>input_sequence_48453
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----------------------------------------------------CCAATCCCAGAGATAACGAAGATGAGGA
ACCAGAAGAGCCGTGTCCAGGAGTGCAAGGTCGAGCACGTCGACCTCATCCCGGGCATGCCGGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTCTGCCGCGGCTGGAACACCGCCGCCGCCGCGCC
GGACTTCGCGCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGACCTGGTCTACCTGCTGCAGTTCGGGAACCCGGCGGCCG
CGGACGCGGATGGGGCCGCGCCGGAGAACGCCCAGGCGTACGGCGTGTCGGTGTACAACGTCACCACCGGCGAGTGGCGC
CGGGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCCTCGCCGTGCTGGGCGGGTG
GGACCCCGAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCCTCCACCGGCGTGTGGCGCCGCGGCGCGCCCA
TGCGGTCGGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGCGGCAAGATCTACGTCGCGGGAGGCCACGACAAGCTCAAG
AACGCGCTGAAGACGGCGGAGGCGTACGACGCGGGCGCCGACGCCTGGGACCCGCTCCCGGACATGTCCGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCTGTGAGCGGGTACCGCACGGGCCGCCAGGGCGGGT
TCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCCGGCTGGAGCGCGTGCGCGCGCCGCCGTCGGCG
GCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTACCGCGGGGAGCGGCGCAGCTG
GCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACTGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGG
TGGTGACCGGCGCCATCGAGTCCGAGGGCGGAGGCACCGGGCACGCGCTGTGGGTGTTCGACGTCAAGTCCAAGAGCTGG
ACCGTGGTGCGCCCACCGCCGCAGTTCGCTGGCTTCGTCTTCTCCATTGGATCCGTGCGCGTGTGATGTCTCGGACCGCT
CTCCTGTCCAAGGAGACTTCTTGGTAGCCATGTCATGTGTGCGAGAGATGAGCGGAAGGC-----------AGAGATGCT
AGTAGTCGACGGCATGTCGGCATAGAAGGCGAAGAGAGGTAGTGTAGTTAGCTCAGCTGTGTTCATCTGCCTCTGTTGCA
GTTGCAGAACTGAATTCCTGGTCGTATGGTTGAACTGATGGATCAAGGGTGTAGTAATCCTTGTTTT-CGAATCTATAGA
GGTTGGATTACCTGATGGTTCTTGGCAAGCAACATTTATCCGTCTCCTCCAGTCAAAAATACTTACGTTGGGAACAGGTA
AAAACAGGCAAACACTGTGGGTTCGGGGATACAT---CTCA---TGAGAGTAACAACCAAATATGCCTTTGA----GAAA
CACGAAAATATAAAGCGAAACGGATTCT----------------------------------------------------
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>chr4A_1_TraesCS4A01G228800
CCACGACGACCATAACGGTAGCCCTCCGTGCGCGTAGCTTCCCTCTCTGCCAAGGCGGTCGTCGTCATGCAGAAAAGGTA
GTAATAGGTGGCTGGGAGGCGCTTCGGCCCAACGGCTGATTCAGCCTTGTGGGGCGCCTCCTTCTCAACCCACTCAAACC
GTTTCCACATCCTCTCCCGAAACTTTCTCCTGGCGTGATCTTCTTTAGTCTCGCTGGGAAAAGCCTTGCG-GAAAGGCTC
GCCCGCTGTGACATGACCGATGTGGGGTGAGTGTGGCGGCGATGGGGAAGATGAGGGAGAAGTGACGCCCGCGAAAAGAG
GAGATGTGTGAGAGGTGGCACCGCTAAGCAAGAGTGGACCGATTTATGCCCGGAATGGCCGCGTTCCAGCGGTAAACGTG
GCTGAATTTGGCGTATTTGCATGAATTCCGTGCTTTTGTTGGACCTGCTTTTGGAATCTCAAATGCCAACCGGAAGGTTA
TTACGGGAATTCAGTACTTATGGAGATTTGCCAGAATTACTCTAATAGCAAAAATTAAATGACAAAAAAAATAAATCAAA
AGTACACACGCTTGGGAGACCCAAGACTACTCCCTCTCCCATCTGCTACACCGGCGTAGATGGAAAATGGAGGACGCAGG
CGCGTGGTCTAGGGTTTCGCTCGGCTGTTGCTTTGCGAAATACTTATAAAGATGCTTCGAATTTTATATGAAAAT-GCGT
TACGAACAAAATGCGTATTTAAAACAAAAGGTTCGATCGTAGCAAAGAATCAAGCAAGCGAAGAAGCCACGACAGAGATC
GGTCGCA-GTCGGTGCTGTCGTCGGTGCGCGGTGAACTGCATTTCGACTGGCGCCAGTGCACTGAATTTTCTTTTCTTCA
ATAAAC--CTTTCGATGTGTCCTCAGCTCCAATCACGCCGCGCCACGTGCCACCCCCAGCGCTCTATTTAATGCCACCCT
TCCGCCGAGCCGGAGAGCCATCCATCTCCATTCCCAACCCCG-------ATCCCAATCCCAGAGATAACGAAGATGAGGA
ACCAGAAGAGCCGTGTCCAGGAGTGCAAGGTCGAGCACGTCGACCTCATCCCGGGCATGCCGGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTCTGCCGCGGCTGGAACACCGCCGCCGCCGCGCC
GGACTTCGCGCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGACCTGGTCTACCTGCTGCAGTTCGGGAACCCGGCGGCCG
CGGACGCGGATGGGGCCGCGCCGGAGAACGCCCAGGCGTACGGCGTGTCGGTGTACAACGTCACCACCGGCGAGTGGCGC
CGGGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCCTCGCCGTGCTGGGCGGGTG
GGACCCCGAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCCTCCACCGGCGTGTGGCGCCGCGGCGCGCCCA
TGCGGTCGGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGCGGCAAGATCTACGTCGCGGGAGGCCACGACAAGCTCAAG
AACGCGCTGAAGACGGCGGAGGCGTACGACGCGGGCGCCGACGCCTGGGACCCGCTCCCGGACATGTCCGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCTGTGAGCGGGTACCGCACGGGCCGCCAGGGCGGGT
TCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCCGGCTGGAGCGCGTGCGCGCGCCGCCGTCGGCG
GCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTACCGCGGGGAGCGGCGCAGCTG
GCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACTGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGG
TGGTGACCGGCGCCATCGAGTCCGAGGGCGGAGGCACCGGGCACGCGCTGTGGGTGTTCGACGTCAAGTCCAAGAGCTGG
ACCGTGGTGCGCCCACCGCCGCAGTTCGCTGGCTTCGTCTTCTCCATTGGATCCGTGCGCGTGTGATGTCTCGGACCGCT
CTCCTGTCCAAGGAGACTTCTTGGTAGCCATGTCATGTGTGCGAGAGATGAGCGGAAGGC-----------AGAGATGCT
AGTAGTCGACGGCATGTCGGCATAGAAGGCGAAGAGAGGTAGTGTAGTTAGCTCAGCTGTGTTCATCTGCCTCTGTTGCA
GTTGCAGAACTGAATTCCTGGTCGTATGGTTGAACTGATGGATCAAGGGTGTAGTAATCCTTGTTTT-CGAATCTATAGA
GGTTGGATTACCTGATGGTTCTTGGCAAGCAACATTTATCCGTCTCCTCCAGTCAAAAATACTTACGTTGGGAACAGGTA
AAAACAGGCAAACACTGTGGGTTCGGGGATACAT---CTCA---TGAGAGTAACAACCAAATATGCCTTTGA----GAAA
CACGAAAATATAAAGCGAAACGGATTCTTGAGCGTTAGC--------------TTGCCTTCCTCGACTCTGTTCTTAGCA
TTTCACAATGCAGT-AAGTGTAACTTGAAGAACACGCAGTGGGCGCCCCTCACCGTGGATCCTCCTAGTAAATCCTCCGT
GGCTTTTGTTTCTCCCTGTGGACGATCTTTAACGGTGTCCGGTTGGTTTAATGGAATGTCAAGCGCAGCTACGAAAAGAG
GGCAAAGGCGATCGTGAAAACCTAGCCGCCTCTCTTTCTCGCCGTTGTCCGAGGGAGGTTCGATTCAGGGGTGGCTTGCT
GGTAACTGCTGGAGGGTTGCCGCGGTCAGAGAAGAAGACAAGGGCTTAAAGAGCATCTTCAACAGGC--GCAAAATAATT
TTTACACCGTTGAAATAGTATTTTTTTTATGTGCAGCAGAGCGCTGGCTCCGGCTGCCACTGTAAAAAATGGCGCGCGTG
AGCAGCTTCATCAGACGCTGCAAAAAACGGCGCGCG--CCAGCAACCGATACTACCATGCAACACATGCGAATAG-----
--------------CATATAGATAAAATTCAAA---------TAACATAG-TTCAAGCCCAGTACCACAAACTAGTACAT
ACGGTACA---AATAAAAATAGATAAAAACGATACTTATGATGCAAATATACTAGAAACTACTCATTA---T---CGTCC
TCCCCCTCGGTGGTGTAGTCCGATGATAGGAACGTGTCATCCCACCGAGGATCATTGTCGTCAAAGGTCGACGCCAATCC
CAGTTCGCACTAAGCTATCGCCAATGCCTTCCACGC--ACGCCTGTCTGCCCGTTCAACGGCTCGCAGTG----------
----CAGAAGTCGTTCTCGGCGGCGACATCCTCCGGGAAACGTTGGTGCCACTCCGCCATGGCGTCCTTGTCCACCTCGG
CATGAC-GAGGCGGCGCTC-------CCGCCTACGCTGGATGCGGCGGTCCTTGTCGGTGATTAGCAGCGGCGGAGGCGC
GAGGTCCTGCACCTGCTGGTGCGTCCGAGCATCCGAGAAATTCATCTGCGAACGTGGCCGGTTGAGGTG
>chr4D_2
-CACGAGGGACATAACGGTAG-CCTCCGTGAGCGTACCATCCCTCTCTACCAAGGCGATTGTCGTCATGCAGAAAAGGTA
GTGATGGGCGGCTGGGAGGCGCTTCGGCCCAACGGCTGATTCAGCCTTGTGGGGTGTGTCCTTCTCGACCCACTCAGACC
ATTTCCACATCCTCTCCTAAAACTTTCTCTTGGCGCGGTCTTCTTTAGTCTCGCCGGGAAAAGCTTCACGTGAAAGGCTC
AGTCAAC-------------------------------------GGGAGGATGAGGGAGGAGTGACGCCGGCAAAAGGAG
GAGATGGGTGAGGAGTGGCACTGCTTAGCAAGAGTGGGCTGATTTATACCCGGAATGGCCGCACTCCAGCGGCAAACGTG
GCCGGATTTGGCGTGTTTGTGTGAATTCCGTAC-TTTGCTGGACCTGTTTTTCGAATCTCGAATTCCAACCCGAAGGTTA
ATATTAGAATTCGGTACTTATTGAGACTTGCCAGAATTACTCTAATAGCAAAAATTTAATGAAAAAA---------CAGA
AGTACACACGCTTGGGAGATCCAAGATTACTCCCTCTCCCATCTGCTACACCGGCGTAGATGGAAACACAGGA-------
---------------------CGGCTGTTGCTTTGCGAAA----TATAAAGATGCTTCGAATTTTATATGAATGCGTTG-
--CGAATGAAATGTATTTTTAAAACAAAAGGCTGGATCGTAGC-AAGAATCAAACAAGCGAAGAAGCCACGACAGAGATC
GGGCTGTCGTCGGTGCTGTCGTCGGTGCGCGGTGAACTGCATTTCGACTGGCGCCAGTGCTCTGAATTTTCATCTCTTCA
ATATACAGCTTTCGATGTGTCCTCAGCTCCATTCACGCTGCGCCACGTGCC-CTCTCAGCGCTCTATTT-ATGCCACCCT
TCCACCGAGCCAGAGAGCCATCCATCTCCATTCCCAACCCCAA-------TCCCAATCCCAGAGATAACGAAGATGAGGA
ACCAGAAGAGCCGTGTCCAGGAGTGCAAGGTCGAGCACATCGACCTCATCCCGGGGATGCCGGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTCTGCCGCGGCTGGAACACCGCCGCCGCCGCGCC
GGACTTCGCCCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGACCTGGTGTACCTGCTGCAGTTCGGGAACCCGGCGGCCG
CGGATGCGGACGGGGTCGCGCCGGAGAACGCCCAGGCGTACGGCGTGTCGGTGTACAACGTCACCACCGGGGAGTGGCGC
CGCGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCCTCGCCGTGCTGGGCGGGTG
GGACCCCAAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCGTCCACCGGCGTGTGGCGCCGCGGCGCGCCGA
TGCGGTCGGCGCGGTCCTTCTTTGCCTGCGCCGAGGCGGGCGGCAAGATCTACGTCGCGGGAGGCCACGACAAGCTCAAG
AACGCGCTCAAGACGGCGGAGGCGTACGACGCCGGCGCCGACGCCTGGGACCCGCTCCCGGACATGTCGGAGGAGCGCGA
CGAGTGCGATGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCGGGTACCGCACGGGCCGCCAGGGCGGCT
TCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCCGCCTGGAGCGCGTGCGCGCGCCGCCGTCCGCG
GCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTACCGCGGGGAGCGGCGCAGCTG
GCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACGGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGG
TGGTGACCGGCGCCATCGAGTCCGAGGGAGGGGGCACCGGGCACGCGCTGTGGGTGTTCGACGTCAAGTCCAAGAACTGG
ACCGTGGTGCGCCCGCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCATTGGATCCGTGCGCGTGTGATGTCTCGGACCGCT
CTCCTGTCCAAGGAGACTTCTTGCTAGCCATGTCATGTGTGCGAGAGACGAGCGGAAGGC-----------AGA--TGCG
AGTAGTCGACGGCATC--------GAAGGCGAAGGA--GTAGTGTAGTTAGCTCAGCTGTGTTCATCTGCCTCTGTTG--
----CAGAACTGAATTCCTGCTCGTATGGTTGGACTGATGGATCAGGGGTGTAGTAATCCTTGTTTTTCGAATCTATAGA
GGTTGGATTACCTGATTGTTCTTGGCAAACAACATTTATCCGCCTTCTTCAGTCAAAAATACGTC----GGGAACAGGTA
AAAACAGGCAAACTTTCTGGGTTCGTGGAGACATCTCATGAGACTGAGAGTAACAACCAAATGTGCGATATAAAGCGAAA
CACGGAGACATAAAGCGAAACGAAGGGTTTAGCACGGATTCATGAGAGTCAGTTTGCCTTGCTCGACTCTGTTCTTAGCA
TTTCACAATGCAGTCAAGTGTAACTTGAAGTACACGCAGTGGGCGCCCCTCACCGTGGATCCTCCTAGTAAATCCTCCGT
GGCTTT-GTTTCTCCCTGTGGACGATCTTTAACGGTGTCCGGTTGGTTTAA-----------------------------
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>chr4B_588
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----------------------------ACTCCCTCTCGCATCTGCTACAACGGCGTAGATGGAAAATGGAGGACGCTGG
CGCGTGGTCCAGGGTTTTGCTCGGCTGTTGCTTTGCGAAATACTTATAAAGATGCTTCGAATTTTGTATGAAAATTGCGT
TACGAACGAAATGTGTATTTAAAACAAAAGGTTCGATCGTAGGG-AGAATCAAACAAGCGAACGAGCCACGACAGAGATC
GGTCGCA-GTCGGTGCTGTCGTCGGTGCGCGGTGAACTGCATTTCGACTGGCGCCAGTGCACTGATTTTTCTTCTCTTCA
AAATACAGCTTTCGATGTGTCCTCTGCTCCAGTCACGCCGCGCCACGTGCC-CCCTCAGCGCTCTATTT-ATGCCACCCA
TCGACCGAGCCAGAGAGCCATCCATCTCCATTCCCAACCCCAATCCCAAATCCCAATCCCAGAGATAACGAAGATGAGGA
ACCAGAAGAGCCGTGTTCAGGAGTGCAAGGTCGAGCACATCGACCTCATCCCGGGCATGCCGGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTGTGCCGCGGCTGGAACAGCGCCGCCACCGCGCC
GGACTTCGCGCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGATCTCGTCTACCTGCTGCAGTTCGGGAACCCGGCGGCCG
CGGACGCGGACGGGGTCGCGCCGGAGAACGCCCAGGCGTACGGGGTGTCGGTGTACAACGTCACCACCGGGGAGTGGCGC
CGCGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCCTCGCCGTGCTGGGCGGGTG
GGACCCCAAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCGTCCACCGGCGTGTGGCGCCGCGGCGCACCGA
TGCGGTCGGCGCGGTCCTTCTTCGCCTGCGCCGAGGCGGGCGGCAAGATCTACGTCGCGGGAGGCCACGACAAGCTCAAG
AACGCGCTGAAGACGGCGGAGGCGTACGACGCGGGCGCCGACGCCTGGGACCCGCTGCCGGACATGTCGGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCTGGCGACCGGTTCCTGGCCGTGAGCGGGTACCGCACAGGCCGCCAGGGCGGGT
TCGAACGCGACGCCGAGTGGTTCGACCCAGCGTCCCGCGAGTGGCGCCGCCTGGAGCGCGTGCGCGCGCCTCCGTCGGCG
GCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTACCGCGGGGAGCGGCGCAGCTG
GCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACGGCGCGCGCGGTCGCCGTCGGAGGCGGCGAGCGCGTGG
TGGTGACCGGCGCCATCGAGTCCGAGGGAGGAGGCACGGGGCACGCGCTGTGGGTGTTCGACGTCAAGTCCAAGAACTGG
ACCGTGGTGCGGCCGCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCATTGGATCCGTGCGCGTGTGATGTCTCGGACCGCT
CTCCTGCCCAAGGAGACTTCTTGCTAGTCATGTCATGTGTGCGAGAGATGAGCGGAAGGGGGAAGGCACAGAGA--TGTG
AGTAGTCGACGGCATC--------GAAGGCGAAGAGAGGTAGTGTAGTTAGCTCAGCTGTGTTCATCTGCCTCTGTTG--
----CAGAACTGAATTCCTGCTCGTATGGTTGGACTGATGGATCAGGGGTGTAGTAATCCTTGTTTTCCGAATCTATAGA
GGTTGGATTACCTGATTGTTCTTGGCAAGCAACATTTATCCGCCTTCTTCAGTCAAAAATACTACGTCCCC-AACATGTA
AAAACAGGCGAACACTCTATGGATGCTAGTACATCTCCTCA---TGAGAGTAACAACCAAATGTGC--------------
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>chr4A_1019
AAGAAT--------------------------------------------------------------------------
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---------------------------------------------------------------------------GATGA
ACCCAAAGAGCCGTGTCCAAGAGTGGGAGGCCGACCACGTCGAGCTCATCCCGGGGATGCCCGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGGGTCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGCGGAGCGCCGCCGCCGCCCC
GGAGTTCGCCCTGGCGCGCGCCGAGGCCGGAGCCAACGAGGATCTGGTCTTTCTCATGCAGTTTGGCAACCCGGTGGCCG
GGGACGACGGG------GCGCCCGAGAACGCCCCGGCGTACGGCGTGGCCGTGTACAACGTCACCACCGGGGAGTGGCAC
CGCGAGAGCTCCGCCCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCGTCGCCGTGATGGGCGGCTG
GGACCCCAAGACCTTCGAGCCCGTGGCGGACGTCAATGTGCTGGACGCCGCCACCGGCGTCTGGCGCCGCGGCGCGCCGA
TGCGGTCCGCGCGCTCCTTCTTCGCCTGCGCCGAGGCGGGCGGCAAGATCTATGTCGCCGGCGGGCACGACAAGCTCAAG
AACGCGCTCAAGACGGCGGAGGCGTACGACGCTGAGGCCGACGGCTGGGACCCGCTGCCGGACATGTCGGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTCGCCGTGAGCGGGTACCGCACGGGGCGCCAGGGAGGGT
TCGAGCGGGACGCCGAGTGGTTCGATCCGGCGACCCGCGAGTGGCGCCGCCTGGAGCGCGTGCGCGCCCCGCCGACGGCG
GCTCACGTGGTGGTGCGCGGCCGCGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTGGCGCGGGGAGCGCCGGGGCTG
GCTCGAGGTGGGCCCCTACCCGCCTGGTCTCAAGGCCGGCACGGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGG
TGGTCACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGCTGTGGGTATTCGACGTCAAGTCCAAGAACTGG
ACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTGGCCTCCGTCCGCGTGTGATG------------
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>chr4D_1019
AAGAAT--------------------------------------------------------------------------
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---------------------------------------------------------------------------GATGA
ACCCAAAGAGCCGTGTCCAAGAGTGGGTGGCCGACCACATCGAGCTCATCCCGGGGATGCCCGACGACGTCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGGGTCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGCGGAGCGCCGCCGCCGCCCC
GGAGTTCGCCCTGGCGCGCGCCGAGGCCGGTGCCAACGAGGATCTGGTCTTTCTCATGCAGTTTGGCAACCCGGTGGCCG
GGGACGACGGG------GCGCCCGAGAACACCCCGGCGTACGGCGTGGCCGTGTACAACGTCACCACCGGGGAGTGGCAC
CGCGAGAGCTCGGCGCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCGTCGCCGTGATGGGCGGCTG
GGACCCCAAGACCTTCGAGCCCGTGGCGGACGTCAACGTGCTGGACGCCGCCACCGGCGTCTGGCGCCGCGGCGCGCCGA
TGCGGTCCGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGGGGCAAGATCTATGTCGCCGGCGGCCATGACAAGCTCAAG
AACGCGCTAAAGACGGCCGAGGCGTACGACGCGGAGGCCGACGGCTGGGACCCGCTCCCGGACATGTCGGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCGGGTACCGCACGGGGCGTCAGGGAGGAT
TCGAGCGGGACGCCGAGTGGTTCGACCCGGCGACACGCGAGTGGCGCCGCTTGGAGCGCGTGCGCGCACCGCCTTCGGCG
GCTCACGTGGTGGTGCGCGGGCGGGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTGGCGCGGGGAGCGCCGTGGCTG
GCTCGAGGTGGGCCCTTACCCGCCTGGTCTGAAGGCCGGCACGGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGG
TGGTGACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGCTGTGGGTGTTCGACGTCAAGTCCAAGAACTGG
ACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTGGCCTCCGTCCGCGTGTGATG------------
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>chr4B_1019
AAGAAT--------------------------------------------------------------------------
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---------------------------------------------------------------------------GATGA
ACCCAAAGAGCCGTGTCCAAGAGTGGGAGGCCGAGCACATCGACCTCATCCCGGGGATGCCCGACGACATCGCCGTCGAC
TGCCTGGCGCGCGTCCCGCACGGATCCTACCGTTCGATGCGCCGCGTGTGCCGCGGCTGGAGGAGCGCCGCCGCCGCCCC
GGACTTCGCCCTGGCGCGCGCCGAGGCCGGAGCCAACGAGGATCTGGTCTTTCTCATGCAGTTTGGCAACCCGGTTGCCG
GGGACGGTGGG------GCGCCCGAGAACACCCCGGCGTACGGCGTGGCCGTGTACAACGTCACCACCGGGGAGTGGCAC
CGCGAGAGCTCGGCGCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCGTCGCGGTGATGGGCGGCTG
GGACCCCAACACCTTCGAGCCCGTGGCGGACGTCAACGTCCTGGACGCCACCACCGGCGTCTGGCGCCGCGGCGCGCCGA
TGCGGTCCGCGCGCTCCTTCTTCGCGTGCGCCGAGGCGGGGGGCAAGATCTATGTCGCCGGCGGGCACGACAAGCTCAAG
AACGCGCTGAAGACGGCCGAGGCGTACGACGCGGAGGCCGACGGCTGGGACCCGCTCCCGGACATGTCGGAGGAGCGCGA
CGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTTGCCGTGAGCGGGTACCGCACGGGGCGCCAGGGAGGGT
TCGAGCGGGACGCCGAGTGGTTCGACCCGGCGACCCGCGAGTGGCGCCGCCTGGAGCGCGTGCGCGCCCCGCCGTCGGCG
GCTCACGTGGTGGTGCGCGGCCGCGTGTGGTGCATCGAGGGCACGGCCGTGATGGAGTGGCGCGGGGAGCGCCGGGGCTG
GCTCGAGGTGGGCCCTTACCCGCCAGGTCTCAAGGCCGGCACGGCGCGCGCGGTCGCCGTCGGCGGCGGCGAGCGCGTCG
TGGTGACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGCTGTGGGTGTTCGACGTGAAGTCCAAGAACTGG
ACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTGGCATCCGTCCGCGTGTGATG------------
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>chr7A_2880
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------------------------------------------------AAGACCATCTCCAACAGATGTGCTAAATAATT
TTTAAAGCGTCGAAATAGTCTTTTTTTAC-GAGCAGCGGAGCGCTGGCTCCAACAGGCGCTGCAAAATATGGCGCGCGCG
AACAACTCCAGCAAGCGCTGCAAAATCTGGCGCATG--CAAGCAACCGGTATTACGATGCAACACATACGAACAATATG-
--------AAACAACATATAGATAAAATTCAAA---------TAGCACAG-TTCAAGTCCAACACCACAAACTAGTCCAT
ACGATACA---AATAAAAATAGATAAAAACGATACTAC-GATGCAAATATACTAGAAACTACTCCTCGTTGT---CG---
TCGTCCTCGGTGGTGTAGTCCGACAACAGAAACGCGTTATCCCACCGAGGATCATTGTCATCAAAGATCTACGCAGATCC
CAGTTCGCACTGTGCTATCGCCAGTGCCTTCC--GC--ACGCCTGTCCGCCCAATCCGCGGCTCGCTACGCCCTCCTCTA
CACCCAGAAGTCGATCTCGGCGGCCACATCCTCAGGGAAGTGTTGGCGCCACTCCGCCATGGCGTACTCGTCCGCCTCAG
CGACGAGGAGGCGGCGCTC-------CCGCCTATGCTGGATGCGGCGGTCCTCGTCGGTGACTAGCCGCGGCGGAGGCGC
GAGATCCTGCGCCTGCTGGCGTGTCTGGGCGTCCGAGAAATTCATCTGTGAACGTGGCCGGTTGAGG--
>chr4D_2897
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-----------------------------------------------------------------GC--GCTAAATAAAT
TTTACAGCGCCGAAATAGCATCTTTTTGC-GCGCAGCAGAGCGCTGGCTCCAGCGGCCGATACAAAATATGGCGCGCGTG
AGCAGCTTCAGCAGGCGCTGCAAAATCTGGCGCGCG--CGAGCAACCGGTACTACGACGCAACACATACGAACAATATG-
--------AAACAACATATAGATAAAATTCAAA---------TAGCATAG-TTCAAGCCCAACACCACAAACTAGTCCAT
ACGATACA---AATAAAAATAGATAAAAACGATACTAC-GATGCAAATATACTAGAAACTACTCCTCGTTGT---CA---
---TCCTCGGTGGTGTAGTCCGACGACAGAAACACTTCATCCCACCGAGGATCATTGTCGTCAAAGGTCGACGCAGATCC
CAGTTCGCACTGCGCAATTGCCAGTGCCTTCA--GCGCATGCTTGTCCGCCCGATCCGCGGCTCGTTGCGCCCTCCTCTG
TGCCCAGAAGTTGTTCTCGGCGGCGACATCCTCCGGGAAGCGCTGGCGCCACTCTGCCGTGGCGTACTCGTCCGCCTCGG
CGACGAGGAGG-------CGGCGCTCCCGCCTACGC-AGATGCGGCGGTCCTAGTCGGTGATTAGCCGCGGCAGAGGCGC
GAGATCCTGCGCCTGCTTGCGCGTACGGGCGTCCGAGAAATTCATCTGTGAACGTGGCCGGTTGAGG--
>chr1B_2897
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-----------------------------------------------------------------GC--GCTAAATAATT
TTTACAGCGGCGAAATATC--TTTTTTGC-GTGCAGCAGACCGCTGGCTCCATCAGCCGCGGCAAAATATGCCGCGCGCG
AGCAGCTTCAGTAGGCGCTGCAAAAAAG---GCGCGCGCGAGCAACCTGTACTACGATGCAACACATACGGACAATATAA
AACAAC-------ATATATAGATAAAATTCAAA---------TAGCATAG-TTCAAGCCCACCACCACAAACTAGTCTAT
ATGATACG---AATAAAAATAGATAAAAATGATACTAC-GATGCAAATATACTAGAAACTAGTCCTTGTTGT---CGTCC
TCCTCCTCGGTGGTATAGTCCGATGATAGAAACGTGTCATCCCACCGAGGATCATTGTCGTGAAAGGTCGACACAGATCC
CAGTTCACACTGCGCTATCGCCAGTGCCTTCC--GCGCATGCCTGTCCACCCGATCCGCG--------------------
-GCCCAGAAGTCGTTCTCGGCGGCGACATCCTCTGGGAAGCCCTGGCGCCACTCCGCCATGACGTACTCGTCCGCCTCGG
CGATGAAGAGG-------C-------CCGCGTACGCTGGATGCGGTGGTCCTCGTCGATGATTGGTCGCGACAGAGGTGC
GAGATCATGCGCCCGCTGGCGCGTCCGGGCGTCCGAGAAATTCATCTGCGAACATGGCCGGTTGAGG--
>chr1D_2898
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------------------------------------------------------------------C--GCTAAATAATT
TTTACAGCGCCGAATT----TTTTTTTGC-ACGCAGCAGATCACTGGCTCCAGCGGCCGCGCCAAAATATG--GCGCGCG
AGCAGCTCCAGTAGGTGCTGCAAAAATG---GCGCG--CGAGCAACCTGTACTACGATGCAACACATACGAACAATATG-
--------AAACAATATATAGATAAAATTCAAA---------TAGCATAG-TTACAGCCCAGCACCACAAACTTGTCCAT
ACCATACA---AATAAAAATAGATAAAAATGATACTAC-GATGCAAATATACTAGAAACTACTCCTCGTTG---TCGTCC
TCCTCCTCGGTGGTGTAGTCCGACGACAGAAATGTGTCATCCCACCGAGGATCATTGTCGTCAAAGGTCGACGCAGATCC
CAGTTCACACTGCGCTATCGCCAGTGCCTTCC--GC-CACGCCTGTCCGCCCGATCCGCGGTTCGCAACGCCCTCCTCTG
CGCCCAGAAGTCGTTCTCGGCGGCGACATCCTCTGGGAAGCGCTGGCGCCACTCCGCCATGACGTACTCGTCTGCCTCGG
CGATGAGGAGG-------CGGCGCTCCCGTGTATGCTAGATGTGGCGGTCCTCGACGGTGATTAGTCGTGGCTGAGGTGC
GAGGTCCTACGCCATCTGGCGCGTCCGGGCGTCCGAGAAATTCATCTGCGAACATGGCCGATTGAGGTG
>chr6D_2905
TAATT---------------------------------------------------------------------------
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-TTACAGTGTTGAAATAGCTTTTTTTTAC-ACGCAGTAGAGCGCTGGCTCCAACGACCGCGGTAAAATATGGCACGCACG
AGCAGCTTAAACAGGCGCTGCAAAAAACGATGCGCA--TGAGCAACCGGTACTACGATGCAACACGCACGAACAATATG-
--------AAACAACATATAGATAAAATTCAAA---------TAGTATAG-TTCAAGCCCAA---CACAAACTAGTCCAT
ACGATACA---AATAAAAATAGATAAAAACGATACTAC-GATGCAAATATACTAGAAACTACTCCTCGTTGTTGTCGTCC
TCCTCCTCGGTGGTGTAGTCCGAGGACAGAAACGCGTCATCCCACCGAGGATCCTTGTCGTCAAAGATCGACGCAGATCC
CAGTTCGCACTGCGCTATCGCCAGTGCCTTCC--GCGCACGCCTGTCCGCCCGATCCGCGGCTCGCAGTGCCCTCCCCTG
CGCCCAGAAGTCGTTCTCGGCGGCGACATCCTCCGGGAAGCGCTAGCGCCACTCCACCATGGCGTACTCGTCCGCTTCGG
CGATGAGGAGG-------CGGTGCTCCCATCTACGCTGGATGC-------------------------------------
----------------TGGCGCGTCC-------------------------------------------
>chr1B_2907
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-----------------------------------------------------------------------------ATT
TTTACAACGCTGAAATAGCCTCTTTTTGC-GTGCAACATAGCGCTGCCTCCAGCGGCCGCTGTAAAATATGGCATGCACG
AGCAGCTCCAGCAGGTGCTGCAAAATCCAC--CGCG--CGAGCAACCGGTACTACGATGCAACACATACGAACAATATG-
--------AAACAACATATAGATAAAATTCAAA---------TAGCATAG-TTCAAGCCCAACACCACAAACTAGTCCAT
ACAATACA---AATAAAAATAGATAAAAACGATACTAC-GATGCAAATATACTAGAAACTACTACTCGTTG---CCGTCC
TCCTCCTCGATAGTGTAGTTCGACGACATAAAGGCGTCATCCCACCGAGGATCATTGTCGTCAAAGGTTGACGCAGATCC
TAGTTCGCACTGCGATATCGCCAGTGCCTTTC--GCACACGCCTGTCCGCCCGATCCGCGGCTCGTTGCGCCCTCCTCTG
CACCCAGAAGATGTTCTCGGCAGCGACATCCTCCGAGAAGCGCTGGCACCACTCAGCCATGGCGTACTCGTCCGCCTCGG
CGATGAGGAGG-------CGGTGTTCCCGCCTACGCTGGATGCGGCGGTCCTCGTTGGTGATTAGTCTCGGCGGAGGCAT
GAGATCCTGCGCCTGCTAGCTCATCCGAGCGTCAGAGAAATTCATCTGCGAACGTGGCCGGTTGAGG--
>chr3B_2909
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-------------------------------------------------------------------------------T
TTTACAGCGTCGAAATAGTGTCTTTTCTA-GCGAAGCAGGGCGCTAGCTCTAGCGCCC-CTGCAAAATTTGGCCCCTGCG
AGCAGCTTCAGCAGGCGCTGCAAAAAAAGGAGCGCG--CGAGCAACCAGTACTATCATGCAACACATATGAATAGCATAT
ACATAAAAAATCAACATATAGATAAAATCCATACGATACAAATAGGCTAG-TTCAAGCCCAACACCACAAACTAGTCCAT
ACGATACAAATAATAAAAATAGATAAAAACGTTACTAC-GATGCAAATATACTAGAAACTACTCCTCATTGT---CG---
TCCTCCTCGGTGGTGTAGTTCGACGGCAGAAACGTGTCATTCCACCGAGGATCATTGTCGTCAAAGATCGACGCCGATCC
CAGTTCGCACTGTGCTATCGCCAGTGCCTTCC--GCGCACGCCTGCCCGCCTGTTCTGCGGCTCGCTGCGCCCTCCTCTA
CACCCAAAAGTCGTTCTCGGCGGCGACATCCTCCGGGAAGCGCTGGCACCACCCCGTCATGGCGTACTCGTCCGCCTCGA
CAATGAGGAGG-------CGGCGCTCCTGCCTATGCTTAATGCGGCGGTCCTCGTTGGTGATTAGCCACGGTGGAGGCGC
GAGGTCCCGCGCCTGCTGGCGCGTCCGGGCGTCCGAGAAATTCATCTACGAATGTGGCCGATTGAGG--
>chr2B_3063
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--------------CATATCGATAAAATTCAAA---------TAGCATAAATTCAAGTCCAACACCACAAGCTAGTGCAT
ACGATACAAA---TAAAAATAGATAAAAACGATACTAC-GATGCAAATATACTACATAAAACTACTTCTTG---TCGTCC
TCCTCCTCGGTGGTGTAGTCCGATGACACAAATGCGCCATCCCACCGAGCATCATTGTCGTCAAAGGCCGGCGCAGATCC
CAGTTCGCACTGCGCTATCGCCAGTGCCTTCC--GCGCACGCCTGTCCGCCCGATCCGCAGCTTGTTGTGCCCTCCTCTA
CACCCAGAAGTCGTTCTCGGCGGCGACAACCTCCGGGAAGCGCTGGCGCCACTCCACCATGGCGTACTCGTCCGCCTCGG
CGATGAGGAGG-------CGGCGCTCCCGCCTACGCTGGATATGGCTGTCCTCGTCGGTGATTAGCCGCCGCGGACGCGC
GAGGTCCTGCGCCTGCTAGCGCGTCCGTGTGTCCAAGAAATTCATCTGCGAATGTGGCCGGTTGAG---
>SNPs
S-----S-SS-----------S--------S-----S-S---------S--------S-S--------------------
--S--S--S---------------------------------------------S-SS--------S---------S---
S----------------SS----------S-----S-S----------------S---------S-SS------------
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----------S---------S--S---S---
------S-----SS-------S---S-----------S-S-------S--------------SS--------S-------
--S-S---------S----SS----------S-S----S--------S----S-------S---S------S--------
S--SSS------S--------S----S-----------------------------S-----S----SSSSSSSSS--S-
-------------------S------S--------------------------------------------------S--
---------S-------S--------------------------------------------------------------
-------S-----S-----------------------------S---------S--------------------------
-------------------------------------------------------------------------S------
---S---------------------------S-------------------S---S-------------S----------
---S-------S-----------------------------S--------------------------------------
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----------S----S------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
-------S----------------------------------------------------------------------S-
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--------------------------------------------------------------------S-----------
---------------------------------------------S----------------------------------
-------------------------------------------------S------------------------------
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------------------------------------------S-------------------------------------
----------------------------S----------------------------------------------S----
--------------S--------------S--------------------------------------------------
-----------------------S--------------------------------------------------SS---S
---------------SSSSSSSSS------------------------------------------------------SS
SSSS----------------S-----------S------------S----------------------------------
----------------S-------------------------S--S--S---------------SSSSS-----------
----------------S--------S------------------------------------S---SS-SS---------
----S-S-S-------------S-SSS--S---SSSSSS---------------------S-------------------
------------------------------S-------------------------------------------------
------S--------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----S------------S--------
------S----------------------S---------------------S--S---S--------S------------
----------S---S------------------------S--------S------------------S------------
--------------------------------------------S-----------------S-------------S---
---S--------------------------------SSS-------------------------S---------------
---S-------------------------S---------------------------------------------S----
-----------SS----------S--------SS-------------S--------SS----------------------
---------------------------------------S------S------------------S--S----S------
--SSSS----------------------------------------------S-------------S-------------
----------S--------S----------S--------------------------------------
>forward_266
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------TGTGACATGACCGATGTGGG------------------------------------------------------
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>reverse_2256
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---------------GTCGGCATAGAAGGCGAAGA---------------------------------------------
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>forward_358
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------------------CACCGCTAAGCAAGAGTGGA------------------------------------------
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>reverse_2257
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----------------TCGGCATAGAAGGCGAAGAG--------------------------------------------
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---------------------------------------------------------------------
>forward_912
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------------CGATGTGTCCTCAGCTCCAA------------------------------------------------
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>reverse_2774
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-----------------------------------------------------GAATGTCAAGCGCAGCTACG-------
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---------------------------------------------------------------------
