTGTATGTACTAGACAGTACAGTACACCACCATAGG-CATAGGTGCAAC
CATGCATCTATTCTTTGGCCTGCCTCTTTATAAGAGCCTGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGA
GCACACCACACACACACACACACGCTGCGCGCAGGCAGGGCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTAT
TGCGCCATTAGCATCTTCCTCCTCCAGCGAGCTAGCGTTTAATGCGCAAATGCTCCCTCTGTTGCTCCAATATATCCACA
CACGAGCTAGCCTACCATCACCACCAG---CAGCATCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACCTGC
GTCCCATTAATTAAAGGTACGCGCCATTTGGTCGATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCAT
GTGCTTCATCATCGGATCGGCCTCACACAGATCAGAGCCTCGCTAGCT----ACTTGGATGTATAGCTCATATCCGATTT
CTTATTAGTAGGTGCTGGCAAGATGGATCCTGGCTTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCG
GTGGAGACGGTGGCGCGGCCGGTGATGTCGTTCATGTCGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTG
GACGAGGCGCTCGCCGCCGCGATCATGGAACTGCAGGGCATCCAGGTGCCGTGCGGAGGTGGCAAGCCCATGGCCGGCGG
CCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACGGGGACAGGACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTG
TCCTGCAGCGACAGCAGCATCAACATCGCCATCAGGGCGTGATGGGGATGCCTGCCGACTACGACCTCGTACCAGCAGCA
CGAGCTGTCACGTTGGCTACTGTACCTGCGGCACCTTCCTTCCCAAAAGGCGCGGCTGCCGCCGTTGACCGCGCCGGCGT
CGTCGATGCGGCGGTCTTTGACTCCGGCAATAACGGGCCCACATCGGCGGCAAAAACAGGGACGACGAGGCAGTGGGACG
AAGCCAACGGTGGTGCCAAAAGGCAACGCCGGTCAAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCAGCCGCCGAC
GG------GCACTCGCAGGAGAACCCTCTCTGCAGCATCCTCGCGTCCACCAACACCGGGGATGGCGGCATCCAGATTGC
GTTCAGCAGCGGCGGCGGTGCTGCGTCGTCCTCCAAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCT
TTGACGGCAGAAGCTCCGTCAACAACGGCTGCGACGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTG
AAGGAGATGATCTATCGCGCGGCGGCGATGCGGCCGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAG
CAGGCGCAACGTGCGCATATCGTCCGACCCGCAGACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGC
GCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAAGATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGC
TTCCTCAAGTCCCAGATCAGGGAGCTGCAAACCCTAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCAT
GGCGCCACTGATGAGCTACAACAACATGCCGGCCTTCGCCTTCCCGGCGACAGGAGCCAGCGAAACCCTAGGAGGAGGAG
---GAGAGGAGGCTTTCATGAGCAGCCGGTTTAGATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGT
GTTGTGCCCAATGTAAGACCATGCATCGATCAGAAGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCAT
GTCGATCGATGAAATTAATCATGATGTCGTCGTCTTCACCTTT---C------TTCTTCTTCTTCTTCTCCTTCTCCTTC
TGTTAGATTGATGAATAATTCTGCATGCATGCATCCGGCCTGTACGTGCTTTTACAAATTTTATTAGAGACTCTTTGGGC
GAGCAGCAGAAAAGGAGCGAGGGCTTGGAAAGTTTTTTGCTCCTCCT-TTGATCAGTTTAATTAGTCGTCGTCGTCTCCA
TCTTTTCATGTGGCAAGCATGTAGACGCGTGAAAGCAAAAGCTTTTCCAGCGGGCGTGTGTGCTTTCTAAGTTCCGATCC
ATATGGTAATGGAGTAGCAGCAGCTCCAAACATCATCATGACAACTTTCTAAGGCGTAATTATGGCCTCTTTGAAAGAGA
AATGCC-TTT-CTTTGTGCATGCAAAACCCTACCGAAAAGGGCCGGGATCGATCGAGGAGGAAGGAAGAAGAGAGGGCAA
AAATCATGGCTTCATCATTGCACACTTTCTGGTCGTCGTCGTCGTCGT---TGCTAGGGAAGCAAAGCAGAGGGAAAGAA
AGCATGCAATGCATGGTTAATTCTAAAACTGTTTGAGTTGTATATGATCGAGGAGACGTGTGGTGTCGTG----------
--CCGATGCCGATGCCG------ATGGTTCGTGCAGTGTTTGAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGG
GTGAGCTTTTTAGACGGCCGGGGTCAGGCACTCGCTGCATCAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTT
TTGATTCAAAAATGCACGCCTTTTGGTCCTCGGGCTGCGTGTCAAAATTCTTGATGAGATGCTGTCGTAACCTTTGAATC
TTGATGAGATTTTTT----------
>chr3B_3
--TGGTCAAGATTGGTATTCTTCAGCCTCCCGATCTCCTTGTTCATCTTCTTCCCCAAGACTTGCCAGGACCACCTGCCT
AACCGCCTGCCTCTATTGCCTGCGGCCGGCAGCGCTTTCGCGCCAGCCTCGCCGCCCCGCCCTCCCCTCACCACCACTTG
CCGCCGCGCTAGCCCCAGCCCCGGCGATGCTTCTAGACTGGTGAACCATCAAAATTTCTTACTGAGAT--ACCCCCTCGC
TCCCCATACCGTCAACCTTT-GGACTCGCCTCCTCCTGCATGTCGCCGGGTATGACTCCTTCCTGGCCGATGCCTTACCG
GCGCCTCGGTCCTCGCTACGCTCACCCCG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GCATGCTT
CCTTCTGACTGACCCAAATTCTAAAACCCGGCAACTTACCTCTAGATAAAATTTTAAATTACTGATGTACTGG------T
AGTACTTGTATAACTGAGCCCTACCCCCTGCCTACACAGCCCAAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGT
AAGTACTAAAAGCCCTAGGCATGTTAGCAAGCTTATATATTTCAGAACCCACACAATCAAGAGCATTAATATGATAGGCA
TACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGGC-----TATAG-------CTAGATGTGTGCATCGTTGCACTG
CACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGGTAGTCTGCTGTGTAGTGTGTACTAGTAGTAACAAGTATACAA
GTGTATGTTTGGCAAAAAAAAAAGTATACAAGTGTATGTACTAGACAGTACAGTACACCACCATAAGCCATAGGTGCAAC
----CATCTATTCTTTGGCCTGCCTCTTTATAAGAGCCTGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGA
GCACAC--CACACACACACACACGCTGCGCGCAGGCAGGGCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTAT
TGCGCCATTAGCATCTTCCTCCTCCAGCGAGCTAGCGTTTAATGCGCGAATGCTCCCTCTGTTGCTCCAATATATCAACA
CACGAGCCAGCCTACCATCACCACCAC---------------CAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACTTGC
GTCCCATTAATTAAAGGTACGCGCCATTTGATCGATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCAT
GCGCT---TCATCGGATCGGCCTCAGACAGATCAGAGCCTCGCTATCTACGTACTTGGATATATAGCTCATACCCGATTT
CTTATTAGTAGG---TGGCAAGATGGATCCTGGCTTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCG
GTGGAGACGGTGGCGCGGCCGGTGATGTCGTTAATGTTGTGGACGGGAGCGGCATGTCGGTGCTGGAGAGGCTGGTGCTG
GACGAGGCGCTCGCGGCCGCGATCATGGAGCTGCAGGGCATCCAGGTGCCGTGCGGAGGTGGCAAGCCGATGGCCGGCGG
CATCGAGGCGGCCAGCCTCGCATTCGGCGCTACGGGAACGGGACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTG
TCCTGCAGCGACAGCAGCATCAACATCGCCATCAGGGCGTGATGGGGATGCCTGTCGACTACGACCTCGTACCAGCAGCA
CGAGCTGTCACGTTGGCTACTGTACCTGCGGCACCTTCCTTCCCAAAAGGCGCGGCTGCCGCCGTTGACCGCGCCGGCGT
CGCCGATGCGGCGGTCTTTGACTCCGGCAATAACGCGCCGGCATCGGCGGTAATAGCAGGGATGACGAGGCAGTGGGACG
AAGCCAACGGTTGTGCCAAAAGGCAACGCCGGTCAAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCGGCCGCCGAC
GG------GCACTCGCAGGAGAACCCTCTCTGCAGCCTCCTCGCGTCCACCAACACCGGGGATCGCGGCATTCAGATTGC
GTTCAGCAGCGGCGGCGGTGCTGCGCCGTCCTCCAAGCGCACCAAGCCGTCGCTGAGCAGTACCTCGTCCAGCATCAGCT
TTGACGGCAGAAGCTCCGTCAACAACGGCTGCGACGACGTCCCCCAGTACGAACCGGACACGGAGGCCCTGGCGCAGGTG
AAGGAGATGATCTACCGCGCGGCGGCGATGCGGCCGTTGAGCCTCGGCGCCGAGGAGGAAGACACCGGCGAGCGGCCAAG
CAGGCGCAACGTGCGCATCTCGTCCGACCCGCAGACGGTGGCGGCGCGCCAGCGGCGGGAACGCATCAGCGAGCGGCTGC
GCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAAGATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGC
TTCCTCAAGTCACAGATCAGGGAGCTGCAAACCCTGGACCGCCGGAATTACGGCGCAAATGCCATATCGAACACAGGCAT
GGCGCCAATGATGAGCTACAACAATATGCCGGCCTTCGCCTTCCCGGCGACAGGAGCCGGCGAAACCCTAGGAAGAGGAG
---GAGAGGAGGCTTTCATAAGCAGCCGGTTTAGATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGT
GTTGTGCCCAATGTAAGACCATGCATCGATCAGAAGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCAT
GTCGGTCGATGAAATTAATCATAATGTCGTCGTCTTCACCTTTTTTC------TTCTTCTTCTTCTTCTTCTTCTCCTTC
TGTTTGATTGATGAATAATTTTGCATGCATGCATCCGGC---TACGTGCTTTTACAAATTTTATTAGAGACTCTATGAGC
GAGCAGCAGAAAAGGAGCGATGGCTTGGAAAGTTTTTTGCTCCTCCTTTTGATCAGTTTAATTAGTCGTCGTTGTCTCCA
TCTTTTCATGTGGCAAGCATGTAGACGCGTGAAGC--AAAGCTTTTCCAGCGGGCGTGTGTGCTTTCTAAGTTCCGA---
------------------------TCCAAACATCATCATGACAACTTTCTAAGTCGTAATTATGGCCTCTTTGAAAGAGA
AAGGCC-TTTTCTTTGTGCATGCAAAACCCTACCGAAAAGGGCCGAGATCGATCGAGGAGAAAGGAAGAAGAGAGGGCAA
AAATCATGGCTTAATCATTGCACACTTTCTGGTCGTCGTCGTCGTCGTCGTAGCTAGGGAAGCAATACAGAGGGAAAGAA
AGCATGCAATGCATGGTTAATC----AACTGTTTGAGTTGTA-ATGATCGAGGAGACGTGTGGTGTCGTGGCAATGCCGA
TGCCGATGCCGATGCCG------ATGGTTCGTGCAGTGTTTGAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGG
GTGAGCTTTTTAGACGGCCGGGGTCAGGCACTCGCTGCATCAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTT
TTGATTCAAAAATGCACGCCTTTTGGTCCTCGAGCTGCGTGTCAAAATTCTTGATGAGATGCTGTCGTA-----------
-------------------------
>SNPs
SS-----------------------------S-------S--------------S------------S------------
-----------------------------------------S---------------S---------------------S
----S----------------S-------------------S-------S-S------S------SSS---------S--
--------------------S--------------------S-------S----S------------S------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------------------------------S---S-------S-SSSSSS-
-------------------S---S--------------S---S-------------------------------------
-------------S------------------------------------------------------------S-----
-------------------------------------------S-----SSSSSSS------------------------
---------------------------------------------------------------------S-S--------
S---S---SSSS-------------------------------------------S----------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--S-------------------------------------S--------------
---------------------------SSS-----S--------------------------------------------
--------------------------------------------------------------------------------
----------S--S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------------S------------------------
-----------------------------------------S--------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------S--------------S---------------------S----
---------------------------S----------------------------------------------------
--SSSSSS---S----------------------------------S------------S--------------------
-------S------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------S---S----------------------------------------------------------------
--------------------------------------------------------------------------------
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S------------------------S------------------SSSSSS----------------------S----
--------------------------------------------------------------------------------
---------------------S---------------------------------------------S------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--------------SSSSSS------------------S--------------------------------------
----------------------S---------------------------------------------------------
----------------------------------S--S-------------S---------------------S------
---S--------S--SSSSSSSSSS
>forward_930
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------------------------------AGCTGTGCTGTGGCTATAGC------------------------------
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>reverse_2300
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-----------------------------------------------------------AGATGGCGGCATCCAGATTG-
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-------------------------
>forward_1390
--------------------------------------------------------------------------------
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----------CCTACCATCACCACCACCAC--------------------------------------------------
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>reverse_2883
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--GGAGAGGAGGCTTTCATGAGC---------------------------------------------------------
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>forward_1531
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-----------------------------------------------------------------------CGGTAGTTG
CATGTGCTTCG---------------------------------------------------------------------
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>reverse_3447
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------TTTTCTTTGTGCATGCAAAACCC---------------------------------------------------
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-------------------------
