>input_sequence_48534
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-----------------------------------------------------------------------------ATG
GTCATGGAGATGGCGAGCGCGAGGAGGCGGGCGAGGCAGCTCAGCGGCGACCACGCCGTGCTCTGGAGCGCCTGCGTCCT
CCTCTCCGCCGCCTCGCTGCTCCTCGCCGCCACCCTCTCCTCGGGCTTCGGGGCCGCCAGGCTC---GCCGGGGAGGTCA
GCGTGGTCGTCAGGGCACGCGCCGGCGCCGTCGTCTTGACG---ACGGACGGAGACGCCGCCGTCGACAACGCCCGCCGG
TACTGCGGCCACGTTGATCACGACGGCATGTTAACCGACGGCGAGTGGGTGCGCGAGGAAGCGGGCGTGGCCCCCCTGTA
CGACTCGAGGGAGTGCCCTTTCGTCGACGTGGGGTTCCAGTGCCGGGAGAACGGCCGGCCGGACGACGGGTACGCCAGGT
GGAGGTGGCGTCCGAGGCGCTGCGAGCTCCCGAGGTTTGCACCATGGCGGCATG----GTTTCATGGATGGAACTGCACT
TTTTTATTATTATCTGTTATTAGTTAACAACTTAACATTGCTCGTCGATCGCTTGCAGGTTCGACGCCGAGAAACTGCTG
GAGGTGCTCCGGAACCGCCGGCTGGTGTTCGTCGGCGACTCGATCGGGCGCAACCAGTGGGAGTCGATGCTCTGCATGCT
CTCCTCCGCCGTCGCCGACGCCGGGGCCTCGGTGCGCGAGGAGCACGGGAGCCCCATCACCAAGCACAAGGGCTTCCTCT
CCTTCCGGTTCCTTCGCCACAACCTCACGGTGGAGCACTACCGGTCGCCGTACCTGGTCCGGCGCGGCGGCCGCCCCCGC
CGCGCGCCCAGGCACGTCCGCTCCACGCTCCAGCTCCGCGCTATGGACTCCAGGGCGCACCTGTGGAAGGGCGCCGACGT
GCTCGTCTTCAACTCCGGCCACTGGTGGAACCACGACCGGCTCCAGCAGCTGTATGTGTGTTTTATGG-------ATCGC
TTAAAATGGCTGCTCCTCGGG------TTCCATGGCTTGACCTTGCTGTGCCAGGCATTGCTACTTCCAGGAAGGCAAGA
GGCTGAGGCTGGACATGAGCGTGGAGGCGGCCTACCAGAGGGCCATGGACACAGTGCACGAATGGGTCCAGAAGGAGGTG
GACGGCAGCAAGACCCTGGCCGTGTTCAGAACCTACTCGCCGGCGCACAATAGGCACGTCTCCTCTGCTGGT-CTTGTGA
ATTTCAGCCATGATTTGCACAGATAAGTAGC-AATTTGCTTGTTGCTTTGCAGGGGCACAAATGGCGGGAGCTGCGGCAA
GGAGACGCTGCCGGAGCTGAACATGACCGGAATCTCGCTGGGCCGGTGGCCGGGAATGCTGCAGCCGGCGTTTGGGGGAC
CGGAATCGGCCGTGGTGAGGGAC------CTGCGTGTGATGAACGTGACGCTGATGACGGCGCACAGGAGGGACGGCCAC
CCGGCGGTGTACAATGTGGAGCCGTCGGCGAGGATGCTGGTGGGGCAGAGGGAGGACTGCAGCCACTGGTGCCTGCCCGG
TGTGCCCGACGCGTGGAACGAGCTCCTCTACGCCATGGTTCTCGCCAGGCTTTCTTAG----------------------
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----------
>chr2D_1_TraesCS2D01G137000
GTAGTTGTACTTTCTT-TATTGACGCGTTC-AAGCTCCAGAGCTTGATTATCATCATCATCAA-----------------
-------------------------------------------------------------------------TAGCTAA
AAAGTATTCTACTCGTTCCTAGTTTCCTGCCCCCGATGAGGTATTTAGCTCATACAGGTGCGAACATTGTGGTGTGAATG
GATGTAGCGGGACAGTGATAGCAGGTTTGGGTGAGGAAGTGCAGACTAGCGAGACGAACCTGAGTGATTTTGGACCAACT
TCTTGTTCTTGCTTAAACAC---GAGACGAGGCTAC---------------TACAAGCATACCCTATATAACACCACGAA
ACATGACGATTGGCACTTTGGCAGCGGAATATTTTTTCAACCAGGAAAGCCAAAGACGGGGCTTGAGCATGTGCACGGCT
TTGCGCCCACACCAGCTCTCTGCCTGGTGCAGGGT----GGCCG----ATGAGAGCGGCCAGACTCCTGGCTATCGATAT
CGTCATATCTAGCACGCGGG----------------------------------------CGCGACCGGCGTGGTGTGAG
GGCCGGGCACGGCGAGGCCGGAGGCGCGGAGATGAGAGGCTCCATCGTGCCGTGCATGCCCTCCCGACCGGGCAGCGGAT
CTAGCTGCCGGCGGGGCTGGCATGTAC----TGTACTAGTTCGAGCATATCTCCTCTCTTCTGACATGTGCACACAAATG
GCAGTGACACACAAATCCGAGGTATATATACACGCAACGGCGCAAATACTTCCAACCGCACCCCGCCATCGCTTCTTCGG
GCTCTCCGGAGCCGGGGCACACCATGCCAAGTTCCCTCCACTACCAGCGCGTCGGTTCCTCCACTGAATCCAGGAGCAAC
CGAA---CAAAGCAACCGTTCTCTCTTCCTTCCTCACTTTGTTTCAGCGAAAGCAACCGTTCTCAAAACACAAGAAG---
-------------AAACCAGAGCAGATTTTTC------ACGCCAGCAAGCGATCAAACCCAAGCGATCGATCCTCT----
---GTGCTACTATTACGTGCCATGCCAC---GCAGATACGGCCAAGTCTCGAGCGGCAGCGGGGAGGAGAGCGCGTCATG
GTCATGGAGATGGCGAGCGCGAGGAGGCGGGCGAGGCAGCTCAGCGGCGACCACGCCGTGCTCTGGAGCGCCTGCGTCCT
CCTCTCCGCCGCCTCGCTGCTCCTCGCCGCCACCCTCTCCTCGGGCTTCGGGGCCGCCAGGCTC---GCCGGGGAGGTCA
GCGTGGTCGTCAGGGCACGCGCCGGCGCCGTCGTCTTGACG---ACGGACGGAGACGCCGCCGTCGACAACGCCCGCCGG
TACTGCGGCCACGTTGATCACGACGGCATGTTAACCGACGGCGAGTGGGTGCGCGAGGAAGCGGGCGTGGCCCCCCTGTA
CGACTCGAGGGAGTGCCCTTTCGTCGACGTGGGGTTCCAGTGCCGGGAGAACGGCCGGCCGGACGACGGGTACGCCAGGT
GGAGGTGGCGTCCGAGGCGCTGCGAGCTCCCGAGGTTTGCACCATGGCGGCATG----GTTTCATGGATGGAACTGCACT
TTTTTATTATTATCTGTTATTAGTTAACAACTTAACATTGCTCGTCGATCGCTTGCAGGTTCGACGCCGAGAAACTGCTG
GAGGTGCTCCGGAACCGCCGGCTGGTGTTCGTCGGCGACTCGATCGGGCGCAACCAGTGGGAGTCGATGCTCTGCATGCT
CTCCTCCGCCGTCGCCGACGCCGGGGCCTCGGTGCGCGAGGAGCACGGGAGCCCCATCACCAAGCACAAGGGCTTCCTCT
CCTTCCGGTTCCTTCGCCACAACCTCACGGTGGAGCACTACCGGTCGCCGTACCTGGTCCGGCGCGGCGGCCGCCCCCGC
CGCGCGCCCAGGCACGTCCGCTCCACGCTCCAGCTCCGCGCTATGGACTCCAGGGCGCACCTGTGGAAGGGCGCCGACGT
GCTCGTCTTCAACTCCGGCCACTGGTGGAACCACGACCGGCTCCAGCAGCTGTATGTGTGTTTTATGG-------ATCGC
TTAAAATGGCTGCTCCTCGGG------TTCCATGGCTTGACCTTGCTGTGCCAGGCATTGCTACTTCCAGGAAGGCAAGA
GGCTGAGGCTGGACATGAGCGTGGAGGCGGCCTACCAGAGGGCCATGGACACAGTGCACGAATGGGTCCAGAAGGAGGTG
GACGGCAGCAAGACCCTGGCCGTGTTCAGAACCTACTCGCCGGCGCACAATAGGCACGTCTCCTCTGCTGGT-CTTGTGA
ATTTCAGCCATGATTTGCACAGATAAGTAGC-AATTTGCTTGTTGCTTTGCAGGGGCACAAATGGCGGGAGCTGCGGCAA
GGAGACGCTGCCGGAGCTGAACATGACCGGAATCTCGCTGGGCCGGTGGCCGGGAATGCTGCAGCCGGCGTTTGGGGGAC
CGGAATCGGCCGTGGTGAGGGAC------CTGCGTGTGATGAACGTGACGCTGATGACGGCGCACAGGAGGGACGGCCAC
CCGGCGGTGTACAATGTGGAGCCGTCGGCGAGGATGCTGGTGGGGCAGAGGGAGGACTGCAGCCACTGGTGCCTGCCCGG
TGTGCCCGACGCGTGGAACGAGCTCCTCTACGCCATGGTTCTCGCCAGGCTTTCTTAGACGTTCTCTTGACTGACGTGTA
TGTACATTTACTTCGCATTTGGATTTTTTGTTTCTTTTCAAAAAGGAGTAATTATTCACCTAGAATTTACAAAGTAGTAA
TACATTAATAAGTTTGAAGCTACCATTGGCAACATCC-TTGTTACTCCTATCCACTTGATGAAGGGGTGTATATTGTCGG
GGCTGCATACTCACACCTCACACCAAAGCCCAACATCTAAAGTGGGAGACCTCAGCCAAGCCGAACTGCCGGGTCTGGGT
CACACACTGGTCCAGCGCACTCTCAGTGTGCACCGCATGCGCGCGCTGCAGAGGCCGTCACCACCATATTCCACCAATTC
ATCTTCAGAGCAGGTAGTAATGCATCGACCCTGCCAGACCTGCCGTCGACGCCACCACCTCCCTACACGCGTTCATCATC
ACACATCCTTCACCCAACAGTTTATTGATTTCGAAGAAGGTAGTGTGGATTTTTTGATTTCCTAAAAGAGTTTTGGTTGA
ACATTTTTTTTCTCCGAAGAAGACAAAAAATATAATAAAGAATAAAATATGCTCCAGTGATTATGCTCCATACTGGGTAA
AAATCTCATTGGTGTACACACCGTCGTGAACAACAATTGGTTCTTCGTTCGGTGTAGCGTAGACCATAAACGTGAAAAAA
TAATATCAAAGGAGAAGAGCTTTTGTCACTAAAAACCAAATCATTTCTACATAGGCAAATGGACCATAATAAAGCATACA
CTCTCACTCTTATTAGCATTCTGAATCTATTTGAAGTACCGTCCAACGAGTGATAAAAAATATTGGCAACACTTGTGCGT
GGATAAAGATTGAACGCTATTTGGATGTTTGGCGCG--------------------------------------------
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---------------------------CAAACTTGAACTAGAAAAAGTGGTGCTTGATTGTCTAGTCGTGAGTACAAATG
CTACACTTCTTCTTTCCTTGGCAATTGCAACAATGATGTTATCTTTGGTTAATACAACTTCCCTCCGAAGATACTACACG
GAGATTTTAA
>chr2B_1
GTAGTTGTACTTTCTTATGTTGACGCGTTCAAAGCTCCAGAGCTTGATTATCATCATCA---A-----------------
-------------------------------------------------------------------------TAGCTGA
AATGTGTTGTGCTCGTTCCTACT--------CCCTATGAGGTATTTAGCTCATACAGGTGCGAACATTCTGGTGTGAATG
GATGTAGAGGGACAGTGGTAGCAGGGTTGGGTGAGGAGGTGGAGACCAGCGAGACTAACCTGAGTGATTTTGGACCAA--
-CTTGTTCTTGCTTAAGCTCGAAGAGACGAGGCTACTGCAAACATACCCTATA---------------TAACACCACGAA
ACATGACGATTGGCACTTTGGCAGCGGAATAGTTTTTCAACCAGGAAAGCCAAAGACGGGGCTTGAGCATTTGCACGGCC
TTGCGGCCACACCAGCTCTCTGCTTGGTGCAGGGCGGCCGGCCG----ATGAGAGCGGCCAAACTCCTGGCTATCGATAT
CGTCATATCTAGCACGCGGG----------------------------------------CGCGACCGGCGTGGTGTGAG
GGCCGGGCACGGTGAGGCCGGAGGCGCGGAGATGAGAGGCTCCATCGAGCCGTGCATGCCCTCCCGACTGGGCAGCGGAT
CTAGCTGCCGGCGGGGCTGGCATGTAC----T-----AGTACGAGCATATCTCATCTCTTCTGACATGTGCACACAAATG
GCAGTGACACACAAATCCGAGGTATATATAC--GCAACAGCGCAAATACTTCCAACTGCAACCCACCATCGCTTCTTCGG
GCTCTCCGGAGCCGGAACACACTACGCCAAGTTTCCTCCACTAGCAGCGCGTCGGTTCCTCCACTGAATCCAGGAGCAAC
CGAACAACAAAGCAACCGTTGTTTCTTCCTTCCTCACTTTGTTTCAGGGAGAGCAACCGTTCTCAAAACACAAGAACGGA
CGTGCAGCGGCACCAACAAGAGGAGATTTTTTTTTTCTACGCCAGCAATCGATCAAACCCAAGCGATCGATCCTCTGCAC
TACGTGCTCCTACTGCGTGCCATGCCAAGAAGCAGATACGGCCAAGTCTCGGGCGGCAGCGGGGAGGAGAGCGC------
GTCATGGAGATGGCGAGCGCGAGGAGGCGGGCGAGGCAGCTCAGCGGCGACCACGCCGTGCTCTGGAGCGCCTGCGTCCT
CCTCTCCGCCGCCTCGCTGCTCCTCGCCGCCACCCTCTCCTCGGGCTTCGGCGCCGCCAGGCTC---GCCGGGGAGGTCA
CCGTGGTCGTCAGGGCGCGCGCCGGCGCCGTCGTCGTGACGACAACGGACGGAGACGCCGTCGTCGGCAACGGCCGCCGG
TACTGCGGCGACGTCGATCACGACGGCATGTTAACCGACGGCGAGTGGGTGCGCGAGGAAGCGGGCGTGGCCCCTCTGTA
CGACTCGAGGGACTGCCCGTTCGTCGACGTGGGGTTCCGGTGCCGGGAGAACGGCCGGCCGGACGACGGGTACGCCAGGT
GGAGGTGGCGGCCGACGCGCTGCGAGCTCCCGAGGTTTGCACCATGGCGGCATC----GTGTCGTGGATGGAAATGCACT
CTTTTTGATCTGTTAATTAACAC-----------ACATTGCTCGTCGATCACTTGCAGGTTCGACGCCGAGAAGCTGCTG
GAGGTGCTCCGGAACCGCCGGCTGGTGTTCGTCGGCGACTCGATCGGGCGCAACCAGTGGGAGTCGATGCTCTGCATGCT
CTCCTCTGCCGTCGCCGACGCCGGGTCCTCGGTGCGCGAGGAGCACGGGAGCCCCATCACCAAGCACAAGGGCTTCCTCT
CCTTCCGGTTCCTCCGCCACAACCTCACGGTGGAGCACTACCGGTCGCCGTACCTGGTCCGGCGCGGCGGCCGCCCCCGC
CGCGCGCCTAGGCACGTCCGCTCCACGCTCCAGCTCCGCGCCATGGACTCCAGGGCGCACCTGTGGAAGGGCGCCGACGT
GCTCGTCTTCAACTCCGGCCACTGGTGGAACCACGACCGGCTCCAGCAGCTGTATGCATGTTTAATTTTATGGATATAGC
TTAAAATGCTTG---CTCAGAGTCAGATTCCATGGCTTGACCTTGCTGTGCCAGGCATTGCTACTTCCAGGAAGGCAAGA
GGTTGAGGCTGGACATGAGCGTGGAGGCGGCCTACCAGAGAGCCATGGACACAGTGCACGAATGGGTCCAGAAGGAGGTG
GACGCCGGCAAGACCCTGGCCGTGTTCAGAACCTACTCGCCGGCGCACAATAGGCACGTCTCCTCTGCTGGTGCTTGTGA
ATTTCAGCCATGATTTGCACAGATAAGTAAGTAATTTGCTTGTTAATTTGCAGGGGCTCAAATGGCGGGAGCTGCGGCAA
GGAGACGCTGCCGGAGCTGAACATGACCGGAATCTCGCTGGGCCGGTGGCCGGGAATGCTGCAGCCGGCGTTTGGGGGAC
CCGAATCGGCCGTCGTGATGGGCCTGCATCTGCGTGTGATGAACGTGACACTGATGACCGCGCAGAGGAGGGACGGCCAC
CCGGCGGTGTACAATGTGGAGCCGTCGGCGAGGATGCCGGTGGGGCAGAGGGAGGACTGCAGCCACTGGTGCCTGCCCGG
TGTGCCCGACGCGTGGAACGAGCTCCTCTACGCCATGGTTCTCGCCAGGCTTTCTTAGAGGTTCTCTTGACTGACGTGTA
TGTACATTTACTTCGCATTTGGATTTTTTGTTTCTTTTCGAAAAGGAGTAATTATTCACCTAGAATTTACAAAGTA---A
TACATTCATAAGTTTGAAGCCACCATTGGCAACATCCCTTGTTACTCCTATCCACTGGATGAAAGGGTGCATATTGTCGG
GGCTGCATACTCACACCTCACACCAAAGCCCAACATCTAAAGTGGGAGACCTAAACCAAGGCGAACTGCCGGGTCTGAGT
CACACACTGGTCCAGCGCACTCTCAGTATGCACCGCATGCGCGCGCTGCAGAGGCCGTCGCCACAGTATTCCACCAATTC
ATCTTCAAAGCAAGTACTAATGCATCGACCTTGCCAGACCTGCCGTCGACGCCACCACCTGCCTACACGCGTTCATCATC
ACACATCCTTCACCCAACAGTTTATTGATTTCGAAGAAGGTAGTGTGGAGTTTTTGATTTCCTAAAAGAGTTTTGGTTGA
ACATTTTTTT-CTCGGAAGAAGACAAAATATAAAATAAAGAATAAAATATGCTCCAGTGATTATGCTCCATACCTGGTAA
AAATCTCATTGGTGTACACACTGTCGTGAACAACAATTGGTTCTTCGTTCCGTGTAGCATAAACCATAAACGTGAAAAAA
TAATATCAAAGAATAAGAGCTTTTGTCACTAAAAACTAAATCATTTCTACATAGGCAAATGGACCATAATAAGGCATACA
CTCTCACTCTTATTAGCATTGTGAATCTATTTGAAGTACCGTCCAACAAGTGATAAAAAATATTGGCAACACTTGTGCGT
GGATAAAGATTGAACGCTATTTAGATGTCCGGCGCACAAACTTGAGAGTATTTGTCAAAAAACTACCACATTAGGGATTT
CCGTCCCTCTGAACTACCACATTCAAAAAAGTGACTGATAACTACCAAAATTTTCTAATTTTGTGACTGAAAACTACCAC
TTTTGAAAAATGGCCCGTTTAAACGATTTAAACGCCATTATGACAAATGGGACCCACCCATCAGGCTGACGTGGCAGCCC
AGTCAACTCCGTTTATTTTGACCGTCAAGTTGACTGTTATGACAGGTGGGGCCCACATGTCATCATCAACCTTCCTCCTT
GTGTGTCTCTCTTGGGCATTTCAACAAGCATCTTCTGTGCATCTAAGGGAAAGAGGCGATGGCAAGGGGAAGAGCGACCT
CCAGCACGACGCTCACCACGACCAACTGCACGGCCGCCTCCTTCCAGCTCGCCGCTGCGGTCACGACCGCCACGCGCGCT
GGAGATGAGCGGCCGCGCCGCCAACGCCGCCGTCGGCTTCCTCTGCGGCGATGATGACCAGGAAGACCAGGCGGAAGAGG
AGCGTGGCGAGGAAGACGAACAGCACGACGCCATGCACGAACGACTCCACGCCGCCGGTGTCAGAGTGACTCCAGCTGTA
CTTGTACCAGGAGTTGAGATAATACGCCGGGACGGCCGTGGACGCAGGCTCCGCGGCGGCGACCAGCGTGGCGCAGGCGA
AGAGGGCACGGGGCCGGGGCGTGCCGCGGACGAGCTCCGAGAGTGAGCGCGGCCGGTCGCCGCGGAGCGTGGCGCAGGCG
GCCTGCGTCGCGAGCTTGCTAGCGAGTACATTAGGTGGAGGACGAGTAGCGCCGCTGGGTGCAGCCACGCCCGCGTACAC
CTCGACGACACTGCTCCAGAGCACCACCCGCACCACCAAGTCGGCCGGTGACGTGGGGGATAACCTGGCGCTCGTGCTCA
GCTCCACCGACGCGGGATGTACCTGGCTTCCTCACCTGCTCCTCCAAATCGACATAAGAGCAGCTGGATGAGCTTGCTCG
CGTACGTGGTCGGGCTAGAGCTCACCTGCTCTCCTCCCATGCACATAAAATGCTTGTTGAAATGCCAAAGAGAGAGGAGG
AAGAGGAAGGTTGATGTGGGCCCTACCTGTCATAACGGTTAACCTGACGGTCAAAACAAACGTAGTTGACTTCGCCGCCA
TGTCAGCCTTGACGGGTGGGTCCCGCCTGTCATAAACACATTTAAATCGTCTAAATTGGTCATTTTTCAAAAATGGTAGT
TTTTAGTCACAAAATTAGAAAATTTTGGTAGTTATCAGTCACTTTTTTGAATGTGGTAGTTCAGTGGAACGGGAACCCCT
AATGTGGTAGTTTTTTGTCAAATACTCCAAACTTGAACTGGAAAAAGTGGTGCTTGATTGTCCAGTCGTGAGTACAAATG
CTACACTTCTTCTTTCCTTGCCAATTGCAACAATGATATTATCTTTGGTTAATACAACTCCCCTCCGAAGATACTACACG
GAGATTTTAA
>chr2A_1
GTAGCTGTACTTTCTTATATTGACGCATTC-AAGCTCCAGAGCTTGATTATCATCAATGCTCCCTCTGTTCACTTTTATA
AGACGTTTTAGATAGTTCAGACAGCTTGCAAAACAGTTCAAAATCAGCTGTCTAAAACGTCAAATGGAGGGAGTAGCCAA
AAAGTGTTGTACTCGCTCCTACT--------CCCGATGAGGTATTTAGCTCATAGAGGTGCGAACATTGTGGTGCGAATG
GATGTAGAGGGACAGTGATAGCAGGGTTGGGTGAGGAAGTGGAGACTAGCGAGACGAACCTGAGTGATTTTGGACCAA--
-CTTGTTCATGCTTAAACAC---GAGACGAGGCTAC---------------TA---------------TAACACGACGAA
ACATGATGATTGGCACTTTGGCAGTCGAATAGTTTTTCAATCAGG-AAGCCAAAGACACGGCTTGAGCATGTGCACGGCT
TTGCGGCCACACCAGCTCTCTGCCTGGTGCAGGGT----GGCCGGCAGATGAGAGCGGCCAGACTCCTGGCGATCGATAT
CGTCATATCTAGCACGCGGCGCCCGTCACCAGCCCCCTTGCCTTCTCCGGGCGAAGGCATCGCGACCGGCGTGGTGTGAG
GGCCGGGCACGGCGAGGCCG---------------GAGGCTCCAT-----CGTGCATGCGCTCCCGACCGGGCAGCGGAG
CTAGCTGCCGGCGTGGCTGGCATGTACTCCGT-----AGTACGAGCATATCTCATCTCTTCTGACATGTGCTCACAAATG
GCAGTGTCACACAAACCCCAGGTATATATAC--GCCACGGCGCAAATACTTCCAACGGCACCCCGCCATCGCTTCTTCGG
GCTCTCCGCAACCGGAACGCACTCCGCCAAGTTTCCTCCACTACCA--GCGTCGGTTCCTCCACTGAATCCAGGAGCAAC
CGAACAACAAAGCAGCCGTTCTCTCTTCCTTCCTCGCTTTGTTTCAGGGAAAGCAACCGTTCTCAAAACACAAGAAA---
-------------CAACAAGAGCAGATTTTCC------ACGCCAGCAAGCGATCAAACCCAAGCGATCGATCCTCTACAC
TACGTGCCACTACTACGTGACATGCCACGCAGAC---ACGGCCAAGTCTCGAGCGGCAGCGGGGAGGAGAGCGCGCCATG
GTCATGGAGATGGCGAGCGCGAGGAGGCGGGCGAGGCAGCTCAGCGGCGACCACGCCGTGCTCTGGAGCGCCTGCGTCCT
CCTCTCCGCCGCCTCGCTGCTCCTCGCCGCCACCCTCTCCTCGGGCTTCGGGGCCGCCAGGCTCTCCGCCGGAGAGGTCA
GCGTGGTCGTGCGGGCGAGCACCGGCGCTGTCGTCGTGACG---ACGGACGGAGACGCTGCCGTCGACAACGGCCGCGGG
CACTGCGGCGACGCTGATCACGACGGCATGCTAACCGACGGCGAGTGGGTGCGCGAGGAAGCGGGCGTGGCCCCTCTCTA
CGACTCGAGGGAGTGCCCGTTCGTCGACGTGGGGTTCCGGTGCCGGGAGAACGGCCGGCCGGACGACGGGTACGCCCGGT
GGAGGTGGCGGCCGAGGCACTGCGAGCTCCCGAGGTCTGCACCATGGCGGCATGCATGGTGTCATGGACGGAACTGCACT
CTGTTTGATCTGTTAATTAACAC-----------ACATTGCTCGTCGATCACTTGCAGGTTCGACGCCGAGAAGCTGCTG
GAGGTGCTCCGGAACCGCCGGCTGGTGTTCGTCGGTGACTCCATCGGGCGCAACCAGTGGGAGTCGATGCTCTGCATGCT
CTCCTCGGCCGTCGCCGACGCCGGGGCCTCGGTGCGCGAGGAGCACGGGAGCCCCATCACCAAGCACAAGGGCTTCCTCT
CCTTCCGGTTCCTCCGCCACAACCTCACGGTGGAGCACTACCGGTCGCCGTACCTGGTCCGGCGCGGCGGCCGCCCCCGC
CGCGCGCCCAGGCACGTCCGCTCCACGCTCCAGCTCCGCGCCATGGACTCCAGGGCGCACCTGTGGAAGGGCGCCGACGT
GCTCGTCTTCAACTCCGGCCACTGGTGGAACCACGACCGGCTCCAGCAGCTGTATGCATGTTTAATTTTATGGATATAAC
TTGAAATGTTTG---CTCGGG------TTCCATGGCTTGACCTTGCTGTGCCAGGCATTGCTACTTCCAGGAAGGCAAGA
GGCTGAGGCTGGACATGAGCGTGGAGGCGGCCTACCAGAGGGCCATGGACACAGTGCACGAATGGGTCCAGAAGGAGGTG
GACGCCGGCAAGACCCTGGCCGTGTTCAGAACCTACTCGCCGGCGCACAATAGGCACGTCTCCTCTGCTGGT-CTTGTGA
ATTTCAGCCATGATTTGCACTGATAAGTAGC-AATTTGCTTGTTGCTTTGCAGGGGCACAAATGGCGGGCGCTGCGGCAA
GGAGACGCTGCCGGAGCTGAACATGACCCGAATCTCGCTGGGCCGGTGGCCGGGAATGCTGCAGCCGGCGTTTGGGGGAC
CGGAATCGGCCGTCGTCAGGGACCTGCGTCTGCGTGTGATGAACGTGACGCAGATGACGGCGCACAGGAGGGACGGCCAC
CCGGCGGTGTACAATGTGGAGCCGTCGGCGAGGATGCCGGTGGGGCAGAGGGAGGACTGCAGCCACTGGTGCCTGCCGGG
TGTGCCCGACGCGTGGAACGAGCTCCTCTACGCCATGGTTCTCGCCAGGCTTTCTTAGACGTTCTCTTGACTGACGTGTA
CGTACATCTACTTCGCATTTGGATTTTTTGTTTCTTTCCGAAAAGGAGTAATTATTCACCTACAATTTACAAAGTA---A
TACATTAATAAATTTGAAGCCACCATTGGCAACATCTGTTGTTACTCCTATCCACTTGATGAAGGAGTGCATATTATCGG
GGCTGCATACTCACACCTTACACCAAAGCCCAACATCTAAAGTGGGAGACCTCAACCAAGCCGAACTGCCGGGTCTGGGT
CACACACTGGTCCAGCGTATTTTCAGTGTGCACCGTATATGCGCGCTGCAGAGGCCGTCGCAACAGTGGTCCACCAATTC
ATCTTTAGAGCAGGTACTAATGCATCGACGTAGCCAGACCTGCCGTCGACGCCACCACCTCCCTACATGCGTTCATCATC
ACACATCCTTCGCCCAACAGTTTATTGATTTCGAAGAAGGTAGTGTGGATTTTTTGATTTCCTAAAAGAGTTTTGGTTGA
ACATTTTTTTTCTCGAAAGAAGACAAAAAATAAAATAAAGAATAAAATATGCTCCAGTGATTATGCTCCATACTGGGTAA
AAATCTCATTGGTTTACACACCGTCGTGAACAACAATTGGTTCTTCGTTCGGTGTAGCGTAGACCATAAATGTGAAAAAA
TAATATCAAAAGAGAAGAGCTTTTGTCACTAAAAACCAAATCATTTCTACATAGGCAAATTGACCATAATAAGGCATACA
CTCTCACTCTTATTAGCATTC-GAATCTATTTGAAGTACCGTCCAACGAGTGATAAAAAATATTGGCAACACTTGTGCAT
GGATAAAGATTGAACGCTATTTGGATGTCTGGCGCG--------------------------------------------
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---------------------------CAAACTTGAACCGGAAAAAGTGGTGCTTGATTGTCTAGTCGTGAGTACAAATG
CTACACTTCTTCTTTCCTTGCCAATTGCAACAATGATGTTATCTTTGGTTAATACAACTCCCCTCCGAAGATACTACACA
GAGATTTTAA
>SNPs
-----------------------------------------------------------SSS------------------
--------------------------------------------------------------------------------
-----S--S------------S-SSSSSSSS-------------------------------------------------
-------S-----------------S---------------S------------------------------------SS
S----------------------------------------------------SSSSSSSSSSSSSSS------------
-------------------------------S------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------SSSSS---S------------S--------------------------
-------------------------------SS-----------------------S-----------------------
---------------SS-----S-S--------S----------------------------------------------
-----------------------------------------------S----------------------------S---
-------------S---S--------------------------------------------------------------
------------S--------------------------------------------------------------S----
--------------------------------------------------------------------------------
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----------------S------------------S------------------------------------S-------
---------S----------------------------------------------------------------S-----
------------------S-------------------S-----------------------------------------
----------S-------------------------------------------------S-------------------
S----SSSSS-S-SSS---SS-SSSSSSSSSSSS----------------S----------------------S------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------SS-----S--SS---------S--
--------SS--SSS-----------------------------------------------------------------
--------------------------------------------------------------------------------
----S-S-------------------------------------------------------------------------
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-------------S------------------------------------------------------------------
-------------------------------------S------------------------------------------
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---------------------------------------S------------------------------------SSS-
--------------------S------------------------------------------------S----------
------------------------------------------------------S-------------------------
-----------------------------------------------------------S----SS--------------
----------------S-------------S-------------------------------------------------
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--------------S-----------------S-----------------------------------------------
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------------------------------------------------------------------------S-------
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----------------------------S---------------------------------------------------
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---------------------------------------S----------------------------------------
--------------------S--------------------------------------S--------------------
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>forward_282
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----------------------AGGTTTGGGTGAGGAAGTGC--------------------------------------
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>reverse_1515
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--------------------------------------------------------------------------CCTGTA
CGACTCGAGGGAGT------------------------------------------------------------------
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>forward_857
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-------------------------------------CGGCGCAAATACTTCCAACC-----------------------
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>reverse_1714
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---------------------------------AACATTGCTCGTCGATCGCT---------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TCATGGATGGAACTGCACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3137
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GTAATGCATCGACCCTGCCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
